Orchid conservation: making the links

Diversity of unique, nonmycorrhizal endophytic fungi in cultivated Phalaenopsis orchids: A pilot study

Orchids comprise one of the largest, most diverse, and most broadly distributed families of flowering plants and contribute significantly to habitat biodiversity. One key aspect of orchid growth and development is the formation of mycorrhizal symbioses with compatible endophytic fungi, which are maintained throughout the life of the plant. Substantial efforts to identify the fungi that form mycorrhizal symbioses across a range of orchid species have often also uncovered numerous nonmycorrhizal, endophytic fungi. These fungi could also have significant effects on orchid growth and development and are beginning to be analyzed more closely, particularly in wild species. The role of endophytic fungi in the production, distribution, and continued growth by the hobbyist of orchids is not known. As an initial step toward characterizing nonmycorrhizal endophytic fungi associated with cultivated orchids, we undertook a survey of fungi residing within roots of Phalaenopsis plants growing in home environments. Sequence analysis of ITS regions amplified from total DNA isolated from roots allowed rapid identification of endophytic fungi to the class level and may offer a useful initial screening method for beneficial species, for example, in horticultural settings. ITS-PCR sequences subsequently obtained from individual fungi cultured from surface-sterilized orchid roots corroborated the findings of the initial screen, while also providing a more complete characterization of the array of fungal taxa that were present. Although lower in diversity than has been reported for orchids growing in the wild, these endophytes have the potential to substantially enhance the growth and disease resistance of horticultural orchids.

Ecological and habitat ranges of orchids in the northernmost regions of their distribution areas: A case study from Ural Mountains, Russia

The Orchidaceae, which is one of the most interesting families of angiosperms, contains a large number of rare species. Despite their acknowledged importance, little attention has been paid to the study of orchids distributed in northern territories. In this study, we determined the syntaxonomical diversity and ecological parameters of orchid habitats in two of Europe's largest protected areas, the Pechoro-Ilychsky Reserve and the Yugyd Va National Park (northeastern European Russia), and then compared our findings to those in other parts of orchid distribution ranges. For this purpose, we studied 345 descriptions of plant communities (releves) containing species from Orchidaceae and defined habitat parameters using Ellenberg indicator values with the community weight mean approach, nonmetric multidimensional scaling (NMS), and relative niche width. We found that orchids were distributed in eight habitat types and 97 plant associations. The largest number of orchid species is found in forest communities. Half of the orchid species under study occur in the mires and rock habitats with open vegetation. Several orchids consistently occur in areas disturbed by human activity. In addition, our study indicates that the main drivers of orchid distribution across the vegetation types are light and soil nitrogen. Our analysis of the ecological parameters of orchid habitats indicates that some orchid species can be classified as habitat specialists that are confined to a relatively narrow ecological niche in the Urals (e.g., Goodyera repens, Cypripedium guttatum and Dactylorhiza maculata). Several other species (e.g. Neottia cordata and Dactylorhiza fuchsia) grow under diverse ecological parameters.

Soil properties and plant species can predict population size and potential introduction sites of the endangered orchid Cypripedium calceolus

Background and Aims

To counteract the ongoing worldwide biodiversity loss, conservation actions are required to re-establish populations of threatened species. Two key factors predominantly involved in finding the most suitable habitats for endangered plant species are the surrounding plant community composition and the physicochemical parameters of the soil rooting zone. However, such factors are likely to be context- and species-dependent, so it remains unclear to what extent they influence the performance of target species.

Methods

We studied large and small Swiss populations of the endangered orchid Cypripedium calceolus. We measured functional traits related to C. calceolus plant and population performance (clonal patch area, plant height, number, of leaf, stems, flowers and fruits), realized vegetation surveys, soil profile analyses, and tested for relationships between plant traits and the surrounding vegetation structure or soil physicochemical parameters.

Results

Large populations contained bigger patches with more stems and leaves, and produced more flower per individual than small populations. Neither vegetation alliances nor soil classes per se could predict C. calceolus functional traits and population size. However, functional traits explaining population performance and size were related to specific soil parameters (soil organic matter content, pH and phosphorus), in addition to a combination of presence-absence of plant indicator species, relating to ecotones between forests and clearings.

