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Litwiński M, Wiza-Augustyniak PL, Kryszak Ł, Styburski W. A new financial settlement approach to stabilize profitability of pig production. PLoS One 2024; 19:e0304949. [PMID: 38857229 PMCID: PMC11164379 DOI: 10.1371/journal.pone.0304949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Accepted: 05/21/2024] [Indexed: 06/12/2024] Open
Abstract
This article proposes and evaluates a new solution that ensures the profitability in short and medium terms and stability of the operations of pork livestock producers through improved risk management An innovative tool for distributing the surplus between producers of piglets and finishers is presented. Manuals on pig farming and data combined from multiple sources were used to assess the current market situation, design a profit stabilization tool for pig producers, and evaluate the performance of this solution. We found that implementing the tool reduces the profits variability of finishers and piglets producers by 45% and 30%, respectively, while keeping the long-term average of profits constant.
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Affiliation(s)
- Michał Litwiński
- Department of Sociology and Business Ethics, Poznan University of Economics and Business, Poznan, Poland
- Faculty of Sociology, Adam Mickiewicz University in Poznan, Poznan, Poland
| | | | - Łukasz Kryszak
- Department of Macroeconomics and Agricultural Economics, Poznan University of Economics and Business, Poznan, Poland
| | - Wojciech Styburski
- Department of Economics and Economic Policy in Agribusiness, Poznań University of Life Sciences, Poznan, Poland
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2
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Ghaderi Zefreh M, Doeschl-Wilson AB, Riggio V, Matika O, Pong-Wong R. Exploring the value of genomic predictions to simultaneously improve production potential and resilience of farmed animals. Front Genet 2023; 14:1127530. [PMID: 37252663 PMCID: PMC10213464 DOI: 10.3389/fgene.2023.1127530] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Accepted: 05/02/2023] [Indexed: 05/31/2023] Open
Abstract
Sustainable livestock production requires that animals have a high production potential but are also highly resilient to environmental challenges. The first step to simultaneously improve these traits through genetic selection is to accurately predict their genetic merit. In this paper, we used simulations of sheep populations to assess the effect of genomic data, different genetic evaluation models and phenotyping strategies on prediction accuracies and bias for production potential and resilience. In addition, we also assessed the effect of different selection strategies on the improvement of these traits. Results show that estimation of both traits greatly benefits from taking repeated measurements and from using genomic information. However, the prediction accuracy for production potential is compromised, and resilience estimates tends to be upwards biased, when families are clustered in groups even when genomic information is used. The prediction accuracy was also found to be lower for both traits, resilience and production potential, when the environment challenge levels are unknown. Nevertheless, we observe that genetic gain in both traits can be achieved even in the case of unknown environmental challenge, when families are distributed across a large range of environments. Simultaneous genetic improvement in both traits however greatly benefits from the use of genomic evaluation, reaction norm models and phenotyping in a wide range of environments. Using models without the reaction norm in scenarios where there is a trade-off between resilience and production potential, and phenotypes are collected from a narrow range of environments may result in a loss for one trait. The study demonstrates that genomic selection coupled with reaction-norm models offers great opportunities to simultaneously improve productivity and resilience of farmed animals even in the case of a trade-off.
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Affiliation(s)
- Masoud Ghaderi Zefreh
- The Roslin Institute and R(D)SVS, University of Edinburgh, Edinburgh, United Kingdom
| | | | - Valentina Riggio
- The Roslin Institute and R(D)SVS, University of Edinburgh, Edinburgh, United Kingdom
| | - Oswald Matika
- The Roslin Institute and R(D)SVS, University of Edinburgh, Edinburgh, United Kingdom
- Centre for Tropical Livestock Genetics and Health (CTLGH), The Roslin Institute and R(D)SVS, University of Edinburgh, Edinburgh, United Kingdom
| | - Ricardo Pong-Wong
- The Roslin Institute and R(D)SVS, University of Edinburgh, Edinburgh, United Kingdom
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3
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Balatsky VN, Oliinychenko YK, Saienko AM, Buslyk TV, Bankovska IB, Peka MY, Doran O. Associations of Polymorphisms in Leptin and Leptin Receptor Genes with Meat Quality in Pigs of the Ukrainian Large White Breed. CYTOL GENET+ 2022. [DOI: 10.3103/s0095452722060020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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4
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Sustainable Intensification of Beef Production in the Tropics: The Role of Genetically Improving Sexual Precocity of Heifers. Animals (Basel) 2022; 12:ani12020174. [PMID: 35049797 PMCID: PMC8772995 DOI: 10.3390/ani12020174] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2021] [Revised: 01/07/2022] [Accepted: 01/08/2022] [Indexed: 12/16/2022] Open
Abstract
Simple Summary Tropical pasture-based beef production systems play a vital role in global food security. The importance of promoting sustainable intensification of such systems has been debated worldwide. Demand for beef is growing together with concerns over the impact of its production on the environment. Implementing sustainable livestock intensification programs relies on animal genetic improvement. In tropical areas, the lack of sexual precocity is a bottleneck for cattle efficiency, directly impacting the sustainability of production systems. In the present review we present and discuss the state of the art of genetic evaluation for sexual precocity in Bos indicus beef cattle, covering the definition of measurable traits, genetic parameter estimates, genomic analyses, and a case study of selection for sexual precocity in Nellore breeding programs. Abstract Increasing productivity through continued animal genetic improvement is a crucial part of implementing sustainable livestock intensification programs. In Zebu cattle, the lack of sexual precocity is one of the main obstacles to improving beef production efficiency. Puberty-related traits are complex, but large-scale data sets from different “omics” have provided information on specific genes and biological processes with major effects on the expression of such traits, which can greatly increase animal genetic evaluation. In addition, genetic parameter estimates and genomic predictions involving sexual precocity indicator traits and productive, reproductive, and feed-efficiency related traits highlighted the feasibility and importance of direct selection for anticipating heifer reproductive life. Indeed, the case study of selection for sexual precocity in Nellore breeding programs presented here show that, in 12 years of selection for female early precocity and improved management practices, the phenotypic means of age at first calving showed a strong decreasing trend, changing from nearly 34 to less than 28 months, with a genetic trend of almost −2 days/year. In this period, the percentage of early pregnancy in the herds changed from around 10% to more than 60%, showing that the genetic improvement of heifer’s sexual precocity allows optimizing the productive cycle by reducing the number of unproductive animals in the herd. It has a direct impact on sustainability by better use of resources. Genomic selection breeding programs accounting for genotype by environment interaction represent promising tools for accelerating genetic progress for sexual precocity in tropical beef cattle.
