1
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Wang J, Zhang C, Wen Y, Zhang Y, Zhu S, Liu X. Investigating the antibacterial mode of Limosilactobacillus reuteri LR08 regulated by soybean proteins and peptides. Food Chem 2024; 446:138780. [PMID: 38402764 DOI: 10.1016/j.foodchem.2024.138780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 01/18/2024] [Accepted: 02/15/2024] [Indexed: 02/27/2024]
Abstract
Soybean proteins (pro) and soybean peptides (pep) are beneficial to the growth and metabolism of Limosilactobacillus reuteri (L. reuteri). However, whether they could assist L. reuteri in inhibiting intestinal pathogens and the inhibition mode of them is still unclear. In this study, a co-culture experiment of L. reuteri LR08 with Escherichia coli JCM 1649 (E. coli) was performed. It showed that pro and pep could still favour the growth of L. reuteri over E. coli under their competition. The inhibition zone experiment showed the digested soybean proteins (dpro) could improve its antibacterial activity by increasing the secretion of organic acids from L. reuteri. Furthermore, digested soybean peptides (dpep) could enhance nitrogen utilization capacity of L. reuteri over E. coli. These results explained the patterns of dpro and dpep assisting L. reuteri in inhibiting the growth of E. coli by regulating its organic acid secretion and the ability of nitrogen utilization.
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Affiliation(s)
- Jingyi Wang
- Key Laboratory of Geriatric Nutrition and Health (Beijing Technology and Business University), Ministry of Education, National Soybean Processing Industry Technology Innovation Center, Beijing Technology and Business University, China
| | - Chi Zhang
- Key Laboratory of Geriatric Nutrition and Health (Beijing Technology and Business University), Ministry of Education, National Soybean Processing Industry Technology Innovation Center, Beijing Technology and Business University, China.
| | - Yanchao Wen
- Key Laboratory of Geriatric Nutrition and Health (Beijing Technology and Business University), Ministry of Education, National Soybean Processing Industry Technology Innovation Center, Beijing Technology and Business University, China
| | - Yinxiao Zhang
- Key Laboratory of Geriatric Nutrition and Health (Beijing Technology and Business University), Ministry of Education, National Soybean Processing Industry Technology Innovation Center, Beijing Technology and Business University, China
| | - Shuya Zhu
- Key Laboratory of Geriatric Nutrition and Health (Beijing Technology and Business University), Ministry of Education, National Soybean Processing Industry Technology Innovation Center, Beijing Technology and Business University, China
| | - Xinqi Liu
- Key Laboratory of Geriatric Nutrition and Health (Beijing Technology and Business University), Ministry of Education, National Soybean Processing Industry Technology Innovation Center, Beijing Technology and Business University, China.
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2
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de Godoy HA, Faria AM, Roza NAV, Bach-Toledo L, Simabuco FM, Scharlack NK, de Oliveira RB, Antunes AEC, Arthur R, Mazon T. Point-of-Care Electrochemical Immunosensor Applied against Nosocomial Infection: Staphylococcus aureus Detection in Human Hand Skin. ACS Infect Dis 2024; 10:1949-1957. [PMID: 38741263 DOI: 10.1021/acsinfecdis.3c00603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2024]
Abstract
Staphylococcus aureus is an important pathogen that causes nosocomial infections, resulting in unacceptable morbidity and mortality rates. In this work, we proposed the construction of a nanostructured ZnO-based electrochemical immunosensor for qualitative and semiquantitative detection of S. aureus using simple methods for growing zinc oxide nanorods (ZnO NRs) on a sensor board and immobilizing the anti-S. aureus antibody on ZnO NRs through cystamine and glutaraldehyde. The immunosensor detected S. aureus in the 103-107 colony-forming unit (CFU) mL-1 range and showed a limit of detection (LoD) around 0.792 × 103 CFU mL-1. Beyond a satisfactory LoD, the developed immunosensor presented other advantages, such as high versatility for point-of-care assays and a suitable selective factor that admits the detection of the S. aureus concentration range in human hand skin after washing. Moreover, the immunosensor showed the potential to be an excellent device to control nosocomial infection by detecting the presence of S. aureus in human hand skin.
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Affiliation(s)
- Henri Alves de Godoy
- School of Technology, State University of Campinas (UNICAMP), 13484-332 Limeira, SP, Brazil
| | - Aline Macedo Faria
- Centro de Tecnologia da Informação Renato Archer, CTI, 13069-901 Campinas, SP, Brazil
| | | | - Larissa Bach-Toledo
- Centro de Tecnologia da Informação Renato Archer, CTI, 13069-901 Campinas, SP, Brazil
| | | | - Nayara Kastem Scharlack
- School of Applied Sciences, State University of Campinas (UNICAMP), 13484-350 Limeira, SP, Brazil
| | | | | | - Rangel Arthur
- School of Technology, State University of Campinas (UNICAMP), 13484-332 Limeira, SP, Brazil
| | - Talita Mazon
- Centro de Tecnologia da Informação Renato Archer, CTI, 13069-901 Campinas, SP, Brazil
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3
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Tao Y, Liu Q, Cheng N. Sea hedgehog-inspired surface-enhanced Raman scattering biosensor probe for ultrasensitive determination of Staphylococcus aureus in food supplements. Biosens Bioelectron 2024; 252:116146. [PMID: 38417286 DOI: 10.1016/j.bios.2024.116146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 02/16/2024] [Accepted: 02/19/2024] [Indexed: 03/01/2024]
Abstract
Staphylococcus aureus contamination in food supplements poses substantial challenges to public health and large-scale production but the sensitive detection in a timely manner remains a bottleneck. Drawing inspiration from the sea hedgehog, gold nanostars (AuNSs) were leveraged to design an ultrasensitive surface-enhanced Raman scattering (SERS) biosensor for the determination of Staphylococcus aureus in food supplements. Besides the surface enhancement furnished by the AuNSs, Raman reporter molecules and specific aptamers sequentially self-assembled onto these AuNSs to construct the "three-in-one" SERS biosensor probe for label-based quantitation of Staphylococcus aureus. Following incubation with contaminated health product samples, the gold nanostars@Raman reporter-aptamer specifically recognize and assemble around Staphylococcus aureus cells, forming a distinctive sea hedgehog structure. This unique configuration results in an amplified Raman signal at 1338 cm-1 and an enhancement factor of up to 6.71 × 107. The entire quantitative detection process can be completed within 30 min, boasting an exceptional limit of detection as low as 1.0 CFU mL-1. The method exhibits a broad working range for the determination of Staphylococcus aureus, with concentrations spanning 2.15 CFU mL-1 to 2.15 × 105 CFU mL-1. Furthermore, it demonstrates outstanding precision, with relative standard deviation values consistently below 5.0%. As a showcase to validate the practicality of the SERS method, we conducted tests on determining Staphylococcus aureus in a herbal food supplement, i.e., Ginkgo Biloba extract (GBE); the results align closely with those obtained through the conventional lysogeny broth agar plate method, pointing to the potential applicability in real-world scenarios.
