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Wright EA, Reddock MB, Roberts EK, Legesse YW, Perry G, Bradley RD. Genetic characterization of the prion protein gene in camels ( Camelus) with comments on the evolutionary history of prion disease in Cetartiodactyla. PeerJ 2024; 12:e17552. [PMID: 38948234 PMCID: PMC11214740 DOI: 10.7717/peerj.17552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Accepted: 05/20/2024] [Indexed: 07/02/2024] Open
Abstract
Transmissible spongiform encephalopathies (TSEs) are a fatal neurogenerative disease that include Creutzfeldt-Jakob disease in humans, scrapie in sheep and goats, bovine spongiform encephalopathy (BSE), and several others as well as the recently described camel prion disease (CPD). CPD originally was documented in 3.1% of camels examined during an antemortem slaughterhouse inspection in the Ouargla region of Algeria. Of three individuals confirmed for CPD, two were sequenced for the exon 3 of the prion protein gene (PRNP) and were identical to sequences previously reported for Camelus dromedarius. Given that other TSEs, such as BSE, are known to be capable of cross-species transmission and that there is household consumption of meat and milk from Camelus, regulations to ensure camel and human health should be a One Health priority in exporting countries. Although the interspecies transmissibility of CPD currently is unknown, genotypic characterization of Camelus PRNP may be used for predictability of predisposition and potential susceptibility to CPD. Herein, eight breeds of dromedary camels from a previous genetic (mitochondrial DNA and microsatellites) and morphological study were genotyped for PRNP and compared to genotypes from CPD-positive Algerian camels. Sequence data from PRNP indicated that Ethiopian camels possessed 100% sequence identity to CPD-positive camels from Algeria. In addition, the camel PRNP genotype is unique compared to other members of the Orders Cetartiodactyla and Perissodactyla and provides an in-depth phylogenetic analysis of families within Cetartiodactyla and Perissodactyla that was used to infer the evolutionary history of the PRNP gene.
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Affiliation(s)
- Emily A. Wright
- Natural Science Research Laboratory, Museum of Texas Tech University, Lubbock, TX, United States of America
| | - Madison B. Reddock
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, United States of America
| | - Emma K. Roberts
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, United States of America
- Climate Center, Texas Tech University, Lubbock, TX, United States of America
| | - Yoseph W. Legesse
- School of Animal and Range Sciences, Haramaya University, Dire Dawa, Ethiopia
- Institute of Pastoral and Agropastoral Development Studies, Jigjiga University, Jigjiga, Ethiopia
| | - Gad Perry
- Department of Natural Resources Management, Texas Tech University, Lubbock, TX, United States of America
| | - Robert D. Bradley
- Natural Science Research Laboratory, Museum of Texas Tech University, Lubbock, TX, United States of America
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, United States of America
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Yakubu A, Okpeku M, Shoyombo AJ, Onasanya GO, Dahloum L, Çelik S, Oladepo A. Exploiting morphobiometric and genomic variability of African indigenous camel populations-A review. Front Genet 2022; 13:1021685. [PMID: 36579332 PMCID: PMC9791103 DOI: 10.3389/fgene.2022.1021685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Accepted: 11/28/2022] [Indexed: 12/14/2022] Open
Abstract
Camels (Camelus dromedarius) in Africa are adapted to arid and the semi-arid environmental conditions, and are valuable for meat, milk and fiber production. On account of the growing demand for camels in this continent, there is a need for knowledge on their phenotypic and genetic diversity. This is fundamental to sustainable herd management and utilization including the design of appropriate breeding and conservation strategies. We reviewed studies on the phenotypic and genetic characterization, breeding objectives, systems of production, productive and reproductive performances, and pathways for the sustainable rearing and use of camels in Africa. The morphological and genetic diversity, productive and reproductive abilities of African camels suggest the existence of genetic variations that can be utilized for breeds/ecotypes' genetic improvement and conservation. Possible areas of intervention include the establishment of open nucleus and community-based breeding schemes and utilization of modern reproductive technologies for the genetic improvement of milk and meat yields, sustainable management of rangelands, capacity building of the pastoralists and agro-pastoralists, institutional supports, formation of centralized conservation centres and efficient and effective marketing systems.
