1
|
Tang X, Jeewon R, Lu YZ, Alrefaei AF, Jayawardena RS, Xu RJ, Ma J, Chen XM, Kang JC. Morphophylogenetic evidence reveals four new fungal species within Tetraplosphaeriaceae (Pleosporales, Ascomycota) from tropical and subtropical forest in China. MycoKeys 2023; 100:171-204. [PMID: 38098977 PMCID: PMC10719940 DOI: 10.3897/mycokeys.100.113141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 11/09/2023] [Indexed: 12/17/2023] Open
Abstract
Tetraplosphaeriaceae (Pleosporales, Ascomycota) is a family with many saprobes recorded from various hosts, especially bamboo and grasses. During a taxonomic investigation of microfungi in tropical and subtropical forest regions of Guizhou, Hainan and Yunnan provinces, China, several plant samples were collected and examined for fungi. Four newly discovered species are described based on morphology and evolutionary relationships with their allies inferred from phylogenetic analyses derived from a combined dataset of LSU, ITS, SSU, and tub2 DNA sequence data. Detailed illustrations, descriptions and taxonomic notes are provided for each species. The four new species of Tetraplosphaeriaceae reported herein are Polyplosphaeriaguizhouensis, Polyplosphaeriahainanensis, Pseudotetraploayunnanensis, and Tetraploahainanensis. A checklist of Tetraplosphaeriaceae species with available details on their ecology is also provided.
Collapse
Affiliation(s)
- Xia Tang
- Engineering and Research Center for Southwest Biopharmaceutical Resource of National Education Ministry of China, Guizhou University, Guiyang, 550025, Guizhou Province, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Rajesh Jeewon
- School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
- Department of Health Sciences, Faculty of Medicine and Health Sciences, University of Mauritius, Reduit, Mauritius
| | - Yong-Zhong Lu
- Engineering and Research Center for Southwest Biopharmaceutical Resource of National Education Ministry of China, Guizhou University, Guiyang, 550025, Guizhou Province, China
- Department of Zoology, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia
| | - Abdulwahed Fahad Alrefaei
- Department of Health Sciences, Faculty of Medicine and Health Sciences, University of Mauritius, Reduit, Mauritius
| | | | - Rong-Ju Xu
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Jian Ma
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Xue-Mei Chen
- School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang, Guizhou Province550003, China
| | - Ji-Chuan Kang
- Engineering and Research Center for Southwest Biopharmaceutical Resource of National Education Ministry of China, Guizhou University, Guiyang, 550025, Guizhou Province, China
| |
Collapse
|
2
|
Calabon MS, Hyde KD, Jones EBG, Luo ZL, Dong W, Hurdeal VG, Gentekaki E, Rossi W, Leonardi M, Thiyagaraja V, Lestari AS, Shen HW, Bao DF, Boonyuen N, Zeng M. Freshwater fungal numbers. FUNGAL DIVERS 2022. [DOI: 10.1007/s13225-022-00503-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
3
|
Shen HW, Bao DF, Bhat DJ, Su HY, Luo ZL. Lignicolous freshwater fungi in Yunnan Province, China: an overview. Mycology 2022; 13:119-132. [PMID: 35711328 PMCID: PMC9196657 DOI: 10.1080/21501203.2022.2058638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Yunnan Province is one of the rich biodiversity hotspots with abundant resources of lignicolous freshwater fungi. A total of 281 species of lignicolous freshwater fungi from 1986 to the present in Yunnan Province. They are mostly distributed in the classes Dothideomycetes and Sordariomycetes, a few species in the Eurotiomycetes and Leotiomycetes, and rarely reported in Orbiliomycetes and Pezizomycetes. Lignicolous freshwater fungi can decompose lignocellulose substrates and release energy and nutrients, and thus playing an important role in freshwater environment. This study briefly reviewed the biodiversity and taxonomic status of lignicolous freshwater fungi in Yunnan, the ecological functions of lignicolous freshwater fungi, factors affecting community distribution, application status, and research difficulties.
