Biomonitors of atmospheric nitrogen deposition: potential uses and limitations

Biomonitoring of dairy farm emitted ammonia in surface waters using phytoplankton and periphyton

The increasing environmental abundance of reactive N ('Nr') entails many adverse effects for society such as soil degradation and eutrophication. In addressing the global surplus of N, there is a pressing need to quantify local sources and dynamics of Nr. Although quantified as an important anthropogenic source of Nr, the spatiotemporal patterns of ammonia ('NH3') emitted by dairy farming and its resulting pressure on local surface waters lacks quantification. Quantification could optimize farm management with minimized losses of valuable nitrogen and protection of freshwater ecology. This study aimed to unravel spatiotemporal dynamics of ammonia nitrogen emitted by a dairy farm in the atmospheric and aquatic geo-ecosphere. Atmospheric NH3 and aqueous ammonium ('NH4+') were determined over time, together with meteorological variables. Aquatic biomonitors (periphyton and phytoplankton) were employed to monitor the spatial impacts of cattle-stable emitted NH3. Atmospheric NH3 on the farm was significantly regulated by wind, sharply declining over increasing distances from the stable (average decrease in the dominant wind direction from 55.5 μg/m3 at 20 m to 5.8 μg/m3 at 500 m, in the other wind directions values decreased from 38.3 μg/m3 to 6.0 μg/m3). This was also reflected in local surface water concentrations of NH4+, with average concentrations decreasing from 37.0 mg [NH4+-N]/L at 65 m to 4.8 mg [NH4+-N]/L in the dominant wind direction, and from 1.2 to 0.7 in other directions. Periphyton biomass, total N ("TN") and δ15N all significantly reflected spatiotemporal dynamics of atmospheric NH3 and aqueous NH4+, as did phytoplankton TN. The cattle stable significantly influenced local water quality through atmospheric spreading of NH3, and both aquatic biomonitors were influenced by and reflected dairy farm emitted NH3 with a sharp dilution over distance. This study strongly underlines the importance of atmospheric transport of dairy farm emitted NH3 and its effects on local water quality.

Treatment by enhanced denitrification of forecasted nitrate concentrations under different climate change scenarios

Climate change has a decisive influence on future water resources and, consequently, on future nitrate (NO3-) concentrations. Due to decreasing water resources, in addition to decreasing and finite NO3- degradation capacities of the aquifers, higher NO3- concentrations are expected in the future. Likewise, NO3- pollution is expected to become more frequent. However, enhanced denitrification by addition of organic carbon (C) as an electron donor is a promising treatment method. This study describes the first model using NO3- projections based on climate projections, combined with the treatment method of enhanced denitrification. The exemplary study area is the Lodshof water catchment which is located in the Lower Rhine Embayment. The model illustrates the considerable potential of enhanced denitrification as an effective treatment. The expected increase in NO3- concentrations by the end of the 21st century, resulting from climate chance and a decreasing water resource, can be reduced by 38-58% in this model. In all projections, the limit value of 50 mg/L can be complied by this treatment. A projection with 20% lower NO3- input and the described treatment highlights the effectivity of combining measures to be able to manage the NO3- problem. Furthermore, this publication critically discusses the transfer of denitrification rates from laboratory experiments to the field scale and finally into models like this.

Stable isotope approaches and opportunities for improving plant conservation

Successful conservation of threatened species and ecosystems in a rapidly changing world requires scientifically sound decision-making tools that are readily accessible to conservation practitioners. Physiological applications that examine how plants and animals interact with their environment are now widely used when planning, implementing and monitoring conservation. Among these tools, stable-isotope physiology is a potentially powerful, yet under-utilized cornerstone of current and future conservation efforts of threatened and endangered plants. We review the underlying concepts and theory of stable-isotope physiology and describe how stable-isotope applications can support plant conservation. We focus on stable isotopes of carbon, hydrogen, oxygen and nitrogen to address plant ecophysiological responses to changing environmental conditions across temporal scales from hours to centuries. We review examples from a broad range of plant taxa, life forms and habitats and provide specific examples where stable-isotope analysis can directly improve conservation, in part by helping identify resilient, locally adapted genotypes or populations. Our review aims to provide a guide for practitioners to easily access and evaluate the information that can be derived from stable-isotope signatures, their limitations and how stable isotopes can improve conservation efforts.