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5
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Tu CF, Chuang CK, Yang TS. The application of new breeding technology based on gene editing in pig industry. Anim Biosci 2022; 35:791-803. [PMID: 34991204 PMCID: PMC9066036 DOI: 10.5713/ab.21.0390] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 12/07/2021] [Indexed: 12/02/2022] Open
Abstract
Genome/gene-editing (GE) techniques, characterized by a low technological barrier, high efficiency, and broad application among organisms, are now being employed not only in medical science but also in agriculture/veterinary science. Different engineered CRISPR/Cas9s have been identified to expand the application of this technology. In pig production, GE is a precise new breeding technology (NBT), and promising outcomes in improving economic traits, such as growth, lean or healthy meat production, animal welfare, and disease resistance, have already been documented and reviewed. These promising achievements in porcine gene editing, including the Myostatin gene knockout (KO) in indigenous breeds to improve lean meat production, the uncoupling protein 1 (UCP1) gene knock-in to enhance piglet thermogenesis and survival under cold stress, the generation of GGTA1 and CMP-N-glycolylneuraminic acid hydroxylase (CMAH) gene double KO (dKO) pigs to produce healthy red meat, and the KO or deletion of exon 7 of the CD163 gene to confer resistance to porcine reproductive and respiratory syndrome virus infection, are described in the present article. Other related approaches for such purposes are also discussed. The current trend of global regulations or legislation for GE organisms is that they are exempted from classification as genetically modified organisms (GMOs) if no exogenes are integrated into the genome, according to product-based and not process-based methods. Moreover, an updated case study in the EU showed that current GMO legislation is not fit for purpose in term of NBTs, which contribute to the objectives of the EU’s Green Deal and biodiversity strategies and even meet the United Nations’ sustainable development goals for a more resilient and sustainable agri-food system. The GE pigs generated via NBT will be exempted from classification as GMOs, and their global valorization and commercialization can be foreseen.
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Affiliation(s)
- Ching-Fu Tu
- Division of Animal Technology, Animal Technology Laboratories, Agricultural Technology Research Institute, Hsinchu City 30093, Taiwan
| | - Chin-Kai Chuang
- Division of Animal Technology, Animal Technology Laboratories, Agricultural Technology Research Institute, Hsinchu City 30093, Taiwan
| | - Tien-Shuh Yang
- Division of Animal Technology, Animal Technology Laboratories, Agricultural Technology Research Institute, Hsinchu City 30093, Taiwan.,Department of Biotechnology and Animal Science, National Ilan University, Yilan City, 26047 Taiwan
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6
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Liu F, Brewster CJ, Gilmour S, Henman DJ, Smits RJ, Luxford BG, Dunshea FR, Pluske JR, Campbell RG. Relationship between energy intake and growth performance and body composition in pigs selected for low backfat thickness. J Anim Sci 2021; 99:6427661. [PMID: 34791287 DOI: 10.1093/jas/skab342] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 11/09/2021] [Indexed: 11/13/2022] Open
Abstract
Genetic selection of pigs over recent decades has sought to reduce carcass fat content to meet consumer demands for lean meat in many countries (e.g.: Australia). Due to the impacts of genetic changes, it is unknown whether the carcass fat measures are still responsive to energy intake. Thus, the present experiment aimed to quantify the relationship between tissue composition and dietary energy intake in finisher pigs selected for low carcass backfat. Intact male and female pigs (n=56 for each sex; PrimegroGenetics, Corowa, NSW, Australia) were fed seven different amounts of an amino acid adequate wheat-based diet containing 14.3 MJ digestible energy (DE)/kg to provide the following daily DE intakes- 25.8, 29.0, 32.6, 35.3, 38.5, 41.5 and 44.2 (ad libitum) MJ DE/d for males, and 25.8, 28.9, 32.0, 35.6, 38.3, 40.9 and 44.5 (ad libitum) MJ DE/d for females between 60 kg and 108 kg live weight. Body composition of anaesthetised pigs was measured using the Dual Energy X-ray Absorptiometry (DXA) method when individual pigs reached 108 kg, and protein, fat and ash deposition rates were calculated. Pigs were slaughtered on the 2nd day post-DXA scan for carcass backfat measurement. The results showed that the carcass backfat thickness (standardized at 83.7 kg carcass) increased by 0.125 mm for every MJ increase in daily DE intake in male pigs (P = 0.004; R2 = 0.130), but carcass backfat of female pigs (standardized at 85.1 kg carcass) was not responsive to daily DE intake. Whole-body fat composition and fat deposition rate increased linearly (both P < 0.01) in male pigs but quadratically (both P < 0.01) in female pigs in response to DE intake. Every MJ increase of daily DE intake increased the rate of daily protein deposition by 3.8 g in intact male pigs (P < 0.001; R2 = 0.781) and by 2.5 g in female pigs (P < 0.001; R2 = 0.643). In conclusion, the selection for low backfat thickness over the last two decades has altered the response of fat deposition and backfat thickness to energy intake, particularly in female pigs. Despite this change, the linear relationship between DE intake and protein deposition rate was maintained in these modern genetics.
