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Li J, Huang Y, Yu X, Wu Q, Man X, Diao Z, You H, Shen J, Cai Y. Identification and Application of CLE Peptides for Drought Resistance in Solanaceae Crops. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024. [PMID: 38836320 DOI: 10.1021/acs.jafc.4c03684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2024]
Abstract
The CLE (CLAVATA3/Embryo Surrounding Region-related) family, a group of peptides with hormone-like features, plays a pivotal role in plant growth, development, and adaptation to stress. Through homology-based blast analysis of 32 Arabidopsis thaliana CLE peptide sequences, we have identified 5, 14, and 10 CLE family members in Nicotiana tabacum, Capsicum annuum, and Solanum melongena, respectively. Chemical synthesis and functional assays of the peptides led to the discovery that NtCLE3 substantially enhances the drought resistance of these three Solanaceae crops. Our transcriptome, RT-qPCR, and antioxidant enzyme activity data showed that NtCLE3 increased antioxidant capacity and ABA synthesis in tobacco. Moreover, the recombinant protein RPNtCLE3, composed of 6*NtCLE3, preserved the capacity to foster drought resilience and proved to be a promising drought resistance regulator, which presents a more favorable alternative for field applications compared to ABA which degrades rapidly under sunlight exposure. This research unveils the prospective utility of NtCLE3 in enhancing drought tolerance in Solanaceae crops and provides new ideas for the development of novel bioregulators aimed at mitigating drought stress.
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Affiliation(s)
- Junhao Li
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
| | - Yan Huang
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
| | - Xiaosong Yu
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
| | - Qiqi Wu
- Chengdu Lusyno Biotechnology Co., Ltd., Chengdu 610213, PR China
| | - Xiaxia Man
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
| | - Zhihong Diao
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
| | - Huang You
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
| | - Jinbo Shen
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, Zhejiang 311300, PR China
| | - Yi Cai
- College of Life Sciences, Sichuan Agricultural University, Ya'an, Sichuan 625014, PR China
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2
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Kalın R. One‐Step Isolation and Biochemical Characterization of A Novel Peroxidase Enzyme from Jerusalem Artichoke (
Helianthus Tuberosus
L.). ChemistrySelect 2023. [DOI: 10.1002/slct.202204732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Affiliation(s)
- Ramazan Kalın
- Department of Basic Sciences Faculty of Science Erzurum Technical University Erzurum 25100 Türkiye
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3
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Catalytic performance improvement with metal ion changes for efficient, stable, and reusable superoxide dismutase–metalphosphates hybrid nanoflowers. CHEMICAL PAPERS 2022. [DOI: 10.1007/s11696-022-02179-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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4
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Yacon (Smallanthus sonchifolius) peel as a promising peroxidase source for the treatment of phenolic wastewater. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2021.102254] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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5
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Amino acid-metal phosphate hybrid nanoflowers (AaHNFs): their preparation, characterization and anti-oxidant capacities. Polym Bull (Berl) 2021. [DOI: 10.1007/s00289-021-03973-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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6
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Oztekin A, Almaz Z, Onlu S. Production and purification of peroxidases from callus cultures of white and red cabbage for enzymatic decolourization of reactive blue 19 and acid blue 25 dyes. BIOCATAL BIOTRANSFOR 2021. [DOI: 10.1080/10242422.2021.1906659] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Aykut Oztekin
- Department of Medical Services and Techniques, Vocational School of Health Services, Agri Ibrahim Cecen University, Agri, Turkey
| | - Zuleyha Almaz
- Molecular Biology and Genetics Department, Faculty of Science and Literature, Mus Alparslan University, Mus, Turkey
| | - Seyma Onlu
- Molecular Biology and Genetics Department, Faculty of Science and Literature, Mus Alparslan University, Mus, Turkey
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7
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Almaz Z, Oztekin A, Abul N, Gerni S, Erel D, Kocak SM, Sengül ME, Ozdemir H. A new approach for affinity-based purification of horseradish peroxidase. Biotechnol Appl Biochem 2020; 68:102-113. [PMID: 32060967 DOI: 10.1002/bab.1899] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 02/13/2020] [Indexed: 01/10/2023]
Abstract
We have developed efficient procedure for isolation of horseradish peroxidase (HRP) using aminobenzohydrazide-based affinity chromatography. Sepharose 4B-bounded aminobenzohydrazides are suitable for long-term use and large-scale purification. In this study, 26 aminobenzohydrazide derivatives were synthesized, characterized and defined as new HRP inhibitors. In addition, detailed inhibition effects of these molecules on HRP enzyme were investigated. Affinity matrix was formed by bonding aminobenzohydrazides, which exhibited inhibitory activity to sepharose-4B-l-tyrosine. HRP was isolated from crude homogenate in single step and purification factors were recorded as 1,151-fold (recovery of 8.5%) with 4-amino 3-bromo benzohydrazide and as 166.16-fold (recovery of 16.67 %) with 3-amino 4-chloro benzohydrazide.
