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Shamloo-Dashtpagerdi R, Tanin MJ, Aliakbari M, Saini DK. Unveiling the role of the ERD15 gene in wheat's tolerance to combined drought and salinity stress: a meta-analysis of QTL and RNA-Seq data. PHYSIOLOGIA PLANTARUM 2024; 176:e14570. [PMID: 39382027 DOI: 10.1111/ppl.14570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 09/26/2024] [Accepted: 09/26/2024] [Indexed: 10/10/2024]
Abstract
The coexistence of drought and salinity stresses in field conditions significantly hinders wheat (Triticum aestivum L.) productivity. Understanding the molecular mechanisms governing response and tolerance to these stresses is crucial for developing resilient wheat varieties. Our research, employing a combination of meta-QTL and meta-RNA-Seq transcriptome analyses, has uncovered the genome functional landscape of wheat in response to drought and salinity. We identified 118 meta-QTLs (MQTLs) distributed across all 21 wheat chromosomes, with ten designated as the most promising. Additionally, we found 690 meta-differentially expressed genes (mDEGs) shared between drought and salinity stress. Notably, our findings highlight the Early Responsive to Dehydration 15 (ERD15) gene, located in one of the most promising MQTLs, as a key gene in the shared gene network of drought and salinity stress. ERD15, differentially expressed between contrasting wheat genotypes under combined stress conditions, significantly regulates water relations, photosynthetic activity, antioxidant activity, and ion homeostasis. These findings not only provide valuable insights into the molecular genetic mechanisms underlying combined stress tolerance in wheat but also hold the potential to contribute significantly to the development of stress-resilient wheat varieties.
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Affiliation(s)
| | - Mohammad Jafar Tanin
- Division of Plant Science and Technology, College of Agriculture, Food, and Natural Resources, University of Missouri, Columbia, MO, USA
- Department of Plant Breeding and Genetics, College of Agriculture, Punjab Agricultural University, Ludhiana, Punjab, India
| | - Massume Aliakbari
- Department of Crop Production and Plant Breeding, Shiraz University, Shiraz, Iran
| | - Dinesh Kumar Saini
- Department of Plant Breeding and Genetics, College of Agriculture, Punjab Agricultural University, Ludhiana, Punjab, India
- Department of Plant and Soil Science, Texas Tech University, Lubbock, Texas, USA
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2
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Lian L, Gu F, Du M, Lin Y, Chang H, Wang J. The combination of high oxygen and nanocomposite packaging alleviated quality deterioration by promoting antioxidant capacity and phenylpropane metabolism in Volvariella volvacea. Food Chem 2024; 439:138092. [PMID: 38039611 DOI: 10.1016/j.foodchem.2023.138092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 11/21/2023] [Accepted: 11/25/2023] [Indexed: 12/03/2023]
Abstract
Volvariella volvacea is a highly perishable mushroom that severely affects its postharvest commercial value. This study aimed to investigate the impact of high oxygen (O2) levels combined with nanocomposite packaging on the shelf-life quality of V. volvacea. Results showed that treatment with high concentrations of O2 (80% and 100% O2) and nanocomposite packaging effectively delayed the quality deterioration of V. volvacea, resulting in better postharvest appearance, higher firmness, lower weight loss, malondialdehyde (MDA) content, and leakage of membrane electrolytes. Further analysis revealed the combination treatments ameliorated oxidative stress by inducing antioxidant enzymes and the glutathione-ascorbate (GSH-AsA) cycle at both enzymatic and transcriptional levels, thereby activating the antioxidant system. Additionally, the treatments enhanced activities of key enzymes in phenylpropane metabolism, leading to a reduction in the decrease of total phenolics and flavonoids. This work provides new insights into the development of postharvest technologies to prolong the storage life of V. volvacea.
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Affiliation(s)
- Lingdan Lian
- Department of Bioengineering, College of Food Science, South China Agricultural University, Guangzhou 510642, PR China
| | - Fengju Gu
- Department of Bioengineering, College of Food Science, South China Agricultural University, Guangzhou 510642, PR China
| | - Minru Du
- Department of Bioengineering, College of Food Science, South China Agricultural University, Guangzhou 510642, PR China
| | - Yimei Lin
- Department of Bioengineering, College of Food Science, South China Agricultural University, Guangzhou 510642, PR China
| | - Hao Chang
- Department of Bioengineering, College of Food Science, South China Agricultural University, Guangzhou 510642, PR China
| | - Jie Wang
- Department of Bioengineering, College of Food Science, South China Agricultural University, Guangzhou 510642, PR China.
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Sugumar T, Shen G, Smith J, Zhang H. Creating Climate-Resilient Crops by Increasing Drought, Heat, and Salt Tolerance. PLANTS (BASEL, SWITZERLAND) 2024; 13:1238. [PMID: 38732452 PMCID: PMC11085490 DOI: 10.3390/plants13091238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2024] [Revised: 04/19/2024] [Accepted: 04/22/2024] [Indexed: 05/13/2024]
Abstract
Over the years, the changes in the agriculture industry have been inevitable, considering the need to feed the growing population. As the world population continues to grow, food security has become challenged. Resources such as arable land and freshwater have become scarce due to quick urbanization in developing countries and anthropologic activities; expanding agricultural production areas is not an option. Environmental and climatic factors such as drought, heat, and salt stresses pose serious threats to food production worldwide. Therefore, the need to utilize the remaining arable land and water effectively and efficiently and to maximize the yield to support the increasing food demand has become crucial. It is essential to develop climate-resilient crops that will outperform traditional crops under any abiotic stress conditions such as heat, drought, and salt, as well as these stresses in any combinations. This review provides a glimpse of how plant breeding in agriculture has evolved to overcome the harsh environmental conditions and what the future would be like.
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Affiliation(s)
- Tharanya Sugumar
- Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA; (T.S.); (J.S.)
| | - Guoxin Shen
- Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China;
| | - Jennifer Smith
- Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA; (T.S.); (J.S.)
| | - Hong Zhang
- Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA; (T.S.); (J.S.)
