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Vandevelde JR, Yang JW, Albrecht S, Lam H, Kaufmann P, Luhmann HJ, Stüttgen MC. Layer- and cell-type-specific differences in neural activity in mouse barrel cortex during a whisker detection task. Cereb Cortex 2023; 33:1361-1382. [PMID: 35417918 DOI: 10.1093/cercor/bhac141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Revised: 03/17/2022] [Accepted: 03/18/2022] [Indexed: 11/14/2022] Open
Abstract
To address the question which neocortical layers and cell types are important for the perception of a sensory stimulus, we performed multielectrode recordings in the barrel cortex of head-fixed mice performing a single-whisker go/no-go detection task with vibrotactile stimuli of differing intensities. We found that behavioral detection probability decreased gradually over the course of each session, which was well explained by a signal detection theory-based model that posits stable psychometric sensitivity and a variable decision criterion updated after each reinforcement, reflecting decreasing motivation. Analysis of multiunit activity demonstrated highest neurometric sensitivity in layer 4, which was achieved within only 30 ms after stimulus onset. At the level of single neurons, we observed substantial heterogeneity of neurometric sensitivity within and across layers, ranging from nonresponsiveness to approaching or even exceeding psychometric sensitivity. In all cortical layers, putative inhibitory interneurons on average proffered higher neurometric sensitivity than putative excitatory neurons. In infragranular layers, neurons increasing firing rate in response to stimulation featured higher sensitivities than neurons decreasing firing rate. Offline machine-learning-based analysis of videos of behavioral sessions showed that mice performed better when not moving, which at the neuronal level, was reflected by increased stimulus-evoked firing rates.
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Affiliation(s)
- Jens R Vandevelde
- Institute of Physiology, University Medical Center of the Johannes Gutenberg University Mainz, Duesbergweg 6, 55128 Mainz, Germany.,Institute of Pathophysiology, University Medical Center of the Johannes Gutenberg University Mainz, Duesbergweg 6, 55128 Mainz, Germany
| | - Jenq-Wei Yang
- Institute of Physiology, University Medical Center of the Johannes Gutenberg University Mainz, Duesbergweg 6, 55128 Mainz, Germany
| | - Steffen Albrecht
- Institute of Physiology, University Medical Center of the Johannes Gutenberg University Mainz, Duesbergweg 6, 55128 Mainz, Germany
| | - Henry Lam
- Computational Intelligence, Faculty of Law, Management and Economics, Johannes Gutenberg University Mainz, Jakob-Welder-Weg 9, 55128 Mainz, Germany
| | - Paul Kaufmann
- Computational Intelligence, Faculty of Law, Management and Economics, Johannes Gutenberg University Mainz, Jakob-Welder-Weg 9, 55128 Mainz, Germany
| | - Heiko J Luhmann
- Institute of Physiology, University Medical Center of the Johannes Gutenberg University Mainz, Duesbergweg 6, 55128 Mainz, Germany
| | - Maik C Stüttgen
- Institute of Pathophysiology, University Medical Center of the Johannes Gutenberg University Mainz, Duesbergweg 6, 55128 Mainz, Germany
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2
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Roussel Y, Verasztó C, Rodarie D, Damart T, Reimann M, Ramaswamy S, Markram H, Keller D. Mapping of morpho-electric features to molecular identity of cortical inhibitory neurons. PLoS Comput Biol 2023; 19:e1010058. [PMID: 36602951 DOI: 10.1371/journal.pcbi.1010058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Accepted: 03/26/2022] [Indexed: 01/06/2023] Open
Abstract
Knowledge of the cell-type-specific composition of the brain is useful in order to understand the role of each cell type as part of the network. Here, we estimated the composition of the whole cortex in terms of well characterized morphological and electrophysiological inhibitory neuron types (me-types). We derived probabilistic me-type densities from an existing atlas of molecularly defined cell-type densities in the mouse cortex. We used a well-established me-type classification from rat somatosensory cortex to populate the cortex. These me-types were well characterized morphologically and electrophysiologically but they lacked molecular marker identity labels. To extrapolate this missing information, we employed an additional dataset from the Allen Institute for Brain Science containing molecular identity as well as morphological and electrophysiological data for mouse cortical neurons. We first built a latent space based on a number of comparable morphological and electrical features common to both data sources. We then identified 19 morpho-electrical clusters that merged neurons from both datasets while being molecularly homogeneous. The resulting clusters best mirror the molecular identity classification solely using available morpho-electrical features. Finally, we stochastically assigned a molecular identity to a me-type neuron based on the latent space cluster it was assigned to. The resulting mapping was used to derive inhibitory me-types densities in the cortex.
