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Chrisantus KM, Sarah C, Dorcas L, Ramkat RC, Oduori COA, Pili NN. Characterization of finger millet extracts and evaluation of their nematicidal efficacy and plant growth promotion potential. PLANT-ENVIRONMENT INTERACTIONS (HOBOKEN, N.J.) 2024; 5:e70006. [PMID: 39165797 PMCID: PMC11334166 DOI: 10.1002/pei3.70006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Revised: 06/09/2024] [Accepted: 08/02/2024] [Indexed: 08/22/2024]
Abstract
Plant-parasitic nematodes pose a significant threat to finger millet crops, potentially causing yield reduction of up to 70%. Extracts derived from finger millet varieties contain potent bioactive compounds that can mitigate nematode damage and promote plant growth. This study aimed at isolating and characterizing bioactive compounds from the finger millet varieties Ikhulule, Okhale-1, and U-15; evaluating the impact of Ikhulule and U-15 extracts on the mortality of the root lesion nematode Pratylenchus vandenbergae; assessing the growth promotion effects of Ikhulule and U-15 extracts on the finger millet variety Okhale-1; and determining the efficacy of these extracts in managing plant-parasitic nematodes under greenhouse conditions. Extracts were obtained from both leaves and roots and tested in vitro for nematode mortality and in vivo for growth promotion and nematode control. The results showed that finger millet extracts exhibited strong nematicidal properties in vitro, achieving a mortality rate of up to 98% against P. vandenbergae nematodes. Applying these extracts to finger millet shoots significantly reduced nematode populations in both soil and roots and decreased the reproductive factor to below one (1), indicating an effective nematode control. The study attributes the enhanced nematicidal effects of finger millet extracts to their bioactive compounds, particularly dodecanoic acid, phytol, 1,1,4a-trimethyl-6-decahydro naphthalene, 2,3-dihydro-benzofuran, 2-methoxy-4-vinylphenol and ethyl ester, and hexadecanoic acid. These findings suggest that finger millet-derived extracts offer a natural solution for nematode management and broader agronomic benefits, ultimately contributing to overall plant health and productivity.
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Affiliation(s)
| | - Chepkwony Sarah
- Department of Chemistry and BiochemistryMoi UniversityEldoretKenya
| | - Lusweti Dorcas
- Department of Biological SciencesMoi UniversityEldoretKenya
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Yang ZY, Dai YC, Mo YQ, Wang JL, Ma L, Zhao PJ, Huang Y, Wang RB, Li W, Al-Rejaie SS, Liu JJ, Cao Y, Mo MH. Exploring the nematicidal mechanisms and control efficiencies of oxalic acid producing Aspergillus tubingensis WF01 against root-knot nematodes. Front Microbiol 2024; 15:1424758. [PMID: 39040900 PMCID: PMC11260745 DOI: 10.3389/fmicb.2024.1424758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2024] [Accepted: 06/20/2024] [Indexed: 07/24/2024] Open
Abstract
Background and aims Root-knot nematodes (RKN; Meloidogyne spp.) are among the highly prevalent and significantly detrimental pathogens that cause severe economic and yield losses in crops. Currently, control of RKN primarily relies on the application of chemical nematicides but it has environmental and public health concerns, which open new doors for alternative methods in the form of biological control. Methods In this study, we investigated the nematicidal and attractive activities of an endophytic strain WF01 against Meloidogyne incognita in concentration-dependent experiments. The active nematicidal metabolite was extracted in the WF01 crude extract through the Sephadex column, and its structure was identified by nuclear magnetic resonance and mass spectrometry data. Results The strain WF01 was identified as Aspergillus tubingensis based on morphological and molecular characteristics. The nematicidal and attractive metabolite of A. tubingensis WF01 was identified as oxalic acid (OA), which showed solid nematicidal activity against M. incognita, having LC50 of 27.48 μg ml-1. The Nsy-1 of AWC and Odr-7 of AWA were the primary neuron genes for Caenorhabditis elegans to detect OA. Under greenhouse, WF01 broth and 200 μg ml-1 OA could effectively suppress the disease caused by M. incognita on tomatoes respectively with control efficiency (CE) of 62.5% and 70.83%, and promote plant growth. In the field, WF01-WP and 8% OA-WP formulations showed moderate CEs of 51.25%-61.47% against RKN in tomato and tobacco. The combined application of WF01 and OA resulted in excellent CEs of 66.83% and 69.34% toward RKN in tomato and tobacco, respectively. Furthermore, the application of WF01 broth or OA significantly suppressed the infection of J2s in tomatoes by upregulating the expression levels of the genes (PAL, C4H, HCT, and F5H) related to lignin synthesis, and strengthened root lignification. Conclusion Altogether, our results demonstrated that A. tubingensis WF01 exhibited multiple weapons to control RKN mediated by producing OA to lure and kill RKN in a concentration-dependent manner and strengthen root lignification. This fungus could serve as an environmental bio-nematicide for managing the diseases caused by RKN.
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Affiliation(s)
- Zhong-Yan Yang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
| | - Yuan-Chen Dai
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
| | - Yuan-Qi Mo
- Institute of Crop Variety Resources, Guizhou Academy of Agricultural Sciences, Guiyang, China
| | - Jia-Lun Wang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
| | - Li Ma
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
| | - Pei-Ji Zhao
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
| | - Ying Huang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
| | - Rui-Bin Wang
- Shandong Dianlu Biotechnology Co., Ltd., Feixian, China
| | - Wei Li
- Yunnan Boshiao Biotechnology Co., Ltd., Kunming, China
| | - Salim S. Al-Rejaie
- Department of Pharmacology and Toxicology, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia
| | - Jian-Jin Liu
- Pu’er Corporation of Yunnan Tobacco Corporation, Pu’er, China
| | - Yi Cao
- Guizhou Academy of Tobacco Agricultural Sciences, Guiyang, China
| | - Ming-He Mo
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China
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Kamaraju D, Chatterjee M, Papolu PK, Shivakumara TN, Sreevathsa R, Hada A, Rao U. Host-induced RNA interference targeting the neuromotor gene FMRFamide-like peptide-14 (Mi-flp14) perturbs Meloidogyne incognita parasitic success in eggplant. PLANT CELL REPORTS 2024; 43:178. [PMID: 38907748 DOI: 10.1007/s00299-024-03259-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 06/04/2024] [Indexed: 06/24/2024]
Abstract
KEY MESSAGE The study demonstrates the successful management of Meloidogyne incognita in eggplant using Mi-flp14 RNA interference, showing reduced nematode penetration and reproduction without off-target effects across multiple generations. Root-knot nematode, Meloidogyne incognita, causes huge yield losses worldwide. Neuromotor function in M. incognita governed by 19 neuropeptides is vital for parasitism and parasite biology. The present study establishes the utility of Mi-flp14 for managing M. incognita in eggplant in continuation of our earlier proof of concept in tobacco (US patent US2015/0361445A1). Mi-flp14 hairpin RNA construct was used for generating 19 independent transgenic eggplant events. PCR and Southern hybridization analysis confirmed transgene integration and its orientation, while RT-qPCR and Northern hybridization established the generation of dsRNA and siRNA of Mi-flp14. In vitro and in vivo bio-efficacy analysis of single-copy events against M. incognita showed reduced nematode penetration and development at various intervals that negatively impacted reproduction. Interestingly, M. incognita preferred wild-type plants over the transgenics even when unbiased equal opportunity was provided for the infection. A significant reduction in disease parameters was observed in transgenic plants viz., galls (40-48%), females (40-50%), egg masses (35-40%), eggs/egg mass (50-55%), and derived multiplication factor (60-65%) compared to wild type. A unique demonstration of perturbed expression of Mi-flp14 in partially penetrated juveniles and female nematodes established successful host-mediated RNAi both at the time of penetration even before the nematodes started withdrawing plant nutrients and later stage, respectively. The absence of off-target effects in transgenic plants was supported by the normal growth phenotype of the plants and T-DNA integration loci. Stability in the bio-efficacy against M. incognita across T1- to T4-generation transgenic plants established the utility of silencing Mi-flp14 for nematode management. This study demonstrates the significance of targeting Mi-flp14 in eggplant for nematode management, particularly to address global agricultural challenges posed by M. incognita.
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Affiliation(s)
- Divya Kamaraju
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
- School of Biotechnology, Kalinga Institute of Industrial Technology, Bhubaneswar, 751024, India
| | - Madhurima Chatterjee
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Pradeep K Papolu
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India
| | | | - Rohini Sreevathsa
- ICAR-National Institute for Plant Biotechnology, New Delhi, 110012, India
| | - Alkesh Hada
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
- Department of Entomology, Nematology and Chemistry Units, Agricultural Research Organization (ARO), The Volcani Center, 7505101, Bet Dagan, Israel.
| | - Uma Rao
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
- Engrave Biolabs Pvt Ltd. , Shanthipuram, Kukatpally, Hyderabad, 500072, India.
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Liu Z, Ying J, Liu C. Changes in Rhizosphere Soil Microorganisms and Metabolites during the Cultivation of Fritillaria cirrhosa. BIOLOGY 2024; 13:334. [PMID: 38785816 PMCID: PMC11117757 DOI: 10.3390/biology13050334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Revised: 05/07/2024] [Accepted: 05/08/2024] [Indexed: 05/25/2024]
Abstract
Fritillaria cirrhosa is an important cash crop, and its industrial development is being hampered by continuous cropping obstacles, but the composition and changes of rhizosphere soil microorganisms and metabolites in the cultivation process of Fritillaria cirrhosa have not been revealed. We used metagenomics sequencing to analyze the changes of the microbiome in rhizosphere soil during a three-year cultivation process, and combined it with LC-MS/MS to detect the changes of metabolites. Results indicate that during the cultivation of Fritillaria cirrhosa, the composition and structure of the rhizosphere soil microbial community changed significantly, especially regarding the relative abundance of some beneficial bacteria. The abundance of Bradyrhizobium decreased from 7.04% in the first year to about 5% in the second and third years; the relative abundance of Pseudomonas also decreased from 6.20% in the first year to 2.22% in the third year; and the relative abundance of Lysobacter decreased significantly from more than 4% in the first two years of cultivation to 1.01% in the third year of cultivation. However, the relative abundance of some harmful fungi has significantly increased, such as Botrytis, which increased significantly from less than 3% in the first two years to 7.93% in the third year, and Talaromyces fungi, which were almost non-existent in the first two years of cultivation, significantly increased to 3.43% in the third year of cultivation. The composition and structure of Fritillaria cirrhosa rhizosphere metabolites also changed significantly, the most important of which were carbohydrates represented by sucrose (48.00-9.36-10.07%) and some amino acid compounds related to continuous cropping obstacles. Co-occurrence analysis showed that there was a significant correlation between differential microorganisms and differential metabolites, but Procrustes analysis showed that the relationship between bacteria and metabolites was closer than that between fungi and metabolites. In general, in the process of Fritillaria cirrhosa cultivation, the beneficial bacteria in the rhizosphere decreased, the harmful bacteria increased, and the relative abundance of carbohydrate and amino acid compounds related to continuous cropping obstacles changed significantly. There is a significant correlation between microorganisms and metabolites, and the shaping of the Fritillaria cirrhosa rhizosphere's microecology by bacteria is more relevant.
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Affiliation(s)
- Zhixiang Liu
- Institute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China
| | - Jizhe Ying
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan 430065, China;
| | - Chengcheng Liu
- Institute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China
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Afridi MS, Kumar A, Javed MA, Dubey A, de Medeiros FHV, Santoyo G. Harnessing root exudates for plant microbiome engineering and stress resistance in plants. Microbiol Res 2024; 279:127564. [PMID: 38071833 DOI: 10.1016/j.micres.2023.127564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 11/02/2023] [Accepted: 11/27/2023] [Indexed: 12/23/2023]
Abstract
A wide range of abiotic and biotic stresses adversely affect plant's growth and production. Under stress, one of the main responses of plants is the modulation of exudates excreted in the rhizosphere, which consequently leads to alterations in the resident microbiota. Thus, the exudates discharged into the rhizospheric environment play a preponderant role in the association and formation of plant-microbe interactions. In this review, we aimed to provide a synthesis of the latest and most pertinent literature on the diverse biochemical and structural compositions of plant root exudates. Also, this work investigates into their multifaceted role in microbial nutrition and intricate signaling processes within the rhizosphere, which includes quorum-sensing molecules. Specifically, it explores the contributions of low molecular weight compounds, such as carbohydrates, phenolics, organic acids, amino acids, and secondary metabolites, as well as the significance of high molecular weight compounds, including proteins and polysaccharides. It also discusses the state-of-the-art omics strategies that unveil the vital role of root exudates in plant-microbiome interactions, including defense against pathogens like nematodes and fungi. We propose multiple challenges and perspectives, including exploiting plant root exudates for host-mediated microbiome engineering. In this discourse, root exudates and their derived interactions with the rhizospheric microbiota should receive greater attention due to their positive influence on plant health and stress mitigation.
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Affiliation(s)
- Muhammad Siddique Afridi
- Department of Plant Pathology, Federal University of Lavras, CP3037, 37200-900 Lavras, MG, Brazil.
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, MP, India
| | - Muhammad Ammar Javed
- Institute of Industrial Biotechnology, Government College University, Lahore 54000, Pakistan
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, MP, India
| | | | - Gustavo Santoyo
- Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, 58030 Morelia, Mexico.
