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Reid CR. Thoughts from the forest floor: a review of cognition in the slime mould Physarum polycephalum. Anim Cogn 2023; 26:1783-1797. [PMID: 37166523 PMCID: PMC10770251 DOI: 10.1007/s10071-023-01782-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 04/27/2023] [Accepted: 04/28/2023] [Indexed: 05/12/2023]
Abstract
Sensing, communication, navigation, decision-making, memory and learning are key components in a standard cognitive tool-kit that enhance an animal's ability to successfully survive and reproduce. However, these tools are not only useful for, or accessible to, animals-they evolved long ago in simpler organisms using mechanisms which may be either unique or widely conserved across diverse taxa. In this article, I review the recent research that demonstrates these key cognitive abilities in the plasmodial slime mould Physarum polycephalum, which has emerged as a model for non-animal cognition. I discuss the benefits and limitations of comparisons drawn between neural and non-neural systems, and the implications of common mechanisms across wide taxonomic divisions. I conclude by discussing future avenues of research that will draw the most benefit from a closer integration of Physarum and animal cognition research.
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Affiliation(s)
- Chris R Reid
- School of Natural Sciences, Macquarie University, North Ryde, NSW, 2109, Australia.
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2
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Lecointre G, Aish A, Améziane N, Chekchak T, Goupil C, Grandcolas P, Vincent JFV, Sun JS. Revisiting Nature's "Unifying Patterns": A Biological Appraisal. Biomimetics (Basel) 2023; 8:362. [PMID: 37622967 PMCID: PMC10452652 DOI: 10.3390/biomimetics8040362] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/03/2023] [Accepted: 08/08/2023] [Indexed: 08/26/2023] Open
Abstract
Effective bioinspiration requires dialogue between designers and biologists, and this dialogue must be rooted in a shared scientific understanding of living systems. To support learning from "nature's overarching design lessons" the Biomimicry Institute has produced ten "Unifying Patterns of Nature". These patterns have been developed to engage with those interested in finding biologically inspired solutions to human challenges. Yet, although well-intentioned and appealing, they are likely to dishearten biologists. The aim of this paper is to identify why and propose alternative principles based on evolutionary theory.
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Affiliation(s)
- Guillaume Lecointre
- Institut de Systématique, Évolution et Biodiversité, UMR ISYEB 7205 CNRS MNHN SU EPHE UA, Muséum National d’Histoire Naturelle, CP 50, 45 Rue Buffon, 75005 Paris, France
| | - Annabelle Aish
- Bioinspire-Museum, Direction Générale Déléguée à la Recherche, l’Expertise, la Valorisation et l’Enseignement (DGD REVE), Muséum National d’Histoire Naturelle, 57 Rue Cuvier, CP 17, 75005 Paris, France
| | - Nadia Améziane
- Institut de Systématique, Évolution et Biodiversité, UMR ISYEB 7205 CNRS MNHN SU EPHE UA, Muséum National d’Histoire Naturelle, CP 50, 45 Rue Buffon, 75005 Paris, France
| | - Tarik Chekchak
- Institut des Futurs Souhaitables, 127 Avenue Ledru Rollin, 75011 Paris, France
| | - Christophe Goupil
- Laboratoire Interdisciplinaire des Énergies de Demain (LIED), UMR 8236 CNRS, Université Paris-Cité, 75013 Paris, France
| | - Philippe Grandcolas
- Institut de Systématique, Évolution et Biodiversité, UMR ISYEB 7205 CNRS MNHN SU EPHE UA, Muséum National d’Histoire Naturelle, CP 50, 45 Rue Buffon, 75005 Paris, France
| | - Julian F. V. Vincent
- Nature Inspired Manufacturing Centre, School of Engineering, Heriot-Watt University, Edinburgh EH14 4AS, UK
| | - Jian-Sheng Sun
- Structure et Instabilité des Génomes, UMR 7196—U1154, MNHN CNRS INSERM, Muséum National d’Histoire Naturelle, 43 Rue Cuvier, 75005 Paris, France
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3
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Cristancho S, Thompson G. Building Resilient Healthcare Teams: Insights from Analogy to the Social Biology of Ants, Honey Bees and Other Social Insects. PERSPECTIVES ON MEDICAL EDUCATION 2023; 12:253-260. [PMID: 37397182 PMCID: PMC10312249 DOI: 10.5334/pme.1051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 06/19/2023] [Indexed: 07/04/2023]
Abstract
The resilience of a healthcare system hinges on the adaptability of its teams. Thus far, healthcare teams have relied on well-defined scopes of practice to fulfill their safety mandate. While this feature has proven effective when dealing with stable situations, when it comes to disruptive events, healthcare teams find themselves navigating a fine balance between safety and resilience. Therefore, a better understanding of how the safety vs resilience trade-off varies under different circumstances is necessary if we are to promote and better train for resilience in modern healthcare teams. In this paper, we aim to bring awareness to the sociobiology analogy that healthcare teams might find useful during moments when safety and adaptability have the potential to conflict. Three principles underpin the sociobiology analogy: communication, decentralization, and plasticity. Of particular interest in this paper is plasticity whereby swapping roles or tasks becomes an adaptive, rather than a maladaptive, response teams could embrace when facing disruptive situations. While plasticity has naturally evolved in social insects, infusing plasticity in healthcare teams requires intentional training. Inspired by the sociobiology analogy, such training must value the ability: a) to read each other's cues and miscues, b) to step aside when others had the necessary skills, even if outside their scope, c) to deviate from protocols, and d) to foster cross-training. If the goal is to increase a team's behavioural flexibility and boost their resilience, this training mindset should become second nature.