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Affiliation(s)
- Yann Roussel
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Csaba Verasztó
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Dimitri Rodarie
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Tanguy Damart
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Michael Reimann
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Srikanth Ramaswamy
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Henry Markram
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
| | - Daniel Keller
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Geneva, Switzerland
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3
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Apicella AJ, Marchionni I. VIP-Expressing GABAergic Neurons: Disinhibitory vs. Inhibitory Motif and Its Role in Communication Across Neocortical Areas. Front Cell Neurosci 2022; 16:811484. [PMID: 35221922 PMCID: PMC8867699 DOI: 10.3389/fncel.2022.811484] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Accepted: 01/04/2022] [Indexed: 11/13/2022] Open
Abstract
GABAergic neurons play a crucial role in shaping cortical activity. Even though GABAergic neurons constitute a small fraction of cortical neurons, their peculiar morphology and functional properties make them an intriguing and challenging task to study. Here, we review the basic anatomical features, the circuit properties, and the possible role in the relevant behavioral task of a subclass of GABAergic neurons that express vasoactive intestinal polypeptide (VIP). These studies were performed using transgenic mice in which the VIP-expressing neurons can be recognized using fluorescent proteins and optogenetic manipulation to control (or regulate) their electrical activity. Cortical VIP-expressing neurons are more abundant in superficial cortical layers than other cortical layers, where they are mainly studied. Optogenetic and paired recordings performed in ex vivo cortical preparations show that VIP-expressing neurons mainly exert their inhibitory effect onto somatostatin-expressing (SOM) inhibitory neurons, leading to a disinhibitory effect onto excitatory pyramidal neurons. However, this subclass of GABAergic neurons also releases neurotransmitters onto other GABAergic and non-GABAergic neurons, suggesting other possible circuit roles than a disinhibitory effect. The heterogeneity of VIP-expressing neurons also suggests their involvement and recruitment during different functions via the inhibition/disinhibition of GABAergic and non-GABAergic neurons locally and distally, depending on the specific local circuit in which they are embedded, with potential effects on the behavioral states of the animal. Although VIP-expressing neurons represent only a tiny fraction of GABAergic inhibitory neurons in the cortex, these neurons’ selective activation/inactivation could produce a relevant behavioral effect in the animal. Regardless of the increasing finding and discoveries on this subclass of GABAergic neurons, there is still a lot of missing information, and more studies should be done to unveil their role at the circuit and behavior level in different cortical layers and across different neocortical areas.
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Affiliation(s)
- Alfonso Junior Apicella
- Department of Biology, Neurosciences Institute, University of Texas at San Antonio, San Antonio, TX, United States
| | - Ivan Marchionni
- Department of Biomedical Sciences, University of Padova, Padua, Italy.,Padova Neuroscience Center (PNC), University of Padova, Padua, Italy
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4
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Qi G, Feldmeyer D. Cell-Type Specific Neuromodulation of Excitatory and Inhibitory Neurons via Muscarinic Acetylcholine Receptors in Layer 4 of Rat Barrel Cortex. Front Neural Circuits 2022; 16:843025. [PMID: 35250496 PMCID: PMC8894850 DOI: 10.3389/fncir.2022.843025] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Accepted: 01/27/2022] [Indexed: 11/25/2022] Open
Abstract
The neuromodulator acetylcholine (ACh) plays an important role in arousal, attention, vigilance, learning and memory. ACh is released during different behavioural states and affects the brain microcircuit by regulating neuronal and synaptic properties. Here, we investigated how a low concentration of ACh (30 μM) affects the intrinsic properties of electrophysiologically and morphologically identified excitatory and inhibitory neurons in layer 4 (L4) of rat barrel cortex. ACh altered the membrane potential of L4 neurons in a heterogeneous manner. Nearly all L4 regular spiking (RS) excitatory neurons responded to bath-application of ACh with a M4 muscarinic ACh receptor-mediated hyperpolarisation. In contrast, in the majority of L4 fast spiking (FS) and non-fast spiking (nFS) interneurons 30 μM ACh induced a depolarisation while the remainder showed a hyperpolarisation or no response. The ACh-induced depolarisation of L4 FS interneurons was much weaker than that in L4 nFS interneurons. There was no clear difference in the response to ACh for three morphological subtypes of L4 FS interneurons. However, in four morpho-electrophysiological subtypes of L4 nFS interneurons, VIP+-like interneurons showed the strongest ACh-induced depolarisation; occasionally, even action potential firing was elicited. The ACh-induced depolarisation in L4 FS interneurons was exclusively mediated by M1 muscarinic ACh receptors; in L4 nFS interneurons it was mainly mediated by M1 and/or M3/5 muscarinic ACh receptors. In a subset of L4 nFS interneurons, a co-operative activation of muscarinic and nicotinic ACh receptors was also observed. The present study demonstrates that low-concentrations of ACh affect different L4 neuron types in a cell-type specific way. These effects result from a specific expression of different muscarinic and/or nicotinic ACh receptors on the somatodendritic compartments of L4 neurons. This suggests that even at low concentrations ACh may tune the excitability of L4 excitatory and inhibitory neurons and their synaptic microcircuits differentially depending on the behavioural state during which ACh is released.
