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For: Georis I, Tate JJ, Cooper TG, Dubois E. Nitrogen-responsive regulation of GATA protein family activators Gln3 and Gat1 occurs by two distinct pathways, one inhibited by rapamycin and the other by methionine sulfoximine. J Biol Chem 2011;286:44897-912. [PMID: 22039046 DOI: 10.1074/jbc.m111.290577] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
Number Cited by Other Article(s)
1
Georis I, Ronsmans A, Vierendeels F, Dubois E. Differing SAGA module requirements for NCR-sensitive gene transcription in yeast. Yeast 2024;41:207-221. [PMID: 37357465 DOI: 10.1002/yea.3885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Revised: 04/24/2023] [Accepted: 05/25/2023] [Indexed: 06/27/2023]  Open
2
Isabelle G, Mohammad FK, Evi Z, Fabienne V, Martine R, Evelyne D. Glutamine transport as a possible regulator of nitrogen catabolite repression in Saccharomyces cerevisiae. Yeast 2022;39:493-507. [PMID: 35942513 DOI: 10.1002/yea.3809] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 07/19/2022] [Accepted: 08/03/2022] [Indexed: 11/08/2022]  Open
3
Tate JJ, Marsikova J, Vachova L, Palkova Z, Cooper TG. Effects of abolishing Whi2 on the proteome and nitrogen catabolite repression-sensitive protein production. G3 (BETHESDA, MD.) 2022;12:jkab432. [PMID: 35100365 PMCID: PMC9210300 DOI: 10.1093/g3journal/jkab432] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Accepted: 12/08/2021] [Indexed: 11/17/2022]
4
Tate JJ, Rai R, De Virgilio C, Cooper TG. N- and C-terminal Gln3-Tor1 interaction sites: one acting negatively and the other positively to regulate nuclear Gln3 localization. Genetics 2021;217:iyab017. [PMID: 33857304 PMCID: PMC8049557 DOI: 10.1093/genetics/iyab017] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Accepted: 01/24/2021] [Indexed: 12/31/2022]  Open
5
Zhu J, Song S, Sun Z, Lian L, Shi L, Ren A, Zhao M. Regulation of glutamine synthetase activity by transcriptional and posttranslational modifications negatively influences ganoderic acid biosynthesis in Ganoderma lucidum. Environ Microbiol 2021;23:1286-1297. [PMID: 33438292 DOI: 10.1111/1462-2920.15400] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Revised: 12/15/2020] [Accepted: 01/09/2021] [Indexed: 12/01/2022]
6
Zou X, Li S, Wang P, Li B, Feng Y, Yang ST. Sustainable production and biomedical application of polymalic acid from renewable biomass and food processing wastes. Crit Rev Biotechnol 2020;41:216-228. [PMID: 33153315 DOI: 10.1080/07388551.2020.1844632] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
7
Song X, Wang Y, Wang P, Pu G, Zou X. GATA‐type transcriptional factor Gat1 regulates nitrogen uptake and polymalic acid biosynthesis in polyextremotolerant fungus Aureobasidium pullulans. Environ Microbiol 2019;22:229-242. [DOI: 10.1111/1462-2920.14841] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2019] [Revised: 10/17/2019] [Accepted: 10/22/2019] [Indexed: 02/03/2023]
8
Tate JJ, Tolley EA, Cooper TG. Sit4 and PP2A Dephosphorylate Nitrogen Catabolite Repression-Sensitive Gln3 When TorC1 Is Up- as Well as Downregulated. Genetics 2019;212:1205-1225. [PMID: 31213504 PMCID: PMC6707456 DOI: 10.1534/genetics.119.302371] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 06/17/2019] [Indexed: 11/18/2022]  Open
9
Mara P, Fragiadakis GS, Gkountromichos F, Alexandraki D. The pleiotropic effects of the glutamate dehydrogenase (GDH) pathway in Saccharomyces cerevisiae. Microb Cell Fact 2018;17:170. [PMID: 30384856 PMCID: PMC6211499 DOI: 10.1186/s12934-018-1018-4] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Accepted: 10/29/2018] [Indexed: 12/19/2022]  Open
10
Regulatory Networks Governing Methionine Catabolism into Volatile Organic Sulfur-Containing Compounds in Clonostachys rosea. Appl Environ Microbiol 2018;84:AEM.01840-18. [PMID: 30217835 DOI: 10.1128/aem.01840-18] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Accepted: 09/04/2018] [Indexed: 11/20/2022]  Open
11
Gossing M, Smialowska A, Nielsen J. Impact of forced fatty acid synthesis on metabolism and physiology of Saccharomyces cerevisiae. FEMS Yeast Res 2018;18:5086656. [DOI: 10.1093/femsyr/foy096] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Accepted: 08/27/2018] [Indexed: 01/07/2023]  Open
12