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Affiliation(s)
- Yi Tao
- College of Pharmaceutical Science, Zhejiang University of Technology, Hangzhou, Zhejiang, 310032, China.
| | - Qing Liu
- College of Pharmaceutical Science, Zhejiang University of Technology, Hangzhou, Zhejiang, 310032, China
| | - Ningtao Cheng
- School of Public Health, Zhejiang University School of Medicine, Hangzhou, Zhejiang, 310058, China.
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4
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Li Q, Dou L, Zhang Y, Luo L, Yang H, Wen K, Yu X, Shen J, Wang Z. A comprehensive review on the detection of Staphylococcus aureus enterotoxins in food samples. Compr Rev Food Sci Food Saf 2024; 23:e13264. [PMID: 38284582 DOI: 10.1111/1541-4337.13264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 10/12/2023] [Accepted: 10/15/2023] [Indexed: 01/30/2024]
Abstract
Staphylococcal enterotoxins (SEs), the major virulence factors of Staphylococcus aureus, cause a wide range of food poisoning and seriously threaten human health by infiltrating the food supply chain at different phases of manufacture, processes, distribution, and market. The significant prevalence of Staphylococcus aureus calls for efficient, fast, and sensitive methods for the early detection of SEs. Here, we provide a comprehensive review of the hazards of SEs in contaminated food, the characteristic and worldwide regulations of SEs, and various detection methods for SEs with extensive comparison and discussion of benefits and drawbacks, mainly including biological detection, genetic detection, and mass spectrometry detection and biosensors. We highlight the biosensors for the screening purpose of SEs, which are classified according to different recognition elements such as antibodies, aptamers, molecularly imprinted polymers, T-cell receptors, and transducers such as optical, electrochemical, and piezoelectric biosensors. We analyzed challenges of biosensors for the monitoring of SEs and conclude the trends for the development of novel biosensors should pay attention to improve samples pretreatment efficiency, employ innovative nanomaterials, and develop portable instruments. This review provides new information and insightful commentary, important to the development and innovation of further detection methods for SEs in food samples.
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Affiliation(s)
- Qing Li
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Leina Dou
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Yingjie Zhang
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Liang Luo
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Huijuan Yang
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Kai Wen
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Xuezhi Yu
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Jianzhong Shen
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
| | - Zhanhui Wang
- National Key Laboratory of Veterinary Public Health safety, College of Veterinary Medicine China Agricultural University, Beijing Key Laboratory of Detection Technology for Animal-Derived Food Safety, and Beijing Laboratory for Food Quality and Safety, Beijing, China
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5
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Yu X, Ma Y, Liu S, Qi C, Zhang W, Xiang W, Li Z, Yang K, Duan S, Du X, Yu J, Xie Y, Wang Z, Jiang W, Zhang L, Lin X. Bacterial metabolism-triggered-chemiluminescence-based point-of-care testing platform for sensitive detection and photothermal inactivation of Staphylococcus aureus. Anal Chim Acta 2023; 1281:341899. [PMID: 38783739 DOI: 10.1016/j.aca.2023.341899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Revised: 10/05/2023] [Accepted: 10/10/2023] [Indexed: 05/25/2024]
Abstract
Post-operative pathogenic infections in liver transplantation seriously threaten human health. It is essential to develop novel methods for the highly sensitive and rapid detection of Staphylococcus aureus (S. aureus). Interestingly, the combination of the property of bacteria to secrete hydrogen peroxidase, bacterial metabolism-triggered-chemiluminescence (CL)-based bioassays can be as a candidate point-of-care testing (POCT) for the detection of S. aureus against the CL substrate Luminol and hydrogen peroxide without excitation light sources. Here, a CL-based strategy with stable and visualized CL intensity was fabricated according to a hybrid biomimetic enzyme of copper-Hemin metal-organic framework, which enhances the biological enzyme activity while improving the stability and sensitivity of the assay. By further integrating S. aureus-specific capture and one-step separation of the antibody-modified Fe3O4 NPs (Fe3O4 NPs@Ab), the portable device integrated smartphone enables CL-based POCT for specific detection of S. aureus in the range of 101-106 CFU/mL with a limit of detection as low as 1 CFU/mL. Specifically, S. aureus can be eliminated after detection with high antibacterial efficiency due to the excellent photothermal properties of Fe3O4 NPs@Ab. The developed multifunctional platform has the advantages of simplicity of operation and low cost, indicating great potential in clinical applications.
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Affiliation(s)
- Xinghui Yu
- School of Medicine, Nankai University, Tianjin, 300192, China; Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Yongqiang Ma
- School of Medicine, Nankai University, Tianjin, 300192, China; Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Siyuan Liu
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin Medical University First Center Clinical College, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Chunchun Qi
- School of Medicine, Nankai University, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Weiqi Zhang
- School of Medicine, Nankai University, Tianjin, 300192, China; Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Wen Xiang
- School of Medicine, Nankai University, Tianjin, 300192, China; Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Zhaoxian Li
- School of Medicine, Nankai University, Tianjin, 300192, China; Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Kai Yang
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin Medical University First Center Clinical College, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Shaoxian Duan
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin Medical University First Center Clinical College, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Xinrao Du
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin Medical University First Center Clinical College, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Jian Yu
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin Medical University First Center Clinical College, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Yan Xie
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin First Central Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China
| | - Zicheng Wang
- Tianjin Sprite Biological Technology, Tianjin, 300021, China
| | - Wentao Jiang
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin First Central Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China.
| | - Li Zhang
- Key laboratory of Transplantation, Chinese Academy of Medical Sciences, Tianjin, 300192, China; Tianjin Key Laboratory for Organ Transplantation, Tianjin First Center Hospital, Tianjin, 300192, China; Department of Liver Transplantation, Tianjin First Central Hospital, Tianjin, 300192, China; Tianjin Key Laboratory of Molecular and Treatment of Liver Cancer, Tianjin First Center Hospital, Tianjin, 300192, China.
| | - Xiaodong Lin
- University of Macau Zhuhai UM Science & Technology Research Institute, Zhuhai, 519000, China.