Collapse
Affiliation(s)
- Hong-Wei Shen
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, Thailand
| | - Dan-Feng Bao
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
| | | | - Hong-Yan Su
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
| | - Zong-Long Luo
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
| |
Collapse
|
4
|
New Coelomycetous Fungi from Freshwater in Spain. JOURNAL OF FUNGI (BASEL, SWITZERLAND) 2021; 7:jof7050368. [PMID: 34066856 PMCID: PMC8151841 DOI: 10.3390/jof7050368] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Revised: 04/28/2021] [Accepted: 05/06/2021] [Indexed: 11/20/2022]
Abstract
Coelomycetous fungi are ubiquitous in soil, sewage, and sea- and freshwater environments. However, freshwater coelomycetous fungi have been very rarely reported in the literature. Knowledge of coelomycetous fungi in freshwater habitats in Spain is poor. The incubation of plant debris, from freshwater in various places in Spain into wet chambers, allowed us to detect and isolate in pure culture several pycnidia-producing fungi. Fungal strains were phenotypically characterized, and a phylogenetic study was carried out based on the analysis of concatenated nucleotide sequences of the D1–D2 domains of the 28S nrRNA gene (LSU), the internal transcribed spacer region (ITS) of the nrDNA, and fragments of the RNA polymerase II subunit 2 (rpb2) and beta tubulin (tub2) genes. As a result of these, we report the finding of two novel species of Neocucurbitaria, three of Neopyrenochaeta, and one of Pyrenochaetopsis. Based on the phylogenetic study, we also transferred Neocucurbitaria prunicola to the genus Allocucurbitaria. This work makes an important contribution to the knowledge of the mycobiota of plant debris in freshwater habitats.
Collapse
|
5
|
Luo ZL, Hyde KD, Liu JK(J, Maharachchikumbura SSN, Jeewon R, Bao DF, Bhat DJ, Lin CG, Li WL, Yang J, Liu NG, Lu YZ, Jayawardena RS, Li JF, Su HY. Freshwater Sordariomycetes. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00438-1] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Abstract
Sordariomycetes is one of the largest classes of Ascomycota that comprises a highly diverse range of fungi mainly characterized by perithecial ascomata and inoperculate unitunicate asci. Freshwater Sordariomycetes play an important role in ecosystems and some of them have the potential to produce bioactive compounds. This study documents and reviews the freshwater Sordariomycetes, which is one of the largest and important groups of fungi in aquatic habitats. Based on evidence from DNA sequence data and morphology, we introduce a new order Distoseptisporales, two new families, viz. Ceratosphaeriaceae and Triadelphiaceae, three new genera, viz. Aquafiliformis, Dematiosporium and Neospadicoides, 47 new species, viz. Acrodictys fluminicola, Aquafiliformis lignicola, Aquapteridospora fusiformis, Arthrinium aquaticum, Ascosacculus fusiformis, Atractospora aquatica, Barbatosphaeria lignicola, Ceratosphaeria aquatica, C. lignicola, Chaetosphaeria aquatica, Ch. catenulata, Ch. guttulata, Ch. submersa, Codinaea yunnanensis, Conioscypha aquatica, C. submersa, Cordana aquatica, C. lignicola, Cosmospora aquatica, Cylindrotrichum submersum, Dematiosporium aquaticum, Dictyochaeta cangshanensis, D. ellipsoidea, D. lignicola, D. submersa, Distoseptispora appendiculata, D. lignicola, D. neorostrata, D. obclavata, Hypoxylon lignicola, Lepteutypa aquatica, Myrmecridium aquaticum, Neospadicoides aquatica, N. lignicola, N. yunnanensis, Ophioceras submersum, Peroneutypa lignicola, Phaeoisaria filiformis, Pseudostanjehughesia lignicola, Rhodoveronaea aquatica, Seiridium aquaticum, Sporidesmiella aquatica, Sporidesmium lageniforme, S. lignicola, Tainosphaeria lunata, T. obclavata, Wongia aquatica, two new combinations, viz. Acrodictys aquatica, Cylindrotrichum aquaticum, and 9 new records, viz. Chaetomium globosum, Chaetosphaeria cubensis, Ch. myriocarpa, Cordana abramovii, Co. terrestris, Cuspidatispora xiphiago, Sporidesmiella hyalosperma, Stachybotrys chartarum,S. chlorohalonata. A comprehensive classification of the freshwater Sordariomycetes is presented based on updated literature. Phylogenetic inferences based on DNA sequence analyses of a combined LSU, SSU, RPB2 and TEF1α dataset comprising species of freshwater Sordariomycetes are provided. Detailed information including their habitats distribution, diversity, holotype, specimens collected and classification are provided.
