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He N, Umer MJ, Yuan P, Wang W, Zhu H, Zhao S, Lu X, Xing Y, Gong C, Liu W, Sun X. Expression dynamics of metabolites in diploid and triploid watermelon in response to flooding. PeerJ 2022. [DOI: 10.7717/peerj.13814] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
Watermelon (Citrullus lanatus) is an economically important cucurbitaceous crop worldwide. The productivity of watermelon is affected by both biotic and abiotic stresses. Flooding has significant impacts on the growth of watermelons by causing oxygen deficiency and a loss of agricultural productivity. Currently, we used the triploid and diploid watermelon Zhengzhou No.3 to study the dynamics of metabolites in response to flooding stress. Quantification of metabolites was performed by UPLC-ESI-MS/MS at different time intervals i.e., 0, 3, 5 and 7 days under flooding stress. We observed that the activities of oxidants were higher in the diploid watermelon, whereas the higher antioxidant activities in the triploid watermelon makes them more resistant to the flooding stress. We also observed that the root activity and the chlorophyll in the triploid watermelon plants were higher as compared to the diploid watermelon plants. Co-expression network analysis leads to the identification of twenty-four hub metabolites that might be the key metabolites linked to flooding tolerance. Resolving the underlying mechanisms for flooding tolerance and identification of key molecules serving as indicators for breeding criteria are necessary for developing flooding-resistant varieties.
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Affiliation(s)
- Nan He
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
- Department of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
| | - Muhammad Jawad Umer
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
- State Key Laboratory of Cotton Biology/Institute of Cotton Research, Chinese Academy of Agricultural Sciences (ICR, CAAS), Anyang, Henan, China
| | - Pingli Yuan
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Weiwei Wang
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Hongju Zhu
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Shengjie Zhao
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Xuqiang Lu
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Yan Xing
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Chengsheng Gong
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Wenge Liu
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, Henan, China
| | - Xiaowu Sun
- Hunan Agricultural University, Changsha, Hunan, China
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Sou HD, Masumori M, Yamanoshita T, Tange T. Primary and secondary aerenchyma oxygen transportation pathways of Syzygium kunstleri (King) Bahadur & R. C. Gaur adventitious roots in hypoxic conditions. Sci Rep 2021; 11:4520. [PMID: 33633329 PMCID: PMC7907123 DOI: 10.1038/s41598-021-84183-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Accepted: 02/09/2021] [Indexed: 11/08/2022] Open
Abstract
Some plant species develop aerenchyma to avoid anaerobic environments. In Syzygium kunstleri (King) Bahadur & R. C. Gaur, both primary and secondary aerenchyma were observed in adventitious roots under hypoxic conditions. We clarified the function of and relationship between primary and secondary aerenchyma. To understand the function of primary and secondary aerenchyma in adventitious roots, we measured changes in primary and secondary aerenchyma partial pressure of oxygen (pO2) after injecting nitrogen (N2) into the stem 0-3 cm above the water surface using Clark-type oxygen microelectrodes. Following N2 injection, a decrease in pO2 was observed in the primary aerenchyma, secondary aerenchyma, and rhizosphere. Oxygen concentration in the primary aerenchyma, secondary aerenchyma, and rhizosphere also decreased after the secondary aerenchyma was removed from near the root base. The primary and secondary aerenchyma are involved in oxygen transport, and in adventitious roots, they participate in the longitudinal movement of oxygen from the root base to root tip. As cortex collapse occurs from secondary growth, the secondary aerenchyma may support or replace the primary aerenchyma as the main oxygen transport system under hypoxic conditions.
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Affiliation(s)
- Hong-Duck Sou
- Urban Forest Research Center, National Institute of Forest Science, Seoul, 02455, South Korea.
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo, 113-8657, Japan.
