1
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Ruskin J, Sachs RK, Wang M, Dekeyser R, Lew Z, Williams P, Hwang H, Majumdar A, Dudding T, Lectka T. Metal Ion-Induced Large Fragment Deactivation: A Different Strategy for Site-Selectivity in a Complex Molecule. Angew Chem Int Ed Engl 2024; 63:e202317070. [PMID: 38063469 DOI: 10.1002/anie.202317070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Indexed: 12/23/2023]
Abstract
Complex natural product functionalizations generally involve the use of highly engineered reagents, catalysts, or enzymes to react exclusively at a desired site through lowering of a select transition state energy. In this communication, we report a new, complementary strategy in which all transition states representing undesirable sites in a complex ionophore substrate are simultaneously energetically increased through the chelation of a metal ion to the large fragment we wish to neutralize. In the case of an electrophilic, radical based fluorination reaction, charge repulsion (electric field effects), induced steric effects, and electron withdrawal provide the necessary deactivation and proof of principle to afford a highly desirable natural product derivative. We envisage that many other electrophilic or charge based synthetic methods may be amenable to this approach as well.
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Affiliation(s)
- Jonah Ruskin
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
| | - Roseann K Sachs
- Department of Chemistry and Biochemistry, Messiah University, One University Avenue, Mechanicsburg, PA 17055, USA
| | - Muyuan Wang
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
| | - Roxanne Dekeyser
- Department of Chemistry, Brock University, St. Catharines, Ontario, L2S3A1, Canada
| | - Zachary Lew
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
| | - Phoebe Williams
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
| | - Habin Hwang
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
| | - Ananya Majumdar
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
| | - Travis Dudding
- Department of Chemistry, Brock University, St. Catharines, Ontario, L2S3A1, Canada
| | - Thomas Lectka
- Department of Chemistry, Johns Hopkins University, 3400N. Charles St, Baltimore, MD 21218, USA
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2
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Lv X, Su F, Long H, Lu F, Zeng Y, Liao M, Che F, Wu X, Chi YR. Carbene organic catalytic planar enantioselective macrolactonization. Nat Commun 2024; 15:958. [PMID: 38302464 PMCID: PMC10834540 DOI: 10.1038/s41467-024-45218-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 01/18/2024] [Indexed: 02/03/2024] Open
Abstract
Macrolactones exhibit distinct conformational and configurational properties and are widely found in natural products, medicines, and agrochemicals. Up to now, the major effort for macrolactonization is directed toward identifying suitable carboxylic acid/alcohol coupling reagents to address the challenges associated with macrocyclization, wherein the stereochemistry of products is usually controlled by the substrate's inherent chirality. It remains largely unexplored in using catalysts to govern both macrolactone formation and stereochemical control. Here, we disclose a non-enzymatic organocatalytic approach to construct macrolactones bearing chiral planes from achiral substrates. Our strategy utilizes N-heterocyclic carbene (NHC) as a potent acylation catalyst that simultaneously mediates the macrocyclization and controls planar chirality during the catalytic process. Macrolactones varying in ring sizes from sixteen to twenty members are obtained with good-to-excellent yields and enantiomeric ratios. Our study shall open new avenues in accessing macrolactones with various stereogenic elements and ring structures by using readily available small-molecule catalysts.
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Affiliation(s)
- Xiaokang Lv
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Fen Su
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Hongyan Long
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Fengfei Lu
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Yukun Zeng
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Minghong Liao
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Fengrui Che
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China
| | - Xingxing Wu
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China.
| | - Yonggui Robin Chi
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang, 550025, China.
- School of chemistry, chemical engineering, and biotechnology, Nanyang Technological University, Singapore, 637371, Singapore.
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3
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Guo J, Duan Y, Jia Y, Zhao Z, Gao X, Liu P, Li F, Chen H, Ye Y, Liu Y, Zhao M, Tang Z, Liu Y. Biomimetic chiral hydrogen-bonded organic-inorganic frameworks. Nat Commun 2024; 15:139. [PMID: 38167785 PMCID: PMC10762213 DOI: 10.1038/s41467-023-43700-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 11/16/2023] [Indexed: 01/05/2024] Open
Abstract
Assembly ubiquitously occurs in nature and gives birth to numerous functional biomaterials and sophisticated organisms. In this work, chiral hydrogen-bonded organic-inorganic frameworks (HOIFs) are synthesized via biomimicking the self-assembly process from amino acids to proteins. Enjoying the homohelical configurations analogous to α-helix, the HOIFs exhibit remarkable chiroptical activity including the chiral fluorescence (glum = 1.7 × 10-3) that is untouched among the previously reported hydrogen-bonded frameworks. Benefitting from the dynamic feature of hydrogen bonding, HOIFs enable enantio-discrimination of chiral aliphatic substrates with imperceivable steric discrepancy based on fluorescent change. Moreover, the disassembled HOIFs after recognition applications are capable of being facilely regenerated and self-purified via aprotic solvent-induced reassembly, leading to at least three consecutive cycles without losing the enantioselectivity. The underlying mechanism of chirality bias is decoded by the experimental isothermal titration calorimetry together with theoretic simulation.