Collapse
|
6
|
Pem D, Hyde KD, Doilom M, Camporesi E, Hongsanan S, Rampadarath S, Bhoyroo V, Jeewon R. Multigene phylogenetic analyses to establish new Valsaria species and taxonomic significance of spore ornamentation. PLoS One 2019; 14:e0217982. [PMID: 31242234 PMCID: PMC6594670 DOI: 10.1371/journal.pone.0217982] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2018] [Accepted: 05/23/2019] [Indexed: 11/18/2022] Open
Abstract
During our studies on fungal diversity from plant substrates, a new species of Valsaria was isolated from dead branches of Ostrya carpinifolia. The taxon is morphologically similar to other taxa in Valsariaceae and is characterized by pseudostromata, apically free pseudoparaphyses, bitunicate asci, and dark brown, 2-celled ascospores. However, it differs from extant species in number of guttules and ornamentation of spore. It is introduced herein as Valsaria ostryae sp. nov. within the family Valsariaceae. Multigene phylogenies based on combined LSU, ITS and RPB2 DNA sequence data generated from maximum likelihood, maximum parsimony and MrBayes analyses indicate that V. ostryae is basal to V. lopadostomoides and V. rudis and its establishment as a new species is strongly supported. No discordance was found between our morphological and phylogenetic species boundaries as postulated by other researchers and our molecular data strongly supports ornamentation of spore as useful for species delineation. Valsaria species do not appear to be host specific. Full morphological details are provided herein and phylogenetic relationships of Valsaria species are also discussed in light with host association.
Collapse
Affiliation(s)
- Dhandevi Pem
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, Yunnan, People’s Republic of China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - Kevin D. Hyde
- Mushroom Research Foundation, 128 M.3 Ban Pa Deng T. Pa Pae, A. Mae Taeng, Chiang Mai, Thailand
- World Agroforestry Centre, East and Central Asia, Kunming, Yunnan, P. R. China
| | - Mingkwan Doilom
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming, Yunnan, People’s Republic of China
- World Agroforestry Centre, East and Central Asia, Kunming, Yunnan, P. R. China
| | - Erio Camporesi
- A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma, Forlì, Italy
- A.M.B. Circolo Micologico “Giovanni Carini”, Brescia, Italy
- Società per gli Studi Naturalistici della Romagna, Bagnacavallo (RA), Italy
| | - Sinang Hongsanan
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
| | | | | | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius
| |
Collapse
|
7
|
Liu F, Bonthond G, Groenewald J, Cai L, Crous P. Sporocadaceae, a family of coelomycetous fungi with appendage-bearing conidia. Stud Mycol 2019; 92:287-415. [PMID: 30584265 PMCID: PMC6298422 DOI: 10.1016/j.simyco.2018.11.001] [Citation(s) in RCA: 68] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Species of Sporocadaceae are endophytic, plant pathogenic or saprobic, and associated with a wide range of host plants. Recent molecular studies that have attempted to address familial and generic boundaries of fungi belonging to Sporocadaceae were based on a limited number of samples and DNA loci. The taxonomy of this group of fungi is therefore still not fully resolved. The aim of the present study is to provide a natural classification for the Sporocadaceae based on multi-locus phylogenetic analyses, using LSU, ITS, tef-1α, tub2 and rpb2 loci, in combination with morphological data. A total of 30 well-supported monophyletic clades in Sporocadaceae are recognised, representing 23 known and seven new genera. Typifications are proposed for the type species of five genera (Diploceras, Discosia, Monochaetia, Sporocadus and Truncatella) to stabilise the application of these names. Furthermore, Neotruncatella and Dyrithiopsis are synonymised under Hymenopleella, and the generic circumscriptions of Diploceras, Disaeta, Hymenopleella, Monochaetia, Morinia, Pseudopestalotiopsis, Sarcostroma, Seimatosporium, Synnemapestaloides and Truncatella are emended. A total of 51 new species, one nomina nova and 15 combinations are introduced.