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Zhang X, Song M, Gao L, Tian Y. Metabolic variations in root tissues and rhizosphere soils of weak host plants potently lead to distinct host status and chemotaxis regulation of Meloidogyne incognita in intercropping. MOLECULAR PLANT PATHOLOGY 2024; 25:e13396. [PMID: 37823341 PMCID: PMC10782644 DOI: 10.1111/mpp.13396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 09/25/2023] [Accepted: 09/25/2023] [Indexed: 10/13/2023]
Abstract
Root-knot nematodes (RKNs) inflict extensive damage to global agricultural production. Intercropping has been identified as a viable agricultural tool for combating RKNs, but the mechanisms by which intercropped plants modulate RKN parasitism are still not well understood. Here, we focus on the cucumber-amaranth intercropping system. We used a range of approaches, including the attraction assay, in vitro RNA interference (RNAi), untargeted metabolomics, and hairy root transformation, to unveil the mechanisms by which weak host plants regulate Meloidogyne incognita chemotaxis towards host plants and control infection. Amaranth roots showed a direct repellence to M. incognita through disrupting its chemotaxis. The in vitro RNAi assay demonstrated that the Mi-flp-1 and Mi-flp-18 genes (encoding FMRFamide-like peptides) regulated M. incognita chemotaxis towards cucumber and controlled infection. Moreover, M. incognita infection stimulated cucumber and amaranth to accumulate distinct metabolites in both root tissues and rhizosphere soils. In particular, naringenin and salicin, enriched specifically in amaranth rhizosphere soils, inhibited the expression of Mi-flp-1 and Mi-flp-18. In addition, overexpression of genes involved in the biosynthesis of pantothenic acid and phloretin, both of which were enriched specifically in amaranth root tissues, delayed M. incognita development in cucumber hairy roots. Together, our results reveal that both the distinct host status and disruption of chemotaxis contribute to M. incognita inhibition in intercropping.
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Affiliation(s)
- Xu Zhang
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of HorticultureChina Agricultural UniversityBeijingChina
| | - Mengyuan Song
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of HorticultureChina Agricultural UniversityBeijingChina
| | - Lihong Gao
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of HorticultureChina Agricultural UniversityBeijingChina
| | - Yongqiang Tian
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of HorticultureChina Agricultural UniversityBeijingChina
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Zhao Y, Zhong C, Li Y, Zhou W, Huang X. Novel Genes and Key Signaling Molecules Involved in the Repulsive Response of Meloidogyne incognita against Biocontrol Bacteria. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:19445-19456. [PMID: 38033160 DOI: 10.1021/acs.jafc.3c06074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2023]
Abstract
The ability of the model organism, Caenorhabditis elegans, to distinguish and escape from pathogenic bacteria has been extensively studied; however, studies on the repulsive response of Meloidogyne incognita are still in their infancy. We have recently demonstrated that biocontrol bacteria induce a repulsive response in M. incognita via two classical signaling pathways. The present study aimed to identify the novel genes and signaling molecules of M. incognita that potentially contribute to its defense reaction. Analysis of the transcriptome data of M. incognita with and without a repulsive response against Bacillus nematocida B16 obtained 15 candidate genes, of which the novel genes Minc3s01748g26034 and Minc3s02548g30585 were found to regulate the aversive behavior of M. incognita, and their functions were further validated. To further confirm the neuronal localization of the two novel genes in M. incognita, in situ hybridization was conducted using the digoxin-labeled probes of ten tag genes, and preferentially profiled the localization of amphid sensory neurons of M. incognita. Analysis of the overviewed neuronal map suggested that Minc3s01748g26034 and Minc3s02548g30585 functioned in ASK/ASI and CEPD/V neurons, respectively. During their interactions, the volatile compounds 3-methyl-butyric acid and 2-methyl-butyric acid produced by the biocontrol bacteria were predicted as the primary signaling molecules that promoted the repulsive behavior of M. incognita against biocontrol bacteria. The findings provided novel insights into the mechanisms underlying the repulsive response of M. incognita that are different from the canonical molecular pathways previously found in C. elegans and can aid in developing novel strategies for controlling root-knot nematodes.
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Affiliation(s)
- Yanli Zhao
- School of Medicine, and State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming 650091, China
- Medicinal Plants Research Institute, Yunnan Academy of Agricultural Sciences, Kunming 650200, China
| | - Chidi Zhong
- School of Medicine, and State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming 650091, China
| | - Yixin Li
- School of Medicine, and State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming 650091, China
| | - Wenhui Zhou
- School of Medicine, and State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming 650091, China
| | - Xiaowei Huang
- School of Medicine, and State Key Laboratory for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming 650091, China
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Jiang Y, Huang M, Qin R, Jiang D, Chang D, Xie Y, Li C, Wang C. Full-Length Transcriptome Analysis of Soybean Cyst Nematode ( Heterodera glycines) Reveals an Association of Behaviors in Response to Attractive pH and Salt Solutions with Activation of Transmembrane Receptors, Ion Channels, and Ca 2+ Transporters. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023. [PMID: 37267587 DOI: 10.1021/acs.jafc.3c00908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Soybean cyst nematode (Heterodera glycines Ichinohe), a devastating pathogen in soybean, was chosen as a model system to investigate nematode behavior and gene expression changes in response to acidic and basic pH and salt signals (pH 4.5, 5.25, 8.6, and 10 and NaCl) through full-length transcriptome sequencing of 18 samples. An average of 4.36 Gbp of clean reads per sample were generated, and 3972 novel genes and 29,529 novel transcripts were identified. Sequence structural variation during or after transcription may be associated with the nematode's behavioral response. The functional analysis of 1817/4962 differentially expressed genes/transcripts showed that signal transduction pathways, including transmembrane receptors, ion channels, and Ca2+ transporters, were activated, but pathways involved in nematode development (e.g., ribosome) and energy production (e.g., oxidative phosphorylation) were inhibited. A corresponding model was established. Our findings suggest that these receptors and ion channels might be potential targets for nematicides or drug discovery.
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Affiliation(s)
- Ye Jiang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Minghui Huang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
| | - Ruifeng Qin
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Dan Jiang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Doudou Chang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Yifan Xie
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Chunjie Li
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
| | - Congli Wang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, 150081 Heilongjiang, P. R. China
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Zhang B, Du H, Yang S, Wu X, Liu W, Guo J, Xiao Y, Peng F. Physiological and Transcriptomic Analyses of the Effects of Exogenous Lauric Acid on Drought Resistance in Peach ( Prunus persica (L.) Batsch). PLANTS (BASEL, SWITZERLAND) 2023; 12:1492. [PMID: 37050118 PMCID: PMC10097042 DOI: 10.3390/plants12071492] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 03/21/2023] [Accepted: 03/23/2023] [Indexed: 06/19/2023]
Abstract
Peach (Prunus persica (L.) Batsch) is a fruit tree of economic and nutritional importance, but it is very sensitive to drought stress, which affects its growth to a great extent. Lauric acid (LA) is a fatty acid produced in plants and associated with the response to abiotic stress, but the underlying mechanism remains unclear. In this study, physiological analysis showed that 50 ppm LA pretreatment under drought stress could alleviate the growth of peach seedlings. LA inhibits the degradation of photosynthetic pigments and the closing of pores under drought stress, increasing the photosynthetic rate. LA also reduces the content of O2-, H2O2, and MDA under drought stress; our results were confirmed by Evans Blue, nitroblue tetrazolium (NBT), and DAB(3,3-diaminobenzidine) staining experiments. It may be that, by directly removing reactive oxygen species (ROS) and improving enzyme activity, i.e., catalase (CAT) activity, peroxidase (POD) activity, superoxide dismutase (SOD) activity, and ascorbate peroxidase (APX) activity, the damage caused by reactive oxygen species to peach seedlings is reduced. Peach seedlings treated with LA showed a significant increase in osmoregulatory substances compared with those subjected to drought stress, thereby regulating osmoregulatory balance and reducing damage. RNA-Seq analysis identified 1876 DEGs (differentially expressed genes) in untreated and LA-pretreated plants under drought stress. In-depth analysis of these DEGs showed that, under drought stress, LA regulates the expression of genes related to plant-pathogen interaction, phenylpropanoid biosynthesis, the MAPK signaling pathway, cyanoamino acid metabolism, and sesquiterpenoid and triterpenoid biosynthesis. In addition, LA may activate the Ca2+ signaling pathway by increasing the expressions of CNGC, CAM/CML, and CPDK family genes, thereby improving the drought resistance of peaches. In summary, via physiological and transcriptome analyses, the mechanism of action of LA in drought resistance has been revealed. Our research results provide new insights into the molecular regulatory mechanism of the LA-mediated drought resistance of peach trees.
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Affiliation(s)
| | | | | | | | | | | | - Yuansong Xiao
- Correspondence: (Y.X.); (F.P.); Tel.: +86-151-6387-3786 (Y.X.); +86-135-6382-1651 (F.P.)
| | - Futian Peng
- Correspondence: (Y.X.); (F.P.); Tel.: +86-151-6387-3786 (Y.X.); +86-135-6382-1651 (F.P.)
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10
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Naik B, Kumar V, Rizwanuddin S, Chauhan M, Choudhary M, Gupta AK, Kumar P, Kumar V, Saris PEJ, Rather MA, Bhuyan S, Neog PR, Mishra S, Rustagi S. Genomics, Proteomics, and Metabolomics Approaches to Improve Abiotic Stress Tolerance in Tomato Plant. Int J Mol Sci 2023; 24:3025. [PMID: 36769343 PMCID: PMC9918255 DOI: 10.3390/ijms24033025] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 01/30/2023] [Accepted: 02/01/2023] [Indexed: 02/09/2023] Open
Abstract
To explore changes in proteins and metabolites under stress circumstances, genomics, proteomics, and metabolomics methods are used. In-depth research over the previous ten years has gradually revealed the fundamental processes of plants' responses to environmental stress. Abiotic stresses, which include temperature extremes, water scarcity, and metal toxicity brought on by human activity and urbanization, are a major cause for concern, since they can result in unsustainable warming trends and drastically lower crop yields. Furthermore, there is an emerging reliance on agrochemicals. Stress is responsible for physiological transformations such as the formation of reactive oxygen, stomatal opening and closure, cytosolic calcium ion concentrations, metabolite profiles and their dynamic changes, expression of stress-responsive genes, activation of potassium channels, etc. Research regarding abiotic stresses is lacking because defense feedbacks to abiotic factors necessitate regulating the changes that activate multiple genes and pathways that are not properly explored. It is clear from the involvement of these genes that plant stress response and adaptation are complicated processes. Targeting the multigenicity of plant abiotic stress responses caused by genomic sequences, transcripts, protein organization and interactions, stress-specific and cellular transcriptome collections, and mutant screens can be the first step in an integrative approach. Therefore, in this review, we focused on the genomes, proteomics, and metabolomics of tomatoes under abiotic stress.
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Affiliation(s)
- Bindu Naik
- Department of Food Science and Technology, Graphic Era (Deemed to Be) University, Bell Road, Clement Town, Dehradun 248002, Uttarakhand, India
| | - Vijay Kumar
- Himalayan School of Biosciences, Swami Rama Himalayan University, Swami Rama Nagar, Jolly Grant, Dehradun 248014, Uttarakhand, India
| | - Sheikh Rizwanuddin
- Department of Life Sciences, Graphic Era (Deemed to Be) University, Bell Road, Clement Town, Dehradun 248002, Uttarakhand, India
| | - Mansi Chauhan
- Department of Life Sciences, Graphic Era (Deemed to Be) University, Bell Road, Clement Town, Dehradun 248002, Uttarakhand, India
| | - Megha Choudhary
- Himalayan School of Biosciences, Swami Rama Himalayan University, Swami Rama Nagar, Jolly Grant, Dehradun 248014, Uttarakhand, India
| | - Arun Kumar Gupta
- Department of Food Science and Technology, Graphic Era (Deemed to Be) University, Bell Road, Clement Town, Dehradun 248002, Uttarakhand, India
| | - Pankaj Kumar
- Department of Microbiology, Dolphin (PG) Institute of Biomedical and Natural Sciences, Dehradun 248007, Uttarakhand, India
| | - Vivek Kumar
- Himalayan School of Biosciences, Swami Rama Himalayan University, Swami Rama Nagar, Jolly Grant, Dehradun 248014, Uttarakhand, India
| | - Per Erik Joakim Saris
- Department of Microbiology, Faculty of Agriculture and Forestry, University of Helsinki, FI-00014 Helsinki, Finland
| | - Muzamil Ahmad Rather
- Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur 784028, Assam, India
| | - Shuvam Bhuyan
- Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur 784028, Assam, India
| | - Panchi Rani Neog
- Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur 784028, Assam, India
| | - Sadhna Mishra
- Faculty of Agricultural Sciences, GLA University, Mathura 281406, Uttar Pradesh, India
| | - Sarvesh Rustagi
- Department of Food Technology, Uttaranchal University, Dehradun 248007, Uttarakhand, India
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11
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El-Sayed MH, Alshammari FA, Sharaf MH. Antagonistic Potentiality of Actinomycete-Derived Extract with Anti-Biofilm, Antioxidant, and Cytotoxic Capabilities as a Natural Combating Strategy for Multidrug-Resistant ESKAPE Pathogens. J Microbiol Biotechnol 2023; 33:61-74. [PMID: 36597590 PMCID: PMC9896001 DOI: 10.4014/jmb.2211.11026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 12/06/2022] [Accepted: 12/16/2022] [Indexed: 01/05/2023]
Abstract
The global increase in multidrug-resistant (MDR) bacteria has inspired researchers to develop new strategies to overcome this problem. In this study, 23 morphologically different, soil-isolated actinomycete cultures were screened for their antibacterial ability against MDR isolates of ESKAPE pathogens. Among them, isolate BOGE18 exhibited a broad antibacterial spectrum, so it was selected and identified based on cultural, morphological, physiological, and biochemical characteristics. Chemotaxonomic analysis was also performed together with nucleotide sequencing of the 16S rRNA gene, which showed this strain to have identity with Streptomyces lienomycini. The ethyl acetate extract of the cell-free filtrate (CFF) of strain BOGE18 was evaluated for its antibacterial spectrum, and the minimum inhibitory concentration (MIC) ranged from 62.5 to 250 μg/ml. The recorded results from the in vitro anti-biofilm microtiter assay and confocal laser scanning microscopy (CLSM) of sub-MIC concentrations revealed a significant reduction in biofilm formation in a concentration-dependent manner. The extract also displayed significant scavenging activity, reaching 91.61 ± 4.1% and 85.06 ± 3.14% of 2,2-diphenyl-1-picrylhydrazyl (DPPH) and 2,2'-azino-bis( 3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), respectively. A promising cytotoxic ability against breast (MCF-7) and hepatocellular (HePG2) cancer cell lines was obtained from the extract with IC50 values of 47.15 ± 13.10 and 122.69 ± 9.12 μg/ml, respectively. Moreover, based on gas chromatography-mass spectrometry (GC-MS) analysis, nine known compounds were detected in the BOGE18 extract, suggesting their contribution to the multitude of biological activities recorded in this study. Overall, Streptomyces lienomycini BOGE18-derived extract is a good candidate for use in a natural combating strategy to prevent bacterial infection, especially by MDR pathogens.
