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Manjarrez LF, de María N, Vélez MD, Cabezas JA, Mancha JA, Ramos P, Pizarro A, Blanco-Urdillo E, López-Hinojosa M, Cobo-Simón I, Guevara MÁ, Díaz-Sala MC, Cervera MT. Comparative Stem Transcriptome Analysis Reveals Pathways Associated with Drought Tolerance in Maritime Pine Grafts. Int J Mol Sci 2024; 25:9926. [PMID: 39337414 PMCID: PMC11432578 DOI: 10.3390/ijms25189926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2024] [Revised: 09/11/2024] [Accepted: 09/12/2024] [Indexed: 09/30/2024] Open
Abstract
The maritime pine (Pinus pinaster Ait.) is a highly valuable Mediterranean conifer. However, recurrent drought events threaten its propagation and conservation. P. pinaster populations exhibit remarkable differences in drought tolerance. To explore these differences, we analyzed stem transcriptional profiles of grafts combining genotypes with contrasting drought responses under well-watered and water-stress regimes. Our analysis underscored that P. pinaster drought tolerance is mainly associated with constitutively expressed genes, which vary based on genotype provenance. However, we identified key genes encoding proteins involved in water stress response, abscisic acid signaling, and growth control including a PHD chromatin regulator, a histone deubiquitinase, the ABI5-binding protein 3, and transcription factors from Myb-related, DOF NAC and LHY families. Additionally, we identified that drought-tolerant rootstock could enhance the drought tolerance of sensitive scions by regulating the accumulation of transcripts involved in carbon mobilization, osmolyte biosynthesis, flavonoid and terpenoid metabolism, and reactive oxygen species scavenging. These included genes encoding galactinol synthase, CBL-interacting serine/threonine protein kinase 5, BEL1-like homeodomain protein, dihydroflavonol 4-reductase, and 1-deoxy-D-xylulose-5-phosphate. Our results revealed several hub genes that could help us to understand the molecular and physiological response to drought of conifers. Based on all the above, grafting with selected drought-tolerant rootstocks is a promising method for propagating elite recalcitrant conifer species, such as P. pinaster.
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Affiliation(s)
- Lorenzo Federico Manjarrez
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - Nuria de María
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - María Dolores Vélez
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - José Antonio Cabezas
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - José Antonio Mancha
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - Paula Ramos
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - Alberto Pizarro
- Departamento de Ciencias de la Vida, Universidad de Alcalá (UAH), 28805 Alcalá de Henares, Spain
| | - Endika Blanco-Urdillo
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - Miriam López-Hinojosa
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - Irene Cobo-Simón
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - María Ángeles Guevara
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
| | - María Carmen Díaz-Sala
- Departamento de Ciencias de la Vida, Universidad de Alcalá (UAH), 28805 Alcalá de Henares, Spain
| | - María Teresa Cervera
- Departamento de Ecología y Genética Forestal, Instituto de Ciencias Forestales (ICIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria-Consejo Superior de Investigaciones Científicas (INIA-CSIC), 28040 Madrid, Spain
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Férriz M, Martin-Benito D, Fernández-de-Simón MB, Conde M, García-Cervigón AI, Aranda I, Gea-Izquierdo G. Functional phenotypic plasticity mediated by water stress and [CO2] explains differences in drought tolerance of two phylogenetically close conifers. TREE PHYSIOLOGY 2023; 43:909-924. [PMID: 36809504 PMCID: PMC10255776 DOI: 10.1093/treephys/tpad021] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 02/15/2023] [Indexed: 06/11/2023]
Abstract