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Affiliation(s)
- Sayra Cristancho
- Dept. of Surgery and Centre for Education Research & Innovation (CERI), The University of Western Ontario, Canada
| | - Graham Thompson
- Department of Biology, Faculty of Science, The University of Western Ontario, Canada
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4
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A Single-Pheromone Model Accounts for Empirical Patterns of Ant Colony Foraging Previously Modeled Using Two Pheromones. COGN SYST RES 2023. [DOI: 10.1016/j.cogsys.2023.02.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
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5
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Bles O, Deneubourg JL, Sueur C, Nicolis SC. A Data-Driven Simulation of the Trophallactic Network and Intranidal Food Flow Dissemination in Ants. Animals (Basel) 2022; 12:2963. [PMID: 36359087 PMCID: PMC9655576 DOI: 10.3390/ani12212963] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 10/24/2022] [Accepted: 10/25/2022] [Indexed: 09/29/2023] Open
Abstract
Food sharing can occur in both social and non-social species, but it is crucial in eusocial species, in which only some group members collect food. This food collection and the intranidal (i.e., inside the nest) food distribution through trophallactic (i.e., mouth-to-mouth) exchanges are fundamental in eusocial insects. However, the behavioural rules underlying the regulation and the dynamics of food intake and the resulting networks of exchange are poorly understood. In this study, we provide new insights into the behavioural rules underlying the structure of trophallactic networks and food dissemination dynamics within the colony. We build a simple data-driven model that implements interindividual variability and the division of labour to investigate the processes of food accumulation/dissemination inside the nest, both at the individual and collective levels. We also test the alternative hypotheses (no variability and no division of labour). The division of labour, combined with inter-individual variability, leads to predictions of the food dynamics and exchange networks that run, contrary to the other models. Our results suggest a link between the interindividual heterogeneity of the trophallactic behaviours, the food flow dynamics and the network of trophallactic events. Our results show that a slight level of heterogeneity in the number of trophallactic events is enough to generate the properties of the experimental networks and seems to be crucial for the creation of efficient trophallactic networks. Despite the relative simplicity of the model rules, efficient trophallactic networks may emerge as the networks observed in ants, leading to a better understanding of the evolution of self-organisation in such societies.
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Affiliation(s)
- Olivier Bles
- Center for Nonlinear Phenomena and Complex Systems (Cenoli)—CP 231, Université Libre de Bruxelles (ULB), B-1050 Bruxelles, Belgium
| | - Jean-Louis Deneubourg
- Center for Nonlinear Phenomena and Complex Systems (Cenoli)—CP 231, Université Libre de Bruxelles (ULB), B-1050 Bruxelles, Belgium
| | - Cédric Sueur
- Université de Strasbourg, CNRS (Centre National de la Recherche Scientifique), IPHC (Institut Pluridisciplinaire Hubert Curien), UMR 7178, 67000 Strasbourg, France
- Institut Universitaire de France, 75005 Paris, France
| | - Stamatios C. Nicolis
- Center for Nonlinear Phenomena and Complex Systems (Cenoli)—CP 231, Université Libre de Bruxelles (ULB), B-1050 Bruxelles, Belgium
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6
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Age-based spatial distribution of workers is resilient to worker loss in a subterranean termite. Sci Rep 2022; 12:7837. [PMID: 35552445 PMCID: PMC9098853 DOI: 10.1038/s41598-022-11512-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 04/18/2022] [Indexed: 01/13/2023] Open
Abstract
Elaborate task allocation is key to the ecological success of eusocial insects. Termite colonies are known for exhibiting age polyethism, with older instars more likely to depart the reproductive center to access food. However, it remains unknown how termites retain this spatial structure against external disturbances. Here we show that a subterranean termite Coptotermes formosanus Shiraki combines age polyethism and behavioral flexibility to maintain a constant worker proportion at the food area. Since this termite inhabits multiple wood pieces by connecting them through underground tunnels, disastrous colony splitting events can result in the loss of colony members. We simulated this via weekly removal of all individuals at the food area. Our results showed that termites maintained a worker proportion of ~ 20% at the food area regardless of changes in total colony size and demographic composition, where younger workers replaced food acquisition functions to maintain a constant worker proportion at the food area. Food consumption analysis revealed that the per-capita food consumption rate decreased with younger workers, but the colony did not compensate for the deficiency by increasing the proportion of workers at the feeding site. These results suggest that termite colonies prioritize risk management of colony fragmentation while maintaining suitable food acquisition efficiency with the next available workers in the colony, highlighting the importance of task allocation for colony resiliency under fluctuating environments.