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Affiliation(s)
- Zuleyha Almaz
- Molecular Biology and Genetics Department, Faculty of Science and Literature, Mus Alparslan University, Mus, Turkey
| | - Aykut Oztekin
- Department of Medical Services and Techniques, Vocational School of Health Services, Agri Ibrahim Cecen University, Agri, Turkey
| | - Nurgul Abul
- Department of Chemistry, Science Faculty, Atatürk University, Erzurum, Turkey
| | - Serpil Gerni
- Department of Chemistry, Science Faculty, Atatürk University, Erzurum, Turkey
| | - Deniz Erel
- Department of Chemistry, Science Faculty, Atatürk University, Erzurum, Turkey
| | - Seyma Mehtap Kocak
- Department of Chemistry, Science Faculty, Atatürk University, Erzurum, Turkey
| | - Mehmet Emin Sengül
- Department of Chemistry, Science Faculty, Atatürk University, Erzurum, Turkey
| | - Hasan Ozdemir
- Department of Chemistry, Science Faculty, Atatürk University, Erzurum, Turkey
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Khan R, Zhou P, Ma X, Zhou L, Wu Y, Ullah Z, Wang S. Transcriptome Profiling, Biochemical and Physiological Analyses Provide New Insights towards Drought Tolerance in Nicotiana tabacum L. Genes (Basel) 2019; 10:E1041. [PMID: 31847498 PMCID: PMC6947287 DOI: 10.3390/genes10121041] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2019] [Revised: 12/10/2019] [Accepted: 12/12/2019] [Indexed: 02/06/2023] Open
Abstract
Drought stress is one of the main factors limiting crop production, which provokes a number of changes in plants at physiological, anatomical, biochemical and molecular level. To unravel the various mechanisms underpinning tobacco (Nicotiana tabacum L.) drought stress tolerance, we conducted a comprehensive physiological, anatomical, biochemical and transcriptome analyses of three tobacco cultivars (i.e., HongHuaDaJinYuan (H), NC55 (N) and Yun Yan-100 (Y)) seedlings that had been exposed to drought stress. As a result, H maintained higher growth in term of less reduction in plant fresh weight, dry weight and chlorophyll content as compared with N and Y. Anatomical studies unveiled that drought stress had little effect on H by maintaining proper leaf anatomy while there were significant changes in the leaf anatomy of N and Y. Similarly, H among the three varieties was the least affected variety under drought stress, with more proline content accumulation and a powerful antioxidant defense system, which mitigates the negative impacts of reactive oxygen species. The transcriptomic analysis showed that the differential genes expression between HongHuaDaJinYuan, NC55 and Yun Yan-100 were enriched in the functions of plant hormone signal transduction, starch and sucrose metabolism, and arginine and proline metabolism. Compared to N and Y, the differentially expressed genes of H displayed enhanced expression in the corresponding pathways under drought stress. Together, our findings offer insights that H was more tolerant than the other two varieties, as evidenced at physiological, biochemical, anatomical and molecular level. These findings can help us to enhance our understanding of the molecular mechanisms through the networks of various metabolic pathways mediating drought stress adaptation in tobacco.
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Affiliation(s)
- Rayyan Khan
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Qingdao 266101, China; (R.K.); (L.Z.); (Y.W.); (Z.U.); (S.W.)
| | - Peilu Zhou
- College of Agronomy, Resource and Environment, Tianjin Agricultural University, Tianjin 300384, China;
| | - Xinghua Ma
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Qingdao 266101, China; (R.K.); (L.Z.); (Y.W.); (Z.U.); (S.W.)
| | - Lei Zhou
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Qingdao 266101, China; (R.K.); (L.Z.); (Y.W.); (Z.U.); (S.W.)
| | - Yuanhua Wu
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Qingdao 266101, China; (R.K.); (L.Z.); (Y.W.); (Z.U.); (S.W.)
| | - Zia Ullah
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Qingdao 266101, China; (R.K.); (L.Z.); (Y.W.); (Z.U.); (S.W.)
| | - Shusheng Wang
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture, Qingdao 266101, China; (R.K.); (L.Z.); (Y.W.); (Z.U.); (S.W.)