Forests are threatened globally by increased recurrence and intensity of hot droughts. Functionally close coexisting species may exhibit differences in drought vulnerability large enough to cause niche differentiation and affect forest dynamics. The effect of rising atmospheric [CO2], which could partly alleviate the negative effects of drought, may also differ between species. We analysed functional plasticity in seedlings of two taxonomically close pine species (Pinus pinaster Ait., Pinus pinea L.) under different [CO2] and water stress levels. The multidimensional functional trait variability was more influenced by water stress (preferentially xylem traits) and [CO2] (mostly leaf traits) than by differences between species. However, we observed differences between species in the strategies followed to coordinate their hydraulic and structural traits under stress. Leaf 13C discrimination decreased with water stress and increased under elevated [CO2]. Under water stress both species increased their sapwood area to leaf area ratios, tracheid density and xylem cavitation, whereas they reduced tracheid lumen area and xylem conductivity. Pinus pinea was more anisohydric than P. pinaster. Pinus pinaster produced larger conduits under well-watered conditions than P. pinea. Pinus pinea was more tolerant to water stress and more resistant to xylem cavitation under low water potentials. The higher xylem plasticity in P. pinea, particularly in tracheid lumen area, expressed a higher capacity of acclimation to water stress than P. pinaster. In contrast, P. pinaster coped with water stress comparatively more by increasing plasticity of leaf hydraulic traits. Despite the small differences observed in the functional response to water stress and drought tolerance between species, these interspecific differences agreed with ongoing substitution of P. pinaster by P. pinea in forests where both species co-occur. Increased [CO2] had little effect on the species-specific relative performance. Thus, a competitive advantage under moderate water stress of P. pinea compared with P. pinaster is expected to continue in the future.
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Affiliation(s)
- M Férriz
- ICIFOR-INIA, CSIC. Ctra La Coruña km 7.5, 28040 Madrid, Spain
| | - D Martin-Benito
- ICIFOR-INIA, CSIC. Ctra La Coruña km 7.5, 28040 Madrid, Spain
| | | | - M Conde
- ICIFOR-INIA, CSIC. Ctra La Coruña km 7.5, 28040 Madrid, Spain
| | - A I García-Cervigón
- Department of Biology and Geology, Physics and Inorganic Chemistry Rey Juan Carlos University, c/Tulipán s/n, 28933 Móstoles, Spain
| | - I Aranda
- ICIFOR-INIA, CSIC. Ctra La Coruña km 7.5, 28040 Madrid, Spain
| | - G Gea-Izquierdo
- ICIFOR-INIA, CSIC. Ctra La Coruña km 7.5, 28040 Madrid, Spain
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de María N, Guevara MÁ, Perdiguero P, Vélez MD, Cabezas JA, López‐Hinojosa M, Li Z, Díaz LM, Pizarro A, Mancha JA, Sterck L, Sánchez‐Gómez D, Miguel C, Collada C, Díaz‐Sala MC, Cervera MT. Molecular study of drought response in the Mediterranean conifer Pinus pinaster Ait.: Differential transcriptomic profiling reveals constitutive water deficit-independent drought tolerance mechanisms. Ecol Evol 2020; 10:9788-9807. [PMID: 33005345 PMCID: PMC7520194 DOI: 10.1002/ece3.6613] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Revised: 06/19/2020] [Accepted: 06/29/2020] [Indexed: 12/27/2022] Open
Abstract
Adaptation of long-living forest trees to respond to environmental changes is essential to secure their performance under adverse conditions. Water deficit is one of the most significant stress factors determining tree growth and survival. Maritime pine (Pinus pinaster Ait.), the main source of softwood in southwestern Europe, is subjected to recurrent drought periods which, according to climate change predictions for the years to come, will progressively increase in the Mediterranean region. The mechanisms regulating pine adaptive responses to environment are still largely unknown. The aim of this work was to go a step further in understanding the molecular mechanisms underlying maritime pine response to water stress and drought tolerance at the whole plant level. A global transcriptomic profiling of roots, stems, and needles was conducted to analyze the performance of siblings showing contrasted responses to water deficit from an ad hoc designed full-sib family. Although P. pinaster is considered a recalcitrant species for vegetative propagation in adult phase, the analysis was conducted using vegetatively propagated trees exposed to two treatments: well-watered and moderate water stress. The comparative analyses led us to identify organ-specific genes, constitutively expressed as well as differentially expressed when comparing control versus water stress conditions, in drought-sensitive and drought-tolerant genotypes. Different response strategies can point out, with tolerant individuals being pre-adapted for coping with drought by constitutively expressing stress-related genes that are detected only in latter stages on sensitive individuals subjected to drought.
