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Coleine C, Stajich JE, de Los Ríos A, Selbmann L. Beyond the extremes: Rocks as ultimate refuge for fungi in drylands. Mycologia 2020; 113:108-133. [PMID: 33232202 DOI: 10.1080/00275514.2020.1816761] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
In an era of rapid climate change and expansion of desertification, the extremely harsh conditions of drylands are a true challenge for microbial life. Under drought conditions, where most life forms cannot survive, rocks represent the main refuge for life. Indeed, the endolithic habitat provides thermal buffering, physical stability, and protection against incident ultraviolet (UV) radiation and solar radiation and, to some extent, ensures water retention to microorganisms. The study of these highly specialized extreme-tolerant and extremophiles may provide tools for understanding microbial interactions and processes that allow them to keep their metabolic machinery active under conditions of dryness and oligotrophy that are typically incompatible with active life, up to the dry limits for life. Despite lithobiontic communities being studied all over the world, a comprehensive understanding of their ecology, evolution, and adaptation is still nascent. Herein, we survey the fungal component of these microbial ecosystems. We first provide an overview of the main defined groups (i.e., lichen-forming fungi, black fungi, and yeasts) of the most known and studied Antarctic endolithic communities that are almost the only life forms ensuring ecosystem functionality in the ice-free areas of the continent. For each group, we discuss their main traits and their diversity. Then, we focus on the fungal taxonomy and ecology of other worldwide endolithic communities. Finally, we highlight the utmost importance of a global rock survey in order to have a comprehensive view of the diversity, distribution, and functionality of these fungi in drylands, to obtain tools in desert area management, and as early alarm systems to climate change.
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Affiliation(s)
- Claudia Coleine
- Department of Ecological and Biological Sciences, University of Tuscia , Largo dell'Università snc, 01100, Viterbo, Italy
| | - Jason E Stajich
- Department of Microbiology and Plant Pathology, University of California, 900 University Ave , Riverside, California 92521
| | - Asunción de Los Ríos
- Department of Biogeochemistry and Microbial Ecology, Museo Nacional de Ciencias Naturales, Spanish National Resource Council, Madrid, Spain
| | - Laura Selbmann
- Department of Ecological and Biological Sciences, University of Tuscia , Largo dell'Università snc, 01100, Viterbo, Italy.,Italian National Antarctic Museum, Mycological Section, Genoa, Italy
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Valencia-Islas NA, Arguello JJ, Rojas JL. Antioxidant and Photoprotective Metabolites of Bunodophoron melanocarpum, A Lichen from the Andean Páramo. PHARMACEUTICAL SCIENCES 2020. [DOI: 10.34172/ps.2020.83] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
Background: Oxidative stress caused by exposure to ultraviolet radiation has been associated with dermal problems, including skin cancer. In this study, we determined the photoprotective and antioxidant activity of isolated metabolites from the lichen Bunodophoron melanocarpum (Sphaerophoraceae) to find new sunscreens prototypes. Methods: The constituents of B. melanocarpum were isolated by phytochemical methods and their structures were determined by spectroscopy (IR, 1D and 2D NMR). Antioxidant activity was measured by scavenging DPPH free radicals (EC50), ferric reducing power (FRP), and inhibition of lipid peroxidation (% ILP). The photoprotective capacity against ultraviolet(UVA and UVB) radiations was determined in vitro by calculating their sun protection factor(SPF), critical wavelength and UVA ratio and these values were compared against commercial sunscreens. The lipophilicity and possible skin penetration to the lipid-rich stratum corneum of the isolates, was determined by calculating their octanol/water partition coefficients (Log P) and Gibbs free energy of transfer (ΔtG0 ). Results: Sphaerophorin (1), everninic acid (2), sphaerophorol carboxylic acid (3) and friedelin(4) were isolated from B. melanocarpum. Orsellinic acid-type compounds 1 and 3 are dual agents with antioxidant capacity as free radical scavengers (EC50= 0.0857 and 0.1828 mol compound /mol DPPH•, respectively) and photoprotective properties particularly against UVB radiation(SPF 25.78 ± 0.53 and 22.00 ± 1.03, respectively). In addition, they had lipophilicity (Log P 7.07 ±0.64 and 4.03 ± 0.32, respectively) and ΔtG0 (-40.32 ± 3.67 and -22.97 ± 1.82 kJmol-1, respectively)suitable to act on the skin. Conclusion: Sphaerophorin (1) and sphaerophorol carboxylic acid (3) are dual agents with antioxidant and UVB photoprotective properties and are also lipophilic substances that spontaneously would diffuse across the skin.
