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Singh P, Maurya SK, Singh D, Sane AP. The rose INFLORESCENCE DEFICIENT IN ABSCISSION-LIKE genes, RbIDL1 and RbIDL4, regulate abscission in an ethylene-responsive manner. PLANT CELL REPORTS 2023; 42:1147-1161. [PMID: 37069436 DOI: 10.1007/s00299-023-03017-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Accepted: 04/03/2023] [Indexed: 06/16/2023]
Abstract
KEY MESSAGE RbIDL1 and RbIDL4 are up-regulated in an ethylene-responsive manner during rose petal abscission and restored the Arabidopsis ida-2 mutant abscission defect suggesting functional conservation of the IDA pathway in rose. Abscission is an ethylene-regulated developmental process wherein plants shed unwanted organs in a controlled manner. The INFLORESCENCE DEFICIENT IN ABSCISSION family has been identified as a key regulator of abscission in Arabidopsis, encoding peptides that interact with receptor-like kinases to activate abscission. Loss of function ida mutants show abscission deficiency in Arabidopsis. Functional conservation of the IDA pathway in other plant abscission processes is a matter of interest given the discovery of these genes in several plants. We have identified four members of the INFLORESCENCE DEFICIENT IN ABSCISSION-LIKE family from the ethylene-sensitive, early-abscising fragrant rose, Rosa bourboniana. All four are conserved in sequence and possess well-defined PIP, mIDa and EPIP motifs. Three of these, RbIDL1, RbIDL2 and RbIDL4 show a three-fourfold increase in transcript levels in petal abscission zones (AZ) during ethylene-induced petal abscission as well as natural abscission. The genes are also expressed in other floral tissues but respond differently to ethylene in these tissues. RbIDL1 and RbIDL4, the more prominently expressed IDL genes in rose, can complement the abscission defect of the Arabidopsis ida-2 mutant; while, promoters of both genes can drive AZ-specific expression in an ethylene-responsive manner even in Arabidopsis silique AZs indicating recognition of AZ-specific and ethylene-responsive cis elements in their promoters by the abscission machinery of rose as well as Arabidopsis.
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Affiliation(s)
- Priya Singh
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Shiv Kumar Maurya
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
- Department of Botany, Kishori Raman (PG) College, Mathura, India
| | - Deepika Singh
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India
| | - Aniruddha P Sane
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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2
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Yu Y, Beyene G, Villmer J, Duncan KE, Hu H, Johnson T, Doust AN, Taylor NJ, Kellogg EA. Grain shattering by cell death and fracture in Eragrostis tef. PLANT PHYSIOLOGY 2023; 192:222-239. [PMID: 36756804 PMCID: PMC10152664 DOI: 10.1093/plphys/kiad079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 12/15/2022] [Accepted: 01/11/2023] [Indexed: 05/03/2023]
Abstract
Abscission, known as shattering in crop species, is a highly regulated process by which plants shed parts. Although shattering has been studied extensively in cereals and a number of regulatory genes have been identified, much diversity in the process remains to be discovered. Teff (Eragrostis tef) is a crop native to Ethiopia that is potentially highly valuable worldwide for its nutritious grain and drought tolerance. Previous work has suggested that grain shattering in Eragrostis might have little in common with other cereals. In this study, we characterize the anatomy, cellular structure, and gene regulatory control of the abscission zone (AZ) in E. tef. We show that the AZ of E. tef is a narrow stalk below the caryopsis, which is common in Eragrostis species. X-ray microscopy, scanning electron microscopy, transmission electron microscopy, and immunolocalization of cell wall components showed that the AZ cells are thin walled and break open along with programmed cell death (PCD) at seed maturity, rather than separating between cells as in other studied species. Knockout of YABBY2/SHATTERING1, documented to control abscission in several cereals, had no effect on abscission or AZ structure in E. tef. RNA sequencing analysis showed that genes related to PCD and cell wall modification are enriched in the AZ at the early seed maturity stage. These data show that E. tef drops its seeds using a unique mechanism. Our results provide the groundwork for understanding grain shattering in Eragrostis and further improvement of shattering in E. tef.