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9
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Mejri F, Karmali A, Jaoued N, Casabianca H, Hosni K. Purification and Partial Characterization of Peroxidases from Three Food Waste By-Products: Broad Bean Pods, Pea Pods, and Artichoke Stems. Appl Biochem Biotechnol 2019; 189:576-588. [PMID: 31069629 DOI: 10.1007/s12010-019-03028-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Accepted: 04/22/2019] [Indexed: 10/26/2022]
Abstract
In this study, peroxidases (PODs) from three waste by-products: broad bean pods (BBP), pea pods (PP), and artichoke stems (ARS) were purified and their optimal conditions were determined for the first time. The purification process resulted in 4.32, 7.21, and 8.9% of POD recoveries for PP, ARS, and BBP, respectively. They were purified 2.12-, 32.97-, and 10-fold with specific activities of 27.26, 266.43, and 27 U/mg of protein, respectively. Analysis of their optimal conditions showed that POD purified from BBP and PP exhibited the highest activity at 60 °C temperature and pH 6 and 8 with strong affinity with catechol substrate (Km of 0.356 and 0.189 mM; Vmax of 0.08 and 0.041 μM/min for BBP and PP, respectively). The highest activity of ARS POD was obtained under the following conditions: temperature at 50 °C, pH from 6 to 8, and guaiacol as substrate (Km 0.375 mM; Vmax 0.012 μM/min). Apart from giving the opportunity for recycling the food industry wastes, the studied waste by-products could represent an alternative source of PODs that could find several applications in the biotechnological, chemical, and food industries.
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Affiliation(s)
- Faiza Mejri
- Laboratoire des Substances Naturelles, Institut National de recherché et d'Analyse Physico-chimique (INRAP), Biotechpôle de Sidi Thabet, 2020, Ariana, Tunisia
- Faculté des Sciences de Bizerte, Université de Carthage, Jarzouna, 7021, Bizerte, Tunisia
| | - Amin Karmali
- Instituto Superior de Engenharia de Lisboa, Rua Conselheiro Emídio Navarro, 1, 1959-007, Lisbon, Portugal
| | - Najeh Jaoued
- Laboratoire Méthodes Traitement et Analyse, Institut National de recherché et d'Analyse Physico-chimique (INRAP), Biotechpôle de Sidi Thabet, 2020, Ariana, Tunisia
| | - Hervé Casabianca
- Univ Lyon, CNRS, Université Claude Bernard Lyon 1, Ens de Lyon, Institut des Sciences Analytiques, UMR 5280, 5 rue de la Doua, F-69100, Villeurbanne, France
| | - Karim Hosni
- Laboratoire des Substances Naturelles, Institut National de recherché et d'Analyse Physico-chimique (INRAP), Biotechpôle de Sidi Thabet, 2020, Ariana, Tunisia.
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10
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Koksal Z, Kalin R, Gulcin I, Ozdemir H. Inhibitory effects of selected pesticides on peroxidases purified by affinity chromatography. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2018. [DOI: 10.1080/10942912.2018.1424197] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Zeynep Koksal
- Faculty of Engineering and Natural Sciences, Department of Chemistry, Istanbul Medeniyet University, Istanbul, Turkey
| | - Ramazan Kalin
- Faculty of Science, Department of Basic Science, Erzurum Technical University, Erzurum, Turkey
- Faculty of Science, Department of Chemistry, Ataturk University, Erzurum, Turkey
| | - Ilhami Gulcin
- Faculty of Science, Department of Chemistry, Ataturk University, Erzurum, Turkey
| | - Hasan Ozdemir
- Faculty of Science, Department of Chemistry, Ataturk University, Erzurum, Turkey
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11
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Altinkaynak C, Tavlasoglu S, Kalin R, Sadeghian N, Ozdemir H, Ocsoy I, Özdemir N. A hierarchical assembly of flower-like hybrid Turkish black radish peroxidase-Cu 2+ nanobiocatalyst and its effective use in dye decolorization. CHEMOSPHERE 2017; 182:122-128. [PMID: 28494355 DOI: 10.1016/j.chemosphere.2017.05.012] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2016] [Revised: 04/30/2017] [Accepted: 05/02/2017] [Indexed: 06/07/2023]
Abstract
Effective dye decolorization in wastewater still shows a big challenge. Although the biological methods, especially using enzymes, offer alternative and effective process for dye degradation and overcome the limitations of chemical and physical methods such as the instability, lack of reusability and high cost of free enzymes strictly, which limit their use in many scientific and technical applications. Enzymes rapidly lose their activities in aqueous solutions and against environmental changes due to their very susceptibility and unfavorable conformations. Herein, we report preparation of the enzyme-inorganic hybrid nanostructures with flower-like shape consisting of Turkish black radish peroxidase and Cu2+ metal ions using an encouraging enzyme immobilization approach. The peroxidase-Cu2+ hybrid nanoflowers (NFs) exhibited enhanced stability and activity towards various pH values and provided excellent dye decolorization efficiency for Victoria blue (VB) dye with more than 90% within 1 h. The NFs were also repeatedly used in efficient and caused 77% VB decolorization efficiency even at tenth cycles. However, to the best of our knowledge, for the first time, we prepared peroxidase enzyme isolated from Turkish black radish incorporated NFs and used them for dye decolorization. We believe that the NFs can be promising materials for dye decolorization in real wastewater treatment.