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Affiliation(s)
- Guanxiao Qi
- Institute of Neuroscience and Medicine, INM-10, Reseach Centre Jülich, Jülich, Germany
- *Correspondence: Guanxiao Qi,
| | - Dirk Feldmeyer
- Institute of Neuroscience and Medicine, INM-10, Reseach Centre Jülich, Jülich, Germany
- Department of Psychiatry, Psychotherapy and Psychosomatics, RWTH Aachen University, Aachen, Germany
- Jülich-Aachen Research Alliance-Brain, Translational Brain Medicine, Aachen, Germany
- Dirk Feldmeyer,
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5
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Yamamoto K, Nakaya Y, Sugawara S, Kobayashi M. Synchronous inhibitory synaptic inputs to layer II/III pyramidal neurons in the murine barrel cortex. Brain Res 2021; 1773:147686. [PMID: 34637762 DOI: 10.1016/j.brainres.2021.147686] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 09/15/2021] [Accepted: 10/05/2021] [Indexed: 11/24/2022]
Abstract
The barrel cortex exhibits obvious columnar organization. Although GABAergic inhibition plays a critical role in regulating neural excitation in response to mechanical stimuli applied to whiskers, the profiles of synchronous events for inhibitory synaptic transmission in intracolumnar and transcolumnar pyramidal neurons remain unknown. To explore a functional mechanism of synchronous inhibition of pyramidal neurons, we performed paired whole-cell patch-clamp recordings and recorded spontaneous inhibitory postsynaptic currents (sIPSCs) from layer II/III pyramidal neurons. A cross-correlogram of sIPSCs (1 ms bin) was used to detect synchronous sIPSCs. Synchronous neuron pairs were defined as those whose peak number of sIPSCs between -3 and 3 ms exceeded the mean + 2 SD of the number of sIPSCs in the period of -50 to 50 ms minus the number in that of -3 to 3 ms period. In the recording of pyramidal neurons located in the same column (intracolumn), 61.5% of neuron pairs were classified as synchronous neuron pairs, while 52.6% of pyramidal neuron pairs in adjacent columns (transcolumn) were defined as synchronous neuron pairs. The amplitude of synchronous sIPSCs was comparable to that of asynchronous sIPSCs in asynchronous neuron pairs, whereas that of synchronous sIPSCs was larger than that of asynchronous sIPSCs in synchronous neuron pairs. Synchronicity of sIPSCs did not depend on the distance of neuron pairs. These results suggest that layer II/III pyramidal neurons receive synchronous inhibitory synaptic inputs generated by a certain type of GABAergic interneuron that induces large IPSCs in pyramidal neurons, likely to be fast-spiking cells.
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Affiliation(s)
- Kiyofumi Yamamoto
- Department of Pharmacology, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan; Division of Oral and Craniomaxillofacial Research, Dental Research Center, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan
| | - Yuka Nakaya
- Department of Pharmacology, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan; Division of Oral and Craniomaxillofacial Research, Dental Research Center, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan
| | - Shiori Sugawara
- Department of Pharmacology, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan; Division of Oral and Craniomaxillofacial Research, Dental Research Center, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan
| | - Masayuki Kobayashi
- Department of Pharmacology, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan; Division of Oral and Craniomaxillofacial Research, Dental Research Center, Nihon University School of Dentistry, 1-8-13 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8310, Japan.