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Affiliation(s)
- Yunqing Yu
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
| | - Getu Beyene
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
| | - Justin Villmer
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
| | - Keith E Duncan
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
| | - Hao Hu
- Department of Plant Biology, Ecology, and Evolution, Oklahoma State University, Stillwater, OK 74078, USA
| | - Toni Johnson
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
| | - Andrew N Doust
- Department of Plant Biology, Ecology, and Evolution, Oklahoma State University, Stillwater, OK 74078, USA
| | - Nigel J Taylor
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
| | - Elizabeth A Kellogg
- Donald Danforth Plant Science Center, 975 North Warson Road, St. Louis, MO 63132, USA
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3
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ul Haq A, Lone ML, Farooq S, Parveen S, Altaf F, Tahir I, Kaushik P, El-Serehy HA. Efficacy of salicylic acid in modulating physiological andbiochemical mechanisms to improve postharvest longevity in cut spikes of Consolida ajacis (L.) Schur. Saudi J Biol Sci 2022; 29:713-720. [PMID: 35197736 PMCID: PMC8848131 DOI: 10.1016/j.sjbs.2021.11.057] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 11/21/2021] [Accepted: 11/28/2021] [Indexed: 01/24/2023] Open
Abstract
Postharvest losses of cut flowers is one of the considerable challenges restricting their efficient marketability. Consequently, such challenges have triggered a constant hunt for developing compatible postharvest treatments to mitigate postharvest losses. Interestingly, recent studies entrench extensive role of salicylic acid (SA) in mitigating postharvest losses in various flower systems. The current investigation focusses on role of SA in augmenting physiological and biochemical responses to mitigate postharvest senescence in cut spikes of Consolida ajacis. The cut spikes of C. ajacis were supplemented with various SA treatments viz, 2 mM, 4 mM, 6 mM. The effects of these treatments were evaluated against control set of spikes placed in distilled water. Our study indicates considerable increment in postharvest longevity of cut spikes, besides an increase in solution uptake, sugar and protein content of tepal tissues.SA augmented antioxidant system via upsurge in phenolic content and antioxidant enzymes viz, superoxide dismutase (SOD), catalase (CAT) and ascorbate peroxidase (APX) to forfend reactive oxygen species (ROS) related oxidative damage. SA profoundly reduced lipoxygenase (LOX) activity to preserve the membrane integrity and thus prevented seepage of solutes from tepal tissues. These results authenticate SA particularly 4 mM concentration as effective postharvest treatment to preserve the postharvest quality of C. ajacis cut spikes.
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Affiliation(s)
- Aehsan ul Haq
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Hazratbal, Srinagar 190006, India
| | - Mohammad Lateef Lone
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Hazratbal, Srinagar 190006, India
| | - Sumira Farooq
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Hazratbal, Srinagar 190006, India
| | - Shazia Parveen
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Hazratbal, Srinagar 190006, India
| | - Foziya Altaf
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Hazratbal, Srinagar 190006, India
| | - Inayatullah Tahir
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Hazratbal, Srinagar 190006, India
- Corresponding author.
| | - Prashant Kaushik
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, 46022 Valencia, Spain
| | - Hamed A. El-Serehy
- Department of Zoology, College of Science, King Saud University, Riyadh l1451, Saudi Arabia
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Singh P, Bharti N, Singh AP, Tripathi SK, Pandey SP, Chauhan AS, Kulkarni A, Sane AP. Petal abscission in fragrant roses is associated with large scale differential regulation of the abscission zone transcriptome. Sci Rep 2020; 10:17196. [PMID: 33057097 PMCID: PMC7566604 DOI: 10.1038/s41598-020-74144-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 09/08/2020] [Indexed: 12/03/2022] Open
Abstract
Flowers of fragrant roses such as Rosa bourboniana are ethylene-sensitive and undergo rapid petal abscission while hybrid roses show reduced ethylene sensitivity and delayed abscission. To understand the molecular mechanism underlying these differences, a comparative transcriptome of petal abscission zones (AZ) of 0 h and 8 h ethylene-treated flowers from R. bourboniana was performed. Differential regulation of 3700 genes (1518 up, 2182 down) representing 8.5% of the AZ transcriptome was observed between 0 and 8 h ethylene-treated R. bourboniana petal AZ. Abscission was associated with large scale up-regulation of the ethylene pathway but prominent suppression of the JA, auxin and light-regulated pathways. Regulatory genes encoding kinases/phosphatases/F-box proteins and transcription factors formed the major group undergoing differential regulation besides genes for transporters, wall modification, defense and phenylpropanoid pathways. Further comparisons with ethylene-treated petals of R. bourboniana and 8 h ethylene-treated AZ (R. hybrida) identified a core set of 255 genes uniquely regulated by ethylene in R. bourboniana AZ. Almost 23% of these encoded regulatory proteins largely conserved with Arabidopsis AZ components. Most of these were up-regulated while an entire set of photosystem genes was prominently down-regulated. The studies provide important information on regulation of petal abscission in roses.