| | - Masaya Masumori
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo, 113-8657, Japan
| | - Takashi Yamanoshita
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo, 113-8657, Japan
| | - Takeshi Tange
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo, 113-8657, Japan
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Liu M, Hulting A, Mallory-Smith C. Comparison of growth and physiological characteristics between roughstalk bluegrass and tall fescue in response to simulated waterlogging. PLoS One 2017; 12:e0182035. [PMID: 28750041 PMCID: PMC5531569 DOI: 10.1371/journal.pone.0182035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2017] [Accepted: 07/11/2017] [Indexed: 11/19/2022] Open
Abstract
Roughstalk bluegrass (Poa trivialis) is a weed in cool season grass seed production fields in Oregon. Populations of this weed are often greater in fields prone to waterlogging. A greenhouse study was conducted to investigate the morphological and physiological differences between recently established roughstalk bluegrass and tall fescue (Lolium arundinaceum) plants in response to simulated waterlogging. Differences in root morphological development and root respiration were found between waterlogged tall fescue and roughstalk bluegrass. Plants after 4 weeks of waterlogging, leaf number, plant height, and root biomass were reduced more in tall fescue than in roughstalk bluegrass plants. The root length increased 6% in waterlogged tall fescue plants, and decreased 42% in waterlogged roughstalk bluegrass plants, which lead to a shallower root system in roughstalk bluegrass. Root aerenchyma area increased more in waterlogged roughstalk bluegrass than in tall fescue. Alcohol dehydrogenase and lactate dehydrogenase activities increased in the roots of both species, but not in the leaves. The increases were greater in tall fescue than in roughstalk bluegrass. Turf quality, aboveground biomass, photosynthetic capacity, and water-soluble carbohydrate concentrations were reduced by waterlogging, but there were no differences over time or species. Thus, the shallower root system, larger aerenchyma, and reduced fermentation rates were the characteristics most likely to contribute to better waterlogging tolerance in roughstalk bluegrass compared to tall fescue and invasion of roughstalk bluegrass in waterlogged cool season grass seed fields.
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Affiliation(s)
- Mingyang Liu
- Department of Crop and Soil Science, Oregon State University, Corvallis, Oregon, United States of America
| | - Andrew Hulting
- Department of Crop and Soil Science, Oregon State University, Corvallis, Oregon, United States of America
| | - Carol Mallory-Smith
- Department of Crop and Soil Science, Oregon State University, Corvallis, Oregon, United States of America
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Atwell BJ, Greenway H, Colmer TD. Efficient use of energy in anoxia-tolerant plants with focus on germinating rice seedlings. THE NEW PHYTOLOGIST 2015; 206:36-56. [PMID: 25472708 DOI: 10.1111/nph.13173] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2014] [Accepted: 10/09/2014] [Indexed: 05/08/2023]
Abstract
Anoxia tolerance in plants is distinguished by direction of the sparse supply of energy to processes crucial to cell maintenance and sometimes to growth, as in rice seedlings. In anoxic rice coleoptiles energy is used to synthesise proteins, take up K(+) , synthesise cell walls and lipids, and in cell maintenance. Maintenance of electrochemical H(+) gradients across the tonoplast and plasma membrane is crucial for solute compartmentation and thus survival. These gradients sustain some H(+) -solute cotransport and regulate cytoplasmic pH. Pyrophosphate (PPi ), the alternative energy donor to ATP, allows direction of energy to the vacuolar H(+) -PPi ase, sustaining H(+) gradients across the tonoplast. When energy production is critically low, operation of a biochemical pHstat allows H(+) -solute cotransport across plasma membranes to continue for at least for 18 h. In active (e.g. growing) cells, PPi produced during substantial polymer synthesis allows conversion of PPi to ATP by PPi -phosphofructokinase (PFK). In quiescent cells with little polymer synthesis and associated PPi formation, the PPi required by the vacuolar H(+) -PPi ase and UDPG pyrophosphorylase involved in sucrose mobilisation via sucrose synthase might be produced by conversion of ATP to PPi through reversible glycolytic enzymes, presumably pyruvate orthophosphate dikinase. These hypotheses need testing with species characterised by contrasting anoxia tolerance.
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Affiliation(s)
- Brian J Atwell
- Department of Biological Sciences, Faculty of Science, Macquarie University, Sydney, 2109, NSW, Australia
| | - Hank Greenway
- School of Plant Biology and the UWA Institute of Agriculture, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia
| | - Timothy D Colmer
- School of Plant Biology and the UWA Institute of Agriculture, The University of Western Australia, 35 Stirling Highway, Crawley, 6009, WA, Australia
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Kurniasih B, Greenway H, Colmer TD. Tolerance of submerged germinating rice to 50-200 mM NaCl in aerated solution. PHYSIOLOGIA PLANTARUM 2013; 149:222-233. [PMID: 23379468 DOI: 10.1111/ppl.12029] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2012] [Revised: 01/15/2013] [Accepted: 01/17/2013] [Indexed: 06/01/2023]
Abstract
This paper concerns tolerance to 50-200 mM NaCl of submerged rice (Oryza sativa cv. Amaroo) during germination and the first 138-186 h of development in aerated solution. Rice was able to germinate and the seedlings even tolerated exposure to 200 mM NaCl, albeit with severe growth restrictions. After return to 0.3 mM NaCl, growth increased, indicating that even at 200 mM NaCl there was no irreparable injury. Osmotic adjustment was achieved by using Na⁺ and Cl⁻ as the major osmotica. At 200 mM NaCl commenced at sowing, the shoot Na⁺ and Cl⁻ concentrations between 50-110 h were about 210 and 260 mM, respectively, i.e. above the external concentration. Thus, there was a high tissue tolerance to NaCl. The internal concentrations declined subsequently, concurrent with a decline in growth. At 50-200 mM NaCl, the contributions from ions to πsap were 81-92% in roots and 62-74% in shoots. The assessed turgor pressures at 200 mM NaCl were 0.33 MPa in shoots and 0.15 MPa in roots, compared to 0.62 and 0.43 MPa at 0.3 mM NaCl. In the General Discussion section, we compare the different responses of submerged seedlings to the responses of transpiring rice plants, reported in the literature, and suggest that the submerged system is useful to evaluate effects of NaCl on turgor pressure and particularly to establish whether there are specific effects of Na⁺ and Cl⁻ in tissues.