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Affiliation(s)
- Jun Guo
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, 300387, Tianjin, P. R. China.
| | - Yulong Duan
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, 300387, Tianjin, P. R. China
| | - Yunling Jia
- School of Materials Science and Engineering, Tiangong University, 300387, Tianjin, P. R. China
| | - Zelong Zhao
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, 300387, Tianjin, P. R. China
| | - Xiaoqing Gao
- Wenzhou Key Laboratory of Biomaterials and Engineering, Wenzhou Institute, University of Chinese Academy of Sciences, 325000, Wenzhou, P. R. China
| | - Pai Liu
- School of Materials Science and Engineering, Tiangong University, 300387, Tianjin, P. R. China
| | - Fangfang Li
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, 300387, Tianjin, P. R. China
| | - Hongli Chen
- School of Materials Science and Engineering, Tiangong University, 300387, Tianjin, P. R. China
| | - Yutong Ye
- School of Materials Science and Engineering, Tiangong University, 300387, Tianjin, P. R. China
| | - Yujiao Liu
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, 300387, Tianjin, P. R. China
| | - Meiting Zhao
- Tianjin Key Laboratory of Molecular Optoelectronic Sciences, Department of Chemistry, Institute of Molecular Aggregation Science, Tianjin University, 300072, Tianjin, P. R. China.
| | - Zhiyong Tang
- CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 100190, Beijing, P. R. China.
| | - Yi Liu
- State Key Laboratory of Separation Membranes and Membrane Processes, School of Chemistry, Tiangong University, 300387, Tianjin, P. R. China.
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4
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Chao Y, Subramaniam M, Namitharan K, Zhu Y, Koolma V, Hao Z, Li S, Wang Y, Hudoynazarov I, Miloserdov FM, Zuilhof H. Synthesis of Large Macrocycles with Chiral Sulfur Centers via Enantiospecific SuFEx and SuPhenEx Click Reactions. J Org Chem 2023; 88:15658-15665. [PMID: 37903243 PMCID: PMC10660663 DOI: 10.1021/acs.joc.3c01656] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Revised: 09/26/2023] [Accepted: 10/05/2023] [Indexed: 11/01/2023]
Abstract
Here we report the first asymmetric synthesis of large chiral macrocycles with chiral sulfur atoms. Building on stereospecific SuFEx and SuPhenEx click chemistries, this approach utilizes disulfonimidoyl fluorides and disulfonimidoyl p-nitrophenolates─which are efficient building blocks with two chiral sulfur centers, and diphenols to efficiently form novel S-O bonds. Characteristic results include the enantiospecific one-step synthesis of rings consisting of 21-58 members and characterization of both enantiomers (R,R and S,S) by e.g. X-ray crystallography.
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Affiliation(s)
- Yang Chao
- School
of Pharmaceutical Science and Technology, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Muthusamy Subramaniam
- Laboratory
of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands
| | - Kayambu Namitharan
- Laboratory
of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands
| | - Yumei Zhu
- School
of Pharmaceutical Science and Technology, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Victor Koolma
- Laboratory
of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands
| | - Zitong Hao
- School
of Pharmaceutical Science and Technology, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Shikang Li
- School
of Pharmaceutical Science and Technology, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Yaxin Wang
- School
of Pharmaceutical Science and Technology, Tianjin University, 92 Weijin Road, Tianjin 300072, China
| | - Ilyos Hudoynazarov
- Division
of Organic Synthesis and Applied Chemistry, National University of Uzbekistan, Tashkent 100174, Uzbekistan
| | - Fedor M. Miloserdov
- Laboratory
of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands
| | - Han Zuilhof
- School
of Pharmaceutical Science and Technology, Tianjin University, 92 Weijin Road, Tianjin 300072, China
- Laboratory
of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE Wageningen, The Netherlands
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5
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Strassfeld DA, Chen CY, Park HS, Phan DQ, Yu JQ. Hydrogen-bond-acceptor ligands enable distal C(sp 3)-H arylation of free alcohols. Nature 2023; 622:80-86. [PMID: 37674074 PMCID: PMC11139439 DOI: 10.1038/s41586-023-06485-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 07/26/2023] [Indexed: 09/08/2023]
Abstract
The functionalization of C-H bonds in organic molecules is one of the most direct approaches for chemical synthesis. Recent advances in catalysis have allowed native chemical groups such as carboxylic acids, ketones and amines to control and direct C(sp3)-H activation1-4. However, alcohols, among the most common functionalities in organic chemistry5, have remained intractable because of their low affinity for late transition-metal catalysts6,7. Here we describe ligands that enable alcohol-directed arylation of δ-C(sp3)-H bonds. We use charge balance and a secondary-coordination-sphere hydrogen-bonding interaction-evidenced by structure-activity relationship studies, computational modelling and crystallographic data-to stabilize L-type hydroxyl coordination to palladium, thereby facilitating the assembly of the key C-H cleavage transition state. In contrast to previous studies in C-H activation, in which secondary interactions were used to control selectivity in the context of established reactivity8-13, this report demonstrates the feasibility of using secondary interactions to enable challenging, previously unknown reactivity by enhancing substrate-catalyst affinity.
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Affiliation(s)
| | - Chia-Yu Chen
- Department of Chemistry, The Scripps Research Institute, La Jolla, CA, USA
| | - Han Seul Park
- Department of Chemistry, The Scripps Research Institute, La Jolla, CA, USA
| | - D Quang Phan
- Department of Chemistry, The Scripps Research Institute, La Jolla, CA, USA
| | - Jin-Quan Yu
- Department of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.
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6
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Yoon H, Galls A, Rozema SD, Miller SJ. Atroposelective Desymmetrization of Resorcinol-Bearing Quinazolinones via Cu-Catalyzed C-O Bond Formation. Org Lett 2022; 24:762-766. [PMID: 35007090 PMCID: PMC8968294 DOI: 10.1021/acs.orglett.1c04266] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Enantioselective Cu-catalyzed C-O cross coupling reactions yielding atropisomeric resorcinol-bearing quinazolinones have been developed. Utilizing a new guanidinylated dimeric peptidic ligand, a set of products were generated in good yields with excellent stereocontrol. The transformation was readily scalable, and a range of product derivatizations were performed.
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Affiliation(s)
- Hyung Yoon
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Alexandra Galls
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Soren D. Rozema
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Scott J. Miller
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
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