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6
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Feng XY, Hu HD, Chen J, Long C, Yang L, Wang L. Acute neuroinflammation increases excitability of prefrontal parvalbumin interneurons and their functional recruitment during novel object recognition. Brain Behav Immun 2021; 98:48-58. [PMID: 34403738 DOI: 10.1016/j.bbi.2021.08.216] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Revised: 08/07/2021] [Accepted: 08/09/2021] [Indexed: 01/09/2023] Open
Abstract
There is an emerging body of literature suggesting that unlike the chronic neuroinflammatory response, acute neuroinflammation is self-regulated and is beneficial for central nervous system homeostasis and cognitive integrity. However, the neurophysiological alterations upon acute neuroinflammation and their implications on cognitive function remain poorly understood. In the present study, we reliably established a mouse model of acute and self-limiting neuroinflammation by administering a single intraperitoneal injection of low-dose lipopolysaccharide, which induced reversible sickness behavior and increased pro-inflammatory cytokine expression in the medial prefrontal cortex (mPFC). During acute neuroinflammation, fast-spiking parvalbumin-expressing interneurons (PV interneurons) in the mPFC exhibited a hyperexcitable phenotype exemplified by increased input resistance, decreased rheobase current, and a higher frequency of action potentials. Furthermore, PV interneurons in the prelimbic subregion of the mPFC were excessively recruited into circuits supporting novel object recognition memory, which remained intact after acute neuroinflammation. Together, our findings suggest that alterations in PV neuronal excitability resulting from acute neuroinflammation may mediate neuronal recruitment and confer a beneficial outcome on functional integrity of NOR circuit in the mPFC.
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Affiliation(s)
- Xiao-Yi Feng
- Precise Genome Engineering Center, School of Life Sciences, Guangzhou University, Guangzhou 510006, PR China
| | - Hai-Dong Hu
- School of Life Sciences, South China Normal University, Guangzhou 510631, PR China
| | - Jian Chen
- School of Life Sciences, South China Normal University, Guangzhou 510631, PR China
| | - Cheng Long
- School of Life Sciences, South China Normal University, Guangzhou 510631, PR China
| | - Li Yang
- Precise Genome Engineering Center, School of Life Sciences, Guangzhou University, Guangzhou 510006, PR China.
| | - Lei Wang
- Precise Genome Engineering Center, School of Life Sciences, Guangzhou University, Guangzhou 510006, PR China.
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7
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Yang D, Qi G, Ding C, Feldmeyer D. Layer 6A Pyramidal Cell Subtypes Form Synaptic Microcircuits with Distinct Functional and Structural Properties. Cereb Cortex 2021; 32:2095-2111. [PMID: 34628499 PMCID: PMC9113278 DOI: 10.1093/cercor/bhab340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Revised: 08/03/2021] [Accepted: 08/25/2021] [Indexed: 11/27/2022] Open
Abstract
Neocortical layer 6 plays a crucial role in sensorimotor co-ordination and integration through functionally segregated circuits linking intracortical and subcortical areas. We performed whole-cell recordings combined with morphological reconstructions to identify morpho-electric types of layer 6A pyramidal cells (PCs) in rat barrel cortex. Cortico-thalamic (CT), cortico-cortical (CC), and cortico-claustral (CCla) PCs were classified based on their distinct morphologies and have been shown to exhibit different electrophysiological properties. We demonstrate that these three types of layer 6A PCs innervate neighboring excitatory neurons with distinct synaptic properties: CT PCs establish weak facilitating synapses onto other L6A PCs; CC PCs form synapses of moderate efficacy, while synapses made by putative CCla PCs display the highest release probability and a marked short-term depression. For excitatory-inhibitory synaptic connections in layer 6, both the presynaptic PC type and the postsynaptic interneuron type govern the dynamic properties of the respective synaptic connections. We have identified a functional division of local layer 6A excitatory microcircuits which may be responsible for the differential temporal engagement of layer 6 feed-forward and feedback networks. Our results provide a basis for further investigations on the long-range CC, CT, and CCla pathways.