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Affiliation(s)
- Nuria de María
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
| | - María Ángeles Guevara
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
| | - Pedro Perdiguero
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Centro de Investigación en Sanidad Animal (CISA‐INIA)MadridSpain
- Departamento de Cultivos HerbáceosCentro de Investigación Agroforestal de AlbaladejitoCuencaSpain
| | - María Dolores Vélez
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
| | - José Antonio Cabezas
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
| | - Miriam López‐Hinojosa
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
| | - Zhen Li
- Ghent University Department of Plant Biotechnology and BioinformaticsGhentBelgium
- VIB‐UGent Center for Plant Systems BiologyGhentBelgium
- Bioinformatics Institute GhentGhent UniversityGhentBelgium
| | - Luís Manuel Díaz
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
| | - Alberto Pizarro
- Departamento de Ciencias de la VidaUniversidad de AlcaláAlcalá de HenaresSpain
| | - José Antonio Mancha
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
| | - Lieven Sterck
- Ghent University Department of Plant Biotechnology and BioinformaticsGhentBelgium
- VIB‐UGent Center for Plant Systems BiologyGhentBelgium
- Bioinformatics Institute GhentGhent UniversityGhentBelgium
| | - David Sánchez‐Gómez
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
- Departamento de Cultivos HerbáceosCentro de Investigación Agroforestal de AlbaladejitoCuencaSpain
| | - Célia Miguel
- BioISI‐Biosystems & Integrative Sciences InstituteFaculdade de CiênciasUniversidade de LisboaLisboaPortugal
- Instituto de Biologia Experimental e Tecnológica (iBET)OeirasPortugal
| | - Carmen Collada
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
- Grupo de investigación Sistemas Naturales e Historia ForestalUPMMadridSpain
| | | | - María Teresa Cervera
- Departamento de Ecología y Genética ForestalCentro de Investigación Forestal (CIFOR)Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)MadridSpain
- Unidad Mixta de Genómica y Ecofisiología ForestalInstituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)/Universidad Politécnica de Madrid (UPM)MadridSpain
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Fernández de Simón B, Sanz M, Sánchez-Gómez D, Cadahía E, Aranda I. Rising [CO 2] effect on leaf drought-induced metabolome in Pinus pinaster Aiton: Ontogenetic- and genotypic-specific response exhibit different metabolic strategies. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 149:201-216. [PMID: 32078898 DOI: 10.1016/j.plaphy.2020.02.011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Revised: 02/10/2020] [Accepted: 02/11/2020] [Indexed: 06/10/2023]
Abstract
Rising atmospheric CO2 concentrations ([CO2]) together with water deficit can influence ecological interactions of trees through an array of chemically driven changes in plant leaves. In four drought stressed Pinus pinaster genotypes, grown under two levels of atmospheric [CO2] (ambient (aCO2) and enriched (eCO2)) the metabolome of adult and juvenile needles was analyzed to know if the metabolic responses to this environmental situation could be genotype-dependent and vary according to the stage of needle ontogeny. Drought had the highest incidence, followed by needle ontogeny, being lower the eCO2 effect. The eCO2 reduced, eliminated or countered the 50 (adult needles) - 44% (juvenile) of the drought-induced changes, suggesting that CO2-enriched plants could perceived less oxidative stress under drought, and proving that together, these two abiotic factors triggered a metabolic response different from that under single factors. Genotype drought tolerance and ontogenetic stage determined the level of metabolite accumulation and the plasticity to eCO2 under drought, which was mainly reflected in antioxidant levels and tree chemical defense. At re-watering, previously water stressed plants showed both, reduced C and N metabolism, and a "drought memory effect", favoring antioxidants and osmolyte storage. This effect showed variations regarding genotype drought-tolerance, needle ontogeny and [CO2], with remarkable contribution of terpenoids. Chemical defense and drought tolerance were somehow linked, increasing chemical defense during recovery in the most drought-sensitive individuals. The better adaptation of trees to drought under eCO2, as well as their ability to recover better from water stress, are essential for the survival of forest trees.