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Affiliation(s)
- Mohamed H. El-Sayed
- Department of Biology, College of Science and Arts, Northern Border University, Saudi Arabia,Department of Botany and Microbiology, Faculty of Science, Al-Azhar University, Cairo 11884, Egypt,Corresponding author Phone: +20 111 91 070 44 E-mail:
| | - Fahdah A. Alshammari
- Department of Biology, College of Science and Arts, Northern Border University, Saudi Arabia
| | - Mohammed H. Sharaf
- Department of Botany and Microbiology, Faculty of Science, Al-Azhar University, Cairo 11884, Egypt
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12
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Oota M, Toyoda S, Kotake T, Wada N, Hashiguchi M, Akashi R, Ishikawa H, Favery B, Tsai AYL, Sawa S. Rhamnogalacturonan-I as a nematode chemoattractant from Lotus corniculatus L. super-growing root culture. FRONTIERS IN PLANT SCIENCE 2023; 13:1008725. [PMID: 36777533 PMCID: PMC9908596 DOI: 10.3389/fpls.2022.1008725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 12/29/2022] [Indexed: 06/18/2023]
Abstract
INTRODUCTION The soil houses a tremendous amount of micro-organisms, many of which are plant parasites and pathogens by feeding off plant roots for sustenance. Such root pathogens and parasites often rely on plant-secreted signaling molecules in the rhizosphere as host guidance cues. Here we describe the isolation and characterization of a chemoattractant of plant-parasitic root-knot nematodes (Meloidogyne incognita, RKN). METHODS The Super-growing Root (SR) culture, consisting of excised roots from the legume species Lotus corniculatus L., was found to strongly attract infective RKN juveniles and actively secrete chemoattractants into the liquid culture media. The chemo-attractant in the culture media supernatant was purified using hydrophobicity and anion exchange chromatography, and found to be enriched in carbohydrates. RESULTS Monosaccharide analyses suggest the chemo-attractant contains a wide array of sugars, but is enriched in arabinose, galactose and galacturonic acid. This purified chemoattractant was shown to contain pectin, specifically anti-rhamnogalacturonan-I and anti-arabinogalactan protein epitopes but not anti-homogalacturonan epitopes. More importantly, the arabinose and galactose sidechain groups were found to be essential for RKN-attracting activities. This chemo-attractant appears to be specific to M. incognita, as it wasn't effective in attracting other Meloidogyne species nor Caenorhabditis elegans. DISCUSSION This is the first report to identify the nematode attractant purified from root exudate of L corniculatus L. Our findings re-enforce pectic carbohydrates as important chemicals mediating micro-organism chemotaxis in the soil, and also highlight the unexpected utilities of the SR culture system in root pathogen research.
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Affiliation(s)
- Morihiro Oota
- Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
| | - Syuuto Toyoda
- Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
| | - Toshihisa Kotake
- Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan
| | - Naoki Wada
- Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
| | | | - Ryo Akashi
- Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan
| | - Hayato Ishikawa
- Graduate School of Pharmaceutical Sciences, Chiba University, Chiba, Japan
| | - Bruno Favery
- Institut national de recherche pour l'agriculture, l'alimentation et l’environnement (INRAE), Université Côte d’Azur, CNRS, UMR 1355-7254 Institut Sophia Agrobiotech, Sophia Antipolis, France
- International Research Organization for Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
| | - Allen Yi-Lun Tsai
- Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
- International Research Center for Agricultural and Environmental Biology, Kumamoto University, Kumamoto, Japan
| | - Shinichiro Sawa
- Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
- International Research Center for Agricultural and Environmental Biology, Kumamoto University, Kumamoto, Japan
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13
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Li Y, Ren Q, Bo T, Mo M, Liu Y. AWA and ASH Homologous Sensing Genes of Meloidogyne incognita Contribute to the Tomato Infection Process. Pathogens 2022; 11:pathogens11111322. [PMID: 36365073 PMCID: PMC9693415 DOI: 10.3390/pathogens11111322] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 11/07/2022] [Accepted: 11/07/2022] [Indexed: 11/12/2022] Open
Abstract
The AWA neurons of Caenorhabditis elegans mainly perceive volatile attractive odors, while the ASH neurons perceive pH, penetration, nociception, odor tropism, etc. The perceptual neurons of Meloidogyne incognita have been little studied. The number of infestations around and within tomato roots was significantly reduced after RNA interference for high-homology genes in AWA and ASH neurons compared between M. incognita and C. elegans. Through in situ hybridization, we further determined the expression and localization of the homologous genes Mi-odr-10 and Mi-gpa-6 in M. incognita. In this study, we found that M. incognita has neuronal sensing pathways similar to AWA and ASH perception of C. elegans for sensing chemical signals from tomato roots. Silencing the homologous genes in these pathways could affect the nematode perception and infestation of tomato root systems. The results contribute to elucidating the process of the plant host perception of M. incognita.
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Affiliation(s)
| | | | | | | | - Yajun Liu
- Correspondence: ; Tel.: +86-871-65031093
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14
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Zhao Y, Zhou Q, Zou C, Zhang K, Huang X. Repulsive response of Meloidogyne incognita induced by biocontrol bacteria and its effect on interspecific interactions. Front Microbiol 2022; 13:994941. [PMID: 36187996 PMCID: PMC9520663 DOI: 10.3389/fmicb.2022.994941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 08/22/2022] [Indexed: 11/13/2022] Open
Abstract
The aversive behavior of Caenorhabditis elegans is an important strategy that increases their survival under pathogen infection, and the molecular mechanisms underlying this behavior have been described. However, whether this defensive response occurs in plant-parasitic nematodes (PPNs), which have quite different life cycles and genomic sequences from the model nematode, against biocontrol microbes and affects interspecific interactions in ecological environments remains unclear. Here, we showed that Meloidogyne incognita, one of the most common PPNs, engaged in lawn-leaving behavior in response to biocontrol bacteria such as Bacillus nematocida B16 and B. thuringiensis Bt79. Genomic analysis revealed that the key genes responsible for the aversive behavior of C. elegans, such as serotonin-and TGF-β-related genes in canonical signaling pathways, were homologous to those of M. incognita, and the similarity between these sequences ranged from 30% to 67%. Knockdown of the homologous genes impaired avoidance of M. incognita to varying degrees. Calcium ion imaging showed that the repulsive response requires the involvement of the multiple amphid neurons of M. incognita. In situ hybridization specifically localized Mi-tph-1 of the serotonin pathway to ADF/NSM neurons and Mi-dbl-1 of the TGF-β pathway to AVA neurons. Our data suggested that the repulsive response induced by different biocontrol bacteria strongly suppresses the invasion of tomato host plants by M. incognita. Overall, our study is the first to clarify the pathogen-induced repulsive response of M. incognita and elucidate its underlying molecular mechanisms. Our findings provide new insights into interspecific interactions among biocontrol bacteria, PPNs, and host plants.
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Affiliation(s)
- Yanli Zhao
- State Key Laboratory for Conservation and Utilization of Bio-Resources, and College of Life Science, Yunnan University, Kunming, China
- Institute of Medicinal Plants, Yunnan Academy of Agricultural Sciences, Kunming, China
| | - Qinying Zhou
- State Key Laboratory for Conservation and Utilization of Bio-Resources, and College of Life Science, Yunnan University, Kunming, China
| | - Chenggang Zou
- State Key Laboratory for Conservation and Utilization of Bio-Resources, and College of Life Science, Yunnan University, Kunming, China
| | - Keqin Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources, and College of Life Science, Yunnan University, Kunming, China
| | - Xiaowei Huang
- State Key Laboratory for Conservation and Utilization of Bio-Resources, and College of Life Science, Yunnan University, Kunming, China
- School of Medicine, Yunnan University, Kunming, China
- *Correspondence: Xiaowei Huang,
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15
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Chadfield VGA, Hartley SE, Redeker KR. Associational resistance through intercropping reduces yield losses to soil-borne pests and diseases. THE NEW PHYTOLOGIST 2022; 235:2393-2405. [PMID: 35678712 PMCID: PMC9545407 DOI: 10.1111/nph.18302] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Accepted: 05/03/2022] [Indexed: 05/07/2023]
Abstract
Associational resistance to herbivore and pathogen attack is a well documented ecological phenomenon and, if applied to agriculture, may reduce impact of pests and diseases on crop yields without recourse to pesticides. The value of associational resistance through intercropping, planting multiple crops alongside each other, as a sustainable control method remains unclear, due to variable outcomes reported in the published literature. We performed a meta-analysis to provide a quantitative assessment of benefits of intercropping for target plant resistance to plant-parasitic nematodes and soil-borne diseases. We found that intercropping reduced damage to focal crops from nematodes by 40% and disease incidence by 55%. Intercropping efficacy varied with biological variables, such as field fertilisation status and intercrop family, and methodology, including whether study samples were potted or in fields. Nematode control using intercropping was sufficient to offset reductions in focal crop yield from intercrop presence, making intercropping a viable agricultural tool. We identify key drivers for underpinning the success of intercropping and indicate areas for future research to improve efficacy. This study also highlights the potential benefits of harnessing ecological knowledge on plant-enemy interactions for improving agricultural and landscape sustainability.
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Affiliation(s)
| | - Sue E. Hartley
- Department of BiologyUniversity of YorkWentworth WayYorkYO10 5DDUK
| | - Kelly R. Redeker
- Department of BiologyUniversity of YorkWentworth WayYorkYO10 5DDUK
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16
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Tian XL, Zhao XM, Zhao SY, Zhao JL, Mao ZC. The Biocontrol Functions of Bacillus velezensis Strain Bv-25 Against Meloidogyne incognita. Front Microbiol 2022; 13:843041. [PMID: 35464938 PMCID: PMC9022661 DOI: 10.3389/fmicb.2022.843041] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Accepted: 02/14/2022] [Indexed: 11/13/2022] Open
Abstract
Meloidogyne incognita is obligate parasitic nematode with a wide variety of hosts that causes huge economic losses every year. In an effort to identify novel bacterial biocontrols against M. incognita, the nematicidal activity of Bacillus velezensis strain Bv-25 obtained from cucumber rhizosphere soil was measured. Strain Bv-25 could inhibit the egg hatching of M. incognita and had strong nematicidal activity, with the mortality rate of second-stage M. incognita juveniles (J2s) at 100% within 12 h of exposure to Bv-25 fermentation broth. The M. incognita genes ord-1, mpk-1, and flp-18 were suppressed by Bv-25 fumigation treatment after 48 h. Strain Bv-25 could colonize cucumber roots, with 5.94 × 107 colony-forming units/g attached within 24 h, effectively reducing the infection rate with J2s by 98.6%. The bacteria up-regulated the expression levels of cucumber defense response genes pr1, pr3, and lox1 and induced resistance to M. incognita in split-root trials. Potted trials showed that Bv-25 reduced cucumber root knots by 73.8%. The field experiment demonstrated that disease index was reduced by 61.6%, cucumber height increased by 14.4%, and yield increased by 36.5% in Bv-25-treated plants compared with control. To summarize, B. velezensis strain Bv-25 strain has good potential to control root-knot nematodes both when colonizing the plant roots and through its volatile compounds.
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Affiliation(s)
- Xue-liang Tian
- Henan Engineering Research Center of Biological Pesticide & Fertilizer Development and Synergistic Application, Henan Institute of Science and Technology, Xinxiang, China
| | - Xiao-man Zhao
- Henan Engineering Research Center of Biological Pesticide & Fertilizer Development and Synergistic Application, Henan Institute of Science and Technology, Xinxiang, China
- Insititute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Song-yu Zhao
- Henan Engineering Research Center of Biological Pesticide & Fertilizer Development and Synergistic Application, Henan Institute of Science and Technology, Xinxiang, China
| | - Jian-long Zhao
- Insititute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Zhen-chuan Mao
- Insititute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
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Čepulytė R, Bu da V. Toward Chemical Ecology of Plant-Parasitic Nematodes: Kairomones, Pheromones, and Other Behaviorally Active Chemical Compounds. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:1367-1390. [PMID: 35099951 DOI: 10.1021/acs.jafc.1c04833] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
An overview of natural chemical compounds involved in plant-parasitic nematode (PPN) behavior is presented and classified following a system accepted by chemoecologists. Kairomonal and other egg-hatching stimulants, as well as attractants for juveniles, are presented. Sex, aggregation, egg-hatching, and putative diapause PPN pheromones are analyzed and grouped into clusters of primers and releasers. The role of over 500 chemical compounds, both organic and inorganic, involved in PPN behavior is reviewed, with the most widely analyzed and least studied fields of PPN chemical ecology indicated. Knowledge on PPN chemical ecology facilitates environmentally friendly integrated pest management. This could be achieved by disrupting biointeractions between nematodes and their host plants and/or between nematodes. Data on biologically active chemicals reveals targets for resistant plant selection, including through application of gene silencing techniques.