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Affiliation(s)
- Norma Angélica Valencia-Islas
- Grupo de Investigación en Química Medicinal, Departamento de Farmacia, Facultad de Ciencias, Universidad Nacional de Colombia, Cra. 30 No. 45-03, Bogotá, Colombia
- Grupo de Investigación en Estudios Biológicos y Fisicoquímicos de Líquenes Colombianos, Departamento de Química, Facultad de Ciencias, Universidad Nacional de Colombia, Cra. 30 No. 45-03, Bogotá, Colombia
| | - Juan J. Arguello
- Grupo de Investigación en Estudios Biológicos y Fisicoquímicos de Líquenes Colombianos, Departamento de Química, Facultad de Ciencias, Universidad Nacional de Colombia, Cra. 30 No. 45-03, Bogotá, Colombia
| | - José L. Rojas
- Grupo de Investigación en Química Medicinal, Departamento de Farmacia, Facultad de Ciencias, Universidad Nacional de Colombia, Cra. 30 No. 45-03, Bogotá, Colombia
- Grupo de Investigación en Estudios Biológicos y Fisicoquímicos de Líquenes Colombianos, Departamento de Química, Facultad de Ciencias, Universidad Nacional de Colombia, Cra. 30 No. 45-03, Bogotá, Colombia
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de Vera JP, Alawi M, Backhaus T, Baqué M, Billi D, Böttger U, Berger T, Bohmeier M, Cockell C, Demets R, de la Torre Noetzel R, Edwards H, Elsaesser A, Fagliarone C, Fiedler A, Foing B, Foucher F, Fritz J, Hanke F, Herzog T, Horneck G, Hübers HW, Huwe B, Joshi J, Kozyrovska N, Kruchten M, Lasch P, Lee N, Leuko S, Leya T, Lorek A, Martínez-Frías J, Meessen J, Moritz S, Moeller R, Olsson-Francis K, Onofri S, Ott S, Pacelli C, Podolich O, Rabbow E, Reitz G, Rettberg P, Reva O, Rothschild L, Sancho LG, Schulze-Makuch D, Selbmann L, Serrano P, Szewzyk U, Verseux C, Wadsworth J, Wagner D, Westall F, Wolter D, Zucconi L. Limits of Life and the Habitability of Mars: The ESA Space Experiment BIOMEX on the ISS. ASTROBIOLOGY 2019; 19:145-157. [PMID: 30742496 PMCID: PMC6383581 DOI: 10.1089/ast.2018.1897] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2018] [Accepted: 01/07/2019] [Indexed: 06/01/2023]
Abstract
BIOMEX (BIOlogy and Mars EXperiment) is an ESA/Roscosmos space exposure experiment housed within the exposure facility EXPOSE-R2 outside the Zvezda module on the International Space Station (ISS). The design of the multiuser facility supports-among others-the BIOMEX investigations into the stability and level of degradation of space-exposed biosignatures such as pigments, secondary metabolites, and cell surfaces in contact with a terrestrial and Mars analog mineral environment. In parallel, analysis on the viability of the investigated organisms has provided relevant data for evaluation of the habitability of Mars, for the limits of life, and for the likelihood of an interplanetary transfer of life (theory of lithopanspermia). In this project, lichens, archaea, bacteria, cyanobacteria, snow/permafrost algae, meristematic black fungi, and bryophytes from alpine and polar habitats were embedded, grown, and cultured on a mixture of martian and lunar regolith analogs or other terrestrial minerals. The organisms and regolith analogs and terrestrial mineral mixtures were then exposed to space and to simulated Mars-like conditions by way of the EXPOSE-R2 facility. In this special issue, we present the first set of data obtained in reference to our investigation into the habitability of Mars and limits of life. This project was initiated and implemented by the BIOMEX group, an international and interdisciplinary consortium of 30 institutes in 12 countries on 3 continents. Preflight tests for sample selection, results from ground-based simulation experiments, and the space experiments themselves are presented and include a complete overview of the scientific processes required for this space experiment and postflight analysis. The presented BIOMEX concept could be scaled up to future exposure experiments on the Moon and will serve as a pretest in low Earth orbit.