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When being flexible matters: Ecological underpinnings for the evolution of collective flexibility and task allocation. Proc Natl Acad Sci U S A 2022; 119:e2116066119. [PMID: 35486699 PMCID: PMC9170069 DOI: 10.1073/pnas.2116066119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
A central problem in evolutionary biology is explaining variation in the organization of task allocation across collective systems. Why do human cells irreversibly adopt a task during development (e.g., kidney vs. liver cell), while sponge cells switch between different cell types? And why have only some ant species evolved specialized castes of workers for particular tasks? Although it seems reasonable to suppose that such differences reflect, at least partially, the different ecological pressures that systems face, there is no general understanding of how a system’s dynamic environment shapes its task allocation. To this end, we develop a general mathematical framework that reveals how simple ecological considerations could potentially explain cross-system variation in task allocation—including in flexibility, specialization, and (in)activity. Task allocation is a central feature of collective organization. Living collective systems, such as multicellular organisms or social insect colonies, have evolved diverse ways to allocate individuals to different tasks, ranging from rigid, inflexible task allocation that is not adjusted to changing circumstances to more fluid, flexible task allocation that is rapidly adjusted to the external environment. While the mechanisms underlying task allocation have been intensely studied, it remains poorly understood whether differences in the flexibility of task allocation can be viewed as adaptive responses to different ecological contexts—for example, different degrees of temporal variability. Motivated by this question, we develop an analytically tractable mathematical framework to explore the evolution of task allocation in dynamic environments. We find that collective flexibility is not necessarily always adaptive, and fails to evolve in environments that change too slowly (relative to how long tasks can be left unattended) or too quickly (relative to how rapidly task allocation can be adjusted). We further employ the framework to investigate how environmental variability impacts the internal organization of task allocation, which allows us to propose adaptive explanations for some puzzling empirical observations, such as seemingly unnecessary task switching under constant environmental conditions, apparent task specialization without efficiency benefits, and high levels of individual inactivity. Altogether, this work provides a general framework for probing the evolved diversity of task allocation strategies in nature and reinforces the idea that considering a system’s ecology is crucial to explaining its collective organization.
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8
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Vyas M, Parepally SK, Kamala Jayanthi PD. Is the Natural Instinct to Oviposit in Mated Female Oriental Fruit Fly, Bactrocera dorsalis More of a Brain-Independent Act? Front Physiol 2022; 13:800441. [PMID: 35360250 PMCID: PMC8964073 DOI: 10.3389/fphys.2022.800441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2021] [Accepted: 02/01/2022] [Indexed: 11/23/2022] Open
Abstract
What physiological and neuro-molecular changes control the female oviposition behavior post-mating in insects? The molecular changes that occur in a gravid female insect are difficult to dissect out considering the distinct behavioral patterns displayed by different insect groups. To understand the role of the brain center in Oriental fruit fly, Bactrocera dorsalis oviposition, egg-laying behavior was analyzed in γ-octalactone exposed, decapitated mated B. dorsalis females. Interestingly, the females displayed a possible urge to oviposit, which suggests a natural instinct to pass on the gene pool. Expression analysis of certain genes involved in oviposition behavior was also carried out in these insects to explore the molecular aspects of such behavior. This study tries to assess the involvement of brain center in egg-laying and also explore the role of certain neurotransmitter-related receptors in decapitated B. dorsalis oviposition behavior. Our results indicate that B. dorsalis oviposition behavior could potentially have a bypass route of neuronal control devoid of the brain. The study reported here establishes that decapitation in gravid females fails to abolish their ability to sense ovipositional cues and also to oviposit.
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9
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Better tired than lost: Turtle ant trail networks favor coherence over short edges. PLoS Comput Biol 2021; 17:e1009523. [PMID: 34673768 PMCID: PMC8562808 DOI: 10.1371/journal.pcbi.1009523] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 11/02/2021] [Accepted: 10/03/2021] [Indexed: 11/21/2022] Open
Abstract
Creating a routing backbone is a fundamental problem in both biology and engineering. The routing backbone of the trail networks of arboreal turtle ants (Cephalotes goniodontus) connects many nests and food sources using trail pheromone deposited by ants as they walk. Unlike species that forage on the ground, the trail networks of arboreal ants are constrained by the vegetation. We examined what objectives the trail networks meet by comparing the observed ant trail networks with networks of random, hypothetical trail networks in the same surrounding vegetation and with trails optimized for four objectives: minimizing path length, minimizing average edge length, minimizing number of nodes, and minimizing opportunities to get lost. The ants’ trails minimized path length by minimizing the number of nodes traversed rather than choosing short edges. In addition, the ants’ trails reduced the opportunity for ants to get lost at each node, favoring nodes with 3D configurations most likely to be reinforced by pheromone. Thus, rather than finding the shortest edges, turtle ant trail networks take advantage of natural variation in the environment to favor coherence, keeping the ants together on the trails. We investigated the trail networks of arboreal turtle ants in the canopy of the tropical forest, to ask what characterizes the colony’s choice of foraging paths within the vegetation. We monitored day to day changes in the junctions and edges of trail networks of colonies in the dry forest of western Mexico. We compared the paths used by the ants to simulated random paths in the surrounding vegetation. We found that the paths of turtle ants prioritize coherence, keeping ants together on the trail, over minimizing the average edge length. The choice of paths reduces the number of junctions in the trail where ants could get lost, and favors junctions with a physical configuration that makes it likely that successive ants will reinforce the same path. Our work suggests that design principles that emphasize keeping information flow constrained to streamlined, coherent trails may be useful in human-designed distributed routing and transport networks or robot swarms.