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Affiliation(s)
- Rasa Čepulytė
- Institute of Ecology, Nature Research Centre, Vilnius 08412, Lithuania
| | - Vincas Bu da
- Institute of Ecology, Nature Research Centre, Vilnius 08412, Lithuania
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18
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Pacheco PVM, Campos VP, Terra WC, Pedroso MP, de Paula LL, da Silva MSG, Monteiro TSA, de Freitas LG. Attraction and toxicity: Ways volatile organic compounds released by Pochonia chlamydosporia affect Meloidogyne incognita. Microbiol Res 2021; 255:126925. [PMID: 34823077 DOI: 10.1016/j.micres.2021.126925] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 11/18/2021] [Accepted: 11/19/2021] [Indexed: 10/19/2022]
Abstract
The production of volatile organic compounds (VOCs) acting against plant-parasitic nematodes has been characterized in different fungi; however, the role of VOCs emitted by Pochonia chlamydosporia in its trophic interaction with Meloidogyne incognita is still unknown. The aim of this study was to determine the effects of VOCs emitted by P. chlamydosporia strain Pc-10 on different stages (eggs, juveniles and female) of the M. incognita life cycle. Exposure of M. incognita eggs to VOCs released by Pc-10 resulted in a reduction up to 88 % in the nematode egg hatching, when compared to the control treatments. The VOCs emitted by Pc-10 also attracted M. incognita second-stage juveniles (J2). Through gas chromatography-mass spectrometry (GC-MS), three molecules were identified from the volatiles of the strain Pc-10, with 1,4-dimethoxybenzene being the major compound. In tests performed in vitro, 1,4-dimethoxybenzene at a concentration of 1050 μg mL-1 inhibited M. incognita egg hatching by up to 78.7 % compared to the control (0 μg mL-1) and attracted M. incognita J2 in all concentrations evaluated (1, 10, 100, 1000, and 10000 μg mL-1). The 1,4-dimethoxybenzene also showed fumigant and non-fumigant nematicidal activity against M. incognita. This compound presented lethal concentration for 50 % (LC50) of M. incognita J2 ranged from 132 to 136 μg mL-1. Fumigation with 1,4-dimethoxybenzene (100 mg) reduced egg hatching by up to 89 % and killed up to 86 % of M. incognita J2 compared to the control (0 μg mL-1). In vivo, the VOCs produced by Pc-10, 1,4-dimethoxybenzene, and the combination of both (Pc-10 + 1,4-dimethoxybenzene) attracted the M. incognita J2, compared to the respective controls. To the best of our knowledge, this is the first report on the attraction of M. incognita J2 and the toxicity to eggs and J2 by VOCs from P. chlamydosporia in which 1,4-dimethoxybenzene is the main toxin and attractant.
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Affiliation(s)
| | - Vicente Paulo Campos
- Federal University of Lavras (UFLA), Department of Plant Pathology, 37200-900, Lavras, MG, Brazil.
| | - Willian César Terra
- Federal University of Lavras (UFLA), Department of Plant Pathology, 37200-900, Lavras, MG, Brazil.
| | - Marcio Pozzobon Pedroso
- Federal University of Lavras (UFLA), Department of Chemistry, 37200-900, Lavras, MG, Brazil.
| | - Letícia Lopes de Paula
- Federal University of Lavras (UFLA), Department of Plant Pathology, 37200-900, Lavras, MG, Brazil.
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Vlaar LE, Bertran A, Rahimi M, Dong L, Kammenga JE, Helder J, Goverse A, Bouwmeester HJ. On the role of dauer in the adaptation of nematodes to a parasitic lifestyle. Parasit Vectors 2021; 14:554. [PMID: 34706780 PMCID: PMC8555053 DOI: 10.1186/s13071-021-04953-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Accepted: 08/13/2021] [Indexed: 11/25/2022] Open
Abstract
Nematodes are presumably the most abundant Metazoa on Earth, and can even be found in some of the most hostile environments of our planet. Various types of hypobiosis evolved to adapt their life cycles to such harsh environmental conditions. The five most distal major clades of the phylum Nematoda (Clades 8-12), formerly referred to as the Secernentea, contain many economically relevant parasitic nematodes. In this group, a special type of hypobiosis, dauer, has evolved. The dauer signalling pathway, which culminates in the biosynthesis of dafachronic acid (DA), is intensively studied in the free-living nematode Caenorhabditis elegans, and it has been hypothesized that the dauer stage may have been a prerequisite for the evolution of a wide range of parasitic lifestyles among other nematode species. Biosynthesis of DA is not specific for hypobiosis, but if it results in exit of the hypobiotic state, it is one of the main criteria to define certain behaviour as dauer. Within Clades 9 and 10, the involvement of DA has been validated experimentally, and dauer is therefore generally accepted to occur in those clades. However, for other clades, such as Clade 12, this has hardly been explored. In this review, we provide clarity on the nomenclature associated with hypobiosis and dauer across different nematological subfields. We discuss evidence for dauer-like stages in Clades 8 to 12 and support this with a meta-analysis of available genomic data. Furthermore, we discuss indications for a simplified dauer signalling pathway in parasitic nematodes. Finally, we zoom in on the host cues that induce exit from the hypobiotic stage and introduce two hypotheses on how these signals might feed into the dauer signalling pathway for plant-parasitic nematodes. With this work, we contribute to the deeper understanding of the molecular mechanisms underlying hypobiosis in parasitic nematodes. Based on this, novel strategies for the control of parasitic nematodes can be developed.
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Affiliation(s)
- Lieke E Vlaar
- Plant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Andre Bertran
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Mehran Rahimi
- Plant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Lemeng Dong
- Plant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands
| | - Jan E Kammenga
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Johannes Helder
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Aska Goverse
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Harro J Bouwmeester
- Plant Hormone Biology Group, Green Life Sciences Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, The Netherlands.
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20
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Oka Y. Aromatic compounds that attract Meloidogyne species second-stage juveniles in soil. PEST MANAGEMENT SCIENCE 2021; 77:4288-4297. [PMID: 34096157 DOI: 10.1002/ps.6506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2021] [Revised: 05/09/2021] [Accepted: 06/06/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Nematode attractants could serve in nematode control strategies by combining with chemical or biological nematicides or by interrupting the nematodes' host-finding process. The attractiveness of some benzenoid aromatic compounds, mainly benzoic acids, alcohols, aldehydes and phenols, to second-stage juveniles (J2) of four Meloidogyne species (M. hapla, M. incognita, M. javanica and M. marylandi) was evaluated by using trap tubes and balls filled with washed dune sand buried in nematode-inoculated sand in Petri dishes. RESULTS Two-methoxybenzaldehyde, 2-methoxycinnamaldehyde, 2-hydroxybenzoic acid (salicylic acid), 2-hydroxy-3-methoxybenzaldehyde (o-vanillin), 3-methoxybenzoic acid, 4-methoxybenzoic acid and trans-cinnamic acid effectively attracted J2 of all or most of the four Meloidogyne species to trap tubes in a one-compound assay. When nematodes were exposed to three different compounds simultaneously in the three-compound assay, J2 of all Meloidogyne species were attracted mainly to 2-methoxycinnamaldehyde, salicylic acid and 4-methoxybenzoic acid. Exceptions were M. hapla J2, which were not attracted to salicylic acid. In the soil column assay, M. javanica and M. incognita J2 were attracted upward to 4-methoxybenzoic acid in a trap ball located 4 or 8 cm above the inoculation point, whereas salicylic acid and 3-methoxybenzoic acid demonstrated slight, if any attraction. CONCLUSION Although some of the tested compounds exist in root exudates, it is not clear whether they are involved in the nematode host-searching process in nature. The attractants found in the study have potential for use in Meloidogyne species control, probably as a nematode trap constituent or as compounds that disrupt the nematodes' host-finding process. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Yuji Oka
- Nematology Unit, Gilat Research Center, Agricultural Research Organization, M. P. Negev, Israel
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21
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Tsai AYL, Iwamoto Y, Tsumuraya Y, Oota M, Konishi T, Ito S, Kotake T, Ishikawa H, Sawa S. Root-knot nematode chemotaxis is positively regulated by l-galactose sidechains of mucilage carbohydrate rhamnogalacturonan-I. SCIENCE ADVANCES 2021; 7:eabh4182. [PMID: 34215589 PMCID: PMC11060035 DOI: 10.1126/sciadv.abh4182] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Accepted: 05/18/2021] [Indexed: 06/13/2023]
Abstract
Root-knot nematodes (RKNs) are plant parasites and major agricultural pests. RKNs are thought to locate hosts through chemotaxis by sensing host-secreted chemoattractants; however, the structures and properties of these attractants are not well understood. Here, we describe a previously unknown RKN attractant from flaxseed mucilage that enhances infection of Arabidopsis and tomato, which resembles the pectic polysaccharide rhamnogalacturonan-I (RG-I). Fucose and galactose sidechains of the purified attractant were found to be required for attractant activity. Furthermore, the disaccharide α-l-galactosyl-1,3-l-rhamnose, which forms the linkage between the RG-I backbone and galactose sidechains of the purified attractant, was sufficient to attract RKN. These results show that the α-l-galactosyl-1,3-l-rhamnose linkage in the purified attractant from flaxseed mucilage is essential for RKN attraction. The present work also suggests that nematodes can detect environmental chemicals with high specificity, such as the presence of chiral centers and hydroxyl groups.
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Affiliation(s)
- Allen Yi-Lun Tsai
- Department of Biological Sciences, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
- International Research Center for Agricultural and Environmental Biology, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
| | - Yuka Iwamoto
- Department of Chemistry, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
| | - Yoichi Tsumuraya
- Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama 338-8570, Japan
| | - Morihiro Oota
- Department of Biological Sciences, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
| | - Teruko Konishi
- Department of Bioscience and Biotechnology, Faculty of Agriculture, University of the Ryukyus, Okinawa 903-0213, Japan
| | - Shinsaku Ito
- Department of Bioscience, Faculty of Life Sciences, Tokyo University of Agriculture, Tokyo 156-8502, Japan
| | - Toshihisa Kotake
- Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama 338-8570, Japan
| | - Hayato Ishikawa
- Department of Chemistry, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
| | - Shinichiro Sawa
- Department of Biological Sciences, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan.
- International Research Center for Agricultural and Environmental Biology, Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
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You J, Pan F, Wang S, Wang Y, Hu Y. FMRFamide-Like Peptide 22 Influences the Head Movement, Host Finding, and Infection of Heterodera glycines. FRONTIERS IN PLANT SCIENCE 2021; 12:673354. [PMID: 34239524 PMCID: PMC8258376 DOI: 10.3389/fpls.2021.673354] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Accepted: 05/17/2021] [Indexed: 05/13/2023]
Abstract
The FMRFamide-like peptides (FLPs) represent the largest family of nematode neuropeptides and are involved in multiple parasitic activities. The immunoreactivity to FMRFamide within the nervous system of Heterodera glycines, the most economically damaging parasite of soybean [Glycine max L. (Merr)], has been reported in previous research. However, the family of genes encoding FLPs of H. glycines were not identified and functionally characterized. In this study, an FLP encoding gene Hg-flp-22 was cloned from H. glycines, and its functional characterization was uncovered by using in vitro RNA interference and application of synthetic peptides. Bioinformatics analysis showed that flp-22 is widely expressed in multiple nematode species, where they encode the highly conserved KWMRFamide motifs. Quantitative real-time (qRT)-PCR results revealed that Hg-flp-22 was highly expressed in the infective second-stage juveniles (J2s) and adult males. Silencing of Hg-flp-22 resulted in the reduced movement of J2s to the host root and reduced penetration ability, as well as a reduction in their subsequent number of females. Behavior and infection assays demonstrated that application of synthetic peptides Hg-FLP-22b (TPQGKWMRFa) and Hg-FLP-22c (KMAIEGGKWVRFa) significantly increased the head movement frequency and host invasion abilities in H. glycines but not in Meloidogyne incognita. In addition, the number of H. glycines females on the host roots was found to be significantly higher in Hg-FLP-22b treated nematodes than the ddH2O-treated control J2s. These results presented in this study elucidated that Hg-flp-22 plays a role in regulating locomotion and infection of H. glycines. This suggests the potential of FLP signaling as putative control targets for H. glycines in soybean production.
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Affiliation(s)
- Jia You
- Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, China
- Institute of Pratacultural Science, Heilongjiang Academy of Agricultural Science, Harbin, China
| | - Fengjuan Pan
- Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, China
| | - Shuo Wang
- Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, China
| | - Yu Wang
- College of Agricultural Resource and Environment, Heilongjiang University, Harbin, China
| | - Yanfeng Hu
- Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, China
- *Correspondence: Yanfeng Hu,
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Jayaraman S, Naorem A, Lal R, Dalal RC, Sinha N, Patra A, Chaudhari S. Disease-Suppressive Soils-Beyond Food Production: a Critical Review. JOURNAL OF SOIL SCIENCE AND PLANT NUTRITION 2021; 21:1437-1465. [PMID: 33746349 PMCID: PMC7953945 DOI: 10.1007/s42729-021-00451-x] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Accepted: 02/21/2021] [Indexed: 05/09/2023]
Abstract
In the pursuit of higher food production and economic growth and increasing population, we have often jeopardized natural resources such as soil, water, vegetation, and biodiversity at an alarming rate. In this process, wider adoption of intensive farming practices, namely changes in land use, imbalanced fertilizer application, minimum addition of organic residue/manure, and non-adoption of site-specific conservation measures, has led to declining in soil health and land degradation in an irreversible manner. In addition, increasing use of pesticides, coupled with soil and water pollution, has led the researchers to search for an environmental-friendly and cost-effective alternatives to controlling soil-borne diseases that are difficult to control, and which significantly limit agricultural productivity. Since the 1960s, disease-suppressive soils (DSS) have been identified and studied around the world. Soil disease suppression is the reduction in the incidence of soil-borne diseases even in the presence of a host plant and inoculum in the soil. The disease-suppressive capacity is mainly attributed to diverse microbial communities present in the soil that could act against soil-borne pathogens in multifaceted ways. The beneficial microorganisms employ some specific functions such as antibiosis, parasitism, competition for resources, and predation. However, there has been increasing evidence on the role of soil abiotic factors that largely influence the disease suppression. The intricate interactions of the soil, plant, and environmental components in a disease triangle make this process complex yet crucial to study to reduce disease incidence. Increasing resistance of the pathogen to presently available chemicals has led to the shift from culturable microbes to unexplored and unculturable microbes. Agricultural management practices such as tillage, fertilization, manures, irrigation, and amendment applications significantly alter the soil physicochemical environment and influence the growth and behaviour of antagonistic microbes. Plant factors such as age, type of crop, and root behaviour of the plant could stimulate or limit the diversity and structure of soil microorganisms in the rhizosphere. Further, identification and in-depth of disease-suppressive soils could lead to the discovery of more beneficial microorganisms with novel anti-microbial and plant promoting traits. To date, several microbial species have been isolated and proposed as key contributors in disease suppression, but the complexities as well as the mechanisms of the microbial and abiotic interactions remain elusive for most of the disease-suppressive soils. Thus, this review critically explores disease-suppressive attributes in soils, mechanisms involved, and biotic and abiotic factors affecting DSS and also briefly reviewing soil microbiome for anti-microbial drugs, in fact, a consequence of DSS phenomenon.