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Tabaraki R, Nazari F. Vancomycin-modified nitrogen and chloride doped carbon dots and their application as a Staphylococcus aureus probe. Anal Chim Acta 2023; 1268:341311. [PMID: 37268336 DOI: 10.1016/j.aca.2023.341311] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 04/30/2023] [Accepted: 05/01/2023] [Indexed: 06/04/2023]
Abstract
In this research, N, Cl-doped carbon dots (N, Cl-CDs) were prepared in choline chloride-glycerol deep eutectic solvent (DES) by microwave method. N, Cl-CDs surface was modified with vancomycin for detection of Staphylococcus aureus (S. aureus) bacteria in the range of 102-107 colony-forming unit per milliliter (CFU/mL). The detection limit was 101 CFU/mL. Morphology and structure of N, Cl-CDs were characterized by transmission electron microscopy (TEM), X-ray photon spectroscopy (XPS), photoluminescence spectroscopy, FT-IR spectroscopy, energy dispersive X-ray spectroscopy (EDXS) and zeta potential. The prepared N, Cl-CDs had excellent dispersion in water, particle size range of 2-3 nm, and quantum yield of 38.75%. Speed, wide linear range and more convenient were advantages of new probe with respect to other methods.
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Affiliation(s)
- Reza Tabaraki
- Department of Chemistry, Faculty of Science, Ilam University, Ilam, Iran.
| | - Fereshteh Nazari
- Department of Chemistry, Faculty of Science, Ilam University, Ilam, Iran
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7
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Kim JK, Yun H, Yeom CH, Kim EJ, Kim W, Lee CS, Kim BG, Jeong HJ. Flow cytometry-based rapid detection of Staphylococcus aureus and Pseudomonas aeruginosa using fluorescent antibodies. RSC Adv 2022; 12:34660-34669. [PMID: 36545616 PMCID: PMC9717348 DOI: 10.1039/d2ra05694a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 11/26/2022] [Indexed: 12/04/2022] Open
Abstract
Staphylococcus aureus (S. aureus) and Pseudomonas aeruginosa (P. aeruginosa) are major pathogens frequently detected in food and beverage poisoning, and persistent infections. Therefore, the development of a rapid method that can detect these pathogens before serious multiplication is required. In this study, we established a flow cytometry (FCM)-based detection method that allows rapid acquisition of cell populations in fluid samples by using a fluorescent antibody against S. aureus or P. aeruginosa. Using this method, we detected these pathogens with a 103 to 105 CFU order of limit of detection value within 1 hour. The FCM-based method for the detection of S. aureus and P. aeruginosa offers the possibility of high-throughput analysis of pathogens in food, environmental, and clinical sources.
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Affiliation(s)
- Joo-Kyung Kim
- Interdisciplinary Program for Biochemical Engineering and Biotechnology, Seoul National UniversitySeoul08826South Korea
| | - Hanool Yun
- Department of Biological and Chemical Engineering, Hongik UniversitySejong30016South Korea
| | - Chang-Hun Yeom
- Department of Biological and Chemical Engineering, Hongik UniversitySejong30016South Korea
| | - Eun-Jung Kim
- Bio-MAX/N-Bio, Seoul National UniversitySeoul08826South Korea
| | - Wooseong Kim
- College of Pharmacy and Graduate School of Pharmaceutical Sciences, Ewha Womans UniversitySeoul 03760South Korea
| | - Chang-Soo Lee
- Department of Chemical Engineering and Applied Chemistry, Chungnam National UniversityDaejeon 34134South Korea
| | - Byung-Gee Kim
- Interdisciplinary Program for Biochemical Engineering and Biotechnology, Seoul National UniversitySeoul08826South Korea,Bio-MAX/N-Bio, Seoul National UniversitySeoul08826South Korea
| | - Hee-Jin Jeong
- Department of Biological and Chemical Engineering, Hongik UniversitySejong30016South Korea
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8
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Heng P, Liu J, Song Z, Wu C, Yu X, He Y. Rapid detection of Staphylococcus aureus using a novel multienzyme isothermal rapid amplification technique. Front Microbiol 2022; 13:1027785. [PMID: 36312945 PMCID: PMC9606696 DOI: 10.3389/fmicb.2022.1027785] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 09/21/2022] [Indexed: 11/25/2022] Open
Abstract
Staphylococcus aureus is a common pathogen that causes various infections. Therefore, it is crucial to develop a fast and easy detection method for diagnosing and preventing S. aureus infections. In this study, MIRA assay was developed and validated (specificity; 100%) for the detection of S. aureus with nuc as the target gene. The reaction temperature and reaction time were then optimized, and the best reaction was at 40°C, 20 min. The assay could detect S. aureus in only 25 min. Additionally, the limit of detection of MIRA was 5 × 102 CFU/ml, 10-fold lower than that of the traditional PCR. Furthermore, this assay efficiently detected 219 S. aureus of 335 strains obtained from different bacterial samples (detection accuracy; 99.40%). In conclusion, this study provides a rapid and easy-to-operate method for the detection of S. aureus, and thus can be used for the timely diagnosis and prevention of S. aureus infection.
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Affiliation(s)
- Pengfei Heng
- State Key Laboratory of Southwestern Chinese Medicine Resources, College of Medical Technology, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China
| | - Jiakai Liu
- Department of Ultrasound Medicine, The Second Affiliated Hospital of Chengdu Medical College, China National Nuclear Corporation 416 Hospital, Chengdu, Sichuan, China
| | - Zhen Song
- State Key Laboratory of Southwestern Chinese Medicine Resources, College of Medical Technology, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China
| | - Chuan Wu
- State Key Laboratory of Southwestern Chinese Medicine Resources, College of Medical Technology, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China
| | - Xiuzhong Yu
- Department of Laboratory Medicine, People’s Hospital of Xinjin District, Chengdu, Sichuan, China
| | - Yang He
- State Key Laboratory of Southwestern Chinese Medicine Resources, College of Medical Technology, Chengdu University of Traditional Chinese Medicine, Chengdu, Sichuan, China
- *Correspondence: Yang He,
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9
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Luka GS, Najjaran H, Hoorfar M. On-chip-based electrochemical biosensor for the sensitive and label-free detection of Cryptosporidium. Sci Rep 2022; 12:6957. [PMID: 35484282 PMCID: PMC9051104 DOI: 10.1038/s41598-022-10765-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Accepted: 03/08/2022] [Indexed: 01/14/2023] Open
Abstract
Cryptosporidium, an intestinal protozoan pathogen, is one of the leading causes of death in children and diarrhea in healthy adults. Detection of Cryptosporidium has become a high priority to prevent potential outbreaks. In this paper, a simple, easy to fabricate, and cost-effective on-chip-based electrochemical biosensor has been developed for the sensitive and label-free detection of Cryptosporidium oocysts in water samples. The sensor was fabricated using standard lithography using a mask with a 3-electrode design and modified by self-assembling a hybrid of a thiolated protein/G and the specific anti-Cryptosporidium monoclonal antibodies (IgG3). The electrochemical impedance spectroscopy (EIS) was employed to quantitate C. parvum in the range of 0 to 300 oocysts, with a detection limit of approximately 20 oocysts/5 µL. The high sensitivity and specificity of the developed label-free electrochemical biosensor suggest that this novel platform is a significant step towards the development of fast, real-time, inexpensive and label-free sensing tool for early warning and immediate on-site detection of C. parvum oocysts in water samples, as compared to the traditional methods (such as PCR and microscopy). Furthermore, under optimized conditions, this label-free biosensor can be extended to detect other analytes and biomarkers for environmental and biomedical analyses.