Effects of Strigolactone on Torreya grandis Gene Expression and Soil Microbial Community Structure Under Simulated Nitrogen Deposition

Nitrogen enters the terrestrial ecosystem through deposition. High nitrogen levels can affect physical and chemical properties of soil and inhibit normal growth and reproduction of forest plants. Nitrogen modulates the composition of soil microorganisms. Strigolactones inhibits plant branching, promotes root growth, nutrient absorption, and promotes arbuscular fungal mycelia branching. Plants are subjected to increasing atmospheric nitrogen deposition. Therefore, it is imperative to explore the relationship between strigolactone and nitrogen deposition of plants and abundance of soil microorganisms. In the present study, the effects of strigolactone on genetic responses and soil microorganisms of Torreya grandis, under simulated nitrogen deposition were explored using high-throughput sequencing techniques. T. grandis is a subtropical economic tree species in China. A total of 4,008 differentially expressed genes were identified in additional N deposition and GR24 treatment. These genes were associated with multiple GO terms and metabolic pathways. GO enrichment analysis showed that several DEGs were associated with enrichment of the transporter activity term. Both additional nitrogen deposition and GR24 treatment modulated the content of nutrient elements. The content of K reduced in leaves after additional N deposition treatment. The content of P increased in leaves after GR24 treatment. A total of 20 families and 29 DEGs associated with transporters were identified. These transporters may be regulated by transcription factors. A total of 1,402,819 clean reads and 1,778 amplicon sequence variants (ASVs) were generated through Bacterial 16S rRNA sequencing. Random forest classification revealed that Legionella, Lacunisphaera, Klebsiella, Bryobacter, and Janthinobacterium were significantly enriched in the soil in the additional N deposition group and the GR24 treatment group. Co-occurrence network analysis showed significant differences in composition of soil microbial community under different treatments. These results indicate a relationship between N deposition and strigolactones effect. The results provide new insights on the role of strigolactones in plants and composition of soil microorganisms under nitrogen deposition.

Better together: Cross-tolerance induced by warm acclimation and nitrate exposure improved the aerobic capacity and stress tolerance of common carp Cyprinus carpio

Climate warming is a threat of imminent concern that may exacerbate the impact of nitrate pollution on fish fitness. These stressors can individually affect the aerobic capacity and stress tolerance of fish. In combination, they may interact in unexpected ways where exposure to one stressor may heighten or reduce the resilience to another stressor and their interactive effects may not be uniform across species. Here, we examined how nitrate pollution under a warming scenario affects the aerobic scope (AS), and the hypoxia and heat stress susceptibility of a generally tolerant fish species, common carp Cyprinus carpio. We used a 3 × 2 factorial design, where fish were exposed to one of three ecologically relevant levels of nitrate (0, 50, or 200 mg NO₃^- L^-1) and one of two temperatures (18 °C or 26 °C) for 5 weeks. Warm acclimation increased the AS by 11% due to the maintained standard metabolic rate and increased maximum metabolic rate at higher temperature, and the AS improvement seemed greater at higher nitrate concentration. Warm-acclimated fish exposed to 200 mg NO₃^- L^-1 were less susceptible to acute hypoxia, and fish acclimated at higher temperature exhibited improved heat tolerance (critical thermal maxima, CTMax) by 5 °C. This cross-tolerance can be attributed to the hematological results including maintained haemoglobin and increased haematocrit levels that may have compensated for the initial surge in methaemoglobin at higher nitrate exposure.

Selecting Biomonitors of Atmospheric Nitrogen Deposition: Guidelines for Practitioners and Decision Makers

Environmental pollution is a major threat to public health and is the cause of important economic losses worldwide. Atmospheric nitrogen deposition is one of the most significant components of environmental pollution, which, in addition to being a health risk, is one of the leading drivers of global biodiversity loss. However, monitoring pollution is not possible in many regions of the world because the instrumentation, deployment, operation, and maintenance of automated systems is onerous. An affordable alternative is the use of biomonitors, naturally occurring or transplanted organisms that respond to environmental pollution with a consistent and measurable ecophysiological response. This policy brief advocates for the use of biomonitors of atmospheric nitrogen deposition. Descriptions of the biological and monitoring particularities of commonly utilized biomonitor lichens, bryophytes, vascular epiphytes, herbs, and woody plants, are followed by a discussion of the principal ecophysiological parameters that have been shown to respond to the different nitrogen emissions and their rate of deposition.