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Shamloo-Dashtpagerdi R, Lindlöf A, Nouripour-Sisakht J. Unraveling the regulatory role of MYC2 on ASMT gene expression in wheat: Implications for melatonin biosynthesis and drought tolerance. PHYSIOLOGIA PLANTARUM 2023; 175:e14015. [PMID: 37882265 DOI: 10.1111/ppl.14015] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Revised: 08/08/2023] [Accepted: 08/21/2023] [Indexed: 10/27/2023]
Abstract
Recognized for its multifaceted functions, melatonin is a hormone found in both animals and plants. In the plant kingdom, it plays diverse roles, regulating growth, development, and stress responses. Notably, melatonin demonstrates its significance by mitigating the effects of abiotic stresses like drought. However, understanding the precise regulatory mechanisms controlling melatonin biosynthesis genes, especially during monocots' response to stresses, requires further exploration. Seeking to understand the molecular basis of drought stress tolerance in wheat, we analyzed RNA-Seq libraries of wheat exposed to drought stress using bioinformatics methods. In light of our findings, we identified that the Myelocytomatosis oncogenes 2 (MYC2) transcription factor is a hub gene upstream of a main melatonin biosynthesis gene, N-acetylserotonin methyltransferase (ASMT), in the wheat drought response-gene network. Promoter analysis of the ASMT gene suggested that it might be a target gene of MYC2. We conducted a set of molecular and physiochemical assays along with robust machine learning approaches to elevate those findings further. MYC2 and ASMT were co-regulated under Jasmonate, drought, and a combination of them in the leaf tissues of wheat was detected. A meaningful correlation was observed among gene expression profiles, melatonin contents, photosynthetic activities, antioxidant enzyme activities, H2 O2 levels, and plasma membrane damage. The results indicated an evident relationship between jasmonic acid and the melatonin biosynthesis pathway. Moreover, it seems that the MYC2-ASMT module might contribute to wheat drought tolerance by regulating melatonin contents.
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Affiliation(s)
| | | | - Javad Nouripour-Sisakht
- Department of Plant Production and Genetics, College of Agricultural Engineering, Isfahan University of Technology, Isfahan, Iran
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Shamloo-Dashtpagerdi R, Shahriari AG, Tahmasebi A, Vetukuri RR. Potential role of the regulatory miR1119- MYC2 module in wheat ( Triticum aestivum L.) drought tolerance. FRONTIERS IN PLANT SCIENCE 2023; 14:1161245. [PMID: 37324698 PMCID: PMC10266357 DOI: 10.3389/fpls.2023.1161245] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 04/26/2023] [Indexed: 06/17/2023]
Abstract
MicroRNA (miRNA)-target gene modules are essential components of plants' abiotic stress signalling pathways Little is known about the drought-responsive miRNA-target modules in wheat, but systems biology approaches have enabled the prediction of these regulatory modules and systematic study of their roles in responses to abiotic stresses. Using such an approach, we sought miRNA-target module(s) that may be differentially expressed under drought and non-stressed conditions by mining Expressed Sequence Tag (EST) libraries of wheat roots and identified a strong candidate (miR1119-MYC2). We then assessed molecular and physiochemical differences between two wheat genotypes with contrasting drought tolerance in a controlled drought experiment and assessed possible relationships between their tolerance and evaluated traits. We found that the miR1119-MYC2 module significantly responds to drought stress in wheat roots. It is differentially expressed between the contrasting wheat genotypes and under drought versus non-stressed conditions. We also found significant associations between the module's expression profiles and ABA hormone content, water relations, photosynthetic activities, H2O2 levels, plasma membrane damage, and antioxidant enzyme activities in wheat. Collectively, our results suggest that a regulatory module consisting of miR1119 and MYC2 may play an important role in wheat's drought tolerance.
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Affiliation(s)
| | - Amir Ghaffar Shahriari
- Department of Agriculture and Natural Resources, Higher Education Center of Eghlid, Eghlid, Iran
| | - Aminallah Tahmasebi
- Department of Agriculture, Minab Higher Education Center, University of Hormozgan, Bandar Abbas, Iran
| | - Ramesh R. Vetukuri
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Lomma, Sweden
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Triticum aestivum: antioxidant gene profiling and morpho-physiological studies under salt stress. Mol Biol Rep 2023; 50:2569-2580. [PMID: 36626063 DOI: 10.1007/s11033-022-07990-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2022] [Accepted: 09/28/2022] [Indexed: 01/11/2023]
Abstract
BACKGROUND Soil salinity drastically reduced wheat growth and production in Pakistan. It is a need of an hour to identify the best suitable salt tolerance or resistant wheat varieties which shows good growth under salinity affected areas. In presented study, two wheat varieties Johar (salt tolerant) and Sarsabaz (salt sensitive) were examined under NaCl stress conditions. METHODS Antioxidant enzyme activities were investigated in 10-days old wheat seedlings under 200 mM NaCl stress in hydroponic conditions. To investigate the various growth parameters, antioxidant enzyme activities such as superoxide dismutase (SOD: EC 1.15.1.1), catalase (CAT: EC 1.11.1.6) and ascorbate peroxidase (APX: EC 1.11.1.11) were monitored and studied. Besides this various growth parameters such as length of the roots, shoots, as well as Physiological parameters likes lipid peroxidation by malondialdehyde (MDA), hydrogen peroxide (H2O2), and proline contents and antioxidant enzyme activities were estimated. The effect of salinity was also observed on gene transcription level and eventually expression level. RESULTS Shoot and root length were decreased in Sarsabaz variety while it showed opposite trend in johar at 200 mM salt concentration. The concentration of proline showed a noticeable rise in salt dependency. Higher concentrations of Proline in Johar were observed as compared to Sarsabaz. SOD showed the increase in activity for antioxidant enzymes. Significant increase of SOD levels were observed in shoot tissues as compared to root tissues. The results indicated that the shoots were more susceptible to salt stress. Activity of APX showed similar affects in both varieties. The production of CAT enzyme in the shoot and root tissues of both varieties showed substantial growth under increased salt stress. Furthermore, NaCl stress has increased the expression of certain genes coding for antioxidant enzymes such as catalase, superoxide dismutase, and peroxidase. Maximum expression of all the antioxidant enzyme coding genes were observed in Johar (tolerant) at 48 h exposure to salt. In contrast the expression of the all mentioned genes in Sarsabaz variety were found maximum at early hours (24 h) and gradually decreased at 48 h. CONCLUSION The study showed that the selected salt tolerant wheat variety Johar is significantly resistant to 200 mM NaCl salt level as compared to Sarsabaz.