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Affiliation(s)
- George S Luka
- School of Engineering, University of British Columbia, 333 University Way, Kelowna, BC, V1V1V7, Canada
| | - Homayoun Najjaran
- School of Engineering, University of British Columbia, 333 University Way, Kelowna, BC, V1V1V7, Canada
| | - Mina Hoorfar
- School of Engineering, University of British Columbia, 333 University Way, Kelowna, BC, V1V1V7, Canada.
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10
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Krishnamoorthy R, Athinarayanan J, Periyasamy VS, Alshuniaber MA, Alshammari G, Hakeem MJ, Ahmed MA, Alshatwi AA. Antibacterial Mechanisms of Zinc Oxide Nanoparticle against Bacterial Food Pathogens Resistant to Beta-Lactam Antibiotics. Molecules 2022; 27:2489. [PMID: 35458685 PMCID: PMC9032754 DOI: 10.3390/molecules27082489] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Revised: 03/24/2022] [Accepted: 04/08/2022] [Indexed: 12/22/2022] Open
Abstract
The increase in β-lactam-resistant Gram-negative bacteria is a severe recurrent problem in the food industry for both producers and consumers. The development of nanotechnology and nanomaterial applications has transformed many features in food science. The antibacterial activity of zinc oxide nanoparticles (ZnO NPs) and their mechanism of action on β-lactam-resistant Gram-negative food pathogens, such as Escherichia coli, Pseudomonas aeruginosa, Salmonella typhi, Serratia marcescens, Klebsiella pneumoniae, and Proteus mirabilis, are investigated in the present paper. The study results demonstrate that ZnO NPs possesses broad-spectrum action against these β-lactamase-producing strains. The minimal inhibitory and minimal bactericidal concentrations vary from 0.04 to 0.08 and 0.12 to 0.24 mg/mL, respectively. The ZnO NPs elevate the level of reactive oxygen species (ROS) and malondialdehyde in the bacterial cells as membrane lipid peroxidation. It has been confirmed from the transmission electron microscopy image of the treated bacterial cells that ZnO NPs diminish the permeable membrane, denature the intracellular proteins, cause DNA damage, and cause membrane leakage. Based on these findings, the action of ZnO NPs has been attributed to the fact that broad-spectrum antibacterial action against β-lactam-resistant Gram-negative food pathogens is mediated by Zn2+ ion-induced oxidative stress, actions via lipid peroxidation and membrane damage, subsequently resulting in depletion, leading to β-lactamase enzyme inhibition, intracellular protein inactivation, DNA damage, and eventually cell death. Based on the findings of the present study, ZnO NPs can be recommended as potent broad-spectrum antibacterial agents against β-lactam-resistant Gram-negative pathogenic strains.
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Affiliation(s)
- Rajapandiyan Krishnamoorthy
- Nanobiotechnology and Molecular Biology Research Lab, Department of Food Science and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia or (J.A.); or (V.S.P.); (M.A.A.)
| | - Jegan Athinarayanan
- Nanobiotechnology and Molecular Biology Research Lab, Department of Food Science and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia or (J.A.); or (V.S.P.); (M.A.A.)
| | - Vaiyapuri Subbarayan Periyasamy
- Nanobiotechnology and Molecular Biology Research Lab, Department of Food Science and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia or (J.A.); or (V.S.P.); (M.A.A.)
| | - Mohammad A. Alshuniaber
- Nanobiotechnology and Molecular Biology Research Lab, Department of Food Science and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia or (J.A.); or (V.S.P.); (M.A.A.)
| | - Ghedeir Alshammari
- Department of Food and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia; (G.A.); (M.J.H.); (M.A.A.)
| | - Mohammed Jamal Hakeem
- Department of Food and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia; (G.A.); (M.J.H.); (M.A.A.)
| | - Mohammed Asif Ahmed
- Department of Food and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia; (G.A.); (M.J.H.); (M.A.A.)
| | - Ali A. Alshatwi
- Nanobiotechnology and Molecular Biology Research Lab, Department of Food Science and Nutrition, College of Food and Agriculture Sciences, King Saud University, Riyadh 11541, Saudi Arabia or (J.A.); or (V.S.P.); (M.A.A.)
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11
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POUYAMANESH M, AHARI H, ANVAR AA, KARIM G. Packaging based on Ag-Low Density Polyethylene for shelf-life extension of pasteurized and traditional butters at refrigerated temperature. FOOD SCIENCE AND TECHNOLOGY 2022. [DOI: 10.1590/fst.67020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Cyclic strand displacement polymerase reaction to turn-on molecular beacons for rapid detection of Staphylococcus aureus. FOOD BIOSCI 2021. [DOI: 10.1016/j.fbio.2021.101405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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13
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14
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Advances in the detection of virulence genes of Staphylococcus aureus originate from food. FOOD SCIENCE AND HUMAN WELLNESS 2020. [DOI: 10.1016/j.fshw.2019.12.004] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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15
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Li Y, Wang J, Wang S, Wang J. Rolling circle amplification based colorimetric determination of Staphylococcus aureus. Mikrochim Acta 2020; 187:119. [PMID: 31927667 DOI: 10.1007/s00604-019-4082-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2019] [Accepted: 12/10/2019] [Indexed: 11/30/2022]
Abstract
A colorimetric microplate assay for determination of Staphylococcus aureus DNA is described. Linear padlock probes were designed to recognize target sequences. After DNA binding, the linear padlock probes were circularized by ligation and then hybridize with biotin-labeled capture probes. Biotin-labeled capture probes act as primers to initiate the RCA. The biotin-labeled RCA products hybridize with digoxin-labeled signal probes fixed on streptavidin-functionalized wells of a 96-well plate. To enhance sensitivity, an AuNP-anti-digoxigenin-POx-HRP conjugate was added to the wells and then bound to digoxin-labeled signalling probes. The oxidation of tetramethylbenzidine (TMB) by H2O2 produces a color change from colorless to blue via HRP catalysis. After the reaction was terminated, absorbance is measured at 450 nm. For target sequences of Staphylococcus aureus, the detection limit is 1.2 pM. For genomic DNA, the detection limit is 7.4 pg.μL-1. The potential application of the method was verified by analyzing spiked food samples. Graphical abstractSchematic representation of rolling circle amplification and functionalized AuNP-based colorimetric determination of Staphylococcus aureus. The method uses streptavidin-functionalized 96-well plates and RCA as a molecular tool and AuNP-anti-digoxigenin-POx-HRP as signal transduction markers to increase sensitivity.