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Affiliation(s)
- Priya Singh
- Molecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India. .,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
| | - Neeraj Bharti
- Bioinformatics Centre, Savitribai Phule Pune University, Pune, 411007, India.,High Performance Computing-Medical and Bioinformatics Applications Group, Centre for Development of Advanced Computing, Pune, 411008, India
| | - Amar Pal Singh
- Molecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.,National Institute for Plant Genome Research, New Delhi, 110067, India
| | - Siddharth Kaushal Tripathi
- Molecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.,National Centre for Natural Products Research, School of Pharmacy, University of Mississippi, Oxford, MS, 38677, USA
| | - Saurabh Prakash Pandey
- Molecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Abhishek Singh Chauhan
- Molecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Abhijeet Kulkarni
- Bioinformatics Centre, Savitribai Phule Pune University, Pune, 411007, India
| | - Aniruddha P Sane
- Molecular Biology and Biotechnology, CSIR-National Botanical Research Institute, Lucknow, 226001, India. .,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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Singh P, Singh AP, Tripathi SK, Kumar V, Sane AP. Petal abscission in roses is associated with the activation of a truncated version of the animal PDCD4 homologue, RbPCD1. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 288:110242. [PMID: 31521226 DOI: 10.1016/j.plantsci.2019.110242] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2019] [Accepted: 08/27/2019] [Indexed: 06/10/2023]
Abstract
Abscission is a developmental process that leads to shedding of organs not needed by the plant. Apart from wall hydrolysis, the cells of the abscission zone (AZ) are also believed to undergo programmed cell death (PCD). We show that ethylene-induced petal abscission in Rosa bourboniana is accompanied with the activation of RbPCD1 (PROGRAMMED CELL DEATH LIKE 1) encoding a protein of 78 amino acids. Its expression increases during natural and ethylene-induced petal abscission. Its transcription in most tissues is up-regulated by ethylene. RbPCD1 shows similarity to the N-terminal domain of animal PDCD4 (PROGRAMMED CELL DEATH PROTEIN 4) proteins that are activated during apoptosis and function as transcriptional and translational repressors. RbPCD1 resides in the nucleus and cytoplasm and acts as a transcriptional repressor. Constitutive expression of RbPCD1 in transgenic Arabidopsis is seedling lethal. Heat-induced expression of RbPCD1 under the soybean heat-shock promoter affects leaf function, inflorescence development, silique formation, seed yield and reduces survival. Nuclear localization of RbPCD1 is necessary for manifestation of its effects. RbPCD1 may be necessary to mediate some of the ethylene-induced changes during abscission and senescence in specific tissues.
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Affiliation(s)
- Priya Singh
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Amar Pal Singh
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India
| | - Siddharth Kaushal Tripathi
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India
| | - Vinod Kumar
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Aniruddha P Sane
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (Council of Scientific and Industrial Research), Lucknow, 226001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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Pandey SP, Singh AP, Srivastava S, Chandrashekar K, Sane AP. A strong early acting wound-inducible promoter, RbPCD1pro, activates cryIAc expression within minutes of wounding to impart efficient protection against insects. PLANT BIOTECHNOLOGY JOURNAL 2019; 17:1458-1470. [PMID: 30623549 PMCID: PMC6576099 DOI: 10.1111/pbi.13071] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2017] [Accepted: 12/12/2018] [Indexed: 06/09/2023]
Abstract
The expression of insecticidal proteins under constitutive promoters in transgenic plants is fraught with problems like developmental abnormalities, yield drag, expression in unwanted tissues, and seasonal changes in expression. RbPCD1pro, a rapid, early acting wound-inducible promoter from rose that is activated within 5 min of wounding, was isolated and characterized. Wounding increased transcript levels up to 150 and 500 folds within 5 and 20 min coupled with high translation as seen by histochemical GUS enzyme activity within 5-20 min. RbPCD1pro was activated by both sucking and chewing insects and showed wound-inducible expression in various aerial tissues of plants representing commercially important dicot and monocot families. The promoter showed no expression in any vegetative tissue except upon wounding. Functionality of RbPCD1pro was tested by its ability to drive expression of the insecticidal protein gene cryIAc in transgenic Arabidopsis and tomato. Strong wound-inducible CryIAc expression was observed in both plants that increased 100-350 fold (Arabidopsis) and 280-600 fold (tomato) over the unwounded background within 5 min and over 1000-1600 fold within 20 min. The unwounded background level was just 3-6% of the CaMV35S promoter while wound-induced expression was 5-27 folds higher than the best CaMV35S line in just 5 min and 80-fold higher in 20 min. Transgenic plants showed strong resistance even to larger fourth instar larvae of H. armigera and no abnormalities in development and general plant growth. This is one of the earliest acting promoters with wide biotechnological application across monocot and dicot plants.