Conclusion

We show that even for species that can grow across a wide range of vegetation groups both indicator species and specific soil parameters can be used to assess the most favourable sites to implement (re)-introduction actions.

Supplementary Information

The online version contains supplementary material available at 10.1007/s11104-023-05945-4.

The effect of global warming on the Australian endemic orchid Cryptostylis leptochila and its pollinator

Ecological stability together with the suitability of abiotic conditions are crucial for long-term survival of any organism and the maintenance of biodiversity and self-sustainable ecosystems relies on species interactions. By influencing resource availability plants affect the composition of plant communities and ultimately ecosystem functioning. Plant-animal interactions are very complex and include a variety of exploitative and mutualistic relationships. One of the most important mutualistic interactions is that between plants and their pollinators. Coevolution generates clustered links between plants and their pollen vectors, but the pollination and reproductive success of plants is reduced by increase in the specialization of plant-animal interactions. One of the most specialized types of pollination is sexual deception, which occurs almost exclusively in Orchidaceae. In this form of mimicry, male insects are attracted to orchid flowers by chemical compounds that resemble insect female sex pheromones and pollinate the flowers during attempted copulations. These interactions are often species-specific with each species of orchid attracting only males of one or very few closely related species of insects. For sexually deceptive orchids the presence of a particular pollen vector is crucial for reproductive success and any reduction in pollinator availability constitutes a threat to the orchid. Because global warming is rapidly becoming the greatest threat to all organisms by re-shaping the geographical ranges of plants, animals and fungi, this paper focuses on predicting the effect of global warming on Cryptostylis leptochila, a terrestrial endemic in eastern Australia that is pollinated exclusively via pseudo copulation with Lissopimpla excelsa. As a species with a single pollinator this orchid is a perfect model for studies on the effect of global warming on plants and their pollen vectors. According to our predictions, global warming will cause a significant loss of suitable niches for C. leptochila. The potential range of this orchid will be 36%-75% smaller than currently and as a result the Eastern Highlands will become unsuitable for C. leptochila. On the other hand, some new niches will become available for this species in Tasmania. Simultaneously, climate change will result in a substantial expansion of niches suitable for the pollinator (44-82%). Currently ca. 71% of the geographical range of the orchid is also suitable for L. excelsa, therefore, almost 30% of the areas occupied by C. leptochila already lack the pollen vector. The predicted availability of the pollen vector increased under three of the climate change scenarios analysed. The predicted habitat loss is a serious threat to this orchid even with the potential colonization of Tasmania by this plant. In the reduced range of C. leptochila the pollen vector will also be present assuring fruit set in populations of this orchid. The genetic pool of the populations in New South Wales and Queensland will probably be lost.

Impact of weather conditions on the seasonal development, population structure and reproductive success of Dactylorhiza incarnata s. l. (Orchidaceae, Liliopsida) in the Komi Republic

The results of our eight-year study of a population of the rare orchid Dactylorhiza incarnata subsp. cruenta at the northern limit of its range (the Komi Republic) are presented. Weather factors (air temperature and precipitations) were revealed to influence features of the small and big life cycles of this species. The number of plants in the studied population was influenced by the weather conditions of the previous growing season, positively by the temperature in August and negatively by frosts in October. The number of generative (flowering) plants had a positive correlation with the air temperature in July of the previous vegetative season. The fruit set was high (71.2%) and negatively associated with precipitation during flowering of this species. The seed number per fruit in the studied population (9,831 pcs on average) was higher than that in the more southern parts of the range of this species. This indicator, as well as the real seed productivity of the species, is positively related to the level of moisture availability of the current growing season. The seed production is high, from 34 thousand to 154.6 thousand seeds per 1 m2 in several study years, it is positively associated with the sum of active temperatures of the previous growing season. The presence of juvenile individuals (10.0–31.7%) over all study years indicates a successful seed reproduction in this population.

Effects of geographic isolation on the Bulbophyllum chloroplast genomes

BACKGROUND

Because chloroplast (cp) genome has more conserved structures than nuclear genome and mitochondrial genome, it is a useful tool in estimating the phylogenetic relationships of plants. With a series of researches for cp genomes, there have been comprehensive understandings about the cp genome features. The genus Bulbophyllum widely distributed in Asia, South America, Australia and other places. Therefore, it is an excellent type genus for studying the effects of geographic isolation.