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Affiliation(s)
- Danqing Yang
- Research Center Juelich, Institute of Neuroscience and Medicine 10, 52425 Juelich, Germany
| | - Guanxiao Qi
- Research Center Juelich, Institute of Neuroscience and Medicine 10, 52425 Juelich, Germany
| | - Chao Ding
- Research Center Juelich, Institute of Neuroscience and Medicine 10, 52425 Juelich, Germany
| | - Dirk Feldmeyer
- Research Center Juelich, Institute of Neuroscience and Medicine 10, 52425 Juelich, Germany.,RWTH Aachen University Hospital, Dept of Psychiatry, Psychotherapy, and Psychosomatics, 52074 Aachen, Germany.,Jülich-Aachen Research Alliance, Translational Brain Medicine (JARA Brain), Aachen, Germany
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8
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Ding C, Emmenegger V, Schaffrath K, Feldmeyer D. Layer-Specific Inhibitory Microcircuits of Layer 6 Interneurons in Rat Prefrontal Cortex. Cereb Cortex 2021; 31:32-47. [PMID: 32829414 PMCID: PMC7727376 DOI: 10.1093/cercor/bhaa201] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Revised: 06/06/2020] [Accepted: 07/02/2020] [Indexed: 12/15/2022] Open
Abstract
GABAergic interneurons in different cortical areas play important roles in diverse higher-order cognitive functions. The heterogeneity of interneurons is well characterized in different sensory cortices, in particular in primary somatosensory and visual cortex. However, the structural and functional properties of the medial prefrontal cortex (mPFC) interneurons have received less attention. In this study, a cluster analysis based on axonal projection patterns revealed four distinct clusters of L6 interneurons in rat mPFC: Cluster 1 interneurons showed axonal projections similar to Martinotti-like cells extending to layer 1, cluster 2 displayed translaminar projections mostly to layer 5, and cluster 3 interneuron axons were confined to the layer 6, whereas those of cluster 4 interneurons extend also into the white matter. Correlations were found between neuron location and axonal distribution in all clusters. Moreover, all cluster 1 L6 interneurons showed a monotonically adapting firing pattern with an initial high-frequency burst. All cluster 2 interneurons were fast-spiking, while neurons in cluster 3 and 4 showed heterogeneous firing patterns. Our data suggest that L6 interneurons that have distinct morphological and physiological characteristics are likely to innervate different targets in mPFC and thus play differential roles in the L6 microcircuitry and in mPFC-associated functions.
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Affiliation(s)
- Chao Ding
- Institute of Neuroscience and Medicine, INM-10 Function of Cortical Microcircuits Group, Research Centre Jülich, 52425 Jülich, Germany
| | - Vishalini Emmenegger
- Institute of Neuroscience and Medicine, INM-10 Function of Cortical Microcircuits Group, Research Centre Jülich, 52425 Jülich, Germany
- Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland
| | - Kim Schaffrath
- Institute of Neuroscience and Medicine, INM-10 Function of Cortical Microcircuits Group, Research Centre Jülich, 52425 Jülich, Germany
- Department of Ophthalmology, RWTH Aachen University Hospital, Medical School, 52074 Aachen, Germany
| | - Dirk Feldmeyer
- Institute of Neuroscience and Medicine, INM-10 Function of Cortical Microcircuits Group, Research Centre Jülich, 52425 Jülich, Germany
- Department of Psychiatry, Psychotherapy and Psychosomatics, Medical School, RWTH Aachen University Hospital, 52074 Aachen, Germany
- JARA-Translational Brain Medicine, 52074 Aachen, Germany
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9
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Shrestha S, Anderson NC, Grabel LB, Naegele JR, Aaron GB. Development of electrophysiological and morphological properties of human embryonic stem cell-derived GABAergic interneurons at different times after transplantation into the mouse hippocampus. PLoS One 2020; 15:e0237426. [PMID: 32813731 PMCID: PMC7444508 DOI: 10.1371/journal.pone.0237426] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2019] [Accepted: 07/27/2020] [Indexed: 12/16/2022] Open
Abstract
Transplantation of human embryonic stem cell (hESC)-derived neural progenitors is a potential treatment for neurological disorders, but relatively little is known about the time course for human neuron maturation after transplantation and the emergence of morphological and electrophysiological properties. To address this gap, we transplanted hESC-derived human GABAergic interneuron progenitors into the mouse hippocampus, and then characterized their electrophysiological properties and dendritic arborizations after transplantation by means of ex vivo whole-cell patch clamp recording, followed by biocytin staining, confocal imaging and neuron reconstruction software. We asked whether particular electrophysiological and morphological properties showed maturation-dependent changes after transplantation. We also investigated whether the emergence of particular electrophysiological properties were linked to increased complexity of the dendritic arbors. Human neurons were classified into five distinct neuronal types (Type I-V), ranging from immature to mature fast-spiking interneurons. Hierarchical clustering of the dendritic morphology and Sholl analyses suggested four morphologically distinct classes (Class A-D), ranging from simple/immature to highly complex. Incorporating all of our data regardless of neuronal classification, we investigated whether any electrophysiological and morphological features correlated with time post-transplantation. This analysis demonstrated that both dendritic arbors and electrophysiological properties matured after transplantation.