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Affiliation(s)
- Saurabh Prakash Pandey
- Plant Gene Expression LabCSIR‐National Botanical Research InstituteLucknowIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Amar Pal Singh
- Plant Gene Expression LabCSIR‐National Botanical Research InstituteLucknowIndia
- Present address:
National Institute for Plant Genome ResearchNew Delhi110067India
| | - Shruti Srivastava
- Plant Gene Expression LabCSIR‐National Botanical Research InstituteLucknowIndia
| | - Krishnappa Chandrashekar
- Genomics and Molecular Biology DivisionCSIR‐National Botanical Research InstituteLucknowIndia
- Present address:
IARI Regional CentreAundh, Pune411067India
| | - Aniruddha P. Sane
- Plant Gene Expression LabCSIR‐National Botanical Research InstituteLucknowIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
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Buono RA, Hudecek R, Nowack MK. Plant proteases during developmental programmed cell death. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:2097-2112. [PMID: 30793182 PMCID: PMC7612330 DOI: 10.1093/jxb/erz072] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Accepted: 02/12/2019] [Indexed: 05/08/2023]
Abstract
Proteases are among the key regulators of most forms of programmed cell death (PCD) in animals. Many PCD processes have also been associated with protease expression or activation in plants, However, functional evidence for the roles and actual modes of action of plant proteases in PCD remains surprisingly limited. In this review, we provide an update on protease involvement in the context of developmentally regulated plant PCD. To illustrate the diversity of protease functions, we focus on several prominent developmental PCD processes, including xylem and tapetum maturation, suspensor elimination, endosperm degradation, and seed coat formation, as well as plant senescence processes. Despite the substantial advances in the field, protease functions are often only correlatively linked to developmental PCD, and the specific molecular roles of proteases in many developmental PCD processes remain to be elucidated.
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Affiliation(s)
- Rafael Andrade Buono
- Department of Plant Biotechnology and Genetics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Roman Hudecek
- Department of Plant Biotechnology and Genetics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Moritz K. Nowack
- Department of Plant Biotechnology and Genetics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
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Singh P, Singh AP, Sane AP. Differential and reciprocal regulation of ethylene pathway genes regulates petal abscission in fragrant and non-fragrant roses. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 280:330-339. [PMID: 30824012 DOI: 10.1016/j.plantsci.2018.12.013] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 12/12/2018] [Accepted: 12/14/2018] [Indexed: 06/09/2023]
Abstract
The fragrant rose, Rosa bourboniana, is highly sensitive to ethylene and shows rapid petal abscission (within 16-18 h) while the non-fragrant hybrid rose, R. hybrida, shows delayed abscission (50-52 h) due to reduced ethylene sensitivity. To understand the molecular basis governing these differences, all components of the ethylene pathway (biosynthesis/ receptor/signalling) were studied for expression during abscission. Transcript accumulation of most ethylene biosynthesis genes (ACS/ACO families) increased rapidly in petal abscission zones of R. bourboniana within 4-8 h of ethylene treatment. The expression of most receptor and signalling genes encoding CTRs, EIN2 and EIN3/EIL homologues also followed similar kinetics. Under natural field conditions where abscission takes longer, there was a temporal delay in transcript accumulation of most ethylene pathway genes while some biosynthesis genes (showing reduced ethylene sensitivity) were more strongly up-regulated by abscission cues. In contrast, in R. hybrida where even ethylene-induced abscission is considerably delayed, transcript accumulation of most ethylene biosynthesis and signalling genes was, surprisingly, reduced by ethylene and showed an opposite regulation compared to R. bourboniana. The results suggest that differential and reciprocal regulation of ethylene pathway is one of the major reasons for differences in petal abscission and vase-life between Rosa bourboniana and R. hybrida.