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Affiliation(s)
- Budiastuti Kurniasih
- School of Plant Biology (MO84), The University of Western Australia, Crawley, 6009, Western Australia, Australia
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Mugnai S, Marras AM, Mancuso S. Effect of hypoxic acclimation on anoxia tolerance in Vitis roots: response of metabolic activity and K+ fluxes. PLANT & CELL PHYSIOLOGY 2011; 52:1107-16. [PMID: 21551160 DOI: 10.1093/pcp/pcr061] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The effect of a hypoxic pre-treatment (HPT) on improving tolerance to prolonged anoxia conditions in two contrasting Vitis species (V. riparia, anoxia tolerant; V. rupestris, anoxia sensitive) was evaluated. The energy economy of root cells was studied by measuring heat production, the activity of pyruvate decarboxylase (PDC) and alcohol dehdrogenase (ADH), ethanol and ATP production, and K(+) fluxes. The results showed that HPT is an effective tool in order to maintain a sustainable metabolic performance in both the species under anoxia conditions, especially in sensitive species such as V. rupestris. Our results showed that the improved tolerance was mainly driven by: (i) an enhanced activity of key enzymes in alcohol fermentation (ADC and PDC); (ii) the capability to maintain a higher level of respiration, evidenced by a lesser decrease in heat development and ATP production; and (iii) the maintenance of a better ion homeostasis (highlighted by measurement of K(+) fluxes) and K(+) channel functionality.
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Affiliation(s)
- Sergio Mugnai
- Department of Plant, Soil and Environmental Sciences, University of Florence, Florence, Italy.
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Gorai M, Ennajeh M, Song J, Khemira H, Neffati M. Changes in leaf gas exchange, water relations, biomass production and solute accumulation in Phragmites australis under hypoxic conditions. ACTA ACUST UNITED AC 2011. [DOI: 10.1016/j.chnaes.2010.12.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Takayanagi S, Takagi Y, Araki R, Hasegawa H. High-affinity nitrate uptake by rice (Oryza sativa) coleoptiles. JOURNAL OF PLANT RESEARCH 2011; 124:305-309. [PMID: 20862512 DOI: 10.1007/s10265-010-0375-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2010] [Accepted: 08/20/2010] [Indexed: 05/29/2023]
Abstract
Nitrate uptake by rice coleoptiles was evaluated using ¹⁵N-nitrate in relation to the expression of high-affinity nitrate uptake-related genes, OsNRT2s (OsNRT2.1-2.4) and OsNAR2s (OsNAR2.1 and 2.2). Apparent nitrate uptake by coleoptiles was about one-sixth of that by hydroponically cultured seedling roots. Real-time RT-PCR analysis revealed that OsNRT2.1, a root-specific key gene of inducible high-affinity transport system for nitrate, was most strongly induced in coleoptiles following nitrate supply initiation, while other OsNRT2s and OsNAR2s showed modest induction. These results suggest that rice coleoptiles may have high-affinity transport systems for nitrate similar to roots, and can be model organs for nutrient uptake by submerged plant shoots.
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Affiliation(s)
- Shu Takayanagi
- Graduate School of Environmental Science, University of Shiga Prefecture, 2500 Hassaka-cho, Hikone, Shiga 522-8533, Japan
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Irfan M, Hayat S, Hayat Q, Afroz S, Ahmad A. Physiological and biochemical changes in plants under waterlogging. PROTOPLASMA 2010; 241:3-17. [PMID: 20066446 DOI: 10.1007/s00709-009-0098-8] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2009] [Accepted: 12/10/2009] [Indexed: 05/21/2023]
Abstract
Waterlogging usually results from overuse and/or poor management of irrigation water and is a serious constraint with damaging effects. The rapidly depleting oxygen from submerged root zone is sensed and plant adjusts expressing anaerobic proteins. Plant cells shift their metabolism towards low energy yielding anaerobic fermentation pathways in the absence of oxygen. Structural modifications are also induced as aerenchyma formation and adventitious rootings, etc. Studies at molecular and biochemical levels to facilitate early perception and subsequent responses have also been worked out to produce resistant transgenic plants. This review explores the sequential changes of plant responses at different levels regarding their defense strategies and efforts made to enhance them, tailoring crucial regulators so that they can withstand waterlogging stress.