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Affiliation(s)
- Swechhya Shrestha
- Department of Biology, Wesleyan University, Middletown, Connecticut, United States of America
- * E-mail:
| | - Nickesha C. Anderson
- Department of Biology, Wesleyan University, Middletown, Connecticut, United States of America
| | - Laura B. Grabel
- Department of Biology, Wesleyan University, Middletown, Connecticut, United States of America
| | - Janice R. Naegele
- Department of Biology, Wesleyan University, Middletown, Connecticut, United States of America
- Program in Neuroscience and Behavior, Wesleyan University, Middletown, Connecticut, United States of America
| | - Gloster B. Aaron
- Department of Biology, Wesleyan University, Middletown, Connecticut, United States of America
- Program in Neuroscience and Behavior, Wesleyan University, Middletown, Connecticut, United States of America
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10
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Grein S, Qi G, Queisser G. Density Visualization Pipeline: A Tool for Cellular and Network Density Visualization and Analysis. Front Comput Neurosci 2020; 14:42. [PMID: 32676020 PMCID: PMC7333680 DOI: 10.3389/fncom.2020.00042] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 04/17/2020] [Indexed: 12/02/2022] Open
Abstract
Neuron classification is an important component in analyzing network structure and quantifying the effect of neuron topology on signal processing. Current quantification and classification approaches rely on morphology projection onto lower-dimensional spaces. In this paper a 3D visualization and quantification tool is presented. The Density Visualization Pipeline (DVP) computes, visualizes and quantifies the density distribution, i.e., the "mass" of interneurons. We use the DVP to characterize and classify a set of GABAergic interneurons. Classification of GABAergic interneurons is of crucial importance to understand on the one hand their various functions and on the other hand their ubiquitous appearance in the neocortex. 3D density map visualization and projection to the one-dimensional x, y, z subspaces show a clear distinction between the studied cells, based on these metrics. The DVP can be coupled to computational studies of the behavior of neurons and networks, in which network topology information is derived from DVP information. The DVP reads common neuromorphological file formats, e.g., Neurolucida XML files, NeuroMorpho.org SWC files and plain ASCII files. Full 3D visualization and projections of the density to 1D and 2D manifolds are supported by the DVP. All routines are embedded within the visual programming IDE VRL-Studio for Java which allows the definition and rapid modification of analysis workflows.
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Affiliation(s)
- Stephan Grein
- Department of Mathematics, Temple University, Philadelphia, PA, United States
| | - Guanxiao Qi
- Institute of Neuroscience and Medicine (INM-10), Research Centre Jülich, Jülich, Germany
| | - Gillian Queisser
- Department of Mathematics, Temple University, Philadelphia, PA, United States
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11
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Ofer N, Shefi O, Yaari G. Axonal Tree Morphology and Signal Propagation Dynamics Improve Interneuron Classification. Neuroinformatics 2020; 18:581-590. [PMID: 32346847 DOI: 10.1007/s12021-020-09466-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Neurons are diverse and can be differentiated by their morphological, electrophysiological, and molecular properties. Current morphology-based classification approaches largely rely on the dendritic tree structure or on the overall axonal projection layout. Here, we use data from public databases of neuronal reconstructions and membrane properties to study the characteristics of the axonal and dendritic trees for interneuron classification. We show that combining signal propagation patterns observed by biophysical simulations of the activity along ramified axonal trees with morphological parameters of the axonal and dendritic trees, significantly improve classification results compared to previous approaches. The classification schemes introduced here can be utilized for robust neuronal classification. Our work paves the way for understanding and utilizing form-function principles in realistic neuronal reconstructions.
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Affiliation(s)
- Netanel Ofer
- Faculty of Engineering, Bar Ilan University, Ramat Gan, 5290002, Israel.,Bar Ilan Institute of Nanotechnologies and Advanced Materials, Bar Ilan University, Ramat Gan, 5290002, Israel
| | - Orit Shefi
- Faculty of Engineering, Bar Ilan University, Ramat Gan, 5290002, Israel. .,Bar Ilan Institute of Nanotechnologies and Advanced Materials, Bar Ilan University, Ramat Gan, 5290002, Israel.
| | - Gur Yaari
- Faculty of Engineering, Bar Ilan University, Ramat Gan, 5290002, Israel.
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12
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Qi G, Yang D, Ding C, Feldmeyer D. Unveiling the Synaptic Function and Structure Using Paired Recordings From Synaptically Coupled Neurons. Front Synaptic Neurosci 2020; 12:5. [PMID: 32116641 PMCID: PMC7026682 DOI: 10.3389/fnsyn.2020.00005] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Accepted: 01/22/2020] [Indexed: 11/24/2022] Open
Abstract
Synaptic transmission between neurons is the basic mechanism for information processing in cortical microcircuits. To date, paired recording from synaptically coupled neurons is the most widely used method which allows a detailed functional characterization of unitary synaptic transmission at the cellular and synaptic level in combination with a structural characterization of both pre- and postsynaptic neurons at the light and electron microscopic level. In this review, we will summarize the many applications of paired recordings to investigate synaptic function and structure. Paired recordings have been used to study the detailed electrophysiological and anatomical properties of synaptically coupled cell pairs within a synaptic microcircuit; this is critical in order to understand the connectivity rules and dynamic properties of synaptic transmission. Paired recordings can also be adopted for quantal analysis of an identified synaptic connection and to study the regulation of synaptic transmission by neuromodulators such as acetylcholine, the monoamines, neuropeptides, and adenosine etc. Taken together, paired recordings from synaptically coupled neurons will remain a very useful approach for a detailed characterization of synaptic transmission not only in the rodent brain but also that of other species including humans.