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Affiliation(s)
- Somasundaram Jayaraman
- ICAR–Indian Institute of Soil Science, Nabibagh, Berasia Road, Bhopal, Madhya Pradesh 462038 India
| | - A.K. Naorem
- ICAR– Central Arid Zone Research Institute, Regional Research Station-Kukma, Bhuj, Gujarat 370105 India
| | - Rattan Lal
- Carbon Management Sequestration Center, The Ohio State University, 2021 Coffey Rd, Columbus, OH USA
| | - Ram C. Dalal
- School of Agriculture and Food Sciences, The University of Queensland, St Lucia, QLD 4072 Australia
| | - N.K. Sinha
- ICAR–Indian Institute of Soil Science, Nabibagh, Berasia Road, Bhopal, Madhya Pradesh 462038 India
| | - A.K. Patra
- ICAR–Indian Institute of Soil Science, Nabibagh, Berasia Road, Bhopal, Madhya Pradesh 462038 India
| | - S.K. Chaudhari
- Indian Council of Agricultural Research, KAB-II, New Delhi, India
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Banakar P, Hada A, Papolu PK, Rao U. Simultaneous RNAi Knockdown of Three FMRFamide-Like Peptide Genes, Mi-flp1, Mi-flp12, and Mi-flp18 Provides Resistance to Root-Knot Nematode, Meloidogyne incognita. Front Microbiol 2020; 11:573916. [PMID: 33193182 PMCID: PMC7644837 DOI: 10.3389/fmicb.2020.573916] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Accepted: 10/06/2020] [Indexed: 12/03/2022] Open
Abstract
Root-knot nematode, Meloidogyne incognita, is a devastating sedentary endoparasite that causes considerable damage to agricultural crops worldwide. Modern approaches targeting the physiological processes have confirmed the potential of FMRFamide like peptide (FLPs) family of neuromotor genes for nematode management. Here, we assessed the knock down effect of Mi-flp1, Mi-flp12, and Mi-flp18 of M. incognita and their combinatorial fusion cassette on infection and reproduction. Comparative developmental profiling revealed higher expression of all three FLPs in the infective 2nd stage juveniles (J2s). Further, Mi-flp1 expression in J2s could be localized in the ventral pharyngeal nerves near to metacarpal bulb of the central nervous system. In vitro RNAi silencing of three FLPs and their fusion cassette in M. incognita J2s showed that combinatorial silencing is the most effective and affected nematode host recognition followed by reduced penetration ability and subsequent infection into tomato and adzuki bean roots. Northern blot analysis of J2s soaked in fusion dsRNA revealed the presence of siRNA of all three target FLPs establishing successful processing of fusion gene dsRNA in the J2s. Further, evaluation of the fusion gene cassette is done through host-delivered RNAi in tobacco. Transgenic plants with fusion gene RNA-expressing vector were generated in which transgene integration was confirmed by PCR, qRT-PCR, and Southern blot analysis. Transcript accumulation of three FLPs constituting the fusion gene was reduced in the M. incognita females collected from the transgenic plants that provided additional evidence for successful gene silencing. Evaluation of positive T1 transgenic lines against M. incognita brought down the disease burden as indicated by various disease parameters that ultimately reduced the nematode multiplication factor (MF) by 85% compared to the wild-type plants. The study establishes the possibility of simultaneous silencing of more than one FLPs gene for effective management of M. incognita.
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Affiliation(s)
- Prakash Banakar
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India.,Department of Nematology and Centre for Bio-Nanotechnology, Chaudhary Charan Singh Haryana Agricultural University, Hisar, India
| | - Alkesh Hada
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Pradeep K Papolu
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Uma Rao
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
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25
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Adedeji AA, Babalola OO. Secondary metabolites as plant defensive strategy: a large role for small molecules in the near root region. PLANTA 2020; 252:61. [PMID: 32965531 DOI: 10.1007/s00425-020-03468-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 09/12/2020] [Indexed: 05/20/2023]
Abstract
The roles of plant roots are not merely limited to the provision of mechanical support, nutrients and water, but also include more specific roles, such as the capacity to secrete diverse chemical substances. These metabolites are actively secreted in the near root and play specific and significant functions in plant defense and communication. In this review, we detail the various preventive roles of these powerful substances in the rhizosphere with a perspective as to how plants recruit microbes as a preventive measure against other pathogenic microbes, also, briefly about how the rhizosphere can repel insect pests, and how these chemical substances alter microbial dynamics and enhance symbiotic relationships. We also highlight the need for more research in this area to detail the mode of action and quantification of these compounds in the environment and their roles in some important biological processes in microorganisms and plants.
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Affiliation(s)
- Atilade Adedayo Adedeji
- Food Security and Safety Niche Area, Faculty of Natural and Agricultural Sciences, North-West University, Private Bag X2046, Mmabatho, 2735, South Africa
- Department of Biochemistry and Microbiology, School of Environmental and Biological Sciences, Rutgers University, New Brunswick, NJ, USA
| | - Olubukola Oluranti Babalola
- Food Security and Safety Niche Area, Faculty of Natural and Agricultural Sciences, North-West University, Private Bag X2046, Mmabatho, 2735, South Africa.
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26
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Kuang MS, Liu TT, Wu HB, Lan HP, Wen YX, Wu HB, Li XM. Constituents Leached by Tomato Seeds Regulate the Behavior of Root-Knot Nematodes and Their Antifungal Effects against Seed-Borne Fungi. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:9061-9069. [PMID: 32786848 DOI: 10.1021/acs.jafc.0c01797] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Germinating seeds can release diverse phytochemicals that repel, inhibit, or kill pathogens such as root-knot nematodes and seed-borne fungi. However, little is known about the composition of these phytochemicals and their effects on pathogens. In this study, we demonstrated that tomato seed exudates can attract the nematode Meloidogyne incognita using a dual-choice assay. Eighteen compounds were then isolated and identified from the exudates. Of these, esters (1-3), fatty acids (4-6), and phenolic acids (10-12) were proven to be the signaling molecules that facilitated the host-seeking process of second-stage juveniles (J2s) of nematodes, while alkaloids (17 and 18) disrupted J2s in locating their host. Furthermore, some phenolic acids and alkaloids showed antifungal effects against seed-borne fungi. In particular, ferulic acid (12) showed obvious activity against Aspergillus flavus (minimum inhibitory concentration (MIC), 32 μg/mL), while dihydrocapsaicin (17) showed noticeable activity against Fusarium oxysporum (MIC, 16 μg/mL). Overall, this study presents the first evidence that M. incognita can be attracted to or deterred by various compounds in seed exudates through identification of the structures of the compounds in the exudates and analysis of their effects on nematodes. Furthermore, some antifungal compounds were also found. The findings of this work suggest that seed exudates are new source for finding insights into the development of plant protective substances with nematocidal and antifungal effects.
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Affiliation(s)
- Ming-Shan Kuang
- College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, People's Republic of China
| | - Ting-Ting Liu
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing 100081, People's Republic of China
| | - Hai-Bin Wu
- Shandong Institute of Pomology, Tai'an 271000, People's Republic of China
| | - Hui-Peng Lan
- College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, People's Republic of China
| | - Yu-Xin Wen
- College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, People's Republic of China
| | - Hai-Bo Wu
- College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, People's Republic of China
| | - Xi-Meng Li
- Hawkesbury Institute for the Environment, Western Sydney University, Locked Bag 1797, Penrith, NSW 2751, Australia
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Tsai AYL, Oota M, Sawa S. Chemotactic Host-Finding Strategies of Plant Endoparasites and Endophytes. FRONTIERS IN PLANT SCIENCE 2020; 11:1167. [PMID: 32849722 PMCID: PMC7411241 DOI: 10.3389/fpls.2020.01167] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Accepted: 07/20/2020] [Indexed: 05/04/2023]
Abstract
Plants interact with microorganisms in the environment during all stages of their development and in most of their organs. These interactions can be either beneficial or detrimental for the plant and may be transient or long-term. In extreme cases, microorganisms become endoparastic or endophytic and permanently reside within a plant, while the host plant undergoes developmental reprogramming and produces new tissues or organs as a response to the invasion. Events at the cellular and molecular level following infection have been extensively described, however the mechanisms of how these microorganisms locate their plant hosts via chemotaxis remain largely unknown. In this review, we summarize recent findings concerning the signalling molecules that regulate chemotaxis of endoparasitic/endophytic bacteria, fungi, and nematodes. In particular, we will focus on the molecules secreted by plants that are most likely to act as guidance cues for microorganisms. These compounds are found in a wide range of plant species and show a variety of secondary effects. Interestingly, these compounds show different attraction potencies depending on the species of the invading organism, suggesting that cues perceived in the soil may be more complex than anticipated. However, what the cognate receptors are for these attractants, as well as the mechanism of how these attractants influence these organisms, remain important outstanding questions. Host-targeting marks the first step of plant-microorganism interactions, therefore understanding the signalling molecules involved in this step plays a key role in understanding these interactions as a whole.
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28
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Hada A, Kumari C, Phani V, Singh D, Chinnusamy V, Rao U. Host-Induced Silencing of FMRFamide-Like Peptide Genes, flp-1 and flp-12, in Rice Impairs Reproductive Fitness of the Root-Knot Nematode Meloidogyne graminicola. FRONTIERS IN PLANT SCIENCE 2020; 11:894. [PMID: 32765539 PMCID: PMC7379849 DOI: 10.3389/fpls.2020.00894] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Accepted: 06/02/2020] [Indexed: 05/26/2023]
Abstract
Rice (Oryza sativa L.) is one of the major staple food crops of the world. The productivity of rice is considerably affected by the root-knot nematode, Meloidogyne graminicola. Modern nematode management strategies targeting the physiological processes have established the potency of use of neuromotor genes for their management. Here, we explored the utility of two FMRFamide like peptide coding genes, Mg-flp-1 and Mg-flp-12 of M. graminicola for its management through host-induced gene silencing (HIGS) using Agrobacterium-mediated transformation of rice. The presence and integration of hairpin RNA (hpRNA) constructs in transgenic lines were confirmed by PCR, qRT-PCR, and Southern and Northern hybridization. Transgenic plants were evaluated against M. graminicola, where phenotypic effect of HIGS was pronounced with reduction in galling by 20-48% in the transgenic plants. This also led to significant decrease in total number of endoparasites by 31-50% for Mg-flp-1 and 34-51% for Mg-flp-12 transgenics. Likewise, number of egg masses per plant and eggs per egg mass also declined significantly in the transgenics, ultimately affecting the multiplication factor, when compared to the wild type plants. This study establishes the effectiveness of the two M. graminicola flp genes for its management and also for gene pyramiding.
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Affiliation(s)
- Alkesh Hada
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Chanchal Kumari
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Victor Phani
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
- Department of Agricultural Entomology, College of Agriculture, Uttar Banga Krishi Viswavidyalaya, Dakshin Dinajpur, India
| | - Divya Singh
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Viswanathan Chinnusamy
- Division of Plant Physiology, ICAR—Indian Agricultural Research Institute, New Delhi, India
| | - Uma Rao
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, India
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Wang P, Sun Y, Yang L, Hu Y, Li J, Wang J, Zhang F, Liu Y. Chemotactic responses of the root-knot nematode Meloidogyne incognita to Streptomyces plicatus. FEMS Microbiol Lett 2020; 366:5670793. [PMID: 31816058 DOI: 10.1093/femsle/fnz234] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2019] [Accepted: 11/19/2019] [Indexed: 12/16/2022] Open
Abstract
Rhizosphere microorganisms play an important role in the interactions of many species in the rhizosphere, including soil nematodes. One hundred strains of rhizosphere actinomycetes were screened in vitro for their effects on the chemotactic behavior of the root-knot nematode, Meloidogyne incognita. Volatile compounds produced by the strain Streptomyces plicatus G demonstrated both strong attractant and repellent activities towards M. incognita. The compound dibenzofuran attracted M. incognita nematodes strongly, while compound benzothiazole repelled them. The chemotaxis of M. incognita was also tested under controlled conditions in pot experiments. Cultures of S. plicatus G and volatile dibenzofuran attracted M. incognita while volatile benzothiazole repelled them. The results showed that volatile compounds produced by rhizosphere actinomycetes could influence the chemotaxis of nematodes to a host. This study provides new information about the interrelationship between rhizosphere actinomycetes and nematodes that may be useful in preventing nematode parasitism of agricultural crops.