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Affiliation(s)
- Priya Singh
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (CSIR), Lucknow, 226001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Amar Pal Singh
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (CSIR), Lucknow, 226001, India
| | - Aniruddha P Sane
- Plant Gene Expression Lab, CSIR-National Botanical Research Institute (CSIR), Lucknow, 226001, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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Sundaresan S, Philosoph-Hadas S, Ma C, Jiang CZ, Riov J, Mugasimangalam R, Kochanek B, Salim S, Reid MS, Meir S. The Tomato Hybrid Proline-rich Protein regulates the abscission zone competence to respond to ethylene signals. HORTICULTURE RESEARCH 2018; 5:28. [PMID: 29872533 PMCID: PMC5981600 DOI: 10.1038/s41438-018-0033-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Revised: 03/05/2018] [Accepted: 03/08/2018] [Indexed: 05/04/2023]
Abstract
The Tomato Hybrid Proline-rich Protein (THyPRP) gene was specifically expressed in the tomato (Solanum lycopersicum) flower abscission zone (FAZ), and its stable antisense silencing under the control of an abscission zone (AZ)-specific promoter, Tomato Abscission Polygalacturonase4, significantly inhibited tomato pedicel abscission following flower removal. For understanding the THyPRP role in regulating pedicel abscission, a transcriptomic analysis of the FAZ of THyPRP-silenced plants was performed, using a newly developed AZ-specific tomato microarray chip. Decreased expression of THyPRP in the silenced plants was already observed before abscission induction, resulting in FAZ-specific altered gene expression of transcription factors, epigenetic modifiers, post-translational regulators, and transporters. Our data demonstrate that the effect of THyPRP silencing on pedicel abscission was not mediated by its effect on auxin balance, but by decreased ethylene biosynthesis and response. Additionally, THyPRP silencing revealed new players, which were demonstrated for the first time to be involved in regulating pedicel abscission processes. These include: gibberellin perception, Ca2+-Calmodulin signaling, Serpins and Small Ubiquitin-related Modifier proteins involved in post-translational modifications, Synthaxin and SNARE-like proteins, which participate in exocytosis, a process necessary for cell separation. These changes, occurring in the silenced plants early after flower removal, inhibited and/or delayed the acquisition of the competence of the FAZ cells to respond to ethylene signaling. Our results suggest that THyPRP acts as a master regulator of flower abscission in tomato, predominantly by playing a role in the regulation of the FAZ cell competence to respond to ethylene signals.
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Affiliation(s)
- Srivignesh Sundaresan
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Rishon LeZiyon, Israel
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
- Present Address: Department of Nano Science and Technology, Tamil Nadu Agricultural University, Coimbatore, India
| | - Sonia Philosoph-Hadas
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Rishon LeZiyon, Israel
| | - Chao Ma
- Department of Plant Sciences, University of California, Davis, CA USA
- Present Address: Beijing Key Laboratory of Development and Quality Control of Ornamental Crops, Department of Ornamental Horticulture, China Agricultural University, Beijing, China
| | - Cai-Zhong Jiang
- Department of Plant Sciences, University of California, Davis, CA USA
- Crops Pathology & Genetic Research Unit, USDA-ARS, Davis, CA USA
| | - Joseph Riov
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Raja Mugasimangalam
- Department of Bioinformatics, QTLomics Technologies Pvt. Ltd, Bangalore, India
| | - Betina Kochanek
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Rishon LeZiyon, Israel
| | - Shoshana Salim
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Rishon LeZiyon, Israel
| | - Michael S. Reid
- Department of Plant Sciences, University of California, Davis, CA USA
| | - Shimon Meir
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization (ARO), The Volcani Center, Rishon LeZiyon, Israel
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Ahmad SS, Tahir I. Increased oxidative stress, lipid peroxidation and protein degradation trigger senescence in Iris versicolor L. flowers. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2016; 22:507-514. [PMID: 27924123 PMCID: PMC5120049 DOI: 10.1007/s12298-016-0392-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2016] [Revised: 10/19/2016] [Accepted: 10/20/2016] [Indexed: 05/30/2023]
Abstract
Dynamics in various physiological and biochemical aspects were studied during various stages (I-tight bud stage to VI-senescent stage) of flower development in Iris versicolor. Floral diameter, fresh & dry mass and water content increased during flower opening and decreased towards senescence. Senescence was found to be related to the increased lipid peroxidation which was reflected in the decreased membrane stability index towards senescence. This increase in the lipid peroxidation was probably initiated by increased lipoxygenase activity which shot up just prior to the increase in lipid peroxidation. Soluble protein content showed a marginal decrease towards senescence with a corresponding increase in specific protease activity. Sugar fractions and α-amino acids showed a significant decrease towards senescence. Superoxide dismutase and ascorbate peroxidase activity increased as the flowers opened and thereafter a significant decrease was registered towards senescence. Catalase activity improved as the flower matures, but decreased prior to flower opening through senescence. The protein patterns from the tepal tissues resolved through electrophoresis showed a consistency in proteins upto the flower opening but a marginal decrease was registered in both high and low molecular weight proteins towards senescence. However, a protein of molecular weight 76.5 kDa showed up during senescent stages which may have a role in flower senescence.