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Affiliation(s)
- Mohd Irfan
- Plant Physiology Section, Department of Botany, Aligarh Muslim University, Aligarh 202002, India
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Colmer TD, Voesenek LACJ. Flooding tolerance: suites of plant traits in variable environments. FUNCTIONAL PLANT BIOLOGY : FPB 2009; 36:665-681. [PMID: 32688679 DOI: 10.1071/fp09144] [Citation(s) in RCA: 292] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2009] [Accepted: 06/15/2009] [Indexed: 05/29/2023]
Abstract
Flooding regimes of different depths and durations impose selection pressures for various traits in terrestrial wetland plants. Suites of adaptive traits for different flooding stresses, such as soil waterlogging (short or long duration) and full submergence (short or long duration - shallow or deep), are reviewed. Synergies occur amongst traits for improved internal aeration, and those for anoxia tolerance and recovery, both for roots during soil waterlogging and shoots during submergence. Submergence tolerance of terrestrial species has recently been classified as either the Low Oxygen Quiescence Syndrome (LOQS) or the Low Oxygen Escape Syndrome (LOES), with advantages, respectively, in short duration or long duration (shallow) flood-prone environments. A major feature of species with the LOQS is that shoots do not elongate upon submergence, whereas those with the LOES show rapid shoot extension. In addition, plants faced with long duration deep submergence can demonstrate aspects of both syndromes; shoots do not elongate, but these are not quiescent, as new aquatic-type leaves are formed. Enhanced entries of O2 and CO2 from floodwaters into acclimated leaves, minimises O2 deprivation and improves underwater photosynthesis, respectively. Evolution of 'suites of traits' are evident in wild wetland species and in rice, adapted to particular flooding regimes.
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Affiliation(s)
- T D Colmer
- School of Plant Biology, Faculty of Natural and Agricultural Sciences, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
| | - L A C J Voesenek
- Plant Ecophysiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands
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da Silva IA, Batalha MA. Taxonomic distinctness and diversity of a hyperseasonal savanna in central Brazil. DIVERS DISTRIB 2006. [DOI: 10.1111/j.1472-4642.2006.00264.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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da Silva IA, Batalha MA. Taxonomic distinctness and diversity of a hyperseasonal savanna in central Brazil. DIVERS DISTRIB 2006. [DOI: 10.1111/j.1366-9516.2006.00264.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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Huang S, Ishizawa K, Greenway H, Colmer TD. Manipulation of ethanol production in anoxic rice coleoptiles by exogenous glucose determines rates of ion fluxes and provides estimates of energy requirements for cell maintenance during anoxia. JOURNAL OF EXPERIMENTAL BOTANY 2005; 56:2453-63. [PMID: 16061509 DOI: 10.1093/jxb/eri238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Ethanol production by anoxic, excised, 7-10 mm tips of rice coleoptiles was manipulated using a range of exogenous glucose concentrations. Such a dose-response curve enabled good estimates at which level of ethanol production (and hence by inference ATP production), injury commenced and also allowed assessments of energy requirements for maintenance in anoxia. Rates of net uptake or loss of K+ and P by these excised coleoptile tips were related to rates of ethanol production (r2 of 0.59 and 0.68, respectively). At 72 h anoxia, ATP levels in excised tips were similar at 0, 2.5, and 50 mol m(-3) exogenous glucose, despite large differences in the inferred rates of ATP production. At 96 h anoxia, tips without exogenous glucose had low ATP concentrations; these may be the cause or the consequence of cell injury. In tips without glucose, injury was indicated by losses of K+ and Cl- between 72-96 h anoxia, and during the first hour after re-aeration, while later than 1 h after re-aeration, rates of net uptake were substantially lower than for re-aerated tips previously in anoxia with exogenous glucose. Between 96 h and 124 h anoxia, ion losses from tips without exogenous glucose increased while recovery of net uptake after re-aeration was very sluggish and incomplete. The energy requirement for maintenance of health and survival of anoxic coleoptile tips, expressed on a fresh weight basis, was lower than for three other anoxia-tolerant plant tissues/cells, studied previously. However, the energy requirement on a protein basis was assessed at 1.4 micromol ATP mg(-1) protein h(-1) and this value is 2.6-5.4-fold higher than for the other plant tissues/cells. Yet, this requirement was still only 58-88% of the published values for aerated tissues. The reason for this relatively high ATP requirement per unit protein in anoxic rice coleoptiles remains to be elucidated.
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Affiliation(s)
- Shaobai Huang
- School of Plant Biology, Faculty of Natural and Agricultural Sciences, The University of Western Australia, 35 Stirling Highway, Crawley 6009 WA, Australia
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