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Affiliation(s)
- Abdulmojeed Yakubu
- Department of Animal Science, Faculty of Agriculture, Centre for Sustainable Agriculture and Rural Development, Shabu-Lafia Campus, Nasarawa State University, Keffi, Nigeria,*Correspondence: Abdulmojeed Yakubu, ; Moses Okpeku,
| | - Moses Okpeku
- Discipline of Genetics, School of Life Sciences, University of Kwa-Zulu Natal, Durban, South Africa,*Correspondence: Abdulmojeed Yakubu, ; Moses Okpeku,
| | | | - Gbolabo O. Onasanya
- Department of Animal Science, Federal University Dutse, Dutse, Nigeria,Deparment of Animal Genetics and Breeding, Veterinary College and Research Institute, Tamil Nadu Veterinary and Animal Sciences University, Chennai, India
| | - Lahouari Dahloum
- Départment of Agronomy, Faculty of Natural Science and Life, Abdelhamid Ibn Badis, University, Mostaganem, Algeria
| | - Senol Çelik
- Department of Animal Science, Faculty of Agriculture, Bingöl University, Bingöl, Turkey
| | - Abolade Oladepo
- Discipline of Genetics, School of Life Sciences, University of Kwa-Zulu Natal, Durban, South Africa
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Determination of some body measurements of camels with three-dimensional modeling method (3D). Trop Anim Health Prod 2021; 53:554. [PMID: 34851453 DOI: 10.1007/s11250-021-02985-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 10/29/2021] [Indexed: 10/19/2022]
Abstract
In this study, the use of the three-dimensional modeling method was tested in taking some body measurements in camels with a practical method and was compared with other measurement methods. As the animal material of the study, 12 single-humped dromedary female camels and 14 double-humped Camelus dromedarius × Camelus bactrianus: F1 male camels, a total of 26 camels, were used in three camel farms in Incirliova district of Aydın province. The body measurements are taken from each animal by using different three methods, namely by the manual method (MM), by the photography method (PM), and by the three-dimensional modeling method (3D) were the withers height (WH), the back height (BH), the rump height (RH), the body length (BL), the brisket height (BRH), the abdominal height (AH), the shoulder width (SW), and the rump width (RW), and these values were compared with each other. As a result of this study, the mean values of MM and 3D measurement values were very close to each other and the difference between them was found to be statistically insignificant (P < 0.05). The difference between the means of PM and MM/3D measurement values was found to be significant (P < 0.05). In the measurements taken by MM, 3D, and PM methods in male camels, the values obtained by MM and 3D methods for WH, BH, RH, BRH, AH, BL, and SW were very close to each other and the differences between them were found insignificant statistically (p < 0.05). On the determined regression graph, a linear was found between MM and 3D measurement values. As a result of this study, it has been determined that the 3D modeling method can be used as a remote and more practical method in determining the morphological features of large-scale animals such as camels more reliably, more easily, and more practically.
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Piro M. Aspects of Molecular Genetics in Dromedary Camel. Front Genet 2021; 12:723181. [PMID: 34764978 PMCID: PMC8577052 DOI: 10.3389/fgene.2021.723181] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 09/24/2021] [Indexed: 11/17/2022] Open
Abstract
Dromedary camels are unique in their morphological and physiological characteristics and are capable of providing milk and meat even under extreme environmental conditions. Like other species, the dromedary camel has also benefitted from the development of the molecular genetics to increase the knowledge about different aspect in camel genetics (genetic variation, molecular marker, parentage control, gene of interest, whole genome, dating…etc.). In this paper we review the different molecular genetic technics used in this particular species and future prospects. Dromedary genetic studies started in the end of the 1980s with phenotypic evaluation and the attempts to highlight the protein and biochemical diversity. In the 2000s, with the development of molecular markers such as microsatellites, genetic diversity of different types in several countries were estimated and microsatellites were also used for parentage control. In terms of genetic characterization, microsatellites revealed a defined global structure, differentiating East African and South Arabian dromedaries from North African, North Arabian, and South Asian individuals, respectively. Also, mitochondrialDNA sequence analysis of ancient DNA proved to be crucial in resolving domestication processes in dromedaries. Ancient and modern DNA revealed dynamics of domestication and cross-continental dispersion of the dromedary. Nuclear SNPs, single nucleotide polymorphisms changes that occur approximately each 1000 bps in the mammalian genome were also applied in some studies in dromedary. These markers are a very useful alternative to microsatellites and have been employed in some studies on genetic diversity and relevant phenotypic traits in livestock. Finally, thanks to the use of Next Generation Sequencing (NGS) the whole-genome assemblies of the dromedary (Camelus dromedarius) and a work to establish the organization of the dromedary genome at chromosome level were recently published.
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Affiliation(s)
- Mohammed Piro
- Veterinary Genetics Laboratory (LAGEV), Hassan II Agronomic and Veterinary Institute, Rabat, Morocco
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Alaqeely R, Alhajeri BH, Almathen F, Alhaddad H. Mitochondrial Sequence Variation, Haplotype Diversity, and Relationships Among Dromedary Camel-Types. Front Genet 2021; 12:723964. [PMID: 34527024 PMCID: PMC8435798 DOI: 10.3389/fgene.2021.723964] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 08/12/2021] [Indexed: 11/22/2022] Open
Abstract
Dromedary camels are outstanding livestock that developed efficient abilities to tolerate desert conditions. Many dromedary camel-types (i.e., named populations) exist but lack defined specific breed standards, registries, and breeders’ governing organizations. The breed status of dromedary camel-types can partly be assessed by exploring mitochondrial DNA (mtDNA) variation. Accordingly, this study aimed to examine the breed status and the inter-population relationships of dromedary camel-types by analyzing sequence variation in the mtDNA control region and in three coding genes [cytochrome b, threonine, and proline tRNA, and part of the displacement loop (D-loop)] (867 bp region). Tail hair samples (n = 119) that represent six camel-types from Kuwait were collected, extracted, sequenced, and compared to other publicly available sequences (n = 853). Within the sequenced mitochondrial region, 48 polymorphic sites were identified that contributed to 82 unique haplotypes across 37 camel-types. Haplotype names and identities were updated to avoid previous discrepancies. When all sequences were combined (n = 972), a nucleotide diversity of 0.0026 and a haplotype diversity of 0.725 was observed across the dromedary-types. Two major haplogroups (A and B) were identified and the B1 haplotype was predominant and found in almost all dromedary-types whereas the A haplotypes were more abundant in African regions. Non-metric multidimensional scaling revealed an increased similarity among Arabian Peninsula “Mezayen” camel-types, despite their defining coat colors. The relationships among dromedary camel-types can partly be explained by mtDNA. Future work aimed at a deeper understanding of camel-type breed status should focus on a high number of nuclear markers.