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Affiliation(s)
- Pinyi Wang
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Yan Sun
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Liangliang Yang
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Yan Hu
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Jiefang Li
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Jinxing Wang
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Fei Zhang
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
| | - Yajun Liu
- State Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming 650091, China
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30
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Lu Q, Liu T, Wang N, Dou Z, Wang K, Zuo Y. Nematicidal Effect of Methyl Palmitate and Methyl Stearate against Meloidogyne incognita in Bananas. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:6502-6510. [PMID: 32463695 DOI: 10.1021/acs.jafc.0c00218] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Banana plants (Musa spp.) are susceptible to infection by many plant-parasitic nematodes, including Meloidogyne incognita. In this study, a mixed fermentation broth of chicken manure (CM) and cassava ethanol wastewater (CEW) was used to inhibit M. incognita by reducing egg hatching and by having a lethal effect on second-stage juvenile nematodes (J2s). It also alleviated nematode damage and promoted banana plant growth. Using gas chromatography-mass spectrometry (GC-MS), we identified methyl palmitate and methyl stearate as bioactive compounds. These bioactive compounds repelled J2s and inhibited egg hatching; reduced root galls, egg masses, and nematodes in soil; and downregulated the essential parasitic nematode genes Mi-flp-18 and 16D10. A Caenorhabditis elegans offspring assay showed that low concentrations of the fermentation broth, methyl palmitate, and methyl stearate were safe for its life cycle. This study explored the effective and environmentally safe strategies for controlling root-knot nematodes.
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Affiliation(s)
- Qiaofang Lu
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, Ministry of Education, China Agricultural University, 100193 Beijing, China
| | - Tongtong Liu
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, Ministry of Education, China Agricultural University, 100193 Beijing, China
| | - Nanqi Wang
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, Ministry of Education, China Agricultural University, 100193 Beijing, China
| | - Zhechao Dou
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, Ministry of Education, China Agricultural University, 100193 Beijing, China
| | - Kunguang Wang
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, Ministry of Education, China Agricultural University, 100193 Beijing, China
| | - Yuanmei Zuo
- College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Key Laboratory of Plant-Soil Interactions, Ministry of Education, China Agricultural University, 100193 Beijing, China
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Activity and reproductive capability of Meloidogyne incognita and sunflower growth response as influenced by root exudates of some medicinal plants. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2019. [DOI: 10.1016/j.bcab.2019.101418] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Liu W, Jones AL, Gosse HN, Lawrence KS, Park SW. Validation of the Chemotaxis of Plant Parasitic Nematodes Toward Host Root Exudates. J Nematol 2019; 51:e2019-63. [PMID: 34179810 PMCID: PMC6909389 DOI: 10.21307/jofnem-2019-063] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Indexed: 01/01/2023] Open
Abstract
Plant parasitic nematodes (PPN) are microscopic soil herbivores that cause damage to many economic crops. For the last century, it has been proposed that chemotaxis is the primary means by which PPN locate host plant roots. The identities and modes of action of chemoattractants that deliver host-specific messages to PPN, however, are still elusive. In this study, a unique multidimensional agar-based motility assay was developed to assess the impacts of root exudates on the short-range motility and orientation of PPN. Three PPN (Rotylenchulus reniformis, Meloidogyne incognita and Heterodera glycines) and root exudates from their respective host and non-host plants (cotton, soybean, and peanut) were used to validate the assay. As predicted, R. reniformis and M. incognita were attracted to root exudates of cotton and soybean (hosts), but not to the exudates of peanut (non-host). Likewise, H. glycines was attracted to soybean (host) root exudates. These results underpinned the intrinsic roles of root exudates in conveying the host specificity of PPN. In particular, PPN selectively identified and targeted to hydrophilic, but not hydrophobic, fractions of root exudates, indicating that groundwater should be an effective matrix for chemotaxis associated with PPN and their host plant interactions.
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Affiliation(s)
- Wenshan Liu
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849
| | - Alexis L Jones
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849
| | - Heather N Gosse
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849
| | - Kathy S Lawrence
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849
| | - Sang-Wook Park
- Department of Entomology and Plant Pathology, Auburn University, Auburn, AL 36849
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Cruz-Estrada A, Ruiz-Sánchez E, Cristóbal-Alejo J, González-Coloma A, Andrés MF, Gamboa-Angulo M. Medium-Chain Fatty Acids from Eugenia winzerlingii Leaves Causing Insect Settling Deterrent, Nematicidal, and Phytotoxic Effects. Molecules 2019; 24:molecules24091724. [PMID: 31058826 PMCID: PMC6540168 DOI: 10.3390/molecules24091724] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2019] [Revised: 04/20/2019] [Accepted: 04/20/2019] [Indexed: 12/11/2022] Open
Abstract
Eugenia winzerlingii (Myrtaceae) is an endemic plant from the Yucatan peninsula. Its organic extracts and fractions from leaves have been tested on two phloem-feeding insects, Bemisia tabaci and Myzus persicae, on two plant parasitic nematodes, Meloidogyne incognita and Meloidogyne javanica, and phytotoxicity on Lolium perenne and Solanum lycopersicum. Results showed that both the hexane extract and the ethyl acetate extract, as well as the fractions, have strong antifeedant and nematicidal effects. Gas chromatography-mass spectrometry analyses of methylated active fractions revealed the presence of a mixture of fatty acids. Authentic standards of detected fatty acids and methyl and ethyl derivatives were tested on target organisms. The most active compounds were decanoic, undecanoic, and dodecanoic acids. Methyl and ethyl ester derivatives had lower effects in comparison with free fatty acids. Dose-response experiments showed that undecanoic acid was the most potent compound with EC50 values of 21 and 6 nmol/cm2 for M. persicae and B. tabaci, respectively, and 192 and 64 nmol for M. incognita and M. javanica, respectively. In a phytotoxicity assay, medium-chain fatty acids caused a decrease of 38-52% in root length and 50-60% in leaf length of L. perenne, but no effects were observed on S. lycopersicum. This study highlights the importance of the genus Eugenia as a source of bioactive metabolites for plant pest management.
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Affiliation(s)
- Angel Cruz-Estrada
- Unidad de Biotecnología, Centro de Investigación Científica de Yucatán, Colonia Chuburná de Hidalgo, Mérida C.P. 97200, Yucatán, Mexico.
- Tecnológico Nacional de México, Instituto Tecnológico de Conkal, Conkal C.P. 97345, Yucatán, Mexico.
| | - Esaú Ruiz-Sánchez
- Tecnológico Nacional de México, Instituto Tecnológico de Conkal, Conkal C.P. 97345, Yucatán, Mexico.
| | - Jairo Cristóbal-Alejo
- Tecnológico Nacional de México, Instituto Tecnológico de Conkal, Conkal C.P. 97345, Yucatán, Mexico.
| | | | - María Fe Andrés
- Instituto de Ciencias Agrarias-CSIC, 115 Dpdo-28006 Madrid, Spain.
| | - Marcela Gamboa-Angulo
- Unidad de Biotecnología, Centro de Investigación Científica de Yucatán, Colonia Chuburná de Hidalgo, Mérida C.P. 97200, Yucatán, Mexico.
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Thapa S, Gates MK, Reuter-Carlson U, Androwski RJ, Schroeder NE. Convergent evolution of saccate body shapes in nematodes through distinct developmental mechanisms. EvoDevo 2019; 10:5. [PMID: 30911368 PMCID: PMC6416850 DOI: 10.1186/s13227-019-0118-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2018] [Accepted: 03/01/2019] [Indexed: 12/02/2022] Open
Abstract
Background The vast majority of nematode species have vermiform (worm-shaped) body plans throughout post-embryonic development. However, atypical body shapes have evolved multiple times. The plant-parasitic Tylenchomorpha nematode Heterodera glycines hatches as a vermiform infective juvenile. Following infection and the establishment of a feeding site, H. glycines grows disproportionately greater in width than length, developing into a saccate adult. Body size in Caenorhabditis elegans was previously shown to correlate with post-embryonic divisions of laterally positioned stem cell-like ‘seam’ cells and endoreduplication of seam cell epidermal daughters. To test if a similar mechanism produces the unusual body shape of saccate parasitic nematodes, we compared seam cell development and epidermal ploidy levels of H. glycines to C. elegans. To study the evolution of body shape development, we examined seam cell development of four additional Tylenchomorpha species with vermiform or saccate body shapes. Results We confirmed the presence of seam cell homologs and their proliferation in H. glycines. This results in the adult female epidermis having approximately 1800 nuclei compared with the 139 nuclei in the primary epidermal syncytium of C. elegans. Similar to C. elegans, we found a significant correlation between H. glycines body volume and the number and ploidy level of epidermal nuclei. While we found that the seam cells also proliferate in the independently evolved saccate nematode Meloidogyne incognita following infection, the division pattern differed substantially from that seen in H. glycines. Interestingly, the close relative of H. glycines, Rotylenchulus reniformis does not undergo extensive seam cell proliferation during its development into a saccate form. Conclusions Our data reveal that seam cell proliferation and epidermal nuclear ploidy correlate with growth in H. glycines. Our finding of distinct seam cell division patterns in the independently evolved saccate species M. incognita and H. glycines is suggestive of parallel evolution of saccate forms. The lack of seam cell proliferation in R. reniformis demonstrates that seam cell proliferation and endoreduplication are not strictly required for increased body volume and atypical body shape. We speculate that R. reniformis may serve as an extant transitional model for the evolution of saccate body shape.
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Affiliation(s)
- Sita Thapa
- 1Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL USA
| | - Michael K Gates
- 1Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL USA
| | - Ursula Reuter-Carlson
- 1Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL USA
| | - Rebecca J Androwski
- 2Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL USA
| | - Nathan E Schroeder
- 1Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL USA.,2Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL USA
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Liang LM, Zou CG, Xu J, Zhang KQ. Signal pathways involved in microbe-nematode interactions provide new insights into the biocontrol of plant-parasitic nematodes. Philos Trans R Soc Lond B Biol Sci 2019; 374:20180317. [PMID: 30967028 PMCID: PMC6367146 DOI: 10.1098/rstb.2018.0317] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/25/2018] [Indexed: 11/12/2022] Open
Abstract
Plant-parasitic nematodes (PPNs) cause severe damage to agricultural crops worldwide. As most chemical nematicides have negative environmental side effects, there is a pressing need for developing efficient biocontrol methods. Nematophagous microbes, the natural enemies of nematodes, are potential biocontrol agents against PPNs. These natural enemies include both bacteria and fungi and they use diverse methods to infect and kill nematodes. For instance, nematode-trapping fungi can sense host signals and produce special trapping devices to capture nematodes, whereas endo-parasitic fungi can kill nematodes by spore adhesion and invasive growth to break the nematode cuticle. By contrast, nematophagous bacteria can secrete virulence factors to kill nematodes. In addition, some bacteria can mobilize nematode-trapping fungi to kill nematodes. In response, nematodes can also sense and defend against the microbial pathogens using strategies such as producing anti-microbial peptides regulated by the innate immunity system. Recent progresses in our understanding of the signal pathways involved in microbe-nematode interactions are providing new insights in developing efficient biological control strategies against PPNs. This article is part of the theme issue 'Biotic signalling sheds light on smart pest management'.
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Affiliation(s)
- Lian-Ming Liang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan and The Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650091, People's Republic of China
- School of Life Science, Yunnan University, Kunming 650091, People's Republic of China
| | - Cheng-Gang Zou
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan and The Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650091, People's Republic of China
- School of Life Science, Yunnan University, Kunming 650091, People's Republic of China
| | - Jianping Xu
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan and The Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650091, People's Republic of China
- Department of Biology, McMaster University, Hamilton, Ontario, CanadaL8S 4K1
| | - Ke-Qin Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan and The Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650091, People's Republic of China
- School of Life Science, Yunnan University, Kunming 650091, People's Republic of China
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Tsai AYL, Higaki T, Nguyen CN, Perfus-Barbeoch L, Favery B, Sawa S. Regulation of Root-Knot Nematode Behavior by Seed-Coat Mucilage-Derived Attractants. MOLECULAR PLANT 2019; 12:99-112. [PMID: 30503864 DOI: 10.1016/j.molp.2018.11.008] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2018] [Revised: 10/21/2018] [Accepted: 11/10/2018] [Indexed: 05/08/2023]
Abstract
Seed exudates influence the behavior of soil organisms, but how this occurs remains unclear, particularly for multicellular animals. Here we show that compounds associated with Arabidopsis seed-coat mucilage regulate the behavior of soil-borne animals, specifically root-knot nematodes (RKNs). Infective RKN J2 larvae actively travel toward Arabidopsis seeds through chemotaxis. Analysis of Arabidopsis mucilage mutants demonstrated that the attraction of RKNs to Arabidopsis seeds requires the synthesis and extrusion of seed-coat mucilage. Extracted mucilage alone is not sufficient to attract RKNs, but seed-surface carbohydrates and proteins are required for this process. These findings suggest that the RKN chemoattractant is synthesized de novo upon mucilage extrusion but may be highly unstable. RKNs attracted by this mucilage-dependent mechanism can infect the emerging seedling. However, the attraction signal from seedling roots likely acts independently of the seed-coat signal and may mask the attraction to seed-coat mucilage after germination. Multiple RKN species are attracted by Arabidopsis seeds, suggesting that this mechanism is conserved in RKNs. These findings indicate that seed exudate can regulate the behavior of multicellular animals and highlight the potential roles of seed-coat mucilage in biotic interactions with soil microorganisms.
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Affiliation(s)
- Allen Yi-Lun Tsai
- Graduate School of Science & Technology, Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto 860-8555, Japan
| | - Takumi Higaki
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa-shi, Chiba 277-8562, Japan
| | - Chinh-Nghia Nguyen
- INRA, Université Côte d'Azur, CNRS, UMR 1355-7254 Institut Sophia Agrobiotech, 06900 Sophia Antipolis, France
| | - Laetitia Perfus-Barbeoch
- INRA, Université Côte d'Azur, CNRS, UMR 1355-7254 Institut Sophia Agrobiotech, 06900 Sophia Antipolis, France
| | - Bruno Favery
- INRA, Université Côte d'Azur, CNRS, UMR 1355-7254 Institut Sophia Agrobiotech, 06900 Sophia Antipolis, France
| | - Shinichiro Sawa
- Graduate School of Science & Technology, Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto 860-8555, Japan.