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Dvojković K, Plavšin I, Novoselović D, Šimić G, Lalić A, Čupić T, Horvat D, Viljevac Vuletić M. Early Antioxidative Response to Desiccant-Stimulated Drought Stress in Field-Grown Traditional Wheat Varieties. PLANTS (BASEL, SWITZERLAND) 2023; 12:249. [PMID: 36678962 PMCID: PMC9867156 DOI: 10.3390/plants12020249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 12/26/2022] [Accepted: 01/02/2023] [Indexed: 06/17/2023]
Abstract
Extended drought affects the production and quality of wheat (Triticum aestivum L.), one of the world's most important food crops. Breeding for increased drought resistance is becoming increasingly important due to the rising demand for food production. Four old traditional Croatian wheat cultivars were used in the present study to examine the early antioxidant response of flag leaves to desiccant-stimulated drought stress and to identify drought-tolerant cultivars accordingly. The results indicate that the enzymatic antioxidant system plays the most significant role in the early response of adult wheat plants to drought stress and the removal of excessive H2O2, particularly GPOD and APX. Nada and Dubrava cultivars revealed the strongest activation of the enzymatic defense mechanism, which prevented H2O2 accumulation and lipid peroxidation. Additionally, the Nada cultivar also showed increased synthesis of proline and specific phenolic compounds, which both contribute to the increased stress tolerance. Among the cultivars investigated, cultivar Nada has the broadest genetic base, which may explain why it possesses the ability to activate both enzymatic and non-enzymatic defense mechanisms in an early response to drought stress. This suggests that old traditional wheat cultivars with broad genetic bases can be a valuable source of drought tolerance, which is especially important given the current climate change.
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Affiliation(s)
- Krešimir Dvojković
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Ivana Plavšin
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
- Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia
| | - Dario Novoselović
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
- Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia
| | - Gordana Šimić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Alojzije Lalić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Tihomir Čupić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Daniela Horvat
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
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8
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Saruhan Güler N, Terzi R, Demiralay M, Ozturk K, Kadioglu A. Increased dehydrin level decreases leaf rolling grade by altering the reactive oxygen species homeostasis and abscisic acid content in maize subjected to osmotic stress. 3 Biotech 2022; 12:201. [PMID: 35935540 PMCID: PMC9346039 DOI: 10.1007/s13205-022-03275-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Accepted: 07/21/2022] [Indexed: 11/01/2022] Open
Abstract
Dehydrins (DHNs) are stress proteins involved in the development of protective reactions in plants against dehydration. The relationship between DHNs and morphological responses such as leaf rolling in plants exposed to water deficit is not well known. In this study, we detected how variations in DHN levels affect the leaf rolling response in maize exposed to osmotic stress in relation to the antioxidant system and ABA level. In this context, we altered the DHN levels in maize seedlings by treatment with bio-regulators (salicylic acid and abscisic acid) under PEG6000-free and PEG6000-induced osmotic stress. When the DHN levels were increased by the bio-regulators (25 µM SA and 100 µM ABA), the relative expression level of the Zea mays dehydrin COR410 gene increased in the seedlings, while reactive oxygen species (ROS) and leaf rolling grade decreased. Moreover, induction of DHNs caused increases in the antioxidant enzyme activity and content of antioxidant substances, and very high amounts of endogenous abscisic acid. When DHN level was suppressed by a bio-regulator (200 µM SA) in the maize seedlings, dehydrin COR410 expression level decreased, while ROS and the leaf rolling grade increased. Moreover, the antioxidant enzyme activity and content of antioxidant substances decreased in the seedlings, while the amount of abscisic acid increased. Taken all together, an increase in DHN level by bio-regulator treatment can stimulate the antioxidant system, enable abscisic acid regulation, and thus reduce leaf rolling through decreased ROS levels. The results also indicated that DHNs may be involved in the signal pathways inducing expression of some genes related to leaf rolling response, possibly by modulating ROS levels, in maize seedlings exposed to osmotic stress.
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Affiliation(s)
- Neslihan Saruhan Güler
- Department of Nutrition and Dietetics, Faculty of Health Sciences, Karadeniz Technical University, Trabzon, 61080 Turkey
| | - Rabiye Terzi
- Department of Biology, Faculty of Science, Karadeniz Technical University, Trabzon, 61080 Turkey
| | - Mehmet Demiralay
- Department of Forest Engineering, Faculty of Forestry, Artvin Coruh University, Artvin, 08000 Turkey
| | - Kamil Ozturk
- Department of Biology, Faculty of Science, Karadeniz Technical University, Trabzon, 61080 Turkey
| | - Asim Kadioglu
- Department of Biology, Faculty of Science, Karadeniz Technical University, Trabzon, 61080 Turkey
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Shamloo-Dashtpagerdi R, Aliakbari M, Lindlöf A, Tahmasebi S. A systems biology study unveils the association between a melatonin biosynthesis gene, O-methyl transferase 1 (OMT1) and wheat (Triticum aestivum L.) combined drought and salinity stress tolerance. PLANTA 2022; 255:99. [PMID: 35386021 DOI: 10.1007/s00425-022-03885-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Accepted: 03/28/2022] [Indexed: 06/14/2023]
Abstract
Enhanced levels of endogenous melatonin in the root of wheat, mainly through the OMT1 gene, augment the antioxidant system, reestablish redox homeostasis and are associated with combined stress tolerance. A systems biology approach, including a collection of computational analyses and experimental assays, led us to uncover some aspects of a poorly understood phenomenon, namely wheat (Triticum aestivum L.) combined drought and salinity stress tolerance. Accordingly, a cross-study comparison of stress experiments was performed via a meta-analysis of Expressed Sequence Tags (ESTs) data from wheat roots to uncover the overlapping gene network of drought and salinity stresses. Identified differentially expressed genes were functionally annotated by gene ontology enrichment analysis and gene network analysis. Among those genes, O-methyl transferase 1 (OMT1) was highlighted as a more important (hub) gene in the dual-stress response gene network. Afterwards, the potential roles of OMT1 in mediating physiochemical indicators of stress tolerance were investigated in two wheat genotypes differing in abiotic stress tolerance. Regression analysis and correspondence analysis (CA) confirmed that the expression profiles of the OMT1 gene and variations in melatonin content, antioxidant enzyme activities, proline accumulation, H2O2 and malondialdehyde (MDA) contents are significantly associated with combined stress tolerance. These results reveal that the OMT1 gene may contribute to wheat combined drought and salinity stress tolerance through augmenting the antioxidant system and re-establishing redox homeostasis, probably via the regulation of melatonin biosynthesis as a master regulator molecule. Our findings provide new insights into the roles of melatonin in wheat combined drought and salinity stress tolerance and suggest a novel plausible regulatory node through the OMT1 gene to improve multiple-stress tolerant crops.