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Affiliation(s)
- Fan Liu
- Rivalea Australia Pty Ltd, Corowa, NSW 2646, Australia
| | | | | | | | | | | | - Frank R Dunshea
- Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, Australia.,Faculty of Biological Sciences, The University of Leeds, Leeds, United Kingdom
| | - John R Pluske
- Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, Australia.,Australasian Pork Research Institute Ltd, Willaston, South Australia
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7
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Montagne L, Gilbert H, Muller N, Le Floc'h N. Physiological response to the weaning in two pig lines divergently selected for residual feed intake. J Anim Physiol Anim Nutr (Berl) 2021; 106:802-812. [PMID: 34351031 DOI: 10.1111/jpn.13622] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 07/09/2021] [Accepted: 07/22/2021] [Indexed: 12/24/2022]
Abstract
Breeding efficient pigs is a way to reduce dietary costs and environmental waste. However, optimization of feed efficiency must not be linked to a decrease of the ability of animals to cope with stress, such as the weaning. This study characterizes the response after weaning of pigs from two lines divergently selected for residual feed intake (RFI) during growth. Animals of the low (L) RFI line are more efficient than animals from the high (H) RFI line. Thirty-six piglets from each line weaned at 28 days of age were individually housed and fed a conventional dietary sequence. Their performance, behaviour, health and oxidative status, immune and nutritional parameters were followed during three weeks. Daily feed intake and growth rate of pigs from the LRFI line were 35% and 40% lower compared with HRFI (p < 0.001). Pigs from the LRFI-line had lower total tract apparent digestibility (-6% for OM) and suffered more from undernutrition with a 167 and 55% higher plasmatic concentration of NEFA and urea compared with HRFI (p < 0.01). In the first week after the weaning, they had more diarrhoea and had a higher inflammatory status with concentration of haptoglobin 52% higher (p < 0.001). These piglets then seemed to adapt to the weaning conditions and to recover during the second and third weeks. Both lines had similar zootechnical performance and physiological characteristics at the end of the post-weaning period. To conclude, the physiological responses to the weaning differed between lines. Pigs from the LRFI line, selected for greater feed efficiency, were more sensitive to the weaning stress. They were also more resilient as they finally adapted to the new condition and recovered to show similar performance results as pigs of the HRFI line.
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Affiliation(s)
| | - Hélène Gilbert
- GenPhySE, INRAE, ENVT, Université de Toulouse, Castanet-Tolosan, France
| | - Nelly Muller
- PEGASE, INRAE, Institut Agro, Saint-Gilles, France
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8
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van Staaveren N, Boyle LA, Manzanilla EG, O'Driscoll K, Shalloo L, Díaz JAC. Severe tail lesions in finisher pigs are associated with reduction in annual profit in farrow-to-finish pig farms. Vet Rec 2021; 188:e13. [PMID: 33891723 DOI: 10.1002/vetr.13] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2020] [Revised: 09/11/2020] [Accepted: 11/06/2020] [Indexed: 01/02/2023]
Abstract
OBJECTIVES We investigated the financial impact of different prevalence levels of severe tail lesions (STL) during the finisher stage associated with changes in average daily gain (ADG) in farrow-to-finish pig farms. METHODS Prevalence of STL was estimated for 31 farrow-to-finish pig farms. Regression tree analysis was used to identify a threshold for STL associated with differences in ADG. Then, a financial analysis was carried using the Teagasc Pig Production model. RESULTS A threshold of ≥0.86% prevalence of STL was associated with a 4.8% decrease in ADG which translated into pigs requiring 7 days more to reach target slaughter weight than in farms below the threshold. Reduced ADG meant that farms with higher prevalence of STL used 3.6% more weaner and 1.4% more finisher feed per year increasing feed costs by 1.5%. This reduced mean annual farm profit by 15.1% in farms with higher prevalence of STL. CONCLUSIONS Our results provide an indication of the financial effects of STL in intensive pig production systems. The identified threshold for the prevalence of STL could provide a tangible target for farmers to focus on in developing strategies to reduce tail lesions and allow farmers to complete a cost benefit analysis of controlling STL.