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Affiliation(s)
- Syed Sabhi Ahmad
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Srinagar, 190006 India
| | - Inayatullah Tahir
- Plant Physiology and Biochemistry Research Laboratory, Department of Botany, University of Kashmir, Srinagar, 190006 India
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Cytoplasmic polyhedrosis virus-induced differential gene expression in two silkworm strains of different susceptibility. Gene 2014; 539:230-7. [DOI: 10.1016/j.gene.2014.01.073] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2013] [Revised: 01/14/2014] [Accepted: 01/27/2014] [Indexed: 01/02/2023]
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12
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Shahri W, Tahir I. Flower senescence: some molecular aspects. PLANTA 2014; 239:277-97. [PMID: 24178586 DOI: 10.1007/s00425-013-1984-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2012] [Accepted: 10/14/2013] [Indexed: 05/08/2023]
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13
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Agustí J, Gimeno J, Merelo P, Serrano R, Cercós M, Conesa A, Talón M, Tadeo FR. Early gene expression events in the laminar abscission zone of abscission-promoted citrus leaves after a cycle of water stress/rehydration: involvement of CitbHLH1. JOURNAL OF EXPERIMENTAL BOTANY 2012; 63:6079-91. [PMID: 23028022 PMCID: PMC3481208 DOI: 10.1093/jxb/ers270] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Leaf abscission is a common response of plants to drought stress. Some species, such as citrus, have evolved a specific behaviour in this respect, keeping their leaves attached to the plant body during water stress until this is released by irrigation or rain. This study successfully reproduced this phenomenon under controlled conditions (24h of water stress followed by 24h of rehydration) and used it to construct a suppression subtractive hybridization cDNA library enriched in genes involved in the early stages of rehydration-promoted leaf abscission after water stress. Sequencing of the library yielded 314 unigenes, which were spotted onto nylon membranes. Membrane hybridization with petiole (Pet)- and laminar abscission zone (LAZ)-enriched RNA samples corresponding to early steps in leaf abscission revealed an almost exclusive preferential gene expression programme in the LAZ. The data identified major processes such as protein metabolism, cell-wall modification, signalling, control of transcription and vesicle production, and transport as the main biological processes activated in LAZs during the early steps of rehydration-promoted leaf abscission after water stress. Based on these findings, a model for the early steps of citrus leaf abscission is proposed. In addition, it is suggested that CitbHLH1, the putative citrus orthologue of Arabidopsis BIGPETAL, may play major roles in the control of abscission-related events in citrus abscission zones.
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Affiliation(s)
- Javier Agustí
- Institut Valencià d’Investigacions Agràries (IVIA), Centre de Genómica. Apartat Oficial 46113, Montcada (València), Spain
| | - Jacinta Gimeno
- Instituto de Biología Molecular y Celular de Plantas (IBMCP). CSIC-Universidad Politécnica de Valencia. Avda. Tarongers s/n, 46022. Valencia, Spain
| | - Paz Merelo
- Institut Valencià d’Investigacions Agràries (IVIA), Centre de Genómica. Apartat Oficial 46113, Montcada (València), Spain
| | - Ramón Serrano
- Instituto de Biología Molecular y Celular de Plantas (IBMCP). CSIC-Universidad Politécnica de Valencia. Avda. Tarongers s/n, 46022. Valencia, Spain
| | - Manuel Cercós
- Institut Valencià d’Investigacions Agràries (IVIA), Centre de Genómica. Apartat Oficial 46113, Montcada (València), Spain
| | - Ana Conesa
- Institut Valencià d’Investigacions Agràries (IVIA), Centre de Genómica. Apartat Oficial 46113, Montcada (València), Spain
| | - Manuel Talón
- Institut Valencià d’Investigacions Agràries (IVIA), Centre de Genómica. Apartat Oficial 46113, Montcada (València), Spain
| | - Francisco R. Tadeo
- Institut Valencià d’Investigacions Agràries (IVIA), Centre de Genómica. Apartat Oficial 46113, Montcada (València), Spain
- § To whom correspondence should be addressed. E-mail:
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14
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Bar-Dror T, Dermastia M, Kladnik A, Žnidarič MT, Novak MP, Meir S, Burd S, Philosoph-Hadas S, Ori N, Sonego L, Dickman MB, Lers A. Programmed cell death occurs asymmetrically during abscission in tomato. THE PLANT CELL 2011; 23:4146-63. [PMID: 22128123 PMCID: PMC3246325 DOI: 10.1105/tpc.111.092494] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2011] [Revised: 10/11/2011] [Accepted: 11/17/2011] [Indexed: 05/03/2023]
Abstract
Abscission occurs specifically in the abscission zone (AZ) tissue as a natural stage of plant development. Previously, we observed delay of tomato (Solanum lycopersicum) leaf abscission when the LX ribonuclease (LX) was inhibited. The known association between LX expression and programmed cell death (PCD) suggested involvement of PCD in abscission. In this study, hallmarks of PCD were identified in the tomato leaf and flower AZs during the late stage of abscission. These included loss of cell viability, altered nuclear morphology, DNA fragmentation, elevated levels of reactive oxygen species and enzymatic activities, and expression of PCD-associated genes. Overexpression of antiapoptotic proteins resulted in retarded abscission, indicating PCD requirement. PCD, LX, and nuclease gene expression were visualized primarily in the AZ distal tissue, demonstrating an asymmetry between the two AZ sides. Asymmetric expression was observed for genes associated with cell wall hydrolysis, leading to AZ, or associated with ethylene biosynthesis, which induces abscission. These results suggest that different abscission-related processes occur asymmetrically between the AZ proximal and distal sides. Taken together, our findings identify PCD as a key mechanism that occurs asymmetrically during normal progression of abscission and suggest an important role for LX in this PCD process.