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Affiliation(s)
- Yanan Li
- State Key Laboratory for Food Nutrition and Safety, College of Food Science and Engineering, Tianjin University of Science and Technology, 29 The Thirteenth Road, Tianjin Economy and Technology Development Area, Tianjin, 300457, People's Republic of China
| | - Junying Wang
- Chinese Academy of Agricultural Sciences, Biotechnology Research Institute, Haidian District, Beijing, 010010, People's Republic of China
| | - Shuo Wang
- Medical college, Nankai University, No.38 Tongyan Road, Jinnan District, Tianjin, 300350, People's Republic of China.
| | - Junping Wang
- State Key Laboratory for Food Nutrition and Safety, College of Food Science and Engineering, Tianjin University of Science and Technology, 29 The Thirteenth Road, Tianjin Economy and Technology Development Area, Tianjin, 300457, People's Republic of China.
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16
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Microfluidic-Based Approaches for Foodborne Pathogen Detection. Microorganisms 2019; 7:microorganisms7100381. [PMID: 31547520 PMCID: PMC6843441 DOI: 10.3390/microorganisms7100381] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 09/15/2019] [Accepted: 09/16/2019] [Indexed: 12/18/2022] Open
Abstract
Food safety is of obvious importance, but there are frequent problems caused by foodborne pathogens that threaten the safety and health of human beings worldwide. Although the most classic method for detecting bacteria is the plate counting method, it takes almost three to seven days to get the bacterial results for the detection. Additionally, there are many existing technologies for accurate determination of pathogens, such as polymerase chain reaction (PCR), enzyme linked immunosorbent assay (ELISA), or loop-mediated isothermal amplification (LAMP), but they are not suitable for timely and rapid on-site detection due to time-consuming pretreatment, complex operations and false positive results. Therefore, an urgent goal remains to determine how to quickly and effectively prevent and control the occurrence of foodborne diseases that are harmful to humans. As an alternative, microfluidic devices with miniaturization, portability and low cost have been introduced for pathogen detection. In particular, the use of microfluidic technologies is a promising direction of research for this purpose. Herein, this article systematically reviews the use of microfluidic technology for the rapid and sensitive detection of foodborne pathogens. First, microfluidic technology is introduced, including the basic concepts, background, and the pros and cons of different starting materials for specific applications. Next, the applications and problems of microfluidics for the detection of pathogens are discussed. The current status and different applications of microfluidic-based technologies to distinguish and identify foodborne pathogens are described in detail. Finally, future trends of microfluidics in food safety are discussed to provide the necessary foundation for future research efforts.
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17
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Synthesis, structure and antibacterial activity of a copper(II) coordination polymer based on thiophene-2,5-dicarboxylate ligand. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.03.039] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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18
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Bai H, Zhao F, Li M, Qin L, Yu H, Lu L, Zhang T. Citric acid can force Staphylococcus aureus into viable but nonculturable state and its characteristics. Int J Food Microbiol 2019; 305:108254. [PMID: 31238194 DOI: 10.1016/j.ijfoodmicro.2019.108254] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Revised: 06/15/2019] [Accepted: 06/17/2019] [Indexed: 12/11/2022]
Abstract
Pathogens in viable but nonculturable (VBNC) state can escape traditional detection methods based on culturable ability, thus bringing risks to food safety and human health. Considering Staphylococcus aureus as a kind of primary foodborne pathogen, this study attempted to investigate whether citric acid, a food additive commonly used, can force S. aureus into VBNC state along with low temperature. Treated with citric acid solution (pH 4.0) at 4 °C, S. aureus was confirmed to enter into VBNC state after induction for 18 days. Meanwhile, resuscitation was achieved in culture medium rather than in nutrition-free saline solution. In VBNC cells, ATP concentration still maintained at a high level, as about two-thirds of exponential-phase cells. For survival, intracellular structure of VBNC cells changed remarkably, including irregular cell shape, denser cytoplasm, space between cell wall and cell membrane, and decreased density of nuclear region. Notably, resistance of VBNC cells to simulated gastric fluid improved when compared with exponential-phase cells. What are noted above suggests that VBNC state adopted by S. aureus might be a survival strategy to the adverse environment (acidity stress and low temperature). In conclusion, our study sounds an alarm for the safety of citric acid-containing foods.
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Affiliation(s)
- Hong Bai
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China
| | - Feng Zhao
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China.
| | - Meng Li
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China
| | - Liangyun Qin
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China
| | - Huilin Yu
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China
| | - Linhan Lu
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China
| | - Tiehua Zhang
- College of Food Science and Engineering, Jilin University, 5333 Xi'an Road, Changchun 130062, PR China
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19
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Han Q, Wang X, Liu X, Xiao W, Cai S, Wang C, Yang R. Controllable fabrication of magnetic core–shell nanocomposites with high peroxide mimetic properties for bacterial detection and antibacterial applications. J Mater Chem B 2019; 7:1124-1132. [DOI: 10.1039/c8tb02834f] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Pathogenic bacterial infection has become a growing threat to public health; therefore, exploration of a sensitive and specific method for the identification of bacteria is very important.