Collapse
Key Words
- Bartalinia pini F. Liu, L. Cai & Crous
- Discosia rubi F. Liu, L. Cai & Crous
- Discosia tricellularis (Okane et al.) F. Liu, L. Cai & Crous
- Discosia yakushimensis (Kaz. Tanaka et al.) F. Liu, L. Cai & Crous
- Distononappendiculata F. Liu, L. Cai & Crous
- Distononappendiculata banksiae (Crous & Summerell) F. Liu, L. Cai & Crous
- Distononappendiculata casuarinae F. Liu, L. Cai & Crous
- Distononappendiculata verrucata F. Liu, L. Cai & Crous
- Diversimediispora F. Liu, L. Cai & Crous
- Diversimediispora humicola F. Liu, L. Cai & Crous
- Heterotruncatella F. Liu, L. Cai & Crous
- Heterotruncatella acacigena F. Liu, L. Cai & Crous
- Heterotruncatella aspera F. Liu, L. Cai & Crous
- Heterotruncatella avellanea F. Liu, L. Cai & Crous
- Heterotruncatella breviappendiculata F. Liu, L. Cai & Crous
- Heterotruncatella constricta F. Liu, L. Cai & Crous
- Heterotruncatella diversa F. Liu, L. Cai & Crous
- Heterotruncatella grevilleae F. Liu, L. Cai & Crous
- Heterotruncatella longissima F. Liu, L. Cai & Crous
- Heterotruncatella lutea (H.J. Swart & D.A. Griffiths) F. Liu, L. Cai & Crous
- Heterotruncatella proteicola F. Liu, L. Cai & Crous
- Heterotruncatella quercicola F. Liu, L. Cai & Crous
- Heterotruncatella restionacearum (S.J. Lee & Crous) F. Liu, L. Cai & Crous
- Heterotruncatella singularis F. Liu, L. Cai & Crous
- Heterotruncatella spadicea (S.J. Lee & Crous) F. Liu, L. Cai & Crous
- Heterotruncatella spartii (Senan. et al.) F. Liu, L. Cai & Crous
- Heterotruncatella synapheae F. Liu, L. Cai & Crous
- Heterotruncatella vinaceobubalina F. Liu, L. Cai & Crous
- Hymenopleella austroafricana F. Liu, L. Cai & Crous
- Hymenopleella endophytica (Hyang B. Lee et al.) F. Liu, L. Cai & Crous
- Hymenopleella lakefuxianensis (L. Cai et al.) F. Liu, L. Cai & Crous
- Hymenopleella polyseptata F. Liu, L. Cai & Crous
- Hymenopleella subcylindrica F. Liu, L. Cai & Crous
- Monochaetia quercus F. Liu, L. Cai & Crous
- Morinia acaciae (Crous) F. Liu, L. Cai & Crous
- Morinia crini F. Liu, L. Cai & Crous
- Multi-locus phylogeny
- New taxa
- Nonappendiculata F. Liu, L. Cai & Crous
- Nonappendiculata quercina F. Liu, L. Cai & Crous
- Parabartalinia F. Liu, L. Cai & Crous
- Parabartalinia lateralis F. Liu, L. Cai & Crous
- Pestalotia hypericina Ces.