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10
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Quque M, Bles O, Bénard A, Héraud A, Meunier B, Criscuolo F, Deneubourg JL, Sueur C. Hierarchical networks of food exchange in the black garden ant Lasius niger. INSECT SCIENCE 2021; 28:825-838. [PMID: 32306510 DOI: 10.1111/1744-7917.12792] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 04/05/2020] [Accepted: 04/07/2020] [Indexed: 06/11/2023]
Abstract
In most eusocial insects, the division of labor results in relatively few individuals foraging for the entire colony. Thus, the survival of the colony depends on its efficiency in meeting the nutritional needs of all its members. Here, we characterize the network topology of a eusocial insect to understand the role and centrality of each caste in this network during the process of food dissemination. We constructed trophallaxis networks from 34 food-exchange experiments in black garden ants (Lasius niger). We tested the influence of brood and colony size on (i) global indices at the network level (i.e., efficiency, resilience, centralization, and modularity) and (ii) individual values (i.e., degree, strength, betweenness, and the clustering coefficient). Network resilience, the ratio between global efficiency and centralization, was stable with colony size but increased in the presence of broods, presumably in response to the nutritional needs of larvae. Individual metrics highlighted the major role of foragers in food dissemination. In addition, a hierarchical clustering analysis suggested that some domestics acted as intermediaries between foragers and other domestics. Networks appeared to be hierarchical rather than random or centralized exclusively around foragers. Finally, our results suggested that networks emerging from social insect interactions can improve group performance and thus colony fitness.
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Affiliation(s)
- Martin Quque
- CNRS, IPHC, Université de Strasbourg, Strasbourg, UMR718, France
| | - Olivier Bles
- Centre for Nonlinear Phenomena and Complex Systems (Cenoli)-CP 231, Université libre de Bruxelles (ULB), Bruxelles, Belgium
| | | | - Amélie Héraud
- CNRS, IPHC, Université de Strasbourg, Strasbourg, UMR718, France
| | | | | | - Jean-Louis Deneubourg
- Centre for Nonlinear Phenomena and Complex Systems (Cenoli)-CP 231, Université libre de Bruxelles (ULB), Bruxelles, Belgium
| | - Cédric Sueur
- CNRS, IPHC, Université de Strasbourg, Strasbourg, UMR718, France
- Institut Universitaire de France, Paris, France
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11
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Podesta C, Coleman N, Esmalian A, Yuan F, Mostafavi A. Quantifying community resilience based on fluctuations in visits to points-of-interest derived from digital trace data. J R Soc Interface 2021; 18:20210158. [PMID: 33906388 PMCID: PMC8086905 DOI: 10.1098/rsif.2021.0158] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
This research establishes a methodological framework for quantifying community resilience based on fluctuations in a population's activity during a natural disaster. Visits to points-of-interests (POIs) over time serve as a proxy for activities to capture the combined effects of perturbations in lifestyles, the built environment and the status of business. This study used digital trace data related to unique visits to POIs in the Houston metropolitan area during Hurricane Harvey in 2017. Resilience metrics in the form of systemic impact, duration of impact, and general resilience (GR) values were examined for the region along with their spatial distributions. The results show that certain categories, such as religious organizations and building material and supplies dealers had better resilience metrics-low systemic impact, short duration of impact, and high GR. Other categories such as medical facilities and entertainment had worse resilience metrics-high systemic impact, long duration of impact and low GR. Spatial analyses revealed that areas in the community with lower levels of resilience metrics also experienced extensive flooding. This insight demonstrates the validity of the approach proposed in this study for quantifying and analysing data for community resilience patterns using digital trace/location-intelligence data related to population activities. While this study focused on the Houston metropolitan area and only analysed one natural hazard, the same approach could be applied to other communities and disaster contexts. Such resilience metrics bring valuable insight into prioritizing resource allocation in the recovery process.