Influence of Land Use on the C and N Status of a C4 Invasive Grass in a Semi-Arid Region: Implications for Biomonitoring

Biomonitoring of atmospheric pollution is an increasingly accepted practice. However, most existing biomonitors are usually epiphytic species from mesic environments. This work assessed the suitability of buffelgrass (Cenchrus ciliaris), an invasive C₄ grass in northwestern Mexico, as a biomonitor, by means of the spatial distribution of the carbon and nitrogen content and isotopic signatures for grass samples collected from urban, agricultural, and natural areas throughout the state of Sonora. We found the highest tissue carbon content of 45.6% (on a dry weight basis) and highest nitrogen content of 3.31% for buffelgrass from the Yaqui Valley. We also found the lowest δ¹³C of -15.9‰, and the highest δ¹⁵N of 16.7‰ in the same region. In contrast, the lowest carbon and nitrogen content of 39.4 and 1.49% were found for Bahía de Kino and Río Sonora mountains, respectively. The lowest δ¹⁵N of 2.18‰ and the highest δ¹³C of -13.7‰ were measured for two remote locations. These results show the influence that pollutant emissions, including agriculture and transportation, have on elemental and isotopic composition of vegetation. Buffelgrass is most adequate for tracking carbon and nitrogen emissions in arid environments and for determining alterations on nitrogen soil reactions, as a first approximation for saturation.

Living in polluted waters: A meta-analysis of the effects of nitrate and interactions with other environmental stressors on freshwater taxa

Nutrient effluents from urban and agricultural inputs have resulted in high concentrations of nitrate in freshwater ecosystems. Exposure to nitrate can be particularly threatening to aquatic organisms, but a quantitative synthesis of the overall effects on amphibians, amphipods and fish is currently unavailable. Moreover, in disturbed ecosystems, organisms are unlikely to face a single stressor in isolation, and interactions among environmental stressors can enhance the negative effects of nitrate on organisms. Here, the effects of elevated nitrate on activity level, deformity rates, hatching success, growth and survival of three taxonomic groups of aquatically respiring organisms are documented. Effect sizes were extracted from 68 studies and analysed using meta-analytical techniques. The influence of nitrate on life-stages was also assessed. A factorial meta-analysis was conducted to examine the effect of nitrate and its interaction with other ecological stressors on organismal survival. Overall, the impacts of nitrate are biased towards amphibians (46 studies) and fish (13 studies), and less is known about amphipods (five studies). We found that exposure to nitrate translates to a 79% decrease in activity, a 29% decrease in growth, and reduces survival by 62%. Nitrate exposure also increases developmental deformities but does not affect hatching success. Nitrate exposure was found to influence all life-stages except embryos. Differences in the sensitivity of nitrate among taxonomic groups tended to be negligible. The factorial meta-analysis (14 amphibians and two amphipod studies) showed that nitrate in combination with other stressors affects survival in a non-additive manner. Our results indicate that nitrate can have strong effects on aquatic organisms and can interact with other environmental stressors which compound the negative effects on survival. Overall, the impacts of nitrate and additional stressors are complex requiring a holistic approach to better conserve freshwater biodiversity in the face of ongoing global change.

Isotopic biomonitoring of anthropic carbon emissions in a megalopolis

Atmospheric pollution has become a serious threat for human health and the environment. However, the deployment, operation and maintenance of monitoring networks can represent a high cost for local governments. In certain locations, the use of naturally occurring plants for monitoring pollution can be a useful supplement of existing monitoring networks, and even provide information when other types of monitoring are lacking. In this work, we (i) determined the tissue carbon content and the δ13C values for the epiphytic CAM bromeliad Tillandsia recurvata and the relationship of both parameters with the existing CO concentrations in the Valley of Mexico basin and (ii) mapped the spatial distribution of such elemental and isotopic composition for this plant within the basin, in order to assess its potential as an atmospheric biomonitor of carbon monoxide, a pollutant with important repercussions on public health. The CO concentrations in the basin ranged from 0.41 ppm at rural locations to 0.81 ppm at urban sites. The carbon content of T. recurvata, which averaged 42.9 ± 0.34% (dry weight), was not influenced by the surrounding CO concentration. In contrast, the δ13C depended on the sites where the plants were collected. For example, the values were -13.2‰ in rural areas and as low as -17.5‰ in an urban site. Indeed, the isotopic values had a positive linear relationship with the atmospheric CO concentrations. Given the close relationship observed between the isotopic composition of T. recurvata with the CO concentrations in the Valley of Mexico, the δ13C values can be useful for the detection of atmospheric carbonaceous emissions.