- Pestalotia monochaeta Desmazières
- Pestalotiopsis hispanica F. Liu, L. Cai & Crous
- Pestalotiopsis leucadendri F. Liu, L. Cai & Crous
- Pestalotiopsis spathuliappendiculata F. Liu, L. Cai & Crous
- Pestalotiopsis terricola F. Liu, L. Cai & Crous
- Pseudopestalotiopsis elaeidis (C. Booth & J.S. Robertson) F. Liu, L. Cai & Crous
- Pseudopestalotiopsis solicola F. Liu, L. Cai & Crous
- Pseudosarcostroma F. Liu, L. Cai & Crous
- Pseudosarcostroma osyridicola F. Liu, L. Cai & Crous
- Robillarda australiana F. Liu, L. Cai & Crous
- Sarcostroma africanum F. Liu, L. Cai & Crous
- Sarcostroma australiense F. Liu, L. Cai & Crous
- Sarcostroma diversiseptatum F. Liu, L. Cai & Crous
- Sarcostroma leucospermi F. Liu, L. Cai & Crous
- Sarcostroma longiappendiculatum F. Liu, L. Cai & Crous
- Sarcostroma paragrevilleae F. Liu, L. Cai & Crous
- Sarcostroma proteae F. Liu, L. Cai & Crous
- Seimatosporium
- Seimatosporium germanicum F. Liu, L. Cai & Crous
- Seimatosporium soli F. Liu, L. Cai & Crous
- Seimatosporium vitis-viniferae F. Liu, L. Cai & Crous
- Sphaeria artocreas Tode
- Sporocadus
- Sporocadus biseptatus F. Liu, L. Cai & Crous
- Sporocadus cornicola (Wijayaw. & Camporesi) F. Liu, L. Cai & Crous
- Sporocadus cotini F. Liu, L. Cai & Crous
- Sporocadus incanus F. Liu, L. Cai & Crous
- Sporocadus lichenicola Corda
- Sporocadus mali F. Liu, L. Cai & Crous
- Sporocadus microcyclus F. Liu, L. Cai & Crous
- Sporocadus multiseptatus F. Liu, L. Cai & Crous
- Sporocadus rosarum (Henn.) F. Liu, L. Cai & Crous
- Sporocadus rosigena F. Liu, L. Cai & Crous
- Sporocadus rotundatus F. Liu, L. Cai & Crous
- Sporocadus sorbi (Wijayaw. et al.) F. Liu, L. Cai & Crous
- Sporocadus trimorphus F. Liu, L. Cai & Crous
- Stilbospora angustata Pers
- Synnemapestaloides juniperi F. Liu, L. Cai & Crous
- Taxonomy
- Truncatella spadicea S. Lee & Crous
- Xenoseimatosporium F. Liu, L. Cai & Crous
- Xenoseimatosporium quercinum (Goonas. et al.) F. Liu, L. Cai & Crous
Collapse
Affiliation(s)
- F. Liu
- State key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - G. Bonthond
- Westerdijk Fungal Biodiversity Institute, Utrecht, 3508 AD, The Netherlands
- Benthic Ecology, GEOMAR Helmholtz Centre for Ocean Research Kiel, Hohenbergstraße 2, 24105, Kiel, Germany
| | - J.Z. Groenewald
- Westerdijk Fungal Biodiversity Institute, Utrecht, 3508 AD, The Netherlands
| | - L. Cai
- State key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - P.W. Crous
- Westerdijk Fungal Biodiversity Institute, Utrecht, 3508 AD, The Netherlands
- WUR, Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands
| |
Collapse
|
8
|
Xiao YP, Wen TC, Hongsanan S, Jeewon R, Luangsa-Ard JJ, Brooks S, Wanasinghe DN, Long FY, Hyde KD. Multigene phylogenetics of Polycephalomyces (Ophiocordycipitaceae, Hypocreales), with two new species from Thailand. Sci Rep 2018; 8:18087. [PMID: 30591711 PMCID: PMC6308235 DOI: 10.1038/s41598-018-36792-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2018] [Accepted: 11/08/2018] [Indexed: 11/25/2022] Open
Abstract
Polycephalomyces (Ophiocordycipitaceae) species are found in subtropical regions and are parasitic or hyperparasitic on insects. Two new species, P. aurantiacus and P. marginaliradians, parasitic on Ophiocordyceps barnesii and larva of Cossidae respectively, are introduced in this paper. Morphological comparison with extant species and DNA based phylogenies from analyses of a multigene dataset support the establishment of the new taxa. Polycephalomyces aurantiacus, exhibiting a hyperparasitic lifestyle on Ophiocordyceps barnesii, differs from other species in producing orange conidia in mass and have longer β-phialides in culture. Polycephalomyces marginaliradians differs from other Ophiocordyceps species by producing single stromata with a stipe, smaller perithecia and branched α-phialides and catenate α-conidia and is parasitic on Cossidae. A combined nrSSU, nrLSU, ITS, tef-1a, rpb1 and rpb2 sequence data was analysed phylogenetically including Ophiocordyceps and Polycephalomyces taxa. The new species described herein are clearly distinct from other species in Polycephalomyces. We provide a key to the species of Polycephalomyces and discuss relevant interspecies relationships.