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Affiliation(s)
- Cevahir Altinkaynak
- Department of Analytical Chemistry, Faculty of Pharmacy, Erciyes University, 38039, Kayseri, Turkey; Nanotechnology Research Center, Erciyes University, Kayseri, 38039, Turkey
| | - Sureyya Tavlasoglu
- Department of Chemistry, Faculty of Science, Erciyes University, Kayseri, 38039, Turkey
| | - Ramazan Kalin
- Department of Basic Sciences, Faculty of Science, Erzurum Technical University, Erzurum, Turkey; Department of Chemistry, Faculty of Science, Ataturk University, Erzurum, 25030, Turkey
| | - Nastaran Sadeghian
- Department of Chemistry, Faculty of Science, Ataturk University, Erzurum, 25030, Turkey
| | - Hasan Ozdemir
- Department of Chemistry, Faculty of Science, Ataturk University, Erzurum, 25030, Turkey
| | - Ismail Ocsoy
- Department of Analytical Chemistry, Faculty of Pharmacy, Erciyes University, 38039, Kayseri, Turkey; Nanotechnology Research Center, Erciyes University, Kayseri, 38039, Turkey.
| | - Nalan Özdemir
- Department of Chemistry, Faculty of Science, Erciyes University, Kayseri, 38039, Turkey.
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Bracco LF, Levin GJ, Navarro del Cañizo AA, Wolman FJ, Miranda MV, Cascone O. Simultaneous purification and immobilization of soybean hull peroxidase with a dye attached to chitosan mini-spheres. BIOCATAL BIOTRANSFOR 2017. [DOI: 10.1080/10242422.2017.1334767] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Lautaro Fidel Bracco
- Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Buenos Aires, Argentina
- NANOBIOTEC, Consejo Nacional de Investigaciones Científicas y Técnicas (UBA-CONICET), Buenos Aires, Argentina
| | - Gustavo Javier Levin
- Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Buenos Aires, Argentina
- NANOBIOTEC, Consejo Nacional de Investigaciones Científicas y Técnicas (UBA-CONICET), Buenos Aires, Argentina
- Centro de Investigación y Transferencia de Entre Ríos (CITER) CONICET- UNER, Gualeguaychú, Entre Ríos, Argentina
| | - Agustín Andrés Navarro del Cañizo
- Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Buenos Aires, Argentina
- NANOBIOTEC, Consejo Nacional de Investigaciones Científicas y Técnicas (UBA-CONICET), Buenos Aires, Argentina
| | - Federico Javier Wolman
- Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Buenos Aires, Argentina
- NANOBIOTEC, Consejo Nacional de Investigaciones Científicas y Técnicas (UBA-CONICET), Buenos Aires, Argentina
| | - María Victoria Miranda
- Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Buenos Aires, Argentina
- NANOBIOTEC, Consejo Nacional de Investigaciones Científicas y Técnicas (UBA-CONICET), Buenos Aires, Argentina
| | - Osvaldo Cascone
- Facultad de Farmacia y Bioquímica, Universidad de Buenos Aires, Buenos Aires, Argentina
- NANOBIOTEC, Consejo Nacional de Investigaciones Científicas y Técnicas (UBA-CONICET), Buenos Aires, Argentina
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Singh S, Singh R, Bhushan Jha A, Misra AN, Sharma P. Amorphophallus paeoniifolius corm: A potential source of peroxidase for wide applications. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2017. [DOI: 10.1080/10942912.2016.1247363] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Shikha Singh
- Centre for Life Sciences, Central University of Jharkhand, Brambe, Ranchi, India
| | - Rajani Singh
- Centre for Life Sciences, Central University of Jharkhand, Brambe, Ranchi, India
| | - Ambuj Bhushan Jha
- Crop Development Centre, Department of Plant Sciences, University of Saskatchewan, Saskatoon, SK, Canada
| | | | - Pallavi Sharma
- Centre for Life Sciences, Central University of Jharkhand, Brambe, Ranchi, India
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Akdaş ZZ, Bakkalbaşı E. Influence of different cooking methods on color, bioactive compounds, and antioxidant activity of kale. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2016. [DOI: 10.1080/10942912.2016.1188308] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Altinkaynak C, Yilmaz I, Koksal Z, Özdemir H, Ocsoy I, Özdemir N. Preparation of lactoperoxidase incorporated hybrid nanoflower and its excellent activity and stability. Int J Biol Macromol 2016; 84:402-9. [DOI: 10.1016/j.ijbiomac.2015.12.018] [Citation(s) in RCA: 90] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2015] [Revised: 12/08/2015] [Accepted: 12/10/2015] [Indexed: 12/01/2022]
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