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Affiliation(s)
| | - Massume Aliakbari
- Department of Crop Production and Plant Breeding, Shiraz University, Shiraz, Iran
| | | | - Sirus Tahmasebi
- Seed and Plant Improvement Research Department, Fars Agricultural and Natural Resources Research and Education Center, AREEO, Shiraz, Iran
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10
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Vuković R, Čamagajevac IŠ, Vuković A, Šunić K, Begović L, Mlinarić S, Sekulić R, Sabo N, Španić V. Physiological, Biochemical and Molecular Response of Different Winter Wheat Varieties under Drought Stress at Germination and Seedling Growth Stage. Antioxidants (Basel) 2022; 11:antiox11040693. [PMID: 35453378 PMCID: PMC9028496 DOI: 10.3390/antiox11040693] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Revised: 03/29/2022] [Accepted: 03/30/2022] [Indexed: 01/24/2023] Open
Abstract
Due to climate change in recent years, there has been an increasing water deficit during the winter wheat sowing period. This study evaluated six Croatian winter wheat varieties’ physiological, biochemical, and molecular responses under two drought stress levels at the germination/seedling growth stage. Lipid peroxidation was mainly induced under both drought stress treatments, while the antioxidative response was variety-specific. The most significant role in the antioxidative response had glutathione along with the ascorbate-glutathione pathway. Under drought stress, wheat seedlings responded in proline accumulation that was correlated with the P5CS gene expression. Expression of genes encoding dehydrins (DHN5, WZY2) was highly induced under the drought stress in all varieties, while genes encoding transcription factors were differentially regulated. Expression of DREB1 was upregulated under severe drought stress in most varieties, while the expression of WRKY2 was downregulated or revealed control levels. Different mechanisms were shown to contribute to the drought tolerance in different varieties, which was mainly associated with osmotic adjustment and dehydrins expression. Identifying different mechanisms in drought stress response would advance our understanding of the complex strategies contributing to wheat tolerance to drought in the early growth stage and could contribute to variety selection useful for developing new drought-tolerant varieties.
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Affiliation(s)
- Rosemary Vuković
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Ivna Štolfa Čamagajevac
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Ana Vuković
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Katarina Šunić
- Department of Small Cereal Crops, Agricultural Institute Osijek, 31000 Osijek, Croatia;
| | - Lidija Begović
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Selma Mlinarić
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Ramona Sekulić
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Nikolina Sabo
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Valentina Španić
- Department of Small Cereal Crops, Agricultural Institute Osijek, 31000 Osijek, Croatia;
- Correspondence:
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11
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Latini A, Cantale C, Thiyagarajan K, Ammar K, Galeffi P. Expression Analysis of the TdDRF1 Gene in Field-Grown Durum Wheat under Full and Reduced Irrigation. Genes (Basel) 2022; 13:genes13030555. [PMID: 35328108 PMCID: PMC8953156 DOI: 10.3390/genes13030555] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Revised: 03/17/2022] [Accepted: 03/18/2022] [Indexed: 02/04/2023] Open
Abstract
Some of the key genes and regulatory mechanisms controlling drought response in durum wheat have been identified. One of the major challenges for breeders is how to use this knowledge for the achievement of drought stress tolerance. In the present study, we report the expression profiles of the TdDRF1 gene, at consecutive plant growth stages, from different durum wheat genotypes evaluated in two different field environments. The expression of a possible target gene (Wdnh13) of the TdDRF1 gene was also investigated and analogies with the transcript profiles were found. The results of the qRT-PCR highlighted differences in molecular patterns, thus suggesting a genotype dependency of the TdDRF1 gene expression in response to the stress induced. Furthermore, a statistical association between the expression of TdDRF1 transcripts and agronomic traits was also performed and significant differences were found among genotypes, suggesting a relationship. One of the genotypes was found to combine molecular and agronomic characteristics.
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Affiliation(s)
- Arianna Latini
- Italian National Agency for New Technologies, Energy and Sustainable Economic Development, ENEA, Casaccia Research Center, 00123 Rome, Italy; (A.L.); (C.C.); (K.T.)
| | - Cristina Cantale
- Italian National Agency for New Technologies, Energy and Sustainable Economic Development, ENEA, Casaccia Research Center, 00123 Rome, Italy; (A.L.); (C.C.); (K.T.)
| | - Karthikeyan Thiyagarajan
- Italian National Agency for New Technologies, Energy and Sustainable Economic Development, ENEA, Casaccia Research Center, 00123 Rome, Italy; (A.L.); (C.C.); (K.T.)
| | - Karim Ammar
- International Maize and Wheat Improvement Centre(CIMMYT), Texcoco 56237, Mexico;
| | - Patrizia Galeffi
- Italian National Agency for New Technologies, Energy and Sustainable Economic Development, ENEA, Casaccia Research Center, 00123 Rome, Italy; (A.L.); (C.C.); (K.T.)