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Affiliation(s)
- Nienke van Staaveren
- Department of Animal Biosciences, Ontario Agricultural College, University of Guelph, Guelph, Ontario, Canada
| | - Laura Ann Boyle
- Pig Development Department, Teagasc Animal and Grassland Research and Innovation Centre, Fermoy, Ireland
| | - Edgar García Manzanilla
- Pig Development Department, Teagasc Animal and Grassland Research and Innovation Centre, Fermoy, Ireland.,School of Veterinary Medicine, University College Dublin, Dublin, Ireland
| | - Keelin O'Driscoll
- Pig Development Department, Teagasc Animal and Grassland Research and Innovation Centre, Fermoy, Ireland
| | - Laurence Shalloo
- Livestock Systems Department, Teagasc Animal and Grassland Research and Innovation Centre, Fermoy, Ireland
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9
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van der Zande LE, Dunkelberger JR, Rodenburg TB, Bolhuis JE, Mathur PK, Cairns WJ, Keyes MC, Eggert JM, Little EA, Dee SA, Knol EF. Quantifying Individual Response to PRRSV Using Dynamic Indicators of Resilience Based on Activity. Front Vet Sci 2020; 7:325. [PMID: 32671109 PMCID: PMC7326935 DOI: 10.3389/fvets.2020.00325] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Accepted: 05/11/2020] [Indexed: 11/13/2022] Open
Abstract
Pigs are faced with various perturbations throughout their lives, some of which are induced by management practices, others by natural causes. Resilience is described as the ability to recover from or cope with a perturbation. Using these data, activity patterns of an individual, as well as deviations from these patterns, can potentially be used to quantify resilience. Dynamic indicators of resilience (DIORs) may measure resilience on a different dimension by calculating variation, autocorrelation and skewness of activity from the absolute activity data. The aim of this study was to investigate the potential of using DIORs of activity, such as average, root mean square error (RMSE), autocorrelation or skewness as indicators of resilience to infection with the Porcine Reproductive and Respiratory Syndrome Virus (PRRSV). For this study, individual activity was obtained from 232 pigs equipped with ear tag accelerometers and inoculated with PRRSV between seven and 9 weeks of age. Clinical scores were assigned to each individual at 13 days post-challenge and used to distinguish between a resilient and non-resilient group. Mortality post-challenge was also recorded. Average, RMSE, autocorrelation and skewness of activity were calculated for the pre- and post-challenge phases, as well as the change in activity level pre- vs. post-challenge (i.e., delta). DIORs pre-challenge were expected to predict resilience to PRRSV in the absence of PRRSV infection, whereas DIORs post-challenge and delta were expected to reflect the effect of the PRRSV challenge. None of the pre-challenge DIORs predicted morbidity or mortality post-challenge. However, a higher RMSE in the 3 days post-challenge and larger change in level and RMSE of activity from pre- to post-challenge tended to increase the probability of clinical signs at day 13 post-infection (poor resilience). A higher skewness post-challenge (tendency) and a larger change in skewness from pre- to post-challenge increased the probability of mortality. A decrease in skewness post-challenge lowered the risk of mortality. The post-challenge DIOR autocorrelation was neither linked to morbidity nor to mortality. In conclusion, results from this study showed that post-challenge DIORs of activity can be used to quantify resilience to PRRSV challenge.
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Affiliation(s)
| | | | - T Bas Rodenburg
- Adaptation Physiology Group, Wageningen University & Research, Wageningen, Netherlands.,Animals in Science and Society, Faculty of Veterinary Medicine, Utrecht University, Utrecht, Netherlands
| | - J Elizabeth Bolhuis
- Adaptation Physiology Group, Wageningen University & Research, Wageningen, Netherlands
| | | | | | | | | | - Erin A Little
- Pipestone Applied Research, Pipestone, MN, United States
| | - Scott A Dee
- Pipestone Applied Research, Pipestone, MN, United States
| | - Egbert F Knol
- Topigs Norsvin Research Center, Beuningen, Netherlands
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10
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Abstract
Improving robustness of farm animals is one of the goals in breeding programmes. However, robustness is a complex trait and not measurable directly. The objective of this study was to quantify and characterize (elements of) robustness in growing pigs. Robustness can be analysed by examining the animal’s response to perturbations. Although the origin of perturbations may not be known, their effect on animal performance can be observed, for example, through changes in voluntary feed intake. A generic model and data analysis procedure was developed (1) to estimate the target trajectory of feed intake, which is the amount of feed that a pig desires to eat when it is not facing any perturbations; (2) to detect potential perturbations, which are deviations of feed intake from the estimated target trajectory; and (3) to characterize and quantify the response of the growing pigs to the perturbations using voluntary feed intake as response criterion. The response of a pig to a perturbation is characterized by four parameters. The start and end times of the perturbation are ‘imposed’ by the perturbing factor, while two other parameters describe the resistance and resilience potential of the pig. One of these describes the immediate reduction in daily feed intake at the start of the perturbation (i.e., a ‘resistance’ trait) while another parameter describes the capacity of the pig to adapt to the perturbation through compensatory feed intake to rejoin the target trajectory of feed intake (i.e., a ‘resilience’ trait). The procedure has been employed successfully to identify the target trajectory of feed intake in growing pigs and to quantify the pig’s response to a perturbation.