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Affiliation(s)
- Cristian Podesta
- Urban Resilience.AI Lab, Zachry Department of Civil and Environmental Engineering, Texas A&M University, College Station, TX, USA
| | - Natalie Coleman
- Urban Resilience.AI Lab, Zachry Department of Civil and Environmental Engineering, Texas A&M University, College Station, TX, USA
| | - Amir Esmalian
- Urban Resilience.AI Lab, Zachry Department of Civil and Environmental Engineering, Texas A&M University, College Station, TX, USA
| | - Faxi Yuan
- Urban Resilience.AI Lab, Zachry Department of Civil and Environmental Engineering, Texas A&M University, College Station, TX, USA
| | - Ali Mostafavi
- Urban Resilience.AI Lab, Zachry Department of Civil and Environmental Engineering, Texas A&M University, College Station, TX, USA
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12
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Abstract
Human-designed infrastructures and networks relying on centralized or hierarchical control are susceptible to single-point catastrophic failure when disrupted. By contrast, most complex biological systems employ distributed control and can be more robust to perturbations. In field experiments with Eciton burchellii army ants, we show that scaffold structures, self-assembled by living ants, emerge in response to disrupted traffic on inclines, facilitating traffic flow and stemming losses of foragers and prey. Informed by our observations, we present a theoretical model based on proportional control and negative feedback, which may be relevant to many distributed systems in which group-level properties can be modified through individual error sensing and correction. The mechanism is simple, and ants only require information about their individual state. An inherent strength of evolved collective systems is their ability to rapidly adapt to dynamic environmental conditions, offering resilience in the face of disruption. This is thought to arise when individual sensory inputs are filtered through local interactions, producing an adaptive response at the group level. To understand how simple rules encoded at the individual level can lead to the emergence of robust group-level (or distributed) control, we examined structures we call “scaffolds,” self-assembled by Eciton burchellii army ants on inclined surfaces that aid travel during foraging and migration. We conducted field experiments with wild E. burchellii colonies, manipulating the slope over which ants traversed, to examine the formation of scaffolds and their effects on foraging traffic. Our results show that scaffolds regularly form on inclined surfaces and that they reduce losses of foragers and prey, by reducing slipping and/or falling of ants, thus facilitating traffic flow. We describe the relative effects of environmental geometry and traffic on their growth and present a theoretical model to examine how the individual behaviors underlying scaffold formation drive group-level effects. Our model describes scaffold growth as a control response at the collective level that can emerge from individual error correction, requiring no complex communication among ants. We show that this model captures the dynamics observed in our experiments and is able to predict the growth—and final size—of scaffolds, and we show how the analytical solution allows for estimation of these dynamics.
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13
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Cherian Varughese J, Hornischer H, Zahadat P, Thenius R, Wotawa F, Schmickl T. A swarm design paradigm unifying swarm behaviors using minimalistic communication. BIOINSPIRATION & BIOMIMETICS 2020; 15:036005. [PMID: 31971516 DOI: 10.1088/1748-3190/ab6ed9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Numerous nature inspired algorithms have been suggested to enable robotic swarms, mobile sensor networks and other multi-agent systems to exhibit various self-organized behaviors. Swarm intelligence and swarm robotics research have been underway for a few decades and have produced many such algorithms based on natural self-organizing systems. While a large body of research exists for variations and modifications in swarm intelligence algorithms, there have been few attempts to unify the underlying agent level design of these widely varying behaviors. In this work, a design paradigm for a swarm of agents is presented which can exhibit a wide range of collective behaviors at swarm level while using minimalistic single-bit communication at the agent level. The communication in the proposed paradigm is based on waves of 'ping'-signals inspired by strategies for communication and self organization of slime mold (Dictyostelium discoideum) and fireflies (lampyridae). The unification of common collective behaviors through this Wave Oriented Swarm Paradigm (WOSP) enables the control of swarms with minimalistic communication and yet allowing the emergence of diverse complex behaviors. It is demonstrated both in simulation and using real robotic experiments that even a single-bit communication channel between agents suffices for the design of a substantial set of behaviors. Ultimately, the reader will be enabled to combine different behaviours based on the paradigm to develop a control scheme for individual swarms.
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Affiliation(s)
- Joshua Cherian Varughese
- Department of Zoology, Institute of Biology, University of Graz, Graz, Austria. Institute of Software Technology, Graz University of Technology, Graz, Austria
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14
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Dong S, Wang H, Mostafavi A, Gao J. Robust component: a robustness measure that incorporates access to critical facilities under disruptions. J R Soc Interface 2019; 16:20190149. [PMID: 31387488 PMCID: PMC6731514 DOI: 10.1098/rsif.2019.0149] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Accepted: 06/27/2019] [Indexed: 11/12/2022] Open
Abstract
The objective of this paper is to integrate the post-disaster network access to critical facilities into the network robustness assessment, considering the geographical exposure of infrastructure to natural hazards. Conventional percolation modelling that uses generating function to measure network robustness fails to characterize spatial networks due to the degree correlation. In addition, the giant component alone is not sufficient to represent the performance of transportation networks in the post-disaster setting, especially in terms of the access to critical facilities (i.e. emergency services). Furthermore, the failure probability of various links in the face of different hazards needs to be encapsulated in simulation. To bridge this gap, this paper proposed the metric robust component and a probabilistic link-removal strategy to assess network robustness through a percolation-based simulation framework. A case study has been conducted on the Portland Metro road network during an M9.0 earthquake scenario. The results revealed how the number of critical facilities severely impacts network robustness. Besides, earthquake-induced failures led to a two-phase percolation transition in robustness performance. The proposed robust component metric and simulation scheme can be generalized into a wide range of scenarios, thus enabling engineers to pinpoint the impact of disastrous disruption on network robustness. This research can also be generalized to identify critical facilities and sites for future development.