Regulation of Sensing, Transportation, and Catabolism of Nitrogen Sources in Saccharomyces cerevisiae. Microbiol Mol Biol Rev 2018;82:82/1/e00040-17. [PMID: 29436478 DOI: 10.1128/mmbr.00040-17] [Citation(s) in RCA: 78] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]  Open
13
More than One Way in: Three Gln3 Sequences Required To Relieve Negative Ure2 Regulation and Support Nuclear Gln3 Import in Saccharomyces cerevisiae. Genetics 2017;208:207-227. [PMID: 29113979 DOI: 10.1534/genetics.117.300457] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2017] [Accepted: 11/02/2017] [Indexed: 01/20/2023]  Open
14
Yeast RNA-Binding Protein Nab3 Regulates Genes Involved in Nitrogen Metabolism. Mol Cell Biol 2017;37:MCB.00154-17. [PMID: 28674185 DOI: 10.1128/mcb.00154-17] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 06/23/2017] [Indexed: 01/28/2023]  Open
15
TORC1-Dependent Phosphorylation Targets in Fission Yeast. Biomolecules 2017;7:biom7030050. [PMID: 28671615 PMCID: PMC5618231 DOI: 10.3390/biom7030050] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2017] [Revised: 06/27/2017] [Accepted: 06/28/2017] [Indexed: 12/11/2022]  Open
16
Glutamine: a major player in nitrogen catabolite repression in the yeast Dekkera bruxellensis. Antonie van Leeuwenhoek 2017. [PMID: 28631172 DOI: 10.1007/s10482-017-0888-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
17
General Amino Acid Control and 14-3-3 Proteins Bmh1/2 Are Required for Nitrogen Catabolite Repression-Sensitive Regulation of Gln3 and Gat1 Localization. Genetics 2016;205:633-655. [PMID: 28007891 DOI: 10.1534/genetics.116.195800] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2016] [Accepted: 12/21/2016] [Indexed: 01/08/2023]  Open
18
Georis I, Isabelle G, Tate JJ, Vierendeels F, Cooper TG, Dubois E. Premature termination of GAT1 transcription explains paradoxical negative correlation between nitrogen-responsive mRNA, but constitutive low-level protein production. RNA Biol 2016;12:824-37. [PMID: 26259534 PMCID: PMC4615157 DOI: 10.1080/15476286.2015.1058476] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
19
Milias-Argeitis A, Oliveira AP, Gerosa L, Falter L, Sauer U, Lygeros J. Elucidation of Genetic Interactions in the Yeast GATA-Factor Network Using Bayesian Model Selection. PLoS Comput Biol 2016;12:e1004784. [PMID: 26967983 PMCID: PMC4788432 DOI: 10.1371/journal.pcbi.1004784] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2015] [Accepted: 02/02/2016] [Indexed: 12/03/2022]  Open
20
The modification of Gat1p in nitrogen catabolite repression to enhance non-preferred nitrogen utilization in Saccharomyces cerevisiae. Sci Rep 2016;6:21603. [PMID: 26899143 PMCID: PMC4761935 DOI: 10.1038/srep21603] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2015] [Accepted: 01/27/2016] [Indexed: 11/08/2022]  Open
21
Fayyad-Kazan M, Feller A, Bodo E, Boeckstaens M, Marini AM, Dubois E, Georis I. Yeast nitrogen catabolite repression is sustained by signals distinct from glutamine and glutamate reservoirs. Mol Microbiol 2015;99:360-79. [DOI: 10.1111/mmi.13236] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/28/2015] [Indexed: 01/29/2023]
22
Rai R, Tate JJ, Shanmuganatham K, Howe MM, Nelson D, Cooper TG. Nuclear Gln3 Import Is Regulated by Nitrogen Catabolite Repression Whereas Export Is Specifically Regulated by Glutamine. Genetics 2015;201:989-1016. [PMID: 26333687 PMCID: PMC4649666 DOI: 10.1534/genetics.115.177725] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2015] [Accepted: 08/31/2015] [Indexed: 11/18/2022]  Open
23
TORC1 Regulates Developmental Responses to Nitrogen Stress via Regulation of the GATA Transcription Factor Gaf1. mBio 2015;6:e00959. [PMID: 26152587 PMCID: PMC4488950 DOI: 10.1128/mbio.00959-15] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
24
Tate JJ, Georis I, Rai R, Vierendeels F, Dubois E, Cooper TG. GATA Factor Regulation in Excess Nitrogen Occurs Independently of Gtr-Ego Complex-Dependent TorC1 Activation. G3 (BETHESDA, MD.) 2015;5:1625-38. [PMID: 26024867 PMCID: PMC4528319 DOI: 10.1534/g3.115.019307] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2015] [Accepted: 05/28/2015] [Indexed: 11/28/2022]
25