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11
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Guy SZY, Li L, Thomson PC, Hermesch S. Quantifying the health challenges in an Australian piggery using medication records for the definition of disease resilience1. J Anim Sci 2019; 97:1076-1089. [PMID: 30715349 DOI: 10.1093/jas/skz025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 01/13/2019] [Indexed: 01/04/2023] Open
Abstract
Disease resilience is the ability to maintain performance and health, despite infection challenges in the environment. The evaluation of disease resilience requires measures of environment infection challenges, along with other environmental challenges. The overall objective of this study was to define disease resilience using pedigree, production, and medication records from an Australian herd of Large White pigs. The extent to which the infection challenges were captured by environmental descriptors based on contemporary group (CG) estimates of growth was assessed (n = 8,835). There were moderately negative linear relationships (r = -0.29, p = 0.08) between CG estimates (39 CGs) of growth and the frequency of medicated pigs (n = 812 medicated pigs). This suggests that CG estimates of growth partly capture health challenges. However, because the health challenges were not of the pathogenic nature for this herd, these environmental descriptors may not be appropriate for the evaluation of disease resilience. Subsequently, an alternative approach to select for health was provided, where health was defined as a binary outcome of medication status, fitted in a generalized linear mixed sire model. Two health-trait definitions were explored, which differed in the number of control (nonmedicated) pigs per litter. The 'reduced-control' health trait had a representative sample of littermates with available performance records, and the 'full-control' health trait included all piglets weaned per litter (i.e., performance-tested and non-performance-tested pigs). All 812 medicated pigs had performance records available. The remaining 8,023 pigs in the reduced-control and 21,352 pigs in the full-control health traits were assumed to have not been medicated (controls). Male pigs from litters with a higher number of postweaning deaths were more likely to be medicated for both health traits. Heritability was consistent for both trait definitions, at 0.06 ± 0.04 (± SE) (reduced-control) and 0.04 ± 0.03 (full-control). While results may be specific for individual herds depending on health status, these estimates align with those presented in literature for other health traits. Together, these results demonstrate that routinely collected medication records may be useful for pig breeding programs and their economic importance and genetic background should be explored further.
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Affiliation(s)
- Sarita Z Y Guy
- School of Life and Environmental Sciences, University of Sydney, Camden NSW, Australia.,Animal Genetics and Breeding Unit, a Joint Venture of NSW Department of Primary Industries and the University of New England, University of New England, Armidale NSW, Australia
| | - Li Li
- Animal Genetics and Breeding Unit, a Joint Venture of NSW Department of Primary Industries and the University of New England, University of New England, Armidale NSW, Australia
| | - Peter C Thomson
- School of Life and Environmental Sciences, University of Sydney, Camden NSW, Australia.,Animal Genetics and Breeding Unit, a Joint Venture of NSW Department of Primary Industries and the University of New England, University of New England, Armidale NSW, Australia
| | - Susanne Hermesch
- Animal Genetics and Breeding Unit, a Joint Venture of NSW Department of Primary Industries and the University of New England, University of New England, Armidale NSW, Australia
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12
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Nakov D, Hristov S, Stankovic B, Pol F, Dimitrov I, Ilieski V, Mormede P, Hervé J, Terenina E, Lieubeau B, Papanastasiou DK, Bartzanas T, Norton T, Piette D, Tullo E, van Dixhoorn IDE. Methodologies for Assessing Disease Tolerance in Pigs. Front Vet Sci 2019; 5:329. [PMID: 30687721 PMCID: PMC6334556 DOI: 10.3389/fvets.2018.00329] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Accepted: 12/11/2018] [Indexed: 12/11/2022] Open
Abstract
Features of intensive farming can seriously threaten pig homeostasis, well-being and productivity. Disease tolerance of an organism is the adaptive ability in preserving homeostasis and at the same time limiting the detrimental impact that infection can inflict on its health and performance without affecting pathogen burden per se. While disease resistance (DRs) can be assessed measuring appropriately the pathogen burden within the host, the tolerance cannot be quantified easily. Indeed, it requires the assessment of the changes in performance as well as the changes in pathogen burden. In this paper, special attention is given to criteria required to standardize methodologies for assessing disease tolerance (DT) in respect of infectious diseases in pigs. The concept is applied to different areas of expertise and specific examples are given. The basic physiological mechanisms of DT are reviewed. Disease tolerance pathways, genetics of the tolerance-related traits, stress and disease tolerance, and role of metabolic stress in DT are described. In addition, methodologies based on monitoring of growth and reproductive performance, welfare, emotional affective states, sickness behavior for assessment of disease tolerance, and methodologies based on the relationship between environmental challenges and disease tolerance are considered. Automated Precision Livestock Farming technologies available for monitoring performance, health and welfare-related measures in pig farms, and their limitations regarding DT in pigs are also presented. Since defining standardized methodologies for assessing DT is a serious challenge for biologists, animal scientists and veterinarians, this work should contribute to improvement of health, welfare and production in pigs.