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Affiliation(s)
- Shangjia Dong
- School of Civil and Construction Engineering, Oregon State University, Corvallis, OR 97331, USA
| | - Haizhong Wang
- School of Civil and Construction Engineering, Oregon State University, Corvallis, OR 97331, USA
| | - Ali Mostafavi
- Zachry Department of Civil Engineering, Texas A&M University, College Station, TX 77840, USA
| | - Jianxi Gao
- Department of Computer Science, Rensselaer Polytechnic Institute, Lally Hall 207, Troy, NY 12180, USA
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15
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Abstract
Nest choice in Temnothorax spp.; task allocation and the regulation of activity in Pheidole dentata, Pogonomyrmex barbatus, and Atta spp.; and trail networks in Monomorium pharaonis and Cephalotes goniodontus all provide examples of correspondences between the dynamics of the environment and the dynamics of collective behavior. Some important aspects of the dynamics of the environment include stability, the threat of rupture or disturbance, the ratio of inflow and outflow of resources or energy, and the distribution of resources. These correspond to the dynamics of collective behavior, including the extent of amplification, how feedback instigates and inhibits activity, and the extent to which the interactions that provide the information to regulate behavior are local or spatially centralized.
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Affiliation(s)
- Deborah M Gordon
- Department of Biology, Stanford University, Stanford, California 94305-5020, USA;
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16
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Schmickl T, Karsai I. Integral feedback control is at the core of task allocation and resilience of insect societies. Proc Natl Acad Sci U S A 2018; 115:13180-13185. [PMID: 30530662 PMCID: PMC6310805 DOI: 10.1073/pnas.1807684115] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Homeostatic self-regulation is a fundamental aspect of open dissipative systems. Integral feedback has been found to be important for homeostatic control on both the cellular and molecular levels of biological organization and in engineered systems. Analyzing the task allocation mechanisms of three insect societies, we identified a model of integral control residing at colony level. We characterized a general functional core mechanism, called the "common stomach," where a crucial shared substance for colony function self-regulates its own quantity via reallocating the colony's workforce, which collects and uses this substance. The central component in a redundant feedback network is the saturation level of this substance in the colony. An interaction network of positive and negative feedback loops ensures the homeostatic state of this substance and the workforce involved in processing this substance. Extensive sensitivity and stability analyses of the core model revealed that the system is very resilient against perturbations and compensates for specific types of stress that real colonies face in their ecosystems. The core regulation system is highly scalable, and due to its buffer function, it can filter noise and find a new equilibrium quickly after environmental (supply) or colony-state (demand) changes. The common stomach regulation system is an example of convergent evolution among the three different societies, and we predict that similar integral control regulation mechanisms have evolved frequently within natural complex systems.
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Affiliation(s)
- Thomas Schmickl
- Artificial Life Laboratory, Department of Zoology, Institute of Biology, Karl-Franzens-University Graz, A-8010 Graz, Austria
| | - Istvan Karsai
- Department of Biological Sciences, East Tennessee State University, Johnson City, TN 37614
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Curt C, Tacnet JM. Resilience of Critical Infrastructures: Review and Analysis of Current Approaches. RISK ANALYSIS : AN OFFICIAL PUBLICATION OF THE SOCIETY FOR RISK ANALYSIS 2018; 38:2441-2458. [PMID: 30102784 DOI: 10.1111/risa.13166] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Revised: 12/20/2017] [Accepted: 05/14/2018] [Indexed: 06/08/2023]
Abstract
In crisis situations, systems, organizations, and people must react and deal with events that are inherently unpredictable before they occur: vital societal functions and thus infrastructures must be restored or adapted as quickly as possible. This capacity refers to resilience. Progress concerning its conceptualization has been made but it remains difficult to assess and apply in practice. The results of this article stem from a literature review allowing the analysis of current advances in the development of proposals to improve the management of infrastructure resilience. The article: (i) identifies different dimensions of resilience; (ii) highlights current limits of assessing and controlling resilience; and (iii) proposes several directions for future research that could go beyond the current limits of resilience management, but subject to compliance with a number of constraints. These constraints are taking into account different hazards, cascade effects, and uncertain conditions, dealing with technical, organizational, economical, and human domains, and integrating temporal and spatial aspects.
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Affiliation(s)
- Corinne Curt
- Irstea, UR RECOVER, Centre d'Aix-en-Provence, 3275 Route de Cézanne, CS 40061, 13182, Aix-en-Provence Cedex 5, France
| | - Jean-Marc Tacnet
- University of Grenoble Alpes, Irstea, UR ETGR, Centre de Grenoble, 38402, St-Martin-d'Hères, France
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18
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Chandrasekhar A, Gordon DM, Navlakha S. A distributed algorithm to maintain and repair the trail networks of arboreal ants. Sci Rep 2018; 8:9297. [PMID: 29915325 PMCID: PMC6006367 DOI: 10.1038/s41598-018-27160-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Accepted: 05/24/2018] [Indexed: 11/09/2022] Open
Abstract
We study how the arboreal turtle ant (Cephalotes goniodontus) solves a fundamental computing problem: maintaining a trail network and finding alternative paths to route around broken links in the network. Turtle ants form a routing backbone of foraging trails linking several nests and temporary food sources. This species travels only in the trees, so their foraging trails are constrained to lie on a natural graph formed by overlapping branches and vines in the tangled canopy. Links between branches, however, can be ephemeral, easily destroyed by wind, rain, or animal movements. Here we report a biologically feasible distributed algorithm, parameterized using field data, that can plausibly describe how turtle ants maintain the routing backbone and find alternative paths to circumvent broken links in the backbone. We validate the ability of this probabilistic algorithm to circumvent simulated breaks in synthetic and real-world networks, and we derive an analytic explanation for why certain features are crucial to improve the algorithm's success. Our proposed algorithm uses fewer computational resources than common distributed graph search algorithms, and thus may be useful in other domains, such as for swarm computing or for coordinating molecular robots.