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Affiliation(s)
- Qiusen Han
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
| | - Xinhuan Wang
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
| | - Xueliang Liu
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
| | - Wei Xiao
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
| | - Shuangfei Cai
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
| | - Chen Wang
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
| | - Rong Yang
- CAS Key Lab for Biomedical Effects of Nanomaterials and Nanosafety
- Center of Materials Science and Optoelectronics Engineering
- CAS Center for Excellence in Nanoscience
- National Center for Nanoscience and Technology
- University of Chinese Academy of Sciences
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20
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Wei C, Li M, Zhao X. Surface-Enhanced Raman Scattering (SERS) With Silver Nano Substrates Synthesized by Microwave for Rapid Detection of Foodborne Pathogens. Front Microbiol 2018; 9:2857. [PMID: 30619101 PMCID: PMC6300495 DOI: 10.3389/fmicb.2018.02857] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Accepted: 11/06/2018] [Indexed: 12/30/2022] Open
Abstract
Rapid and sensitive methods have been developed to detect foodborne pathogens, a development that is important for food safety. The aim of this study is to explore Surface-enhanced Raman scattering (SERS) with silver nano substrates to detect and identify the following three foodborne pathogens: Escherichia coli O157: H7, Staphylococcus aureus and Salmonella. All the cells were resuspended with 10 mL silver colloidal nanoparticles, making a concentration of 107 CFU/mL, and were then exposed to 785 nm laser excitation. In this study, the results showed that all the bacteria can be sensitively and reproducibly detected directly by SERS. The distinctive differences can be observed in the SERS spectral data of the three food-borne pathogens, and the silver colloidal nanoparticles can be used as highly sensitive SERS-active substrates. In addition, the assay time required only a few minutes, which indicated that SERS coupled with the silver colloidal nanoparticles is a promising method for the detection and characterization of food-borne pathogens. At the same time, principle component analysis (PCA) and hierarchical cluster analysis (HCA) made the different bacterial strains clearly differentiated based on the barcode spectral data reduction. Therefore, the SERS methods hold great promise for the detection and identification of food-borne pathogens and even for applications in food safety.
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Affiliation(s)
| | | | - Xihong Zhao
- Research Center for Environmental Ecology and Engineering, Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, China
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21
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Becheva Z, Ivanov Y, Gabrovska K, Godjevargova T. Rapid immunofluorescence assay for staphylococcal enterotoxin A using magnetic nanoparticles. Int J Food Sci Technol 2018. [DOI: 10.1111/ijfs.14018] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zlatina Becheva
- Department of Biotechnology University of “Prof. Dr Assen Zlatarov” 8010 Burgas Bulgaria
| | - Yavor Ivanov
- Department of Biotechnology University of “Prof. Dr Assen Zlatarov” 8010 Burgas Bulgaria
| | - Katya Gabrovska
- Department of Biotechnology University of “Prof. Dr Assen Zlatarov” 8010 Burgas Bulgaria
| | - Tzonka Godjevargova
- Department of Biotechnology University of “Prof. Dr Assen Zlatarov” 8010 Burgas Bulgaria
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22
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Zhao X, Yu Z, Xu Z. Study the Features of 57 Confirmed CRISPR Loci in 38 Strains of Staphylococcus aureus. Front Microbiol 2018; 9:1591. [PMID: 30093886 PMCID: PMC6070637 DOI: 10.3389/fmicb.2018.01591] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Accepted: 06/26/2018] [Indexed: 12/26/2022] Open
Abstract
Staphylococcus aureus is a foodborne pathogen that causes food contamination and food poisoning, which poses great harm to health, agriculture and other hosts. Clustered regularly interspaced short palindromic repeats (CRISPR) are a recently discovered bacterial immune system that resists foreign genes such as phage DNA. This system inhibits the transfer of specific movable genetic elements that match the CRISPR spacer sequences, thereby preventing the spread of drug-resistant genes between pathogens. In this study, 57 CRISPR loci were screened from 38 strains of S. aureus based on the CRISPR database, and bioinformatics tools were used to investigate the structural features and potential functions of S. aureus CRISPR loci. The results showed that most strains contained only one CRISPR locus, a few strains contained multiple loci with sparsely distributed sites. These loci mainly included highly conserved direct repeat sequences and highly variable spacer sequences, as well as polymorphic cas genes. In addition, the analysis of secondary structure of direct repeat RNA showed that all sites can form stable RNA secondary structure. The results of constructing phylogenetic tree based on spacer sequence showed that some strains contained a high degree of phylogenetic relationship, while the differences among other strains in evolutionary processes were quite obvious. Of the 57 CRISPR loci identified, only the cas gene was found near the 4 CRISPR loci.
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Affiliation(s)
- Xihong Zhao
- Research Center for Environmental Ecology and Engineering, Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, China
| | - Zhixue Yu
- Research Center for Environmental Ecology and Engineering, Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, China
| | - Zhenbo Xu
- School of Food Science and Engineering, South China University of Technology, Guangzhou, China
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23
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Al-Shabib NA, Husain FM, Khan RA, Khan MS, Alam MZ, Ansari FA, Laeeq S, Zubair M, Shahzad SA, Khan JM, Alsalme A, Ahmad I. Interference of phosphane copper (I) complexes of β-carboline with quorum sensing regulated virulence functions and biofilm in foodborne pathogenic bacteria: A first report. Saudi J Biol Sci 2018; 26:308-316. [PMID: 31485170 PMCID: PMC6717094 DOI: 10.1016/j.sjbs.2018.04.013] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2017] [Revised: 03/01/2018] [Accepted: 04/15/2018] [Indexed: 11/19/2022] Open
Abstract
Foodborne pathogens are one of the major cause of food-related diseases and food poisoning. Bacterial biofilms and quorum sensing (QS) mechanism of cell–cell communication have also been found to be associated with several outbreaks of foodborne diseases and are great threat to food safety. Therefore, In the present study, we investigated the activity of three tetrahedrally coordinated copper(I) complexes against quorum sensing and biofilms of foodborne bacteria. All the three complexes demonstrated similar antimicrobial properties against the selected pathogens. Concentration below the MIC i.e. at sub-MICs all the three complexes interfered significantly with the quorum sensing regulated functions in C. violaceum (violacein), P. aeruginosa (elastase, pyocyanin and alginate production) and S. marcescens (prodigiosin). The complexes demonstrated potent broad-spectrum biofilm inhibition in Pseudomonas aeruginosa, E. coli, Chromobacterium violaceum, Serratia marcescens, Klebsiella pneumoniae and Listeria monocytogenes. Biofilm inhibition was visualized using SEM and CLSM images. Action of the copper(I) complexes on two key QS regulated functions contributing to biofilm formation i.e. EPS production and swarming motility was also studied and statistically significant reduction was recorded. These results could form the basis for development of safe anti-QS and anti-biofilm agents that can be utilized in the food industry as well as healthcare sector to prevent food-associated diseases.