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Affiliation(s)
- Dimitar Nakov
- Faculty of Agricultural Sciences and Food, University Ss. Cyril and Methodius in Skopje, Skopje, Macedonia
| | - Slavcha Hristov
- Faculty of Agriculture, University of Belgrade, Belgrade, Serbia
| | | | - Françoise Pol
- Agence Nationale de Sécurité Sanitaire (ANSES), Université Bretagne-Loire, Ploufragan, France
| | - Ivan Dimitrov
- Department of Animal Breeding, Agricultural Institute, Stara Zagora, Bulgaria
| | - Vlatko Ilieski
- Faculty of Veterinary Medicine, University Ss. Cyril and Methodius in Skopje, Skopje, Macedonia
| | - Pierre Mormede
- GenPhySE, Université de Toulouse, INRA, ENVT, Castanet Tolosan, France
| | - Julie Hervé
- IECM, INRA, Oniris, Université Bretagne Loire, Nantes, France
| | - Elena Terenina
- GenPhySE, Université de Toulouse, INRA, ENVT, Castanet Tolosan, France
| | | | - Dimitrios K Papanastasiou
- Centre for Research and Technology Hellas, Institute of Bio-Economy and Agri-Technology, Volos, Greece
| | - Thomas Bartzanas
- Centre for Research and Technology Hellas, Institute of Bio-Economy and Agri-Technology, Volos, Greece
| | | | | | - Emanuela Tullo
- Department of Environmental Science and Policy, Milan, Italy
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13
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Gunia M, David I, Hurtaud J, Maupin M, Gilbert H, Garreau H. Genetic Parameters for Resistance to Non-specific Diseases and Production Traits Measured in Challenging and Selection Environments; Application to a Rabbit Case. Front Genet 2018; 9:467. [PMID: 30386376 PMCID: PMC6198044 DOI: 10.3389/fgene.2018.00467] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2018] [Accepted: 09/24/2018] [Indexed: 11/13/2022] Open
Abstract
Breeding for disease resistance is a challenging but increasingly necessary objective to overcome the issues with the reduced use of antibiotics and growing concern for animal welfare while limiting economic losses. However, implementing such strategies is a complex process because animals face numerous diseases, and the environments on selection farms differ from those on commercial farms. We evaluated whether selection for resistance to non-specific diseases based on a single visual record in selection (S) and challenging (Ch) environments is possible. Records from 23,773 purebred rabbits born between 2012 and 2016 were used in this study. After weaning (at 32 days of age), 17,712 rabbits were raised in the S environment and 6,061 sibs were raised in the Ch environment. Clinical signs of disease were recorded for all animals at the end of the test, at a single time point, at 70 or 80 days of age. The causes of mortality occurring before the end of the test were also recorded. Three disease traits were analyzed: signs of respiratory disease, signs of digestive disease, and a composite trait (Resist) taking into account signs of digestive, respiratory and various infectious diseases. This latter composite trait is proposed to capture the global resistance to disease. All disease traits were binary, with 0 being the absence of symptoms. Two production traits were also recorded: the number of kits born alive (4,121 litters) and the weaning weight (13,090 rabbits). Disease traits were analyzed with animal threshold models, assuming that traits are different in the two environments. Bivariate analyses were carried out using linear animal models. The heritabilities of the disease traits ranged from 0.04 ± 0.01 to 0.11 ± 0.03. The genetic correlations between disease traits in both environments were below unity (≤ 0.84), indicating genotype by environment interactions. Most of the genetic correlations between disease and production traits were not significantly different from zero, except between the weaning weight and Resist_S, with a favorable correlation of -0.34 ± 0.12. Given these genetic parameters, for the same level of exposure of rabbits to pathogens, the expected response to selection is a reduction of disease incidence of 4-6% per generation.
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Affiliation(s)
- Mélanie Gunia
- GenPhySE, INRA, ENVT, Université de Toulouse, Castanet Tolosan, France
| | - Ingrid David
- GenPhySE, INRA, ENVT, Université de Toulouse, Castanet Tolosan, France
| | | | | | - Hélène Gilbert
- GenPhySE, INRA, ENVT, Université de Toulouse, Castanet Tolosan, France
| | - Hervé Garreau
- GenPhySE, INRA, ENVT, Université de Toulouse, Castanet Tolosan, France
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14
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Pluske JR, Kim JC, Black JL. Manipulating the immune system for pigs to optimise performance. ANIMAL PRODUCTION SCIENCE 2018. [DOI: 10.1071/an17598] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Disease and enhanced microbial load are considered to be major factors limiting the performance and overall efficiency of feed use by pigs in Australian piggeries. It is recognised that pigs exposed to conventional housing systems with high microbial loads grow 10–20% more slowly than do gnotobiotic pigs or pigs kept in ‘clean’ environments. Consequently, a proportion of pigs in any production cycle are continuously being challenged by their immediate environment, which can cause an immune response to be mounted. Such a process is physiologically expensive in terms of energy and protein (comprised of amino acids), with, for example, the enhanced rate of protein turnover associated with the production of immune cells, antibodies and acute-phase proteins increasing energy expenditure by 10–15% of maintenance needs and protein requirements by 7–10%. The requirements for lysine, tryptophan, sulfur-containing amino acids and threonine can be increased by a further 10%. The over-stimulation of the immune response with excess production of pro-inflammatory cytokines causes excessive production primarily of the prostaglandin E2 (PGE2), which contributes to anorexia, fever and increased proteolysis, and a concomitant reduction in pig performance. Prostaglandin E2 is produced from dietary and cell-membrane phospholipids via secretory phospholipase A2 (sPLA2) to produce arachidonic acid, which is catalysed by the COX-2 enzyme. Negating the negative effects of PGE2 appears not to adversely affect the ability of the immune system to combat pathogens, but improves pig performance. There are negative outcomes for pig health and productivity through both under- and over-stimulation of the immune response. This review briefly outlines the impact of immune stimulation on pigs and discusses strategies to optimise the immune response for pig health and performance.