RESULTS

In this study, the cp genomes of nine Bulbophyllum orchids were newly sequenced and assembled using the next-generation sequencing technology. Based on 19 Asian (AN) and eight South American (SA) Bulbophyllum orchids, the cp genome features of AN clade and SA clade were compared. Comparative analysis showed that there were considerable differences in overall cp genome features between two clades in three aspects, including basic cp genome features, SSC/IR_B junctions (J_SBs) and mutational hotspots. The phylogenetic analysis and divergence time estimation results showed that the AN clade has diverged from the SA clade in the late Oligocene (21.50-30.12 mya). After estimating the occurrence rates of the insertions and deletions (InDels), we found that the change trends of cp genome structures between two clades were different under geographic isolation. Finally, we compared selective pressures on cp genes and found that long-term geographic isolation made AN and SA Bulbophyllum cp genes evolved variably.

CONCLUSION

The results revealed that the overall structural characteristics of Bulbophyllum cp genomes diverged during the long-term geographic isolation, and the crassulacean acid metabolism (CAM) pathway may play an important role in the Bulbophyllum species evolution.

'Fly to a Safer North': Distributional Shifts of the Orchid Ophrys insectifera L. Due to Climate Change

Numerous orchid species around the world have already been affected by the ongoing climate change, displaying phenological alterations and considerable changes to their distributions. The fly orchid (Ophrys insectifera L.) is a well-known and distinctive Ophrys species in Europe, with a broad distribution across the continent. This study explores the effects of climate change on the range of O. insectifera, using a species distribution models (SDMs) framework that encompasses different climatic models and scenarios for the near- and long-term future. The species' environmentally suitable area is projected to shift northwards (as expected) but downhill (contrary to usual expectations) in the future. In addition, an overall range contraction is predicted under all investigated combinations of climatic models and scenarios. While this is moderate overall, it includes some regions of severe loss and other areas with major gains. Specifically, O. insectifera is projected to experience major area loss in its southern reaches (the Balkans, Italy and Spain), while it will expand its northern limits to North Europe, with the UK, Scandinavia, and the Baltic countries exhibiting the largest gains.

How Does Deforestation Affect the Growth of Cypripedium (Orchidaceae) Species? A Simulation Experiment in Northeast China

Due to wild habitat destruction, Cypripedium is among the most endangered groups in China. Determining how Cypripedium respond to environmental changes is curial to their conservation. However, less is known about the effect of deforestation on the growth of Cypripedium. In this study, we selected four Cypripedium species in Northeast China, and conducted conservation-based transplantation simulating deforestation to explore the impact of increased light intensity on the growth of Cypripedium. After three years, the maximum net photosynthetic rate was decreased by 15.9%, 11.5%, 13.6% and 5.3% for C. calceolus L., C. guttatum Sw., C. macranthos Sw. and C.×ventricosum Sw., respectively, resulting in poor viability, manifesting as shorter and thinner shoots, and smaller leaves. Unexpectedly, no significant traits shifts were found in the roots across four species, which may be related to the long root lifespan and conservation. Our research confirmed that increased light intensity caused by deforestation would lead to an increase in respirate cost and a decrease in photosynthate accumulation, and consequently the recession of plant growth. Except for habitat loss, individual plant reduction caused by deforestation could be responsible for the population decline of Cypripedium.

Orchid Reintroduction Based on Seed Germination-Promoting Mycorrhizal Fungi Derived From Protocorms or Seedlings

Orchids are among the most endangered in the plant kingdom. Lack of endosperm in their seeds renders orchids to depend on nutrients provided by orchid mycorrhizal fungi (OMF) for seed germination and seedling formation in the wild. OMF that parasitize in germination seeds is an essential element for orchid seedling formation, which can also help orchid reintroduction. Considering the limitations of the previous orchid reintroduction technology based on seed germination-promoting OMF (sgOMF) sourced from orchid roots, an innovative approach is proposed here in which orchid seeds are directly co-sown with sgOMF carrying ecological specificity from protocorms/seedlings. Based on this principle, an integrative and practical procedure concerning related ecological factors is further raised for re-constructing long-term and self-sustained orchid populations. We believe that this new approach will benefit the reintroduction of endangered orchids in nature.