Reframing conservation physiology to be more inclusive, integrative, relevant and forward-looking: reflections and a horizon scan

Applying physiological tools, knowledge and concepts to understand conservation problems (i.e. conservation physiology) has become commonplace and confers an ability to understand mechanistic processes, develop predictive models and identify cause-and-effect relationships. Conservation physiology is making contributions to conservation solutions; the number of 'success stories' is growing, but there remain unexplored opportunities for which conservation physiology shows immense promise and has the potential to contribute to major advances in protecting and restoring biodiversity. Here, we consider how conservation physiology has evolved with a focus on reframing the discipline to be more inclusive and integrative. Using a 'horizon scan', we further explore ways in which conservation physiology can be more relevant to pressing conservation issues of today (e.g. addressing the Sustainable Development Goals; delivering science to support the UN Decade on Ecosystem Restoration), as well as more forward-looking to inform emerging issues and policies for tomorrow. Our horizon scan provides evidence that, as the discipline of conservation physiology continues to mature, it provides a wealth of opportunities to promote integration, inclusivity and forward-thinking goals that contribute to achieving conservation gains. To advance environmental management and ecosystem restoration, we need to ensure that the underlying science (such as that generated by conservation physiology) is relevant with accompanying messaging that is straightforward and accessible to end users.

Drying protocol does not alter plant δ13C and δ15N: a baseline survey for ecological studies

Drying protocols might alter the isotopic signatures of plant samples given that high temperatures can volatilize various organic compounds or delay the halting of physiological processes at lower drying temperatures. We thus evaluated the effect of four drying protocols on the carbon and nitrogen isotopic signatures for 23 species of plants. In particular, leaves were either freeze-dried, placed in a herbarium drying stove (ca. 50°C), in a gravity convection oven (80°C), or microwaved (900 W) in 2-minute pulses, until constant weight. For each species, neither treatment led to significantly different δ¹³C values, which ranged from -31.7 to -12.4‰. The δ¹⁵N values of 21 of the species considered were not affected by the drying protocols, ranging from -11.6 to -8.8‰. For Tillandsia makoyana, significant differences were observed between the freeze dried and the microwaved samples and between the freeze dried samples and those dried at 50°C for Macroptilium gibbosifolium.

Vehicle emissions and fertilizer impact the leaf chemistry of urban trees in Salt Lake Valley, UT

The urban nitrogen (N) and carbon (C) cycles are substantially influenced by human activity. Alterations to these cycles include increased inputs from fossil fuel combustion and fertilizer use. The leaf chemistry of urban trees can be used to distinguish between these different N and C sources. Here, we evaluated relationships between urban vegetation and different N and C sources in street and residential trees in the Salt Lake Valley, Utah. We tested three hypotheses: 1) unfertilized street trees on high traffic density roads will have higher leaf %N, more enriched δ¹⁵N and more depleted δ¹³C than unfertilized street trees on low traffic density roads; 2) trees in high income residential neighborhoods will have higher leaf %N, more depleted δ¹⁵N and more enriched δ¹³C than trees in lower income neighborhoods; and 3) unfertilized street trees will have lower leaf %N, more enriched δ¹⁵N and more depleted δ¹³C than fertilized residential trees. Leaf δ¹⁵N was more enriched near high traffic density roads for one study species. However, street tree δ¹⁵N and δ¹³C were largely influenced by vehicle emissions from primary and secondary roads within 1000 m radius rather than the immediately adjacent road. Leaf δ¹³C was correlated with neighborhood income, although this relationship may be the result of variations in irrigation practices rather than variations in C sources. Finally, unfertilized trees in downtown Salt Lake had lower leaf %N, more enriched δ¹⁵N and more depleted δ¹³C than fertilized trees. These results highlight that urban trees can serve as biomonitors of the environment. Moreover, they emphasize that roads can have large spatial footprints and that the leaf chemistry of urban vegetation may be influenced by the spatial patterns in roads and road densities at the landscape scale.

Characterization of nitrogen deposition in a megalopolis by means of atmospheric biomonitors

An increase of nitrogen deposition resulting from human activities is not only a major threat for global biodiversity, but also for human health, especially in highly populated regions. It is thus important and in some instances legally mandated to monitor reactive nitrogen species in the atmosphere. The utilization of widely distributed biological species suitable for biomonitoring may be a good alternative. We assessed the suitability of an ensemble of atmospheric biomonitors of nitrogen deposition by means of an extensive sampling of a lichen, two mosses, and a bromeliad throughout the Valley of Mexico, whose population reaches 30 million, and subsequent measurements of nitrogen metabolism parameters. In all cases we found significant responses of nitrogen content, C:N ratio and the δ15N to season and site. In turn, the δ15N for the mosses responded linearly to the wet deposition. Also, the nitrogen content (R2 = 0.7), the C:N ratio (R2 = 0.6), and δ15N (R2 = 0.5) for the bromeliad had a linear response to NOx. However, the bromeliad was not found in sites with NOx concentrations exceeding 80 ppb, apparently of as a consequence of excess nitrogen. These biomonitors can be utilized in tandem to determine the status of atmospheric nitrogenous pollution in regions without monitoring networks for avoiding health problems for ecosystems and humans.