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Affiliation(s)
- Brígida Fernández de Simón
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de la Coruña Km 7.5, 28040, Madrid, Spain.
| | - Miriam Sanz
- School of Pharmaceutical Sciences, University of São Paulo, Bl 17 05508-900, São Paulo, SP, Brazil.
| | - David Sánchez-Gómez
- Instituto Regional de Investigación, Desarrollo Agroalimentario y Forestal de Castilla-La Mancha (IRIAF), Centro de Investigación Agroforestal de Albadalejito (CIAF), Carretera Toledo-Cuenca, km 174, 16194, Cuenca, Spain.
| | - Estrella Cadahía
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de la Coruña Km 7.5, 28040, Madrid, Spain.
| | - Ismael Aranda
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de la Coruña Km 7.5, 28040, Madrid, Spain; Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Palma de Mallorca, Islas Baleares, Spain.
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Aranda I, Cadahía E, Fernández de Simón B. Leaf ecophysiological and metabolic response in Quercus pyrenaica Willd seedlings to moderate drought under enriched CO 2 atmosphere. JOURNAL OF PLANT PHYSIOLOGY 2020; 244:153083. [PMID: 31812028 DOI: 10.1016/j.jplph.2019.153083] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Revised: 07/01/2019] [Accepted: 10/11/2019] [Indexed: 06/10/2023]
Abstract
Impact of drought under enriched CO2 atmosphere on ecophysiological and leaf metabolic response of the sub-mediterranean Q. pyrenaica oak was studied. Seedlings growing in climate chamber were submitted to moderate drought (WS) and well-watered (WW) under ambient ([CO2]amb =400 ppm) or CO2 enriched atmosphere ([CO2]enr =800 ppm). The moderate drought endured by seedlings brought about a decrease in leaf gas exchange. However, net photosynthesis (Anet) was highly stimulated for plants at [CO2]enr. There was a decrease of the stomatal conductance to water vapour (gwv) in response to drought, and a subtle trend to be lower under [CO2]enr. The consequence of these changes was an important increase in the intrinsic leaf water use efficiency (WUEi). The electron transport rate (ETR) was almost a 20 percent higher in plants at [CO2]enr regardless drought endured by seedlings. The ETR/Anet was lower under [CO2]enr, pointing to a high capacity to maintain sinks for the uptake of extra carbon in the atmosphere. Impact of drought on the leaf metabolome, as a whole, was more evident than that from [CO2] enrichment of the atmosphere. Changes in pool of non-structural carbohydrates were observed mainly as a consequence of water deficit including increases of fructose, glucose, and proto-quercitol. Most of the metabolites affected by drought back up to levels of non-stressed seedlings after rewetting (recovery phase). It can be concluded that carbon uptake was stimulated by [CO2]enr, even under the stomatal closure that accompanied moderate drought. In the last, there was a positive effect in intrinsic water use efficiency (WUEi), which was much more improved under [CO2]enr. Leaf metabolome was little responsible and some few metabolites changed mainly in response to drought, with little differences between [CO2] growth conditions.
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Affiliation(s)
- Ismael Aranda
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de A Coruña Km 7.5, 28040, Madrid, Spain; Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Palma de Mallorca, Islas Baleares, Spain.