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Sikder MM, Vestergård M. Impacts of Root Metabolites on Soil Nematodes. FRONTIERS IN PLANT SCIENCE 2019; 10:1792. [PMID: 32082349 PMCID: PMC7005220 DOI: 10.3389/fpls.2019.01792] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Accepted: 12/23/2019] [Indexed: 05/20/2023]
Abstract
Plant parasitic nematodes cause significant crop damage globally. Currently, many nematicides have been banned or are being phased out in Europe and other parts of the world because of environmental and human health concerns. Therefore, we need to focus on sustainable and alternative methods of nematode control to protect crops. Plant roots contain and release a wide range of bioactive secondary metabolites, many of which are known defense compounds. Hence, profound understanding of the root mediated interactions between plants and plant parasitic nematodes may contribute to efficient control and management of pest nematodes. In this review, we have compiled literature that documents effects of root metabolites on plant parasitic nematodes. These chemical compounds act as either nematode attractants, repellents, hatching stimulants or inhibitors. We have summarized the few studies that describe how root metabolites regulate the expression of nematode genes. As non-herbivorous nematodes contribute to decomposition, nutrient mineralization, microbial community structuring and control of herbivorous insect larvae, we also review the impact of plant metabolites on these non-target organisms.
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Affiliation(s)
- Md Maniruzzaman Sikder
- Department of Agroecology, AU-Flakkebjerg, Aarhus University, Slagelse, Denmark
- Mycology and Plant Pathology, Department of Botany, Jahangirnagar University, Dhaka, Bangladesh
| | - Mette Vestergård
- Department of Agroecology, AU-Flakkebjerg, Aarhus University, Slagelse, Denmark
- *Correspondence: Mette Vestergård,
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Zhu S, Morel JB. Molecular Mechanisms Underlying Microbial Disease Control in Intercropping. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2019; 32:20-24. [PMID: 29996677 DOI: 10.1094/mpmi-03-18-0058-cr] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Many reports indicate that intercropping, which usually consists of growing two species next to each other, reduces the incidence of microbial diseases. Besides mechanisms operating at the field level, like inoculum dilution, there is recent evidence that plant-centered mechanisms with identified plant molecules and pathways are also involved. First, plants may trigger the induction of resistance in neighboring plants by the well-known mechanism of induced resistance. Second, molecules produced by one plant, either above- or belowground, can directly inhibit pathogens or indirectly trigger resistance through the induction of the plant immune system in neighboring plants. Third, competition for resources such as light or nutrients may indirectly modify the expression of the plant immune system. The conceptual frameworks of nonkin/stranger recognition and competition may be useful to further investigate the molecular mechanisms underlying crop protection in interspecific plant mixtures.
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Affiliation(s)
- Shusheng Zhu
- 1 State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, Yunnan, China
- 2 Key Laboratory of Agro-Biodiversity and Pest Management of Education Ministry of China, Yunnan Agricultural University; and
| | - Jean-Benoît Morel
- 3 BGPI, INRA, CIRAD, SupAgro, Univ. Montpellier, Montpellier, France
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Saito YF, Miyazaki SH, Bartlem DG, Nagamatsu Y, Saito T. Chemical compounds from Dictyostelium discoideum repel a plant-parasitic nematode and can protect roots. PLoS One 2018; 13:e0204671. [PMID: 30261017 PMCID: PMC6160129 DOI: 10.1371/journal.pone.0204671] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2018] [Accepted: 09/12/2018] [Indexed: 11/18/2022] Open
Abstract
Slime mold species in the genus Dictyostelium are considered to have a close relationship with non-parasitic nematodes; they are sympatric in soils and can exhibit interspecific competition for food. We investigated whether this relationship extends to a plant-parasitic nematode that is active in the rhizosphere and has broad host specificity, damaging crops worldwide. Using a novel assay to examine the interaction between the cellular slime mold, Dictyostelium discoideum, and the plant-parasitic nematodes, Meloidogyne spp., we found that cellular slime molds can repel plant parasitic nematodes. Specifically, the repulsion activity was in response to chemical compounds released by cellular slime mold fruiting bodies. Under laboratory conditions, these soluble chemical extracts from fruiting bodies of D. discoideum showed repulsion activity strong enough to protect plant roots. The fruiting body cell extracts repelled but were not toxic to the plant-parasitic nematodes.
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Affiliation(s)
- Yumiko F. Saito
- Graduate School of Science and Technology, Sophia University, Tokyo, Japan
| | - Saki H. Miyazaki
- Graduate School of Science and Technology, Sophia University, Tokyo, Japan
| | - Derek G. Bartlem
- Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan
| | - Yukiko Nagamatsu
- Institute of Environmental Science, Panefri Industrial Company, Okinawa, Japan
| | - Tamao Saito
- Faculty of Science and Technology, Sophia University, Tokyo, Japan
- * E-mail:
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Borges RM. The Galling Truth: Limited Knowledge of Gall-Associated Volatiles in Multitrophic Interactions. FRONTIERS IN PLANT SCIENCE 2018; 9:1139. [PMID: 30140272 PMCID: PMC6094090 DOI: 10.3389/fpls.2018.01139] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Accepted: 07/13/2018] [Indexed: 05/18/2023]
Abstract
Galls are the product of enclosed internal herbivory where the gall maker induces a plant structure within which the herbivores complete their development. For successful sustained herbivory, gall makers must (1) suppress the induction of plant defenses in response to herbivory that is usually mediated through the jasmonic acid pathway and involves volatile organic compound (VOC) production, or (2) have mechanisms to cope with herbivory-induced VOCs, or (3) manipulate production of VOCs to their own advantage. Similarly, plants may have mechanisms (1) to avoid VOC suppression or (2) to attract galler enemies such as parasitoids. While research on VOCs involved in plant-herbivore-parasitoid/predator interactions is extensive, this has largely focussed on the impact of piercing, sucking, and chewing external herbivores or their eggs on VOC emissions. Despite the importance of gallers, owing to their damage to many economically valuable plants, the role of volatiles in gall-associated herbivory has been neglected; exceptions include studies on beneficial gallers and their enemies such as those that occur in brood-site pollination mutualisms. This is possibly the consequence of the difficulties inherent with studying internally occurring herbivory. This review examines the evidence for VOCs in galler attraction to host plants, potential VOC suppression by gallers, increased emission from galls and neighboring tissues, attraction of galler enemies, and the role of galler symbionts in VOC production. It suggests a research focus and ways in which studies on galler-associated VOCs can progress from a philatelic approach involving VOC listing toward a more predictive and evolutionary perspective.
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Affiliation(s)
- Renee M. Borges
- Centre for Ecological Sciences, Indian Institute of Science, Bengaluru, India
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Han Z, Thapa S, Reuter-Carlson U, Reed H, Gates M, Lambert KN, Schroeder NE. Immobility in the sedentary plant-parasitic nematode H. glycines is associated with remodeling of neuromuscular tissue. PLoS Pathog 2018; 14:e1007198. [PMID: 30114260 PMCID: PMC6095618 DOI: 10.1371/journal.ppat.1007198] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Accepted: 07/05/2018] [Indexed: 12/22/2022] Open
Abstract
The sedentary plant-parasitic nematodes are considered among the most economically damaging pathogens of plants. Following infection and the establishment of a feeding site, sedentary nematodes become immobile. Loss of mobility is reversed in adult males while females never regain mobility. The structural basis for this change in mobility is unknown. We used a combination of light and transmission electron microscopy to demonstrate cell-specific muscle atrophy and sex-specific renewal of neuromuscular tissue in the sedentary nematode Heterodera glycines. We found that both females and males undergo body wall muscle atrophy and loss of attachment to the underlying cuticle during immobile developmental stages. Male H. glycines undergo somatic muscle renewal prior to molting into a mobile adult. In addition, we found developmental changes to the organization and number of motor neurons in the ventral nerve cord correlated with changes in mobility. To further examine neuronal changes associated with immobility, we used a combination of immunohistochemistry and molecular biology to characterize the GABAergic nervous system of H. glycines during mobile and immobile stages. We cloned and confirmed the function of the putative H. glycines GABA synthesis-encoding gene hg-unc-25 using heterologous rescue in C. elegans. We found a reduction in gene expression of hg-unc-25 as well as a reduction in the number of GABA-immunoreactive neurons during immobile developmental stages. Finally, we found evidence of similar muscle atrophy in the phylogenetically diverged plant-parasitic nematode Meloidogyne incognita. Together, our data demonstrate remodeling of neuromuscular structure and function during sedentary plant-parasitic nematode development.
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Affiliation(s)
- Ziduan Han
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
| | - Sita Thapa
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
| | - Ursula Reuter-Carlson
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
| | - Hannah Reed
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
| | - Michael Gates
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
| | - Kris N. Lambert
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
| | - Nathan E. Schroeder
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
- Neuroscience Program, University of Illinois at Urbana-Champaign, Urbana, IL, United States of America
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Cheng C, Qin J, Wu C, Lei M, Wang Y, Zhang L. Suppressing a plant-parasitic nematode with fungivorous behavior by fungal transformation of a Bt cry gene. Microb Cell Fact 2018; 17:116. [PMID: 30037328 PMCID: PMC6055344 DOI: 10.1186/s12934-018-0960-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2018] [Accepted: 07/09/2018] [Indexed: 12/19/2022] Open
Abstract
BACKGROUND Pine wilt disease, caused by the pinewood nematode Bursaphelenchus xylophilus (PWN), is an important destructive disease of pine forests worldwide. In addition to behaving as a plant-parasitic nematode that feeds on epithelial cells of pines, this pest relies on fungal associates for completing its life cycle inside pine trees. Manipulating microbial symbionts to block pest transmission has exhibited an exciting prospect in recent years; however, transforming the fungal mutualists to toxin delivery agents for suppressing PWN growth has received little attention. RESULTS In the present study, a nematicidal gene cry5Ba3, originally from a soil Bacillus thuringiensis (Bt) strain, was codon-preferred as cry5Ba3Φ and integrated into the genome of a fungus eaten by PWN, Botrytis cinerea, using Agrobacterium tumefaciens-mediated transformation. Supplementing wild-type B. cinerea extract with that from the cry5Ba3Φ transformant significantly suppressed PWN growth; moreover, the nematodes lost fitness significantly when feeding on the mycelia of the cry5Ba3Φ transformant. N-terminal deletion of Cry5Ba3Φ protein weakened the nematicidal activity more dramatically than did the C-terminal deletion, indicating that domain I (endotoxin-N) plays a more important role in its nematicidal function than domain III (endotoxin-C), which is similar to certain insecticidal Cry proteins. CONCLUSIONS Transformation of Bt nematicidal cry genes in fungi can alter the fungivorous performance of B. xylophilus and reduce nematode fitness. This finding provides a new prospect of developing strategies for breaking the life cycle of this pest in pines and controlling pine wilt disease.
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Affiliation(s)
- Chihang Cheng
- Collaborative Innovation Center of Zhejiang Green Pesticide, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China
- School of Life Sciences, Huzhou University, Huzhou, 313000, China
| | - Jialing Qin
- Collaborative Innovation Center of Zhejiang Green Pesticide, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China
- State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China
| | - Choufei Wu
- Collaborative Innovation Center of Zhejiang Green Pesticide, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China
- School of Life Sciences, Huzhou University, Huzhou, 313000, China
| | - Mengying Lei
- Guangdong Eco-Engineering Polytechnic, Guangdong, 510520, China
| | - Yongjun Wang
- Collaborative Innovation Center of Zhejiang Green Pesticide, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China.
- State Key Laboratory of Subtropical Silviculture, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China.
| | - Liqin Zhang
- Collaborative Innovation Center of Zhejiang Green Pesticide, School of Forestry and Biotechnology, Zhejiang A&F University, Hangzhou, 311300, China.
- School of Life Sciences, Huzhou University, Huzhou, 313000, China.
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Potent Attractant for Root-Knot Nematodes in Exudates from Seedling Root Tips of Two Host Species. Sci Rep 2018; 8:10847. [PMID: 30022095 PMCID: PMC6052019 DOI: 10.1038/s41598-018-29165-4] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 07/06/2018] [Indexed: 11/24/2022] Open
Abstract
Root-knot nematodes (RKN; Meloidogyne spp.) can parasitize over 2,000 plant species and are generally considered to be the most agriculturally damaging group of plant-parasitic nematodes worldwide. Infective juveniles (J2) are non-feeding and must locate and invade a host before their reserves are depleted. However, what attracts J2 to appropriate root entry sites is not known. An aim of this research is to identify semiochemicals that attract RKN to roots. J2 of the three RKN species tested are highly attracted to root tips of both tomato and Medicago truncatula. For both hosts, mutants defective in ethylene signaling were found to be more attractive than those of wild type. We determined that cell-free exudates collected from tomato and M. truncatula seedling root tips were highly attractive to M. javanica J2. Using a pluronic gel-based microassay to monitor chemical fractionation, we determined that for both plant species the active component fractionated similarly and had a mass of ~400 based on size-exclusion chromatography. This characterization is a first step toward identification of a potent and specific attractant from host roots that attracts RKN. Such a compound is potentially a valuable tool for developing novel and safe control strategies.