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Affiliation(s)
- Guanxiao Qi
- Institute of Neuroscience and Medicine, INM-10, Jülich Research Centre, Jülich, Germany
| | - Danqing Yang
- Institute of Neuroscience and Medicine, INM-10, Jülich Research Centre, Jülich, Germany
| | - Chao Ding
- Institute of Neuroscience and Medicine, INM-10, Jülich Research Centre, Jülich, Germany
| | - Dirk Feldmeyer
- Institute of Neuroscience and Medicine, INM-10, Jülich Research Centre, Jülich, Germany.,Department of Psychiatry, Psychotherapy and Psychosomatics, RWTH Aachen University Hospital, Aachen, Germany.,Jülich-Aachen Research Alliance, Translational Brain Medicine (JARA Brain), Aachen, Germany
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13
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Scala F, Kobak D, Shan S, Bernaerts Y, Laturnus S, Cadwell CR, Hartmanis L, Froudarakis E, Castro JR, Tan ZH, Papadopoulos S, Patel SS, Sandberg R, Berens P, Jiang X, Tolias AS. Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas. Nat Commun 2019; 10:4174. [PMID: 31519874 PMCID: PMC6744474 DOI: 10.1038/s41467-019-12058-z] [Citation(s) in RCA: 64] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Accepted: 08/06/2019] [Indexed: 01/13/2023] Open
Abstract
Layer 4 (L4) of mammalian neocortex plays a crucial role in cortical information processing, yet a complete census of its cell types and connectivity remains elusive. Using whole-cell recordings with morphological recovery, we identified one major excitatory and seven inhibitory types of neurons in L4 of adult mouse visual cortex (V1). Nearly all excitatory neurons were pyramidal and all somatostatin-positive (SOM+) non-fast-spiking interneurons were Martinotti cells. In contrast, in somatosensory cortex (S1), excitatory neurons were mostly stellate and SOM+ interneurons were non-Martinotti. These morphologically distinct SOM+ interneurons corresponded to different transcriptomic cell types and were differentially integrated into the local circuit with only S1 neurons receiving local excitatory input. We propose that cell type specific circuit motifs, such as the Martinotti/pyramidal and non-Martinotti/stellate pairs, are used across the cortex as building blocks to assemble cortical circuits.
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Affiliation(s)
- Federico Scala
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Dmitry Kobak
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
| | - Shen Shan
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Yves Bernaerts
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
| | - Sophie Laturnus
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
| | - Cathryn Rene Cadwell
- Department of Anatomic Pathology, University of California San Francisco, San Francisco, CA, USA
| | - Leonard Hartmanis
- Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden
| | - Emmanouil Froudarakis
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Jesus Ramon Castro
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Zheng Huan Tan
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Stelios Papadopoulos
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Saumil Surendra Patel
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Rickard Sandberg
- Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Department of Computer Science, University of Tübingen, Tübingen, Germany
| | - Xiaolong Jiang
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
- Jan and Dan Duncan Neurological Research Institute at Texas Children's Hospital, Houston, TX, USA.
| | - Andreas Savas Tolias
- Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, TX, USA.
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
- Department of Electrical and Computational Engineering, Rice University, Houston, TX, USA.
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14
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Alternative classifications of neurons based on physiological properties and synaptic responses, a computational study. Sci Rep 2019; 9:13096. [PMID: 31511545 PMCID: PMC6739481 DOI: 10.1038/s41598-019-49197-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2019] [Accepted: 08/16/2019] [Indexed: 01/25/2023] Open
Abstract
One of the central goals of today's neuroscience is to achieve the conceivably most accurate classification of neuron types in the mammalian brain. As part of this research effort, electrophysiologists commonly utilize current clamp techniques to gain a detailed characterization of the neurons' physiological properties. While this approach has been useful, it is not well understood whether neurons that share physiological properties of a particular phenotype would also operate consistently under the action of natural synaptic inputs. We approached this problem by simulating a biophysically diverse population of model neurons based on 3 generic phenotypes. We exposed the model neurons to two types of stimulation to investigate their voltage responses under conventional current step protocols and under simulated synaptic bombardment. We extracted standard physiological parameters from the voltage responses elicited by current step stimulation and spike arrival times descriptive of the model's firing behavior under synaptic inputs. The biophysical phenotypes could be reliably identified using classification based on the 'static' physiological properties, but not the interspike interval-based parameters. However, the model neurons associated with the biophysically different phenotypes retained cell type specific features in the fine structure of their spike responses that allowed their accurate classification.