- Correspondence:
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12
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Islam MJ, Uddin MJ, Hossain MA, Henry R, Begum MK, Sohel MAT, Mou MA, Ahn J, Cheong EJ, Lim YS. Exogenous putrescine attenuates the negative impact of drought stress by modulating physio-biochemical traits and gene expression in sugar beet (Beta vulgaris L.). PLoS One 2022; 17:e0262099. [PMID: 34995297 PMCID: PMC8741020 DOI: 10.1371/journal.pone.0262099] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Accepted: 12/17/2021] [Indexed: 11/19/2022] Open
Abstract
Drought tolerance is a complex trait controlled by many metabolic pathways and genes and identifying a solution to increase the resilience of plants to drought stress is one of the grand challenges in plant biology. This study provided compelling evidence of increased drought stress tolerance in two sugar beet genotypes when treated with exogenous putrescine (Put) at the seedling stage. Morpho-physiological and biochemical traits and gene expression were assessed in thirty-day-old sugar beet seedlings subjected to drought stress with or without Put (0.3, 0.6, and 0.9 mM) application. Sugar beet plants exposed to drought stress exhibited a significant decline in growth and development as evidenced by root and shoot growth characteristics, photosynthetic pigments, antioxidant enzyme activities, and gene expression. Drought stress resulted in a sharp increase in hydrogen peroxide (H2O2) (89.4 and 118% in SBT-010 and BSRI Sugar beet 2, respectively) and malondialdehyde (MDA) (35.6 and 27.1% in SBT-010 and BSRI Sugar beet 2, respectively). These changes were strongly linked to growth retardation as evidenced by principal component analysis (PCA) and heatmap clustering. Importantly, Put-sprayed plants suffered from less oxidative stress as indicated by lower H2O2 and MDA accumulation. They better regulated the physiological processes supporting growth, dry matter accumulation, photosynthetic pigmentation and gas exchange, relative water content; modulated biochemical changes including proline, total soluble carbohydrate, total soluble sugar, and ascorbic acid; and enhanced the activities of antioxidant enzymes and gene expression. PCA results strongly suggested that Put conferred drought tolerance mostly by enhancing antioxidant enzymes activities that regulated homeostasis of reactive oxygen species. These findings collectively provide an important illustration of the use of Put in modulating drought tolerance in sugar beet plants.
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Affiliation(s)
- Md Jahirul Islam
- Department of Bio-Health Convergence, College of Biomedical Science, Kangwon National University, Chuncheon, Republic of Korea
- Physiology and Sugar Chemistry Division, Bangladesh Sugarcrop Research institute, Ishurdi, Pabna, Bangladesh
| | - Md Jalal Uddin
- Department of Medical Biomaterials Engineering, College of Biomedical Science, Kangwon National University, Chuncheon, Republic of Korea
- Research Group for Host-Microbe Interactions, Department of Medical Biology and Centre for New Antibacterial Strategies (CANS), UiT—The Arctic University of Norway, Tromsø, Norway
| | - Mohammad Anwar Hossain
- Department of Genetics and Plant Breeding, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Robert Henry
- Queensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Qld, Australia
| | - Mst. Kohinoor Begum
- Physiology and Sugar Chemistry Division, Bangladesh Sugarcrop Research institute, Ishurdi, Pabna, Bangladesh
| | - Md. Abu Taher Sohel
- Agronomy and Farming System Division, Bangladesh Sugarcrop Research Institute, Ishurdi, Pabna, Bangladesh
| | - Masuma Akter Mou
- Department of Agronomy, Bangladesh Agricultural University, Mymensingh, Bangladesh
| | - Juhee Ahn
- Department of Medical Biomaterials Engineering, College of Biomedical Science, Kangwon National University, Chuncheon, Republic of Korea
| | - Eun Ju Cheong
- Division of Forest Science, College of Forest and Environmental Sciences, Kangwon National University, Chuncheon, Korea
| | - Young-Seok Lim
- Department of Bio-Health Convergence, College of Biomedical Science, Kangwon National University, Chuncheon, Republic of Korea
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Chaudhry S, Sidhu GPS. Climate change regulated abiotic stress mechanisms in plants: a comprehensive review. PLANT CELL REPORTS 2022; 41:1-31. [PMID: 34351488 DOI: 10.1007/s00299-021-02759-5] [Citation(s) in RCA: 115] [Impact Index Per Article: 57.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Accepted: 07/18/2021] [Indexed: 05/20/2023]
Abstract
Global climate change is identified as a major threat to survival of natural ecosystems. Climate change is a dynamic, multifaceted system of alterations in environmental conditions that affect abiotic and biotic components of the world. It results in alteration in environmental conditions such as heat waves, intensity of rainfall, CO2 concentration and temperature that lead to rise in new pests, weeds and pathogens. Climate change is one of the major constraints limiting plant growth and development worldwide. It impairs growth, disturbs photosynthesis, and reduces physiological responses in plants. The variations in global climate have gained the attention of researchers worldwide, as these changes negatively affect the agriculture by reducing crop productivity and food security. With this background, this review focuses on the effects of elevated atmospheric CO2 concentration, temperature, drought and salinity on the morphology, physiology and biochemistry of plants. Furthermore, this paper outlines an overview on the reactive oxygen species (ROS) production and their impact on the biochemical and molecular status of plants with increased climatic variations. Also additionally, different tolerance strategies adopted by plants to combat environmental adversities have been discussed.
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Affiliation(s)
- Smita Chaudhry
- Institute of Environmental Studies, Kurukshetra University, Kurukshetra, Haryana, 136119, India
- Centre for Applied Biology in Environment Sciences, Kurukshetra University, Kurukshetra, Haryana, 136119, India
| | - Gagan Preet Singh Sidhu
- Centre for Applied Biology in Environment Sciences, Kurukshetra University, Kurukshetra, Haryana, 136119, India.
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14
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Aazami MA, Rasouli F, Ebrahimzadeh A. Oxidative damage, antioxidant mechanism and gene expression in tomato responding to salinity stress under in vitro conditions and application of iron and zinc oxide nanoparticles on callus induction and plant regeneration. BMC PLANT BIOLOGY 2021; 21:597. [PMID: 34915853 PMCID: PMC8675469 DOI: 10.1186/s12870-021-03379-7] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 12/03/2021] [Indexed: 05/10/2023]
Abstract
BACKGROUND Salinity is one of the most challenging abiotic stresses restricting the growth of plants. In vitro screening will increase the efficiency and speed of salinity tolerant genotypes identifications. The response of four tomato cultivars under salinity was analyzed in vitro to evaluate the seedlings growth, biochemical, and gene expression responses as well as the effect of nano zinc and iron on callus induction and plant regeneration. RESULTS The results showed that an increase in salinity stress in the medium decreased the germination percentage, fresh and dry weight of shoot, root length, chlorophyll a, b and carotenoids content, K and Ca content, and on the other hand, Na content was increased. MDA content ('Nora', 'PS-10', 'Peto' and 'Roma': 1.71, 1.78, 1.66 and 2.16 folds, respectively), electrolyte leakage ('PS-10': 33.33%; 'Roma': 56.33%), were increased with salinity of 100 mM compared to control. Proline content was increased in 50 mM NaCl (10.8 fold). The most activity of antioxidant enzymes including CAT, SOD, APX, GPX, and GR was observed in the 'PS-10' cultivar, and the lowest activity of these enzymes was observed in 'Roma' under salinity stress. The AsA and GSH were decreased and DHA and GSSG were increased with the increased intensity of salinity. The relative expression of SOD, APX, and GR genes varied in different cultivars at different salinity concentrations. The most percentage of callus induction was observed with applying iron oxide nanoparticles, and the most regeneration rate was recorded using zinc oxide nanoparticles. CONCLUSION The results showed that salt-tolerant cultivars such as 'PS-10' with better osmotic adjustment, are suitable candidates for the future production and breeding programs. The use of nutrient nanoparticles under salinity stress for different tomato cultivars increased their performance.