Environmental and Management Effects on Demographic Processes in the U.S. Threatened Platanthera leucophaea (Nutt.) Lindl. (Orchidaceae)

Populations of the U.S. threatened orchid, Platanthera leucophaea, are restricted to fragmented grassland and wetland habitats. We address the long-term (1998–2020) interactive effects of habitat (upland prairie vs. wetland), fire management (burned vs. unburned) and climatic variation, as well as pollination crossing effects, on population demography in 42 populations. Our analysis revealed the consistent interactive effects of habitat, dormant season burning, and climatic variation on flowering, reproduction, and survival. Burning increased flowering and population size under normal or greater than normal precipitation but may have a negative effect during drought years apparently if soil moisture stress reduces flowering and increases mortality. Trends in the number of flowering plants in populations also correspond to precipitation cycles. As with flowering and fecundity, survival is significantly affected by the interactive effects of habitat, fire, and climate. This study supports previous studies finding that P. leucophaea relies on a facultative outcrossing breeding system. Demographic modeling indicated that fire, normal precipitation, and outcrossing yielded greater population growth, and that greater fire frequency increased population persistence. It also revealed an ecologically driven demographic switch, with wetlands more dependent upon survivorship than fecundity, and uplands more dependent on fecundity than survivorship. Our results facilitate an understanding of environmental and management effects on the population demography of P. leucophaea in the prairie region of its distribution. Parallel studies are needed in the other habitats such as wetlands, especially in the eastern part of the range of the species, to provide a more complete picture.

Illegal harvesting and livestock grazing threaten the endangered orchid Dactylorhiza hatagirea (D. Don) Soó in Nepalese Himalaya

Harvesting of orchids for medicine and salep production is a traditional practice, and increasing market demand is spurring illegal harvest. Ethno-ecological studies in combination with the effect of anthropogenic disturbance are lacking for orchids. We compared population density and structure, and tuber biomass of Dactylorhiza hatagirea (D. Don) Soó for three years in two sites: Manang, where harvesting of medicinal plants was locally regulated (protected), and Darchula, where harvesting was locally unregulated (unprotected). Six populations were studied along an elevation gradient by establishing 144 temporary plots (3 × 3 m2) from 3,400 to 4,600 m elevations. Mean density of D. hatagirea was significantly higher in the locally protected (1.31 ± 0.17 plants/m2) than in the unprotected (0.72 ± 0.06 plants/m2) site. The protected site showed stable population density with high reproductive fitness and tuber biomass over the three-year period. A significant negative effect (p < .1) of relative radiation index (RRI) on the density of the adult vegetative stage and a positive effect of herb cover on juvenile and adult vegetative stages were found using mixed zero-inflated Poisson (mixed ZIP) models. The densities of different life stages were highly sensitive to harvesting and livestock grazing. Significant interactions between site and harvesting and grazing indicated particularly strong negative effects of these disturbances on densities of juvenile and adult reproductive stages in the unprotected site. Semi-structured interviews were conducted with informants (n = 186) in the villages and at the ecological survey sites. Our interview results showed that at the protected site people are aware of the conservation status and maintain sustainable populations, whereas the opposite was the case at the unprotected site where the populations are threatened. Sustainability of D. hatagirea populations, therefore, largely depends on controlling illegal and premature harvesting and unregulated livestock grazing, thus indicating the need for permanent monitoring of the species.

An Orchid in Retrograde: Climate-Driven Range Shift Patterns of Ophrys helenae in Greece

Climate change is regarded as one of the most important threats to plants. Already species around the globe are showing considerable latitudinal and altitudinal shifts. Helen's bee orchid (Ophrys helenae), a Balkan endemic with a distribution center in northwestern Greece, is reported to be expanding east and southwards. Since this southeastern movement goes against the usual expectations, we investigated via Species Distribution Modelling, whether this pattern is consistent with projections based on the species' response to climate change. We predicted the species' future distribution based on three different climate models in two climate scenarios. We also explored the species' potential distribution during the Last Interglacial and the Last Glacial Maximum. O. helenae is projected to shift mainly southeast and experience considerable area changes. The species is expected to become extinct in the core of its current distribution, but to establish a strong presence in the mid- and high-altitude areas of the Central Peloponnese, a region that could have provided shelter in previous climatic extremes.