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15
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Zhou X, Mansori I, Fischer T, Witte M, Staiger JF. Characterizing the morphology of somatostatin-expressing interneurons and their synaptic innervation pattern in the barrel cortex of the GFP-expressing inhibitory neurons mouse. J Comp Neurol 2019; 528:244-260. [PMID: 31407339 DOI: 10.1002/cne.24756] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2019] [Revised: 07/25/2019] [Accepted: 07/25/2019] [Indexed: 12/30/2022]
Abstract
Somatostatin-expressing (SST+) cells form the second largest subpopulation of neocortical GABAergic neurons that contain diverse subtypes, which participate in layer-specific cortical circuits. Martinotti cells, as the most abundant subtype of SST+ interneurons, are mainly located in layers II/III and V/VI, and are characterized by dense axonal arborizations in layer I. GFP-expressing inhibitory neurons (GIN), representing a fraction of mainly upper layer SST+ interneurons in various cortical areas, were recently claimed to include both Martinotti cells and non-Martinotti cells. This makes it necessary to examine in detail the morphology and synaptic innervation pattern of the GIN cells, in order to better predict their functional implications. In our study, we characterized the neurochemical specificity, somatodendritic morphology, synaptic ultrastructure as well as synaptic innervation pattern of GIN cells in the barrel cortex in a layer-specific manner. We showed that GIN cells account for 44% of the SST+ interneurons in layer II/III and around 35% in layers IV and Va. There are 29% of GIN cells coexpressing calretinin with 54% in layer II/III, 8% in layer IV, and 13% in layer V. They have diverse somatodendritic configurations and form relatively small synapses across all examined layers. They almost exclusively innervate dendrites of excitatory cells, preferentially targeting distal apical dendrites and apical dendritic tufts of pyramidal neurons in layer I, and rarely target other inhibitory neurons. In summary, our study reveals unique features in terms of the morphology and output of GIN cells, which can help to better understand their diversity and structure-function relationships.
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Affiliation(s)
- Xiaojuan Zhou
- Institute for Neuroanatomy, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany
| | - Ima Mansori
- Institute for Neuroanatomy, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany
| | - Tatjana Fischer
- Institute for Neuroanatomy, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany
| | - Mirko Witte
- Institute for Neuroanatomy, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany
| | - Jochen F Staiger
- Institute for Neuroanatomy, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany
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Riedemann T, Straub T, Sutor B. Two types of somatostatin-expressing GABAergic interneurons in the superficial layers of the mouse cingulate cortex. PLoS One 2018; 13:e0200567. [PMID: 30001424 PMCID: PMC6042774 DOI: 10.1371/journal.pone.0200567] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Accepted: 06/28/2018] [Indexed: 11/21/2022] Open
Abstract
Somatostatin-expressing (SOM+), inhibitory interneurons represent a heterogeneous group of cells and given their remarkable diversity, classification of SOM+ interneurons remains a challenging task. Electrophysiological, morphological and neurochemical classes of SOM+ interneurons have been proposed in the past but it remains unclear as to what extent these classes are congruent. We performed whole-cell patch-clamp recordings from 127 GFP-labeled SOM+ interneurons ('GIN') of the superficial cingulate cortex with subsequent biocytin-filling and immunocytochemical labeling. Principal component analysis followed by k-means clustering predicted two putative subtypes of SOM+ interneurons, which we designated as group I and group II GIN. A key finding of our study is the fact that these electrophysiologically and morphologically distinct groups of SOM+ interneurons can be correlated with two neurochemical subtypes of SOM+ interneurons described recently in our laboratory. In particular, all SOM+ interneurons expressing calbindin but no calretinin could be classified as group I GIN, whereas all but one neuropeptide Y- and calretinin-positive interneurons were found in group II.
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Affiliation(s)
- Therese Riedemann
- Ludwig-Maximilians-University, Biomedical Center, Physiological Genomics, Munich, Germany
- * E-mail:
| | - Tobias Straub
- Ludwig-Maximilians-University, Biomedical Center, Core Facility Bioinformatics, Munich, Germany
| | - Bernd Sutor
- Ludwig-Maximilians-University, Biomedical Center, Physiological Genomics, Munich, Germany
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