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Affiliation(s)
- Mohammad Ali Aazami
- Department of Horticulture, Faculty of Agriculture, University of Maragheh, Maragheh, Iran.
| | - Farzad Rasouli
- Department of Horticulture, Faculty of Agriculture, University of Maragheh, Maragheh, Iran
| | - Asghar Ebrahimzadeh
- Department of Horticulture, Faculty of Agriculture, University of Maragheh, Maragheh, Iran
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15
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Abdul Aziz M, Sabeem M, Mullath SK, Brini F, Masmoudi K. Plant Group II LEA Proteins: Intrinsically Disordered Structure for Multiple Functions in Response to Environmental Stresses. Biomolecules 2021; 11:1662. [PMID: 34827660 PMCID: PMC8615533 DOI: 10.3390/biom11111662] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 11/01/2021] [Accepted: 11/04/2021] [Indexed: 11/16/2022] Open
Abstract
In response to various environmental stresses, plants have evolved a wide range of defense mechanisms, resulting in the overexpression of a series of stress-responsive genes. Among them, there is certain set of genes that encode for intrinsically disordered proteins (IDPs) that repair and protect the plants from damage caused by environmental stresses. Group II LEA (late embryogenesis abundant) proteins compose the most abundant and characterized group of IDPs; they accumulate in the late stages of seed development and are expressed in response to dehydration, salinity, low temperature, or abscisic acid (ABA) treatment. The physiological and biochemical characterization of group II LEA proteins has been carried out in a number of investigations because of their vital roles in protecting the integrity of biomolecules by preventing the crystallization of cellular components prior to multiple stresses. This review describes the distribution, structural architecture, and genomic diversification of group II LEA proteins, with some recent investigations on their regulation and molecular expression under various abiotic stresses. Novel aspects of group II LEA proteins in Phoenix dactylifera and in orthodox seeds are also presented. Genome-wide association studies (GWAS) indicated a ubiquitous distribution and expression of group II LEA genes in different plant cells. In vitro experimental evidence from biochemical assays has suggested that group II LEA proteins perform heterogenous functions in response to extreme stresses. Various investigations have indicated the participation of group II LEA proteins in the plant stress tolerance mechanism, spotlighting the molecular aspects of group II LEA genes and their potential role in biotechnological strategies to increase plants' survival in adverse environments.
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Affiliation(s)
- Mughair Abdul Aziz
- Integrative Agriculture Department, College of Agriculture and Veterinary Medicine, United Arab Emirates University, Al Ain 15551, United Arab Emirates; (M.A.A.); (M.S.)
| | - Miloofer Sabeem
- Integrative Agriculture Department, College of Agriculture and Veterinary Medicine, United Arab Emirates University, Al Ain 15551, United Arab Emirates; (M.A.A.); (M.S.)
| | - Sangeeta Kutty Mullath
- Department of Vegetable Science, College of Agriculture, Kerala Agricultural University, Thrissur 680656, India;
| | - Faical Brini
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, B.P 1177, Sfax 3018, Tunisia;
| | - Khaled Masmoudi
- Integrative Agriculture Department, College of Agriculture and Veterinary Medicine, United Arab Emirates University, Al Ain 15551, United Arab Emirates; (M.A.A.); (M.S.)
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16
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Kundrátová K, Bartas M, Pečinka P, Hejna O, Rychlá A, Čurn V, Červeň J. Transcriptomic and Proteomic Analysis of Drought Stress Response in Opium Poppy Plants during the First Week of Germination. PLANTS 2021; 10:plants10091878. [PMID: 34579414 PMCID: PMC8465278 DOI: 10.3390/plants10091878] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Revised: 08/30/2021] [Accepted: 09/08/2021] [Indexed: 11/16/2022]
Abstract
Water deficiency is one of the most significant abiotic stresses that negatively affects growth and reduces crop yields worldwide. Most research is focused on model plants and/or crops which are most agriculturally important. In this research, drought stress was applied to two drought stress contrasting varieties of Papaver somniferum (the opium poppy), a non-model plant species, during the first week of its germination, which differ in responses to drought stress. After sowing, the poppy seedlings were immediately subjected to drought stress for 7 days. We conducted a large-scale transcriptomic and proteomic analysis for drought stress response. At first, we found that the transcriptomic and proteomic profiles significantly differ. However, the most significant findings are the identification of key genes and proteins with significantly different expressions relating to drought stress, e.g., the heat-shock protein family, dehydration responsive element-binding transcription factors, ubiquitin E3 ligase, and others. In addition, metabolic pathway analysis showed that these genes and proteins were part of several biosynthetic pathways most significantly related to photosynthetic processes, and oxidative stress responses. A future study will focus on a detailed analysis of key genes and the development of selection markers for the determination of drought-resistant varieties and the breeding of new resistant lineages.