Collapse
Affiliation(s)
- Yuan-Pin Xiao
- Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou Province, 550025, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Ting-Chi Wen
- Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou Province, 550025, China.
| | - Sinang Hongsanan
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, 80837, Mauritius
| | - J Jennifer Luangsa-Ard
- Microbe Interaction and Ecology Laboratory, BIOTEC, NSTDA, 113 Thailand Science Park, Pathum Thani, 12120, Thailand
| | - Siraprapa Brooks
- School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Dhanushka Nadeeshan Wanasinghe
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| | - Feng-Yao Long
- Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang, Guizhou Province, 550025, China
| | - Kevin D Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand
| |
Collapse
|
9
|
Huang SK, Jeewon R, Hyde KD, Bhat DJ, Putarak Chomnunti, Wen TC. Beta-tubulin and Actin gene phylogeny supports Phaeoacremoniumovale as a new species from freshwater habitats in China. MycoKeys 2018; 41:1-15. [PMID: 30344440 PMCID: PMC6194140 DOI: 10.3897/mycokeys.41.27536] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2018] [Accepted: 09/10/2018] [Indexed: 11/25/2022] Open
Abstract
A new species of Phaeoacremonium, P.ovale (Togniniaceae), was isolated during a diversity study of freshwater fungi from Yunnan Province in China. Morphological and cultural studies of the fungus were carried out and its sexual and asexual morphs (holomorph) are introduced herein. This species is characterised by peculiar long-necked, semi-immersed ascomata with oval to ellipsoid ascospores and ellipsoid to ovoid conidia. Phylogenetic analyses of a combined TUB and ACT gene dataset revealed that strains of P.ovale constitute a strongly supported independent lineage and are related to P.griseo-olivaceum and P.africanum. The number of nucleotide differences, across the genes analysed, also supports establishment of P.ovale as a new species.
Collapse
Affiliation(s)
- Shi-Ke Huang
- Engineering and Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang 550025, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
- Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, Yunnan, China
- School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - D. Jayarama Bhat
- Azad Housing Society, No. 128/1-J, Curca, P.O. Goa Velha 403108, India
- Formerly, Department of Botany, Goa University, Goa, 403206, India
| | - Putarak Chomnunti
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand
- School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Ting-Chi Wen
- Engineering and Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang 550025, China
| |
Collapse
|
10
|
|
11
|
Hongsanan S, Jeewon R, Purahong W, Xie N, Liu JK, Jayawardena RS, Ekanayaka AH, Dissanayake A, Raspé O, Hyde KD, Stadler M, Peršoh D. Can we use environmental DNA as holotypes? FUNGAL DIVERS 2018. [DOI: 10.1007/s13225-018-0404-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
|
12
|
Luo ZL, Hyde KD, Bhat DJ, Jeewon R, Maharachchikumbura SSN, Bao DF, Li WL, Su XJ, Yang XY, Su HY. Morphological and molecular taxonomy of novel species Pleurotheciaceae from freshwater habitats in Yunnan, China. Mycol Prog 2018. [DOI: 10.1007/s11557-018-1377-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
13
|
Réblová M, Miller AN, Rossman AY, Seifert KA, Crous PW, Hawksworth DL, Abdel-Wahab MA, Cannon PF, Daranagama DA, De Beer ZW, Huang SK, Hyde KD, Jayawardena R, Jaklitsch W, Jones EBG, Ju YM, Judith C, Maharachchikumbura SSN, Pang KL, Petrini LE, Raja HA, Romero AI, Shearer C, Senanayake IC, Voglmayr H, Weir BS, Wijayawarden NN. Recommendations for competing sexual-asexually typified generic names in Sordariomycetes (except Diaporthales, Hypocreales, and Magnaporthales). IMA Fungus 2016; 7:131-53. [PMID: 27433444 PMCID: PMC4941682 DOI: 10.5598/imafungus.2016.07.01.08] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 05/24/2016] [Indexed: 11/29/2022] Open
Abstract
With the advance to one scientific name for each fungal species, the generic names in the class Sordariomycetes typified by sexual and asexual morphs are evaluated based on their type species to determine if they compete with each other for use or protection. Recommendations are made for which of the competing generic names should be used based on criteria such as priority, number of potential names changes, and frequency of use. Some recommendations for well-known genera include Arthrinium over Apiospora, Colletotrichum over Glomerella, Menispora over Zignoëlla, Microdochium over Monographella, Nigrospora over Khuskia, and Plectosphaerella over Plectosporium. All competing generic names are listed in a table of recommended names along with the required action. If priority is not accorded to sexually typified generic names after 2017, only four names would require formal protection: Chaetosphaerella over Oedemium, Diatrype over Libertella, Microdochium over Monographella, and Phaeoacremonium over Romellia and Togninia. Concerning species in the recommended genera, one replacement name (Xylaria benjaminii nom. nov.) is introduced, and the following new combinations are made: Arthrinium sinense, Chloridium caesium, C. chloroconium, C. gonytrichii, Corollospora marina, C. parvula, C. ramulosa, Juncigena fruticosae, Melanospora simplex, Seimatosporium massarina, Sporoschisma daemonoropis, S. taitense, Torpedospora mangrovei, Xylaria penicilliopsis, and X. termiticola combs. nov.