Nitrogen starvation and TorC1 inhibition differentially affect nuclear localization of the Gln3 and Gat1 transcription factors through the rare glutamine tRNACUG in Saccharomyces cerevisiae. Genetics 2014;199:455-74. [PMID: 25527290 DOI: 10.1534/genetics.114.173831] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
26
Scheidt V, Jüdes A, Bär C, Klassen R, Schaffrath R. Loss of wobble uridine modification in tRNA anticodons interferes with TOR pathway signaling. MICROBIAL CELL 2014;1:416-424. [PMID: 28357221 PMCID: PMC5349137 DOI: 10.15698/mic2014.12.179] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
27
Kupiec M, Weisman R. TOR links starvation responses to telomere length maintenance. Cell Cycle 2014;11:2268-71. [DOI: 10.4161/cc.20401] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]  Open
28
State transitions in the TORC1 signaling pathway and information processing in Saccharomyces cerevisiae. Genetics 2014;198:773-86. [PMID: 25085507 DOI: 10.1534/genetics.114.168369] [Citation(s) in RCA: 98] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
29
Rai R, Tate JJ, Shanmuganatham K, Howe MM, Cooper TG. A domain in the transcription activator Gln3 specifically required for rapamycin responsiveness. J Biol Chem 2014;289:18999-9018. [PMID: 24847055 DOI: 10.1074/jbc.m114.563668] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
30
Fayyadkazan M, Tate JJ, Vierendeels F, Cooper TG, Dubois E, Georis I. Components of Golgi-to-vacuole trafficking are required for nitrogen- and TORC1-responsive regulation of the yeast GATA factors. Microbiologyopen 2014;3:271-87. [PMID: 24644271 PMCID: PMC4082702 DOI: 10.1002/mbo3.168] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2013] [Revised: 01/20/2014] [Accepted: 01/27/2014] [Indexed: 01/18/2023]  Open
31
Conrad M, Schothorst J, Kankipati HN, Van Zeebroeck G, Rubio-Texeira M, Thevelein JM. Nutrient sensing and signaling in the yeast Saccharomyces cerevisiae. FEMS Microbiol Rev 2014;38:254-99. [PMID: 24483210 PMCID: PMC4238866 DOI: 10.1111/1574-6976.12065] [Citation(s) in RCA: 419] [Impact Index Per Article: 41.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2013] [Revised: 12/23/2013] [Accepted: 01/22/2014] [Indexed: 02/04/2023]  Open
32
Rai R, Tate JJ, Georis I, Dubois E, Cooper TG. Constitutive and nitrogen catabolite repression-sensitive production of Gat1 isoforms. J Biol Chem 2013;289:2918-33. [PMID: 24324255 DOI: 10.1074/jbc.m113.516740] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
33
A sensing role of the glutamine synthetase in the nitrogen regulation network in Fusarium fujikuroi. PLoS One 2013;8:e80740. [PMID: 24260467 PMCID: PMC3829961 DOI: 10.1371/journal.pone.0080740] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2013] [Accepted: 10/05/2013] [Indexed: 11/29/2022]  Open
34
Tate JJ, Cooper TG. Five conditions commonly used to down-regulate tor complex 1 generate different physiological situations exhibiting distinct requirements and outcomes. J Biol Chem 2013;288:27243-27262. [PMID: 23935103 PMCID: PMC3779721 DOI: 10.1074/jbc.m113.484386] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2013] [Revised: 08/08/2013] [Indexed: 11/06/2022]  Open
35
Zhao X, Zou H, Fu J, Chen J, Zhou J, Du G. Nitrogen regulation involved in the accumulation of urea in Saccharomyces cerevisiae. Yeast 2013;30:437-47. [PMID: 23996237 DOI: 10.1002/yea.2980] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2013] [Revised: 08/19/2013] [Accepted: 08/23/2013] [Indexed: 11/07/2022]  Open
36
Lee K, Hahn JS. Interplay of Aro80 and GATA activators in regulation of genes for catabolism of aromatic amino acids inSaccharomyces cerevisiae. Mol Microbiol 2013;88:1120-34. [DOI: 10.1111/mmi.12246] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/26/2013] [Indexed: 11/29/2022]
37
Rai R, Tate JJ, Nelson DR, Cooper TG. gln3 mutations dissociate responses to nitrogen limitation (nitrogen catabolite repression) and rapamycin inhibition of TorC1. J Biol Chem 2012;288:2789-804. [PMID: 23223232 DOI: 10.1074/jbc.m112.421826] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
38
Feller A, Georis I, Tate JJ, Cooper TG, Dubois E. Alterations in the Ure2 αCap domain elicit different GATA factor responses to rapamycin treatment and nitrogen limitation. J Biol Chem 2012. [PMID: 23184930 DOI: 10.1074/jbc.m112.385054] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
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