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Affiliation(s)
- Kristýna Kundrátová
- Department of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, 710 00 Ostrava, Czech Republic; (K.K.); (M.B.); (P.P.)
| | - Martin Bartas
- Department of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, 710 00 Ostrava, Czech Republic; (K.K.); (M.B.); (P.P.)
| | - Petr Pečinka
- Department of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, 710 00 Ostrava, Czech Republic; (K.K.); (M.B.); (P.P.)
| | - Ondřej Hejna
- Department of Genetics and Agricultural Biotechnology, Faculty of Agriculture, University of South Bohemia, Studentská 1668, 370 05 České Budějovice, Czech Republic;
| | - Andrea Rychlá
- Research Institute of Oilseed Crops, OSEVA PRO. Ltd., Purkyňova 10, 764 01 Opava, Czech Republic;
| | - Vladislav Čurn
- Department of Genetics and Agricultural Biotechnology, Faculty of Agriculture, University of South Bohemia, Studentská 1668, 370 05 České Budějovice, Czech Republic;
- Correspondence: (V.Č.); (J.Č.)
| | - Jiří Červeň
- Department of Biology and Ecology, Faculty of Science, University of Ostrava, Chittussiho 10, 710 00 Ostrava, Czech Republic; (K.K.); (M.B.); (P.P.)
- Correspondence: (V.Č.); (J.Č.)
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17
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Bányai J, Maccaferri M, Láng L, Mayer M, Tóth V, Cséplő M, Pál M, Mészáros K, Vida G. Abiotic Stress Response of Near-Isogenic Spring Durum Wheat Lines under Different Sowing Densities. Int J Mol Sci 2021; 22:2053. [PMID: 33669605 PMCID: PMC7923076 DOI: 10.3390/ijms22042053] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Revised: 02/02/2021] [Accepted: 02/07/2021] [Indexed: 11/29/2022] Open
Abstract
A detailed study was made of changes in the plant development, morphology, physiology and yield biology of near-isogenic lines of spring durum wheat sown in the field with different plant densities in two consecutive years (2013-2014). An analysis was made of the drought tolerance of isogenic lines selected for yield QTLs (QYld.idw-2B and QYld.idw-3B), and the presence of QTL effects was examined in spring sowings. Comparisons were made of the traits of the isogenic pairs QYld.idw-3B++ and QYld.idw-3B-- both within and between the pairs. Changes in the polyamine content, antioxidant enzyme activity, chlorophyll content of the flag leaf and the normalized difference vegetation index (NDVI) of the plot were monitored in response to drought stress, and the relationship between these components and the yield was analyzed. In the case of moderate stress, differences between the NIL++ and NIL-- pairs appeared in the early dough stage, indicating that the QYld.idw-3B++ QTL region was able to maintain photosynthetic activity for a longer period, resulting in greater grain number and grain weight at the end of the growing period. The chlorophyll content of the flag leaf in phenophases Z77 and Z83 was significantly correlated with the grain number and grain weight of the main spike. The grain yield was greatly influenced by the treatment, while the genotype had a significant effect on the thousand-kernel weight and on the grain number and grain weight of the main spike. When the lines were compared in the non-irrigated treatment, significantly more grains and significantly higher grain weight were observed in the main spike in NIL++ lines, confirming the theory that the higher yields of the QYld.idw-3B++ lines when sown in spring and exposed to drought stress could be attributed to the positive effect of the "Kofa" QTL on chromosome 3B.
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Affiliation(s)
- Judit Bányai
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Marco Maccaferri
- Department of Agricultural and Food Sciences, University of Bologna, 40126 Bologna, Italy;
| | - László Láng
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Marianna Mayer
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Viola Tóth
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Mónika Cséplő
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Magda Pál
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Klára Mészáros
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
| | - Gyula Vida
- Centre for Agricultural Research, Agricultural Institute, ELKH, 2462 Martonvásár, Hungary; (L.L.); (M.M.); (V.T.); (M.C.); (M.P.); (K.M.); (G.V.)
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18
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Ghosh D, Karmakar P. Insight into anti-oxidative carbohydrate polymers from medicinal plants: Structure-activity relationships, mechanism of actions and interactions with bovine serum albumin. Int J Biol Macromol 2020; 166:1022-1034. [PMID: 33166557 DOI: 10.1016/j.ijbiomac.2020.10.258] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2020] [Revised: 10/29/2020] [Accepted: 10/30/2020] [Indexed: 01/06/2023]
Abstract
Recently, research associated with natural anti-oxidants leads to the chemical characterization of many compounds possessing strong anti-oxidant activity. Among these anti-oxidants, naturally occurring carbohydrate polymers containing pectic arabinogalactans esterified with phenolic acids in monomeric and dimeric forms are noteworthy. The presence of highly branched arabinogalactan type II side chains and sugar linked phenolic acid residues have been resolved as important parameters. The anti-oxidant activity of these compounds depend on their ability to convert free radicals into stable by-products and themselves oxidized to more stable and less reactive resonance stabilized radicals. Moreover, these carbohydrate polymers form water soluble stable complexes with protein. Such findings support their applications in a diversity of fields including food industry and pharmacy. This review highlights experimental evidences supporting that the carbohydrate polymers containing phenolic polysaccharides may become promising drug candidate for the prevention of aging and age related diseases.
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Affiliation(s)
- Debjani Ghosh
- Bhatar Girls' High School, Bhatar, Purba Bardhaman, West Bengal, India.
| | - Parnajyoti Karmakar
- Government General Degree College at Kalna-I, Medgachi, Muragacha, Purba Bardhaman, West Bengal, India
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19
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QTL detection and putative candidate gene prediction for leaf rolling under moisture stress condition in wheat. Sci Rep 2020; 10:18696. [PMID: 33122772 PMCID: PMC7596552 DOI: 10.1038/s41598-020-75703-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Accepted: 10/15/2020] [Indexed: 12/20/2022] Open
Abstract
Leaf rolling is an important mechanism to mitigate the effects of moisture stress in several plant species. In the present study, a set of 92 wheat recombinant inbred lines derived from the cross between NI5439 × HD2012 were used to identify QTLs associated with leaf rolling under moisture stress condition. Linkage map was constructed using Axiom 35 K Breeder’s SNP Array and microsatellite (SSR) markers. A linkage map with 3661 markers comprising 3589 SNP and 72 SSR markers spanning 22,275.01 cM in length across 21 wheat chromosomes was constructed. QTL analysis for leaf rolling trait under moisture stress condition revealed 12 QTLs on chromosomes 1B, 2A, 2B, 2D, 3A, 4A, 4B, 5D, and 6B. A stable QTL Qlr.nhv-5D.2 was identified on 5D chromosome flanked by SNP marker interval AX-94892575–AX-95124447 (5D:338665301–5D:410952987). Genetic and physical map integration in the confidence intervals of Qlr.nhv-5D.2 revealed 14 putative candidate genes for drought tolerance which was narrowed down to six genes based on in-silico analysis. Comparative study of leaf rolling genes in rice viz., NRL1, OsZHD1, Roc5, and OsHB3 on wheat genome revealed five genes on chromosome 5D. Out of the identified genes, TraesCS5D02G253100 falls exactly in the QTL Qlr.nhv-5D.2 interval and showed 96.9% identity with OsZHD1. Two genes similar to OsHB3 viz. TraesCS5D02G052300 and TraesCS5D02G385300 exhibiting 85.6% and 91.8% identity; one gene TraesCS5D02G320600 having 83.9% identity with Roc5 gene; and one gene TraesCS5D02G102600 showing 100% identity with NRL1 gene were also identified, however, these genes are located outside Qlr.nhv-5D.2 interval. Hence, TraesCS5D02G253100 could be the best potential candidate gene for leaf rolling and can be utilized for improving drought tolerance in wheat.