Collapse
Affiliation(s)
- Martina Réblová
- Department of Taxonomy, Institute of Botany of the Academy of Sciences of the Czech Republic, Prùhonice 252 43, Czech Republic
| | - Andrew N. Miller
- Illinois Natural History Survey, University of Illinois, Champaign, Illinois 61820, USA
| | - Amy Y. Rossman
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331, USA
| | - Keith A. Seifert
- Ottawa Research and Development Centre, Biodiversity (Mycology and Microbiology), Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario K1A 0C6 Canada
| | - Pedro W. Crous
- CBS-KNAW Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - David L. Hawksworth
- Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense, Plaza de Ramón y Cajal s/n, Madrid 28040, Spain
- Department of Life Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK
- Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, Surrey, TW9 3DS, UK
| | - Mohamed A. Abdel-Wahab
- Department of Botany and Microbiology, Faculty of Science, Sohag University, Sohag 82524, Egypt
| | - Paul F. Cannon
- Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, Surrey, TW9 3DS, UK
| | - Dinushani A. Daranagama
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Z. Wilhelm De Beer
- Department of Microbiology and Plant Pathology, University of Pretoria, Pretoria 0002, South Africa
| | - Shi-Ke Huang
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Ruvvishika Jayawardena
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Walter Jaklitsch
- Institute of Forest Entomology, Forest Pathology and Forest Protection, Department of Forest and Soil Sciences, BOKU-University of Natural Resources and Life Sciences, Vienna, Austria
- Division of Systematic and Evolutionary Botany, Department of Botany and Biodiversity Research, University of Vienna, Vienna, Austria
| | - E. B. Gareth Jones
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh 11451, Saudi Arabia
| | - Yu-Ming Ju
- Institute of Plant and Microbial Biology, Academia Sinica, Nankang, Taipei 115 29, Taiwan
| | - Caroline Judith
- Department of Mycology, Institute of Ecology, Evolution and Diversity, Goethe-University, Max-von-Laue-Str. 13, 60438 Frankfurt am Main, Germany
| | - Sajeewa S. N. Maharachchikumbura
- Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, PO Box 8, 123 Al Khoud, Oman
| | - Ka-Lai Pang
- Institute of Marine Biology and Centre of Excellence for the Oceans, National Taiwan Ocean University, 2 Pei-Ning Road, Keelung 20224, Taiwan (ROC)
| | | | - Huzefa A. Raja
- Department of Chemistry and Biochemistry, 457 Sullivan Science Building, University of North Carolina, Greensboro, NC 27402-6170, USA
| | - Andrea I Romero
- Instituto de Micología y Botánica, UBA-CONICET, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, Piso 4°, Lab 6, Av. Int. Güiraldes 2620. Ciudad Universitaria, C1428EHA, Buenos Aires, Argentina
| | - Carol Shearer
- Illinois Natural History Survey, University of Illinois, Champaign, Illinois 61820, USA
| | - Indunil C. Senanayake
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Hermann Voglmayr
- Division of Systematic and Evolutionary Botany, Department of Botany and Biodiversity Research, University of Vienna, Vienna, Austria
| | - Bevan S. Weir
- Manaaki Whenua Landcare Research, Private Bag 92170, Auckland, New Zealand
| | - Nalin N. Wijayawarden
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| |
Collapse
|