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Affiliation(s)
- Randa Alaqeely
- Department of Biological Sciences, Kuwait University, Kuwait City, Kuwait
| | - Bader H Alhajeri
- Department of Biological Sciences, Kuwait University, Kuwait City, Kuwait
| | - Faisal Almathen
- Department of Veterinary Public Health, College of Veterinary Medicine, King Faisal University, Al-Ahsa, Saudi Arabia.,The Camel Research Center, King Faisal University, Al-Ahsa, Saudi Arabia
| | - Hasan Alhaddad
- Department of Biological Sciences, Kuwait University, Kuwait City, Kuwait
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Parés-Casanova PM, Siddiq AB, Morilla-Gorgot C, Onar V. Lower palatine developmental instability in hybrid Old World camelids. J Adv Vet Anim Res 2020; 7:663-668. [PMID: 33409310 PMCID: PMC7774784 DOI: 10.5455/javar.2020.g465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Revised: 08/27/2020] [Accepted: 09/05/2020] [Indexed: 11/23/2022] Open
Abstract
Objective: In this research study, we explore the fluctuating asymmetry (FA) of palate Camelus hybrids and their parental species (dromedary and Bactrian). Materials and Methods: We studied a sample of pictures from 27 adult skulls of pure Camelus dromedarius (n = 13), Camelus bactrianus (n = 7), and their crosses (n = 7), from two different collections. A set of 11 semilandmarks was located on the palatal region and was studied by means of geometric morphometric methods. The asymmetric variation was analyzed and evaluated for allometric effects, and variation among these three groups was studied using a canonical variates analysis. Results: Among hybrids, there appeared a significantly lower amount of FA in comparison to the parental species, which may reflect the lower levels of genetic stress and higher levels of directional asymmetry, which may suggest the presence of strongly transgressive mastication compared to pure species. Conclusion: Camel hybrids would present increased developmental stability and better adaptation over those of parenteral lines.
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Affiliation(s)
| | - Abu Bakar Siddiq
- Department of Anthropology, Faculty of Letters, Mardin Artuklu University, Artuklu, Turkey
| | | | - Vedat Onar
- Department of Anatomy, Faculty of Veterinary Medicine, Istanbul University-Cerrahpaşa, Istanbul, Turkey
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Burger PA, Ciani E, Faye B. Old World camels in a modern world - a balancing act between conservation and genetic improvement. Anim Genet 2019; 50:598-612. [PMID: 31532019 PMCID: PMC6899786 DOI: 10.1111/age.12858] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/22/2019] [Indexed: 12/23/2022]
Abstract
Old World camels have served humans in cross‐continental caravans, transporting people and goods, connecting different cultures and providing milk, meat, wool and draught since their domestication around 3000–6000 years ago. In a world of modern transport and fast connectivity, these beasts of burden seem to be out‐dated. However, a growing demand for sustainable milk and meat production, especially in countries affected by climate change and increasing desertification, brings dromedaries (Camelus dromedarius) and Bactrian camels (Camelus bactrianus) back onstage and into the focus of animal breeders and scientists. In this review on the molecular genetics of these economically important species we give an overview about the evolutionary history, domestication and dispersal of Old World camels, whereas highlighting the need for conservation of wild two‐humped camels (Camelus ferus) as an evolutionarily unique and highly endangered species. We provide cutting‐edge information on the current molecular resources and on‐going sequencing projects. We cannot emphasise enough the importance of balancing the need for improving camel production traits with maintaining the genetic diversity in two domestic species with specific physiological adaptation to a desert environment.
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Affiliation(s)
- P A Burger
- Research Institute of Wildlife Ecology, Vetmeduni Vienna, Vienna, 1160, Austria
| | - E Ciani
- Dipartimento di Bioscienze, Biotecnologie e Biofarmaceutica, Università degli Studi di Bari 'Aldo Moro', Via Orabona, 4, 70125, Bari, Italy
| | - B Faye
- CIRAD-ES, UMR SELMET TAC/112A, Campus international de Baillarguet, 34398, Montpellier cedex, France
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