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Affiliation(s)
- Tal Bar-Dror
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food, and Environment, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Marina Dermastia
- Department of Biotechnology and Systems Biology, National Institute of Biology, SI-1000 Ljubljana, Slovenia
| | - Aleš Kladnik
- Department of Biology, Biotechnical Faculty, University of Ljubljana, SI-1000 Ljubljana, Slovenia
| | - Magda Tušek Žnidarič
- Department of Biotechnology and Systems Biology, National Institute of Biology, SI-1000 Ljubljana, Slovenia
| | - Maruša Pompe Novak
- Department of Biotechnology and Systems Biology, National Institute of Biology, SI-1000 Ljubljana, Slovenia
| | - Shimon Meir
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel
| | - Shaul Burd
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel
| | - Sonia Philosoph-Hadas
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel
| | - Naomi Ori
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Robert H. Smith Faculty of Agriculture, Food, and Environment, The Hebrew University of Jerusalem, Rehovot 76100, Israel
| | - Lilian Sonego
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel
| | - Martin B. Dickman
- Department of Plant Pathology and Microbiology, Institute for Plant Genomics and Biotechnology, Texas A&M University, College Station, Texas 77843
| | - Amnon Lers
- Department of Postharvest Science of Fresh Produce, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel
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15
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Pereira KRB, Botelho-Júnior S, Domingues DP, Machado OLT, Oliveira AEA, Fernandes KVS, Madureira HC, Pereira TNS, Jacinto T. Passion fruit flowers: Kunitz trypsin inhibitors and cystatin differentially accumulate in developing buds and floral tissues. PHYTOCHEMISTRY 2011; 72:1955-1961. [PMID: 21803382 DOI: 10.1016/j.phytochem.2011.06.009] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2010] [Revised: 05/06/2011] [Accepted: 06/27/2011] [Indexed: 05/31/2023]
Abstract
In order to better understand the physiological functions of protease inhibitors (PIs) the PI activity in buds and flower organs of passion fruit (Passiflora edulis Sims) was investigated. Trypsin and papain inhibitory activities were analyzed in soluble protein extracts from buds at different developmental stages and floral tissues in anthesis. These analyses identified high levels of inhibitory activity against both types of enzymes at all bud stages. Intriguingly, the inhibitory activity against both proteases differed remarkably in some floral tissues. While all organs tested were very effective against trypsin, only sepal and petal tissues exhibited strong inhibitory activity against papain. The sexual reproductive tissues (ovary, stigma-style and stamen) showed either significantly lower activity against papain or practically none. Gelatin-SDS-PAGE assay established that various trypsin inhibitors (TIs) homogenously accumulated in developing buds, although some were differentially present in floral organs. The N-terminal sequence analysis of purified inhibitors from stamen demonstrated they had homology to the Kunitz family of serine PIs. Western-blot analysis established presence of a ∼60 kDa cystatin, whose levels progressively increased during bud development. A positive correlation between this protein and strong papain inhibitory activity was observed in buds and floral tissues, except for the stigma-style. Differences in temporal and spatial accumulation of both types of PIs in passion fruit flowers are thus discussed in light of their potential roles in defense and development.
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Affiliation(s)
- Keitty R B Pereira
- Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia, Universidade Estadual do Norte Fluminense, 28013-602 Campos dos Goytacazes, RJ, Brazil
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16
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Singh AP, Tripathi SK, Nath P, Sane AP. Petal abscission in rose is associated with the differential expression of two ethylene-responsive xyloglucan endotransglucosylase/hydrolase genes, RbXTH1 and RbXTH2. JOURNAL OF EXPERIMENTAL BOTANY 2011; 62:5091-103. [PMID: 21765161 PMCID: PMC3193013 DOI: 10.1093/jxb/err209] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Abscission is a process that involves shedding of plant organs from the main plant body. In this study it is shown that the process of petal separation in the fragrant rose, Rosa bourboniana, is accompanied by the expression of two xyloglucan endotransglucosylase/hydrolase genes, RbXTH1 and RbXTH2. The sequences of the two genes show 52% amino acid identity but are conserved at the catalytic site. The genes are up-regulated soon after the initiation of the abscission process and their transcription is associated with the progression of abscission, being faster in ethylene-treated flowers but slower during field abscission. Transcription is ethylene responsive, with the ethylene response being tissue-specific for RbXTH1 but largely tissue-independent for RbXTH2. Expression is correlated with an increase in xyloglucan endotransglucosylase (XET) action in petal abscission zones of both ethylene-treated and field abscising flowers. Proximal promoters of both the genes drive β-glucuronidase expression in an ethylene-responsive and abscission-related manner in agrobacteria-infiltrated rose petals, indicating that cis-elements governing ethylene-responsive and abscission-related expression probably lie within the first 700 nucleotides upstream of the translational initiation codon. The results show that cell wall remodelling of the xyloglucan moieties through the XET action of XTHs may be important for cell separation during abscission.