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20
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Carbohydrate Accumulation and Differential Transcript Expression in Winter Wheat Lines with Different Levels of Snow Mold and Freezing Tolerance after Cold Treatment. PLANTS 2020; 9:plants9111416. [PMID: 33113921 PMCID: PMC7690702 DOI: 10.3390/plants9111416] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Revised: 10/12/2020] [Accepted: 10/17/2020] [Indexed: 12/23/2022]
Abstract
Winter wheat (Triticum aestivum L.) undergoes a period of cold acclimation in order to survive the ensuing winter, which can bring freezing temperatures and snow mold infection. Tolerance of these stresses is conferred in part by accumulation of carbohydrates in the crown region. This study investigates the contributions of carbohydrate accumulation during a cold treatment among wheat lines that differ in their snow mold tolerance (SMT) or susceptibility (SMS) and freezing tolerance (FrT) or susceptibility (FrS). Two parent varieties and eight recombinant inbred lines (RILs) were analyzed. The selected RILs represent four combinations of tolerance: SMT/FrT, SMT/FrS, SMS/FrT, and SMS/FrS. It is hypothesized that carbohydrate accumulation and transcript expression will differ between sets of RILs. Liquid chromatography with a refractive index detector was used to quantify carbohydrate content at eight time points over the cold treatment period. Polysaccharide and sucrose content differed between SMT and SMS RILs at various time points, although there were no significant differences in glucose or fructose content. Glucose and fructose content differed between FrT and FrS RILs in this study, but no significant differences in polysaccharide or sucrose content. RNAseq was used to investigate differential transcript expression, followed by modular enrichment analysis, to reveal potential candidates for other mechanisms of tolerance, which included expected pathways such as oxidative stress, chitinase activity, and unexpected transcriptional pathways. These differences in carbohydrate accumulation and differential transcript expression begin to give insight into the differences of wheat lines when exposed to cold temperatures.
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21
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Vijayaraghavareddy P, Vemanna RS, Yin X, Struik PC, Makarla U, Sreeman S. Acquired Traits Contribute More to Drought Tolerance in Wheat Than in Rice. PLANT PHENOMICS (WASHINGTON, D.C.) 2020; 2020:5905371. [PMID: 33313560 PMCID: PMC7706322 DOI: 10.34133/2020/5905371] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Accepted: 05/04/2020] [Indexed: 05/27/2023]
Abstract
Drought tolerance is governed by constitutive and acquired traits. Combining them has relevance for sustaining crop productivity under drought. Mild levels of stress induce specific mechanisms that protect metabolism when stress becomes severe. Here, we report a comparative assessment of "acquired drought tolerance (ADT)" traits in two rice cultivars, IR64 (drought susceptible) and Apo (tolerant), and a drought-tolerant wheat cultivar, Weebill. Young seedlings were exposed to progressive concentrations of methyl viologen (MV), a stress inducer, before transferring to a severe concentration. "Induced" seedlings showed higher tolerance and recovery growth than seedlings exposed directly to severe stress. A novel phenomic platform with an automated irrigation system was used for precisely imposing soil moisture stress to capture ADT traits during the vegetative stage. Gradual progression of drought was achieved through a software-controlled automated irrigation facility. This facility allowed the maintenance of the same level of soil moisture irrespective of differences in transpiration, and hence, this platform provided the most appropriate method to assess ADT traits. Total biomass decreased more in IR64 than in Apo. The wheat cultivar showed lower levels of damage and higher recovery growth even compared to Apo. Expression of ROS-scavenging enzymes and drought-responsive genes was significantly higher in Apo than in IR64, but differences were only marginal between Apo and Weebill. The wheat cultivar showed significantly higher stomatal conductance, carbon gain, and biomass than the rice cultivars, under drought. These differences in ADT traits between cultivars as well as between species can be utilised for improving drought tolerance in crop plants.
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Affiliation(s)
- Preethi Vijayaraghavareddy
- Department of Crop Physiology, University of Agricultural Sciences, Bengaluru, India
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, Netherlands
| | - Ramu S. Vemanna
- Regional Centre for Biotechnology, Faridabad, Haryana, India
| | - Xinyou Yin
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, Netherlands
| | - Paul C. Struik
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, Netherlands
| | - Udayakumar Makarla
- Department of Crop Physiology, University of Agricultural Sciences, Bengaluru, India
| | - Sheshshayee Sreeman
- Department of Crop Physiology, University of Agricultural Sciences, Bengaluru, India
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22
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Yang Y, Dong A, Zenda T, Liu S, Liu X, Wang Y, Li J, Duan H. DIA (Data Independent Acquisition) proteomic based study on maize filling-kernel stage drought stress-responsive proteins and metabolic pathways. BIOTECHNOL BIOTEC EQ 2020. [DOI: 10.1080/13102818.2020.1827981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
Affiliation(s)
- Yatong Yang
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Anyi Dong
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Tinashe Zenda
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Songtao Liu
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Xinyue Liu
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Yafei Wang
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Jiao Li
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
| | - Huijun Duan
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, Hebei, PR China
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, Hebei, PR China
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