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Affiliation(s)
- Nasser A Al-Shabib
- Department of Food Science and Nutrition, College of Food and Agriculture, King Saud University, Riyadh 11451, Saudi Arabia
| | - Fohad Mabood Husain
- Department of Food Science and Nutrition, College of Food and Agriculture, King Saud University, Riyadh 11451, Saudi Arabia
| | - Rais Ahmad Khan
- Department of Chemistry, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Mohammad Shavez Khan
- Department of Agricultural Microbiology, Aligarh Muslim University, Aligarh 202002, India
| | - Mohammad Zubair Alam
- King Fahd Medical Research Centre, King AbdulAziz University, Jeddah, Saudi Arabia
| | - Firoz Ahmad Ansari
- Department of Agricultural Microbiology, Aligarh Muslim University, Aligarh 202002, India
| | - Sameen Laeeq
- Department of Applied Chemistry, Aligarh Muslim University, Aligarh 202002, India
| | - Mohammad Zubair
- Department of Medical Microbiology, Faculty of Medicine, University of Tabuk, 71491, Saudi Arabia
| | - Syed Ali Shahzad
- Department of Food Science and Nutrition, College of Food and Agriculture, King Saud University, Riyadh 11451, Saudi Arabia
| | - Javed Masood Khan
- Department of Food Science and Nutrition, College of Food and Agriculture, King Saud University, Riyadh 11451, Saudi Arabia
| | - Ali Alsalme
- Department of Chemistry, College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Iqbal Ahmad
- Department of Agricultural Microbiology, Aligarh Muslim University, Aligarh 202002, India
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24
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Hait J, Tallent S, Ferguson M. Evaluation of enumeration and MPN prediction methods for Staphylococcus aureus. J Food Saf 2018. [DOI: 10.1111/jfs.12437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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25
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Refining the Results of a Classical SELEX Experiment by Expanding the Sequence Data Set of an Aptamer Pool Selected for Protein A. Int J Mol Sci 2018; 19:ijms19020642. [PMID: 29495282 PMCID: PMC5855864 DOI: 10.3390/ijms19020642] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Revised: 02/09/2018] [Accepted: 02/19/2018] [Indexed: 02/07/2023] Open
Abstract
New, as yet undiscovered aptamers for Protein A were identified by applying next generation sequencing (NGS) to a previously selected aptamer pool. This pool was obtained in a classical SELEX (Systematic Evolution of Ligands by EXponential enrichment) experiment using the FluMag-SELEX procedure followed by cloning and Sanger sequencing. PA#2/8 was identified as the only Protein A-binding aptamer from the Sanger sequence pool, and was shown to be able to bind intact cells of Staphylococcus aureus. In this study, we show the extension of the SELEX results by re-sequencing of the same aptamer pool using a medium throughput NGS approach and data analysis. Both data pools were compared. They confirm the selection of a highly complex and heterogeneous oligonucleotide pool and show consistently a high content of orphans as well as a similar relative frequency of certain sequence groups. But in contrast to the Sanger data pool, the NGS pool was clearly dominated by one sequence group containing the known Protein A-binding aptamer PA#2/8 as the most frequent sequence in this group. In addition, we found two new sequence groups in the NGS pool represented by PA-C10 and PA-C8, respectively, which also have high specificity for Protein A. Comparative affinity studies reveal differences between the aptamers and confirm that PA#2/8 remains the most potent sequence within the selected aptamer pool reaching affinities in the low nanomolar range of KD = 20 ± 1 nM.
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26
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Wei C, Zhong J, Hu T, Zhao X. Simultaneous detection of Escherichia coli O157:H7, Staphylococcus aureus and Salmonella by multiplex PCR in milk. 3 Biotech 2018; 8:76. [PMID: 29354387 PMCID: PMC5767162 DOI: 10.1007/s13205-018-1086-5] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Accepted: 01/02/2018] [Indexed: 01/08/2023] Open
Abstract
Escherichia coli O157:H7, Staphylococcus aureus, and Salmonella are food-borne pathogens that cause serious gastrointestinal illness and frequent food safety accidents. This study aimed to develop a practical multiplex polymerase chain reaction (mPCR) technique for the simultaneous detection of these food-borne pathogens in culture broth and artificial food matrix. Pathogen-specific DNA sequences in the rfbE, nuc, and invA genes were used as targets to design primers for the identification of E. coli O157:H7, S. aureus, and Salmonella, respectively. As expected, the method produced species-specific bands of amplified products without any contaminating non-specific bands. The highest species specificity was established with primer concentrations of 0.1, 0.2, and 0.4 μM for E. coli O157:H7, S. aureus, and Salmonella, correspondingly. The detection sensitivity of this assay was 103 CFU/mL in culture broth, and the limit of detection was consistent with singleplex PCR in the food sample. The mPCR assay proposed here is an easy and convenient detection method, which will be valuable for microbial epidemiology and food safety investigations.
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Affiliation(s)
- Caijiao Wei
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, Research Center for Environmental Ecology and Engineering, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205 China
| | - Junliang Zhong
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, Research Center for Environmental Ecology and Engineering, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205 China
| | - Ting Hu
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, Research Center for Environmental Ecology and Engineering, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205 China
| | - Xihong Zhao
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor & Green Chemical Technology, Research Center for Environmental Ecology and Engineering, School of Environmental Ecology and Biological Engineering, Wuhan Institute of Technology, Wuhan, 430205 China
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Reich P, Stoltenburg R, Strehlitz B, Frense D, Beckmann D. Development of An Impedimetric Aptasensor for the Detection of Staphylococcus aureus. Int J Mol Sci 2017; 18:ijms18112484. [PMID: 29160851 PMCID: PMC5713450 DOI: 10.3390/ijms18112484] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Revised: 11/13/2017] [Accepted: 11/13/2017] [Indexed: 12/19/2022] Open
Abstract
In combination with electrochemical impedance spectroscopy, aptamer-based biosensors are a powerful tool for fast analytical devices. Herein, we present an impedimetric aptasensor for the detection of the human pathogen Staphylococcus aureus. The used aptamer targets protein A, a surface bound virulence factor of S. aureus. The thiol-modified protein A-binding aptamer was co-immobilized with 6-mercapto-1-hexanol onto gold electrodes by self-assembly. Optimization of the ratio of aptamer to 6-mercapto-1-hexanol resulted in an average density of 1.01 ± 0.44 × 1013 aptamer molecules per cm². As shown with quartz crystal microbalance experiments, the immobilized aptamer retained its functionality to bind recombinant protein A. Our impedimetric biosensor is based on the principle that binding of target molecules to the immobilized aptamer decreases the electron transfer between electrode and ferri-/ferrocyanide in solution, which is measured as an increase of impedance. Microscale thermophoresis measurements showed that addition of the redox probe ferri-/ferrocyanide has no influence on the binding of aptamer and its target. We demonstrated that upon incubation with various concentrations of S. aureus, the charge-transfer resistance increased proportionally. The developed biosensor showed a limit of detection of 10 CFU·mL-1 and results were available within 10 minutes. The biosensor is highly selective, distinguishing non-target bacteria such as Escherichia coli and Staphylococcus epidermidis. This work highlights the immense potential of impedimetric aptasensors for future biosensing applications.