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15
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Dou S, Villa-Vialaneix N, Liaubet L, Billon Y, Giorgi M, Gilbert H, Gourdine JL, Riquet J, Renaudeau D. 1HNMR-Based metabolomic profiling method to develop plasma biomarkers for sensitivity to chronic heat stress in growing pigs. PLoS One 2017; 12:e0188469. [PMID: 29176781 PMCID: PMC5703499 DOI: 10.1371/journal.pone.0188469] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2017] [Accepted: 11/07/2017] [Indexed: 11/19/2022] Open
Abstract
The negative impact of heat stress (HS) on the production performances in pig faming is of particular concern. Novel diagnostic methods are needed to predict the robustness of pigs to HS. Our study aimed to assess the reliability of blood metabolome to predict the sensitivity to chronic HS of 10 F1 (Large White × Creole) sire families (SF) reared in temperate (TEMP) and in tropical (TROP) regions (n = 56±5 offsprings/region/SF). Live body weight (BW) and rectal temperature (RT) were recorded at 23 weeks of age. Average daily feed intake (AFDI) and average daily gain were calculated from weeks 11 to 23 of age, together with feed conversion ratio. Plasma blood metabolome profiles were obtained by Nuclear Magnetic Resonance spectroscopy (1HNMR) from blood samples collected at week 23 in TEMP. The sensitivity to hot climatic conditions of each SF was estimated by computing a composite index of sensitivity (Isens) derived from a linear combination of t statistics applied to familial BW, ADFI and RT in TEMP and TROP climates. A model of prediction of sensitivity was established with sparse Partial Least Square Discriminant Analysis (sPLS-DA) between the two most robust SF (n = 102) and the two most sensitive ones (n = 121) using individual metabolomic profiles measured in TEMP. The sPLS-DA selected 29 buckets that enabled 78% of prediction accuracy by cross-validation. On the basis of this training, we predicted the proportion of sensitive pigs within the 6 remaining families (n = 337). This proportion was defined as the predicted membership of families to the sensitive category. The positive correlation between this proportion and Isens (r = 0.97, P < 0.01) suggests that plasma metabolome can be used to predict the sensitivity of pigs to hot climate.
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Affiliation(s)
- Samir Dou
- PEGASE, INRA, Agrocampus Ouest, St Gilles, France
| | | | - Laurence Liaubet
- GenPhySE, INRA, Université de Toulouse, INP, ENSAT, ENVT, Castanet Tolosan, France
| | - Yvon Billon
- PTEA, INRA, Petit-Bourg (Guadeloupe), France
| | | | - Hélène Gilbert
- GenPhySE, INRA, Université de Toulouse, INP, ENSAT, ENVT, Castanet Tolosan, France
| | | | - Juliette Riquet
- GenPhySE, INRA, Université de Toulouse, INP, ENSAT, ENVT, Castanet Tolosan, France
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16
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Gilbert H, Billon Y, Brossard L, Faure J, Gatellier P, Gondret F, Labussière E, Lebret B, Lefaucheur L, Le Floch N, Louveau I, Merlot E, Meunier-Salaün MC, Montagne L, Mormede P, Renaudeau D, Riquet J, Rogel-Gaillard C, van Milgen J, Vincent A, Noblet J. Review: divergent selection for residual feed intake in the growing pig. Animal 2017; 11:1427-1439. [PMID: 28118862 PMCID: PMC5561440 DOI: 10.1017/s175173111600286x] [Citation(s) in RCA: 71] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2016] [Accepted: 12/13/2016] [Indexed: 12/22/2022] Open
Abstract
This review summarizes the results from the INRA (Institut National de la Recherche Agronomique) divergent selection experiment on residual feed intake (RFI) in growing Large White pigs during nine generations of selection. It discusses the remaining challenges and perspectives for the improvement of feed efficiency in growing pigs. The impacts on growing pigs raised under standard conditions and in alternative situations such as heat stress, inflammatory challenges or lactation have been studied. After nine generations of selection, the divergent selection for RFI led to highly significant (P<0.001) line differences for RFI (-165 g/day in the low RFI (LRFI) line compared with high RFI line) and daily feed intake (-270 g/day). Low responses were observed on growth rate (-12.8 g/day, P<0.05) and body composition (+0.9 mm backfat thickness, P=0.57; -2.64% lean meat content, P<0.001) with a marked response on feed conversion ratio (-0.32 kg feed/kg gain, P<0.001). Reduced ultimate pH and increased lightness of the meat (P<0.001) were observed in LRFI pigs with minor impact on the sensory quality of the meat. These changes in meat quality were associated with changes of the muscular energy metabolism. Reduced maintenance energy requirements (-10% after five generations of selection) and activity (-21% of time standing after six generations of selection) of LRFI pigs greatly contributed to the gain in energy efficiency. However, the impact of selection for RFI on the protein metabolism of the pig remains unclear. Digestibility of energy and nutrients was not affected by selection, neither for pigs fed conventional diets nor