Precipitation contributes to plant height, but not reproductive effort, for western prairie fringed orchid (Platanthera praeclara Sheviak & Bowles): Evidence from herbarium records

The western fringed prairie orchid (WFPO) is a rare plant found in mesic to wet tallgrass prairies in the Great Plains and Midwest regions of the United States. The size of WFPO populations varies considerably from year to year, and studies have suggested that population size is dependent on precipitation during critical periods in the plant's annual development. We hypothesized that plant height and reproductive effort would also be controlled by precipitation, either during these periods or over a broader period. We acquired available images of WFPO from 21 herbaria, and of these 141 individual plants had information adequate for analysis, although some population/year combinations were represented multiple times. For each specimen, we measured plant height (cm) and reproductive effort (as measured by total flower and bud count). We used bootstrapped linear regression, randomly selecting one individual from each population/year combination, to compare precipitation models, both during critical periods and the various summaries. We found that precipitation during the phenologically critical periods was a poor predictor of plant height and reproductive effort. Of the broader precipitation variables, accumulated precipitation from January 1 to collection date best described plant height. We also used correlations to detect a relationship among the variables WFPO height, reproductive effort, precipitation, latitude, and year of collection. Year of specimen collection was negatively correlated with WFPO plant height and accumulated precipitation, suggesting that both have declined in more recent years. Negative correlations with latitude also suggest height and precipitation decrease in the northern part of WFPO's range. Reproductive effort was not related to tested precipitation variables; however, it was weakly correlated with plant height. Although the results are limited, this study leverages available data and makes inferences on WFPO biology over broad ranges of time (1894-2012) and latitude (37.5°-49.9°).

Distribution and conservation of species is misestimated if biotic interactions are ignored: the case of the orchid Laelia speciosa

The geographic distribution of species depends on their relationships with climate and on the biotic interactions of the species. Ecological Niche Models (ENMs) mainly consider climatic variables only and may tend to overestimate these distributions, especially for species strongly restricted by biotic interactions. We identified the preference of Laelia speciosa for different host tree species and include this information in an ENM. The effect of habitat loss and climate change on the distribution of these species was also estimated. Although L. speciosa was recorded as epiphyte at six tree species, 96% of the individuals were registered at one single species (Quercus deserticola), which indicated a strong biotic interaction. We included the distribution of this host tree as a biotic variable in the ENM of L. speciosa. The contemporary distribution of L. speciosa is 52,892 km2, which represent 4% of Mexican territory and only 0.6% of the distribution falls within protected areas. Habitat loss rate for L. speciosa during the study period was 0.6% per year. Projections for 2050 and 2070 under optimistic and pessimistic climate change scenarios indicated a severe reduction in its distribution. Climaticaly suitable areas will also shift upwards (200-400 m higher). When estimating the distribution of a species, including its interactions can improve the performance of the ENMs, allowing for more  accurate estimates of the actual distribution of the species, which in turn allows for better conservation strategies.

A comparative plastomics approach reveals available molecular markers for the phylogeographic study of Dendrobium huoshanense, an endangered orchid with extremely small populations

Comparative plastomics approaches have been used to identify available molecular markers for different taxonomic level studies of orchid species. However, the adoption of such methods has been largely limited in phylogeographic studies. Therefore, in this study, Dendrobium huoshanense, an endangered species with extremely small populations, was used as a model system to test whether the comparative plastomic approaches could screen available molecular markers for the phylogeographic study. We sequenced two more plastomes of D. huoshanense and compared them with our previously published one. A total of 27 mutational hotspot regions and six polymorphic cpSSRs have been screened for the phylogeographic studies of D. huoshanense. The cpDNA haplotype data revealed that the existence of haplotype distribution center was located in Dabieshan Mts. (Huoshan). The genetic diversity and phylogenetic analyses showed that the populations of D. huoshanense have been isolated and evolved independently for long period. On the contrary, based on cpSSR data, the genetic structure analysis revealed a mixed structure among the populations in Anhui and Jiangxi province, which suggested that the hybridization or introgression events have occurred among the populations of D. huoshanense. These results indicated that human activities have played key roles in shaping the genetic diversity and distributional patterns of D. huoshanense. According to our results, both two markers showed a high resolution for the phylogeographic studies of D. huoshanense. Therefore, we put forth that comparative plastomic approaches could revealed available molecular markers for phylogeographic study, especially for the species with extremely small populations.