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17
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Sytykiewicz H, Czerniewicz P, Sprawka I, Goławska S, Chrzanowski G, Leszczyński B. Induced proteolysis within the bird cherry leaves evoked by Rhopalosiphum padi L. (Hemiptera, Aphidoidea). ACTA BIOLOGICA HUNGARICA 2011; 62:316-27. [PMID: 21840833 DOI: 10.1556/abiol.62.2011.3.10] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The objectives of this study were to elucidate the impact of bird cherry-oat aphid (Rhopalosiphum padi L.) feeding on functioning of the proteolytic machinery in bird cherry leaves. Biochemical analyses proved that R. padi feeding in tissues of primary host stimulated activity of the two major fractions of proteinases (extracted at the optimal pH values: 5.0 and 7.0). Additionally, it has been demonstrated that aphids' feeding on bird cherry led to a decline in levels of albumins and globulins (main protein fractions in P. padus leaves). The opposite tendency, regarding the amounts of these protein fractions was ascertained at the phase of disappearance of R. padi population on tested shoots. Furthermore, it is reported that an increase in activity of the analysed enzymes and a decline in the content of tested protein fractions, were proportional to density of aphid individuals developing on P. padus side shoots. It is hypothesized that long-term R. padi feeding may lead to intensifying the catabolic processing of proteins by the activated proteolytic machinery in bird cherry leaves. The multi-level biological functions of endogenous plant proteinases and their significance in triggering the defense reactions in aphid-infested plant tissues are discussed.
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Affiliation(s)
- H Sytykiewicz
- Siedlce University of Natural Sciences and Humanities, Department of Biochemistry and Molecular Biology, Siedlce, Poland.
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18
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Singh RK, Ali SA, Nath P, Sane VA. Activation of ethylene-responsive p-hydroxyphenylpyruvate dioxygenase leads to increased tocopherol levels during ripening in mango. JOURNAL OF EXPERIMENTAL BOTANY 2011; 62:3375-85. [PMID: 21430290 PMCID: PMC3130165 DOI: 10.1093/jxb/err006] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2010] [Revised: 12/27/2010] [Accepted: 01/07/2011] [Indexed: 05/20/2023]
Abstract
Mango is characterized by high tocopherol and carotenoid content during ripening. From a cDNA screen of differentially expressing genes during mango ripening, a full-length p-hydroxyphenylpyruvate dioxygenase (MiHPPD) gene homologue was isolated that encodes a key enzyme in the biosynthesis of tocopherols. The gene encoded a 432-amino-acid protein. Transcript analysis during different stages of ripening revealed that the gene is ripening related and rapidly induced by ethylene. The increase in MiHPPD transcript accumulation was followed by an increase in tocopherol levels during ripening. The ripening-related increase in MiHPPD expression was also seen in response to abscisic acid and to alesser extent to indole-3-acetic acid. The expression of MiHPPD was not restricted to fruits but was also seen in other tissues such as leaves particularly during senescence. The strong ethylene induction of MiHPPD was also seen in young leaves indicating that ethylene induction of MiHPPD is tissue independent. Promoter analysis of MiHPPD gene in tomato discs and leaves of stable transgenic lines of Arabidopsis showed that the cis elements for ripening-related, ethylene-responsive, and senescence-related expression resided within the 1590 nt region upstream of the ATG codon. Functionality of the gene was demonstrated by the ability of the expressed protein in bacteria to convert p-hydroxyphenylpyruvate to homogentisate. These results provide the first evidence for HPPD expression during ripening of a climacteric fruit.
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Affiliation(s)
- Rajesh K. Singh
- Plant Gene Expression Laboratory, National Botanical Research Institute, CSIR, Lucknow 226001, India
| | | | - Pravendra Nath
- Plant Gene Expression Laboratory, National Botanical Research Institute, CSIR, Lucknow 226001, India
| | - Vidhu A. Sane
- Plant Gene Expression Laboratory, National Botanical Research Institute, CSIR, Lucknow 226001, India
- To whom correspondence should be addressed. E-mail:
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