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Affiliation(s)
- Jean-Pierre de Vera
- German Aerospace Center (DLR), Institute of Planetary Research, Management and Infrastructure, Research Group Astrobiological Laboratories, Berlin, Germany
| | - Mashal Alawi
- GFZ, German Research Centre for Geosciences, Helmholtz Centre Potsdam, Section 5.3 Geomicrobiology, Telegrafenberg, Potsdam, Germany
| | - Theresa Backhaus
- Institut für Botanik, Heinrich-Heine-Universität (HHU), Düsseldorf, Germany
| | - Mickael Baqué
- German Aerospace Center (DLR), Institute of Planetary Research, Management and Infrastructure, Research Group Astrobiological Laboratories, Berlin, Germany
| | - Daniela Billi
- University of Rome Tor Vergata, Department of Biology, Rome, Italy
| | - Ute Böttger
- German Aerospace Center (DLR), Institute for Optical Sensor Systems, Berlin, Germany
| | - Thomas Berger
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Maria Bohmeier
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Charles Cockell
- School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK
| | - René Demets
- European Space Research and Technology Centre (ESTEC), European Space Agency (ESA), Noordwijk, the Netherlands
| | - Rosa de la Torre Noetzel
- Departamento de Observación de la Tierra, Instituto Nacional de Técnica Aeroespacial (INTA), Madrid, Spain
| | - Howell Edwards
- Raman Spectroscopy Group, University Analytical Centre, Division of Chemical and Forensic Sciences, University of Bradford, West Yorkshire, UK
| | - Andreas Elsaesser
- Institut für experimentelle Physik, Experimentelle Molekulare Biophysik, Frei Universität Berlin, Berlin, Germany
| | | | - Annelie Fiedler
- University of Potsdam, Biodiversity Research/Systematic Botany, Potsdam, Germany
| | - Bernard Foing
- European Space Research and Technology Centre (ESTEC), European Space Agency (ESA), Noordwijk, the Netherlands
| | - Frédéric Foucher
- CNRS, Centre de Biophysique Moléculaire, UPR 4301, Orléans, France
| | - Jörg Fritz
- Museum für Naturkunde - Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany
| | - Franziska Hanke
- German Aerospace Center (DLR), Institute for Optical Sensor Systems, Berlin, Germany
| | - Thomas Herzog
- TH Wildau (Technical University of Applied Sciences), Wildau, Germany
| | - Gerda Horneck
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Heinz-Wilhelm Hübers
- German Aerospace Center (DLR), Institute for Optical Sensor Systems, Berlin, Germany
| | - Björn Huwe
- University of Potsdam, Biodiversity Research/Systematic Botany, Potsdam, Germany
| | - Jasmin Joshi
- University of Potsdam, Biodiversity Research/Systematic Botany, Potsdam, Germany
- Hochschule für Technik HSR Rapperswil, Institute for Landscape and Open Space, Rapperswil, Switzerland
| | | | - Martha Kruchten
- Institut für Botanik, Heinrich-Heine-Universität (HHU), Düsseldorf, Germany
| | - Peter Lasch
- Robert Koch Institute, Centre for Biological Threats and Special Pathogens, Berlin, Germany
| | - Natuschka Lee
- Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
| | - Stefan Leuko
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Thomas Leya
- Extremophile Research & Biobank CCCryo, Fraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalytics and Bioprocesses (IZI-BB), Potsdam, Germany
| | - Andreas Lorek
- German Aerospace Center (DLR), Institute of Planetary Research, Management and Infrastructure, Research Group Astrobiological Laboratories, Berlin, Germany
| | | | - Joachim Meessen
- Institut für Botanik, Heinrich-Heine-Universität (HHU), Düsseldorf, Germany
| | - Sophie Moritz
- University of Potsdam, Biodiversity Research/Systematic Botany, Potsdam, Germany
| | - Ralf Moeller
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Karen Olsson-Francis
- School of Environment, Earth and Ecosystem Sciences, The Open University, Milton Keynes, UK
| | - Silvano Onofri
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy
| | - Sieglinde Ott
- Institut für Botanik, Heinrich-Heine-Universität (HHU), Düsseldorf, Germany
| | - Claudia Pacelli
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy
| | - Olga Podolich
- Institute of Molecular Biology & Genetics of NASU, Kyiv, Ukraine
| | - Elke Rabbow
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Günther Reitz
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Petra Rettberg
- German Aerospace Center (DLR), Institute of Aerospace Medicine, Radiation Biology Department, Köln, Germany
| | - Oleg Reva
- Centre for Bioinformatics and Computational Biology, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa
| | | | | | | | - Laura Selbmann
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy
- Italian National Antarctic Museum (MNA), Mycological Section, Genoa, Italy
| | - Paloma Serrano
- GFZ, German Research Centre for Geosciences, Helmholtz Centre Potsdam, Section 5.3 Geomicrobiology, Telegrafenberg, Potsdam, Germany
- AWI, Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Potsdam, Germany
| | - Ulrich Szewzyk
- TU Berlin, Institute of Environmental Technology, Environmental Microbiology, Berlin, Germany
| | - Cyprien Verseux
- University of Rome Tor Vergata, Department of Biology, Rome, Italy
| | | | - Dirk Wagner
- GFZ, German Research Centre for Geosciences, Helmholtz Centre Potsdam, Section 5.3 Geomicrobiology, Telegrafenberg, Potsdam, Germany
- University of Potsdam, Institute of Earth and Environmental Sciences, Potsdam, Germany
| | - Frances Westall
- CNRS, Centre de Biophysique Moléculaire, UPR 4301, Orléans, France
| | - David Wolter
- German Aerospace Center (DLR), Institute of Planetary Research, Management and Infrastructure, Research Group Astrobiological Laboratories, Berlin, Germany
| | - Laura Zucconi
- Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy
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