for pigs fed high-fibre diets. A significant improvement of digestive efficiency could likely be achieved by selecting pigs on fibre diets. No convincing genetic or blood biomarker has been identified for explaining the differences in RFI, suggesting that pigs have various ways to achieve an efficient use of feed. No deleterious impact of the selection on the sow reproduction performance was observed. The resource allocation theory states that low RFI may reduce the ability to cope with stressors, via the reduction of a buffer compartment dedicated to responses to stress. None of the experiments focussed on the response of pigs to stress or challenges could confirm this theory. Understanding the relationships between RFI and responses to stress and energy demanding processes, as such immunity and lactation, remains a major challenge for a better understanding of the underlying biological mechanisms of the trait and to reconcile the experimental results with the resource allocation theory.
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Affiliation(s)
- H. Gilbert
- GenPhySE, INRA, INP,
ENSAT, Université de Toulouse,
31326 Castanet-Tolosan, France
| | - Y. Billon
- GenESI, INRA, 17700
Surgères, France
| | - L. Brossard
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - J. Faure
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - P. Gatellier
- QuaPA, INRA, 63122 Saint
Genès-Champanelle, France
| | - F. Gondret
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - E. Labussière
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - B. Lebret
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - L. Lefaucheur
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - N. Le Floch
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - I. Louveau
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - E. Merlot
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | | | - L. Montagne
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - P. Mormede
- GenPhySE, INRA, INP,
ENSAT, Université de Toulouse,
31326 Castanet-Tolosan, France
| | - D. Renaudeau
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - J. Riquet
- GenPhySE, INRA, INP,
ENSAT, Université de Toulouse,
31326 Castanet-Tolosan, France
| | - C. Rogel-Gaillard
- GABI, INRA,
AgroParisTech, Université Paris-Saclay,
78350 Jouy-en-Josas Cedex, France
| | - J. van Milgen
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - A. Vincent
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
| | - J. Noblet
- PEGASE, INRA, Agrocampus
Ouest, 35590 Saint-Gilles, France
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17
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Silalahi P, Tribout T, Prunier A, Billon Y, Gogué J, Bidanel JP. Estimation of the effects of selection on French Large White reproductive performance using frozen semen. J Anim Sci 2017; 94:3655-3662. [PMID: 27898911 DOI: 10.2527/jas.2016-0540] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Genetic trends for male and female sexual development and components of litter size and weight at birth (LB) as well as traits related to sow lifetime productivity were estimated in a French Large White (LW) pig population using frozen semen. Two experimental groups (EXP = L77 and L98) were produced by inseminating LW sows with either stored frozen semen from 17 LW boars born in 1977 (EXP = L77) or with semen from 23 LW boars born in 1998 (EXP = L98). In each group, about 100 males were measured for testicular development and bulbo-urethral gland development, and 90 gilts were checked for puberty, among which about 50 gilts were measured for their first ovulation rate at puberty (ORP). The females were then mated to 15 randomly chosen males for each group for 6 successive parities and measured for total number born (TNB), number born alive (NBA), litter weight at birth (LWB), and interval from weaning to first estrus as well as ovulation rate at fertilization (ORF = ovulation rate of gestating sows) on a subset of litters. The data were analyzed using mixed linear models including the fixed effects of EXP, of finishing (sexual development traits) or farrowing group, and parity (LB traits); the random effects of birth litter (sexual development traits) or sow (LB traits); and, when relevant, age or BW as covariates. The homogeneity of residual variances across EXP was also tested. For each trait, the genetic trend was estimated as twice the difference between L98 and L77. Limited differences were observed for sexual development traits, except for ORF, which increased by 0.17 ± 0.06/yr. The residual SD of NBA (2.7 vs. 2.0; = 0.004) and LWB (3.1 vs. 2.5; = 0.03) were larger in L98 sows than in L77 sows. Positive trends were observed for all litter traits (0.22 ± 0.07 ova, 0.12 ± 0.04 piglet, 0.09 ± 0.04 piglet, and 0.23 ± 0.06 kg/yr for ORF, TNB, NBA, and LWB, respectively) but at the expense of a degradation of prenatal and farrowing survival. A negative trend was also observed for length of productive life (-8.9 ± 3.9 d/yr). These results suggest that gains in productivity were associated with a loss of robustness.
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