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Affiliation(s)
- Arjun Chandrasekhar
- The Salk Institute for Biological Studies, Integrative Biology Laboratory, La Jolla, CA, 92037, USA
| | - Deborah M Gordon
- Department of Biology, Stanford University, Stanford, CA, 94035, USA.
| | - Saket Navlakha
- The Salk Institute for Biological Studies, Integrative Biology Laboratory, La Jolla, CA, 92037, USA.
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19
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Re-wilding Collective Behaviour: An Ecological Perspective. Trends Ecol Evol 2018; 33:347-357. [DOI: 10.1016/j.tree.2018.03.004] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2017] [Revised: 03/07/2018] [Accepted: 03/08/2018] [Indexed: 02/08/2023]
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20
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Schmickl T, Karsai I. Resilience of honeybee colonies via common stomach: A model of self-regulation of foraging. PLoS One 2017; 12:e0188004. [PMID: 29161278 PMCID: PMC5697885 DOI: 10.1371/journal.pone.0188004] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Accepted: 10/30/2017] [Indexed: 02/04/2023] Open
Abstract
We propose a new regulation mechanism based on the idea of the "common stomach" to explain several aspects of the resilience and homeostatic regulation of honeybee colonies. This mechanism exploits shared pools of substances (pollen, nectar, workers, brood) that modulate recruitment, abandonment and allocation patterns at the colony-level and enable bees to perform several survival strategies to cope with difficult circumstances: Lack of proteins leads to reduced feeding of young brood, to early capping of old brood and to regaining of already spent proteins through brood cannibalism. We modeled this system by linear interaction terms and mass-action law. To test the predictive power of the model of this regulatory mechanism we compared our model predictions to experimental data of several studies. These comparisons show that the proposed regulation mechanism can explain a variety of colony level behaviors. Detailed analysis of the model revealed that these mechanisms could explain the resilience, stability and self-regulation observed in honeybee colonies. We found that manipulation of material flow and applying sudden perturbations to colony stocks are quickly compensated by a resulting counter-acting shift in task selection. Selective analysis of feedback loops allowed us to discriminate the importance of different feedback loops in self-regulation of honeybee colonies. We stress that a network of simple proximate mechanisms can explain significant colony-level abilities that can also be seen as ultimate reasoning of the evolutionary trajectory of honeybees.
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Affiliation(s)
- Thomas Schmickl
- Artificial Life Lab of the Department of Zoology, Karl-Franzens-University Graz, Graz, Austria
| | - Istvan Karsai
- Department of Biological Sciences, East Tennessee State University, Johnson City, TN, United States of America
- * E-mail:
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Qiu GH, Yang X, Zheng X, Huang C. The eukaryotic genome is structurally and functionally more like a social insect colony than a book. Epigenomics 2017; 9:1469-1483. [PMID: 28972397 DOI: 10.2217/epi-2017-0059] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023] Open
Abstract
Traditionally, the genome has been described as the 'book of life'. However, the metaphor of a book may not reflect the dynamic nature of the structure and function of the genome. In the eukaryotic genome, the number of centrally located protein-coding sequences is relatively constant across species, but the amount of noncoding DNA increases considerably with the increase of organismal evolutional complexity. Therefore, it has been hypothesized that the abundant peripheral noncoding DNA protects the genome and the central protein-coding sequences in the eukaryotic genome. Upon comparison with the habitation, sociality and defense mechanisms of a social insect colony, it is found that the genome is similar to a social insect colony in various aspects. A social insect colony may thus be a better metaphor than a book to describe the spatial organization and physical functions of the genome. The potential implications of the metaphor are also discussed.
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Affiliation(s)
- Guo-Hua Qiu
- Fujian Provincial Key Laboratory for the Prevention & Control of Animal Infectious Diseases & Biotechnology, College of Life Sciences, Longyan University, Longyan 364012, Fujian, PR China
| | - Xiaoyan Yang
- Fujian Provincial Key Laboratory for the Prevention & Control of Animal Infectious Diseases & Biotechnology, College of Life Sciences, Longyan University, Longyan 364012, Fujian, PR China
| | - Xintian Zheng
- Fujian Provincial Key Laboratory for the Prevention & Control of Animal Infectious Diseases & Biotechnology, College of Life Sciences, Longyan University, Longyan 364012, Fujian, PR China
| | - Cuiqin Huang
- Fujian Provincial Key Laboratory for the Prevention & Control of Animal Infectious Diseases & Biotechnology, College of Life Sciences, Longyan University, Longyan 364012, Fujian, PR China
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Gordon DM. Local Regulation of Trail Networks of the Arboreal Turtle Ant, Cephalotes goniodontus. Am Nat 2017; 190:E156-E169. [PMID: 29166159 DOI: 10.1086/693418] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
This study examines how an arboreal ant colony maintains, extends, and repairs its network of foraging trails and nests, built on a network of vegetation. Nodes are junctions where a branch forks off from another or where a branch of one plant touching another provides a new edge on which ants could travel. The ants' choice of edge at a node appears to be reinforced by trail pheromone. Ongoing pruning of the network tends to eliminate cycles and minimize the number of nodes and thus decision points, but not the distance traveled. At junctions, trails tend to stay on the same plant. In combination with the long internode lengths of the branches of vines in the tropical dry forest, this facilitates travel to food sources at the canopy edge. Exploration, when ants leave the trail on an edge that is not being used, makes both search and repair possible. The fewer the junctions between a location and the main trail, the more likely the ants are to arrive there. Ruptured trails are rapidly repaired with a new path, apparently using breadth-first search. The regulation of the network promotes its resilience and continuity.