| | - Estrella Cadahía
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de A Coruña Km 7.5, 28040, Madrid, Spain
| | - Brígida Fernández de Simón
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de A Coruña Km 7.5, 28040, Madrid, Spain
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de Simón BF, Cadahía E, Aranda I. Metabolic response to elevated CO 2 levels in Pinus pinaster Aiton needles in an ontogenetic and genotypic-dependent way. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 132:202-212. [PMID: 30216778 DOI: 10.1016/j.plaphy.2018.09.006] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Revised: 09/04/2018] [Accepted: 09/04/2018] [Indexed: 06/08/2023]
Abstract
Global climate changes involve elevated atmospheric [CO2], fostering the carbon allocation to tree sink tissues, partitioning it into metabolic pathways. We use metabolomics analysis in adult and juvenile needles of four Pinus pinaster genotypes exposed to two levels of growth [CO2]: ambient (400 μmol mol-1) and enriched (800 μmol mol-1), to know if the metabolic responses are genotype-dependent and vary according to the stage of needle ontogeny. The eCO2-induced changes in the needle metabolomes are more significant in secondary metabolism pathways and especially meaningful in juvenile needles. The heteroblasty has important consequences in the expression of the metabolome, and on the plasticity to CO2, determining the level of specific metabolite accumulation, showing an interdependence between adult and juvenile needles. The P. pinaster needle metabolomes also show clear quantitative differences linked to genotype, as well as regarding the metabolic response to eCO2, showing both, common and genotype-specific biochemical responses. Thus, the changes in flavonol levels are mainly genotype-independent, while those in terpenoid and free fatty acids are mainly genotype-dependent, ratifying the importance of genotype to determine the metabolic response to eCO2. To understand the adaptation mechanisms that tree species can develop to cope with eCO2 it is necessary to know the genetically distinct responses within a species to recognize the CO2-induced changes from the divergent approaches, what can facilitate knowing also the possible interrelation of the physiological and metabolic responses. That could explain the controversial effects of eCO2 on the carbon-based metabolite in conifers, at the inter- and intra-specific level.
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Affiliation(s)
- Brígida Fernández de Simón
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de La Coruña Km 7.5, 28040 Madrid, Spain.
| | - Estrella Cadahía
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de La Coruña Km 7.5, 28040 Madrid, Spain.
| | - Ismael Aranda
- Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, O.A., M.P. (INIA), Centro de Investigación Forestal, Carretera de La Coruña Km 7.5, 28040 Madrid, Spain; Instituto de Investigaciones Agroambientales y de Economía Del Agua (INAGEA), Palma de Mallorca, Islas Baleares, Spain.
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Shimono H, Farquhar G, Brookhouse M, Busch FA, O Grady A, Tausz M, Pinkard EA. Prescreening in large populations as a tool for identifying elevated CO 2-responsive genotypes in plants. FUNCTIONAL PLANT BIOLOGY : FPB 2018; 46:1-14. [PMID: 30939254 DOI: 10.1071/fp18087] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Accepted: 08/13/2018] [Indexed: 05/21/2023]
Abstract
Elevated atmospheric CO2 concentration (e[CO2]) can stimulate the photosynthesis and productivity of C3 species including food and forest crops. Intraspecific variation in responsiveness to e[CO2] can be exploited to increase productivity under e[CO2]. However, active selection of genotypes to increase productivity under e[CO2] is rarely performed across a wide range of germplasm, because of constraints of space and the cost of CO2 fumigation facilities. If we are to capitalise on recent advances in whole genome sequencing, approaches are required to help overcome these issues of space and cost. Here, we discuss the advantage of applying prescreening as a tool in large genome×e[CO2] experiments, where a surrogate for e[CO2] was used to select cultivars for more detailed analysis under e[CO2] conditions. We discuss why phenotypic prescreening in population-wide screening for e[CO2] responsiveness is necessary, what approaches could be used for prescreening for e[CO2] responsiveness, and how the data can be used to improve genetic selection of high-performing cultivars. We do this within the framework of understanding the strengths and limitations of genotype-phenotype mapping.
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Affiliation(s)
- Hiroyuki Shimono
- Crop Science Laboratory, Faculty of Agriculture, Iwate University, Morioka, 2032162, Japan
| | - Graham Farquhar
- Research School of Biology, Australian National University, Canberra, ACT 2600, Australia
| | - Matthew Brookhouse
- Research School of Biology, Australian National University, Canberra, ACT 2600, Australia
| | - Florian A Busch
- Research School of Biology, Australian National University, Canberra, ACT 2600, Australia
| | | | - Michael Tausz
- Birmingham Institute of Forest Research, University of Birmingham, Birmingham, 35203, UK
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