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Affiliation(s)
- Peggy Reich
- Institut für Bioprozess- und Analysenmesstechnik e.V., 37308 Heilbad Heiligenstadt, Germany.
| | | | - Beate Strehlitz
- UFZ-Helmholtz Centre for Environmental Research, 04318 Leipzig, Germany.
| | - Dieter Frense
- Institut für Bioprozess- und Analysenmesstechnik e.V., 37308 Heilbad Heiligenstadt, Germany.
| | - Dieter Beckmann
- Institut für Bioprozess- und Analysenmesstechnik e.V., 37308 Heilbad Heiligenstadt, Germany.
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Zhao X, Zhong J, Wei C, Lin CW, Ding T. Current Perspectives on Viable but Non-culturable State in Foodborne Pathogens. Front Microbiol 2017; 8:580. [PMID: 28421064 PMCID: PMC5378802 DOI: 10.3389/fmicb.2017.00580] [Citation(s) in RCA: 187] [Impact Index Per Article: 26.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Accepted: 03/21/2017] [Indexed: 01/24/2023] Open
Abstract
The viable but non-culturable (VBNC) state, a unique state in which a number of bacteria respond to adverse circumstances, was first discovered in 1982. Unfortunately, it has been reported that many foodborne pathogens can be induced to enter the VBNC state by the limiting environmental conditions during food processing and preservation, such as extreme temperatures, drying, irradiation, pulsed electric field, and high pressure stress, as well as the addition of preservatives and disinfectants. After entering the VBNC state, foodborne pathogens will introduce a serious crisis to food safety and public health because they cannot be detected using conventional plate counting techniques. This review provides an overview of the various features of the VBNC state, including the biological characteristics, induction and resuscitation factors, formation and resuscitation mechanisms, detection methods, and relationship to food safety.
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Affiliation(s)
- Xihong Zhao
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor and Green Chemical Technology, School of Chemical Engineering and Pharmacy, Wuhan Institute of TechnologyWuhan, China
| | - Junliang Zhong
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor and Green Chemical Technology, School of Chemical Engineering and Pharmacy, Wuhan Institute of TechnologyWuhan, China
| | - Caijiao Wei
- Key Laboratory for Green Chemical Process of Ministry of Education, Key Laboratory for Hubei Novel Reactor and Green Chemical Technology, School of Chemical Engineering and Pharmacy, Wuhan Institute of TechnologyWuhan, China
| | - Chii-Wann Lin
- Institute of Biomedical Engineering, National Taiwan UniversityTaipei, Taiwan
| | - Tian Ding
- Department of Food Science and Nutrition, Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang UniversityHangzhou, China
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Zhao X, Zhao F, Wang J, Zhong N. Biofilm formation and control strategies of foodborne pathogens: food safety perspectives. RSC Adv 2017. [DOI: 10.1039/c7ra02497e] [Citation(s) in RCA: 115] [Impact Index Per Article: 16.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Foodborne pathogens are the main factors behind foodborne diseases and food poisoning and thus pose a great threat to food safety.
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Affiliation(s)
- Xihong Zhao
- Research Center for Environmental Ecology and Engineering
- Key Laboratory for Green Chemical Process of Ministry of Education
- Key Laboratory for Hubei Novel Reactor & Green Chemical Technology
- School of Chemical Engineering and Pharmacy
- Wuhan Institute of Technology
| | - Fenghuan Zhao
- Research Center for Environmental Ecology and Engineering
- Key Laboratory for Green Chemical Process of Ministry of Education
- Key Laboratory for Hubei Novel Reactor & Green Chemical Technology
- School of Chemical Engineering and Pharmacy
- Wuhan Institute of Technology
| | - Jun Wang
- College of Food Science and Engineering
- Qingdao Agricultural University
- Qingdao
- P. R. China
| | - Nanjing Zhong
- School of Food Science
- Guangdong Pharmaceutical University
- Zhongshan 528458
- P. R. China
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Zhao X, Lin CW. Rapid label-free visual detection of KRAS mutations using peptide nucleic acid and unmodified gold nanoparticles. RSC Adv 2017. [DOI: 10.1039/c7ra09088a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Colorectal cancer (CRC) is among the most commonly diagnosed cancers worldwide.
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Affiliation(s)
- Xihong Zhao
- Key Laboratory for Green Chemical Process of Ministry of Education
- Key Laboratory for Hubei Novel Reactor & Green Chemical Technology
- Research Center for Environmental Ecology and Engineering
- School of Chemical Engineering and Pharmacy
- Wuhan Institute of Technology
| | - Chii-Wann Lin
- Institute of Biomedical Engineering
- National Taiwan University
- Taipei 10617
- Taiwan
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Zhao X, Chang CC, Chuang TL, Lin CW. Detection of KRAS mutations of colorectal cancer with peptide-nucleic-acid-mediated real-time PCR clamping. BIOTECHNOL BIOTEC EQ 2016. [DOI: 10.1080/13102818.2016.1228479] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Affiliation(s)
- Xihong Zhao
- Key Laboratory for Green Chemical Process of Ministry of Education, Hubei Key Laboratory of Novel Reactor and Green Chemical Technology, School of Chemical Engineering and Pharmacy, Wuhan Institute of Technology , Wuhan, China
- Institute of Biomedical Engineering, National Taiwan University , Taipei, Taiwan
| | - Chia-Chen Chang
- Institute of Biomedical Engineering, National Taiwan University , Taipei, Taiwan
| | - Tsung-Liang Chuang
- Institute of Biomedical Engineering, National Taiwan University , Taipei, Taiwan
| | - Chii-Wann Lin
- Institute of Biomedical Engineering, National Taiwan University , Taipei, Taiwan
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