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Charbonneau D, Sasaki T, Dornhaus A. Who needs 'lazy' workers? Inactive workers act as a 'reserve' labor force replacing active workers, but inactive workers are not replaced when they are removed. PLoS One 2017; 12:e0184074. [PMID: 28877229 PMCID: PMC5587300 DOI: 10.1371/journal.pone.0184074] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2016] [Accepted: 08/17/2017] [Indexed: 12/03/2022] Open
Abstract
Social insect colonies are highly successful, self-organized complex systems. Surprisingly however, most social insect colonies contain large numbers of highly inactive workers. Although this may seem inefficient, it may be that inactive workers actually contribute to colony function. Indeed, the most commonly proposed explanation for inactive workers is that they form a 'reserve' labor force that becomes active when needed, thus helping mitigate the effects of colony workload fluctuations or worker loss. Thus, it may be that inactive workers facilitate colony flexibility and resilience. However, this idea has not been empirically confirmed. Here we test whether colonies of Temnothorax rugatulus ants replace highly active (spending large proportions of time on specific tasks) or highly inactive (spending large proportions of time completely immobile) workers when they are experimentally removed. We show that colonies maintained pre-removal activity levels even after active workers were removed, and that previously inactive workers became active subsequent to the removal of active workers. Conversely, when inactive workers were removed, inactivity levels decreased and remained lower post-removal. Thus, colonies seem to have mechanisms for maintaining a certain number of active workers, but not a set number of inactive workers. The rapid replacement (within 1 week) of active workers suggests that the tasks they perform, mainly foraging and brood care, are necessary for colony function on short timescales. Conversely, the lack of replacement of inactive workers even 2 weeks after their removal suggests that any potential functions they have, including being a 'reserve', are less important, or auxiliary, and do not need immediate recovery. Thus, inactive workers act as a reserve labor force and may still play a role as food stores for the colony, but a role in facilitating colony-wide communication is unlikely. Our results are consistent with the often cited, but never yet empirically supported hypothesis that inactive workers act as a pool of 'reserve' labor that may allow colonies to quickly take advantage of novel resources and to mitigate worker loss.
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Affiliation(s)
- Daniel Charbonneau
- Graduate Interdisciplinary Program in Entomology & Insect Science, University of Arizona, Biological Sciences West, 1041 East Lowell, Tucson, AZ, United States of America
| | - Takao Sasaki
- Department of Zoology, University of Oxford, Oxford, United Kingdom
| | - Anna Dornhaus
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America
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Holt WV. Exploitation of Non-mammalian Model Organisms in Epigenetic Research. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2017; 1014:155-173. [DOI: 10.1007/978-3-319-62414-3_9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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25
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Hilbun A, Karsai I. Task Allocation of Wasps Governed by Common Stomach: A Model Based on Electric Circuits. PLoS One 2016; 11:e0167041. [PMID: 27861633 PMCID: PMC5115849 DOI: 10.1371/journal.pone.0167041] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2016] [Accepted: 11/08/2016] [Indexed: 11/18/2022] Open
Abstract
Simple regulatory mechanisms based on the idea of the saturable 'common stomach' can control the regulation of construction behavior and colony-level responses to environmental perturbations in Metapolybia wasp societies. We mapped the different task groups to mutual inductance electrical circuits and used Kirchoff's basic voltage laws to build a model that uses master equations from physics, yet is able to provide strong predictions for this complex biological phenomenon. Similar to real colonies, independently of the initial conditions, the system shortly sets into an equilibrium, which provides optimal task allocation for a steady construction, depending on the influx of accessible water. The system is very flexible and in the case of perturbations, it reallocates its workforce and adapts to the new situation with different equilibrium levels. Similar to the finding of field studies, decreasing any task groups caused decrease of construction; increasing or decreasing water inflow stimulated or reduced the work of other task groups while triggering compensatory behavior in water foragers. We also showed that only well connected circuits are able to produce adequate construction and this agrees with the finding that this type of task partitioning only exists in larger colonies. Studying the buffer properties of the common stomach and its effect on the foragers revealed that it provides stronger negative feedback to the water foragers, while the connection between the pulp foragers and the common stomach has a strong fixed-point attractor, as evidenced by the dissipative trajectory.
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Affiliation(s)
- Allison Hilbun
- Department of Biomedical Sciences, East Tennessee State University, Johnson City, Tennessee, United States of America
| | - Istvan Karsai
- Department of Biological Sciences, East Tennessee State University, Johnson City, Tennessee, United States of America
- * E-mail:
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