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Fleming TR, Maule AG, Fleming CC. Chemosensory Responses of Plant Parasitic Nematodes to Selected Phytochemicals Reveal Long-Term Habituation Traits. J Nematol 2017; 49:462-471. [PMID: 29353936 PMCID: PMC5770295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2017] [Indexed: 06/07/2023] Open
Abstract
Plant parasitic nematodes (PPN) are important crop pests within the global agri-sector. Critical to their success is a complex and highly sensitive chemosensory system used to locate plants by detecting host cues. In addition to this, the nematode neuronal system has evolved mechanisms to allow adaptation to a changing environment. Clearly, there is a need to better understand the host-parasite relationship and the mechanisms by which PPN successfully locate and infect host plants. Here, we demonstrate the chemotactic response of two economically important PPN species, Meloidogyne incognita and Globodera pallida to selected phytochemicals. We further reveal an adapted chemotactic response in M. incognita second-stage juveniles preexposed to ethephon (Eth), potato root diffusate (PRD), and salicylic acid (SA), and present pharmacological evidence supporting the existence of long-term habituation traits acting via serotonergic-dependent neurotransmission.
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Affiliation(s)
- Thomas R Fleming
- Microbes & Pathogen Biology, Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Belfast BT9 7BL, United Kingdom
| | - Aaron G Maule
- Microbes & Pathogen Biology, Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Belfast BT9 7BL, United Kingdom
| | - Colin C Fleming
- Microbes & Pathogen Biology, Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, Belfast BT9 7BL, United Kingdom
- Agri-Food and Biosciences Institute, Belfast BT9 5PX, United Kingdom
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45
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Tran A, Tang A, O'Loughlin CT, Balistreri A, Chang E, Coto Villa D, Li J, Varshney A, Jimenez V, Pyle J, Tsujimoto B, Wellbrook C, Vargas C, Duong A, Ali N, Matthews SY, Levinson S, Woldemariam S, Khuri S, Bremer M, Eggers DK, L'Etoile N, Miller Conrad LC, VanHoven MK. C. elegans avoids toxin-producing Streptomyces using a seven transmembrane domain chemosensory receptor. eLife 2017; 6. [PMID: 28873053 PMCID: PMC5584987 DOI: 10.7554/elife.23770] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2016] [Accepted: 08/21/2017] [Indexed: 11/13/2022] Open
Abstract
Predators and prey co-evolve, each maximizing their own fitness, but the effects of predator–prey interactions on cellular and molecular machinery are poorly understood. Here, we study this process using the predator Caenorhabditis elegans and the bacterial prey Streptomyces, which have evolved a powerful defense: the production of nematicides. We demonstrate that upon exposure to Streptomyces at their head or tail, nematodes display an escape response that is mediated by bacterially produced cues. Avoidance requires a predicted G-protein-coupled receptor, SRB-6, which is expressed in five types of amphid and phasmid chemosensory neurons. We establish that species of Streptomyces secrete dodecanoic acid, which is sensed by SRB-6. This behavioral adaptation represents an important strategy for the nematode, which utilizes specialized sensory organs and a chemoreceptor that is tuned to recognize the bacteria. These findings provide a window into the molecules and organs used in the coevolutionary arms race between predator and potential prey.
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Affiliation(s)
- Alan Tran
- Department of Biological Sciences, San Jose State University, California, United States
| | - Angelina Tang
- Department of Biological Sciences, San Jose State University, California, United States
| | - Colleen T O'Loughlin
- Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, United States
| | - Anthony Balistreri
- Department of Chemistry, San Jose State University, California, United States
| | - Eric Chang
- Department of Biological Sciences, San Jose State University, California, United States
| | - Doris Coto Villa
- Department of Biological Sciences, San Jose State University, California, United States
| | - Joy Li
- Department of Biological Sciences, San Jose State University, California, United States
| | - Aruna Varshney
- Department of Biological Sciences, San Jose State University, California, United States
| | - Vanessa Jimenez
- Department of Biological Sciences, San Jose State University, California, United States
| | - Jacqueline Pyle
- Department of Biological Sciences, San Jose State University, California, United States
| | - Bryan Tsujimoto
- Department of Biological Sciences, San Jose State University, California, United States
| | - Christopher Wellbrook
- Department of Biological Sciences, San Jose State University, California, United States
| | - Christopher Vargas
- Department of Biological Sciences, San Jose State University, California, United States
| | - Alex Duong
- Department of Biological Sciences, San Jose State University, California, United States
| | - Nebat Ali
- Department of Biological Sciences, San Jose State University, California, United States
| | - Sarah Y Matthews
- Department of Chemistry, San Jose State University, California, United States
| | - Samantha Levinson
- Department of Chemistry, San Jose State University, California, United States
| | - Sarah Woldemariam
- Department of Cell & Tissue Biology, University of California San Francisco, San Francisco, United States
| | - Sami Khuri
- Department of Computer Science, San Jose State University, California, United States
| | - Martina Bremer
- Department of Mathematics and Statistics, San Jose State University, California, United States
| | - Daryl K Eggers
- Department of Chemistry, San Jose State University, California, United States
| | - Noelle L'Etoile
- Department of Cell & Tissue Biology, University of California San Francisco, San Francisco, United States
| | | | - Miri K VanHoven
- Department of Biological Sciences, San Jose State University, California, United States
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46
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Hosoi A, Katsuyama T, Sasaki Y, Kondo T, Yajima S, Ito S. Nitrate analogs as attractants for soybean cyst nematode. Biosci Biotechnol Biochem 2017; 81:1542-1547. [PMID: 28593809 DOI: 10.1080/09168451.2017.1332980] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 05/11/2017] [Indexed: 10/19/2022]
Abstract
Soybean cyst nematode (SCN) Heterodera glycines Ichinohe, a plant parasite, is one of the most serious pests of soybean. In this paper, we report that SCN is attracted to nitrate and its analogs. We performed attraction assays to screen for novel attractants for SCN and found that nitrates were attractants for SCN and SCN recognized nitrate gradients. However, attraction of SCN to nitrates was not observed on agar containing nitrate. To further elucidate the attraction mechanism in SCN, we performed attraction assays using nitrate analogs ([Formula: see text], [Formula: see text], [Formula: see text]). SCN was attracted to all nitrate analogs; however, attraction of SCN to nitrate analogs was not observed on agar containing nitrate. In contrast, SCN was attracted to azuki root, irrespective of presence or absence of nitrate in agar media. Our results suggest that the attraction mechanisms differ between plant-derived attractant and nitrate.
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Affiliation(s)
- Akito Hosoi
- a Department of Bioscience , Tokyo University of Agriculture , Tokyo , Japan
| | - Tsutomu Katsuyama
- a Department of Bioscience , Tokyo University of Agriculture , Tokyo , Japan
| | - Yasuyuki Sasaki
- a Department of Bioscience , Tokyo University of Agriculture , Tokyo , Japan
| | - Tatsuhiko Kondo
- b Graduate School of Bioagricultural Sciences, Nagoya University , Nagoya , Japan
| | - Shunsuke Yajima
- a Department of Bioscience , Tokyo University of Agriculture , Tokyo , Japan
| | - Shinsaku Ito
- a Department of Bioscience , Tokyo University of Agriculture , Tokyo , Japan
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47
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Massalha H, Korenblum E, Tholl D, Aharoni A. Small molecules below-ground: the role of specialized metabolites in the rhizosphere. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2017; 90:788-807. [PMID: 28333395 DOI: 10.1111/tpj.13543] [Citation(s) in RCA: 113] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Revised: 03/17/2017] [Accepted: 03/21/2017] [Indexed: 05/18/2023]
Abstract
Soil communities are diverse taxonomically and functionally. This ecosystem experiences highly complex networks of interactions, but may also present functionally independent entities. Plant roots, a metabolically active hotspot in the soil, take an essential part in below-ground interactions. While plants are known to release an extremely high portion of the fixated carbon to the soil, less information is known about the composition and role of C-containing compounds in the rhizosphere, in particular those involved in chemical communication. Specialized metabolites (or secondary metabolites) produced by plants and their associated microbes have a critical role in various biological activities that modulate the behavior of neighboring organisms. Thus, elucidating the chemical composition and function of specialized metabolites in the rhizosphere is a key element in understanding interactions in this below-ground environment. Here, we review key classes of specialized metabolites that occur as mostly non-volatile compounds in root exudates or are emitted as volatile organic compounds (VOCs). The role of these metabolites in below-ground interactions and response to nutrient deficiency, as well as their tissue and cell type-specific biosynthesis and release are discussed in detail.
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Affiliation(s)
- Hassan Massalha
- Department of Plant Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Elisa Korenblum
- Department of Plant Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Dorothea Tholl
- Department of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA, 24061, USA
| | - Asaph Aharoni
- Department of Plant Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
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48
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Hu Y, You J, Li C, Williamson VM, Wang C. Ethylene response pathway modulates attractiveness of plant roots to soybean cyst nematode Heterodera glycines. Sci Rep 2017; 7:41282. [PMID: 28112257 PMCID: PMC5256374 DOI: 10.1038/srep41282] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Accepted: 12/19/2016] [Indexed: 12/12/2022] Open
Abstract
Plant parasitic nematodes respond to root exudates to locate their host roots. In our studies second stage juveniles of Heterodera glycines, the soybean cyst nematode (SCN), quickly migrated to soybean roots in Pluronic F-127 gel. Roots of soybean and non-host Arabidopsis treated with the ethylene (ET)-synthesis inhibitor aminoethoxyvinylglycine (AVG) were more attractive to SCN than untreated roots, and significantly more nematodes penetrated into roots. Moreover, Arabidopsis ET insensitive mutants (ein2, ein2-1, ein2-5, ein3-1, ein5-1, and ein6) were more attractive than wild-type plants. Conversely, the constitutive triple-response mutant ctr1-1, was less attractive to SCN. While ET receptor gain-of-function mutant ein4-1 attracted more SCN than the wild-type, there were no significant differences in attractiveness between another gain-of-function ET receptor mutant, etr1-3, or the loss-of-function mutants etr1-7 and ers1-3 and the wild type. Expression of the reporter construct EBS: β-glucuronidase (GUS) was detected in Arabidopsis root tips as early as 6 h post infection, indicating that ET signaling was activated in Arabidopsis early by SCN infection. These results suggest that an active ET signaling pathway reduces root attractiveness to SCN in a way similar to that reported for root-knot nematodes, but opposite to that suggested for the sugar beet cyst nematode Heterodera schachtii.
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Affiliation(s)
- Yanfeng Hu
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin 150081 China
| | - Jia You
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin 150081 China
| | - Chunjie Li
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin 150081 China
| | | | - Congli Wang
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin 150081 China
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49
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Olfactory circuits and behaviors of nematodes. Curr Opin Neurobiol 2016; 41:136-148. [PMID: 27668755 DOI: 10.1016/j.conb.2016.09.002] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2016] [Revised: 08/19/2016] [Accepted: 09/05/2016] [Indexed: 12/29/2022]
Abstract
Over one billion people worldwide are infected with parasitic nematodes. Many parasitic nematodes actively search for hosts to infect using volatile chemical cues, so understanding the olfactory signals that drive host seeking may elucidate new pathways for preventing infections. The free-living nematode Caenorhabditis elegans is a powerful model for parasitic nematodes: because sensory neuroanatomy is conserved across nematode species, an understanding of the microcircuits that mediate olfaction in C. elegans may inform studies of olfaction in parasitic nematodes. Here we review circuit mechanisms that allow C. elegans to respond to odorants, gases, and pheromones. We also highlight work on the olfactory behaviors of parasitic nematodes that lays the groundwork for future studies of their olfactory microcircuits.
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50
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Somvanshi VS, Gahoi S, Banakar P, Thakur PK, Kumar M, Sajnani M, Pandey P, Rao U. A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica. BMC Genomics 2016; 17:166. [PMID: 26931371 PMCID: PMC4774024 DOI: 10.1186/s12864-016-2510-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2015] [Accepted: 02/22/2016] [Indexed: 01/02/2023] Open
Abstract
Background Nematodes are the most numerous animals in the soil. Insect parasitic nematodes of the genus Heterorhabditis are capable of selectively seeking, infecting and killing their insect-hosts in the soil. The infective juvenile (IJ) stage of the Heterorhabditis nematodes is analogous to Caenorhabditis elegans dauer juvenile stage, which remains in ‘arrested development’ till it finds and infects a new insect-host in the soil. H. indica is the most prevalent species of Heterorhabditis in India. To understand the genes and molecular processes that govern the biology of the IJ stage, and to create a resource to facilitate functional genomics and genetic exploration, we sequenced the transcriptome of H. indica IJs. Results The de-novo sequence assembly using Velvet-Oases pipeline resulted in 13,593 unique transcripts at N50 of 1,371 bp, of which 53 % were annotated by blastx. H. indica transcripts showed higher orthology with parasitic nematodes as compared to free living nematodes. In-silico expression analysis showed 30 % of transcripts expressing with ≥100 FPKM value. All the four canonical dauer formation pathways like cGMP-PKG, insulin, dafachronic acid and TGF-β were active in the IJ stage. Several other signaling pathways were highly represented in the transcriptome. Twenty-four orthologs of C. elegans RNAi pathway effector genes were discovered in H. indica, including nrde-3 that is reported for the first time in any of the parasitic nematodes. An ortholog of C. elegans tol-1 was also identified. Further, 272 kinases belonging to 137 groups, and several previously unidentified members of important gene classes were identified. Conclusions We generated high-quality transcriptome sequence data from H. indica IJs for the first time. The transcripts showed high similarity with the parasitic nematodes, M. hapla, and A. suum as opposed to C. elegans, a species to which H. indica is more closely related. The high representation of transcripts from several signaling pathways in the IJs indicates that despite being a developmentally arrested stage; IJs are a hotbed of signaling and are actively interacting with their environment. Electronic supplementary material The online version of this article (doi:10.1186/s12864-016-2510-z) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Vishal S Somvanshi
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Shachi Gahoi
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Prakash Banakar
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Prasoon Kumar Thakur
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Mukesh Kumar
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Manisha Sajnani
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Priyatama Pandey
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
| | - Uma Rao
- Division of Nematology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
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