Orchid conservation: how can we meet the challenges in the twenty-first century?

With c. 28,000 species, orchids are one of the largest families of flowering plants, and they are also one of the most threatened, in part due to their complex life history strategies. Threats include habitat destruction and climate change, but many orchids are also threatened by unsustainable (often illegal and/or undocumented) harvest for horticulture, food or medicine. The level of these threats now outstrips our abilities to combat them at a species-by-species basis for all species in such a large group as Orchidaceae; if we are to be successful in conserving orchids for the future, we will need to develop approaches that allow us to address the threats on a broader scale to complement focused approaches for the species that are identified as being at the highest risk.

Orchid conservation: how can we meet the challenges in the twenty-first century?

With c. 28,000 species, orchids are one of the largest families of flowering plants, and they are also one of the most threatened, in part due to their complex life history strategies. Threats include habitat destruction and climate change, but many orchids are also threatened by unsustainable (often illegal and/or undocumented) harvest for horticulture, food or medicine. The level of these threats now outstrips our abilities to combat them at a species-by-species basis for all species in such a large group as Orchidaceae; if we are to be successful in conserving orchids for the future, we will need to develop approaches that allow us to address the threats on a broader scale to complement focused approaches for the species that are identified as being at the highest risk.

Iteration expansion and regional evolution: phylogeography of Dendrobium officinale and four related taxa in southern China

The genus Dendrobium was used as a case study to elucidate the evolutionary history of Orchidaceae in the Sino-Japanese Floristic Region (SJFR) and Southeast Asia region. These evolutionary histories remain largely unknown, including the temporal and spatial distribution of the evolutionary events. The present study used nuclear and plastid DNA to determine the phylogeography of Dendrobium officinale and four closely related taxa. Plastid DNA haplotype and nuclear data were shown to be discordant, suggesting reticulate evolution drove the species' diversification. Rapid radiation and genetic drift appeared to drive the evolution of D. tosaense and D. flexicaule, whereas introgression or hybridization might have been involved in the evolution of D. scoriarum and D. shixingense. The phylogeographical structure of D. officinale revealed that core natural distribution regions might have served as its glacial refuges. In recent years, human disturbances caused its artificial migration and population extinction. The five taxa may have originated from the Nanling Mountains and the Yungui Plateau and then migrated northward or eastward. After the initial iteration expansion, D. officinale populations appeared to experience the regional evolutionary patterns in different regions and follow the sequential or rapid decline in gene exchange.

Orchid conservation: further links

BACKGROUND

Due in great part to their often complex interactions with mycorrhizal fungi, pollinators and host trees, Orchidaceae present particular challenges for conservation. Furthermore, orchids, as potentially the largest family of angiosperms with >26000 species, species complexes and frequent hybrid formation, are complex to catalogue. Following a highlight in 2015, a further seven papers focusing on orchids, their interactions with beneficial organisms, pollinators and mycorrhiza, and other factors relating to their conservation, including threats from human utilization and changing land use, are presented here.

CONCLUSIONS

The production of an online flora of all known plants and an assessment of the conservation status of all known plant species as far as possible, to guide conservation action are the first two targets of the Global Strategy for Plant Conservation Without knowing how many species there are and how they should be circumscribed, neither of these targets is achievable. Orchids are a fascinating subject for fundamental research with rapid species evolution, specific organ structure and development, but they also suffer from high levels of threat. Effective orchid conservation must take account of the beneficial interactions with fungi and pollinators and the potentially detrimental effects of over-collection and changes in land use.