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Safarnejad A, Abbasi-Moayed S, Fahimi-Kashani N, Hormozi-Nezhad MR, Abdollahi H. Modeling and optimization of the ratio of fluorophores: a step towards enhancing the sensitivity of ratiometric probes. Mikrochim Acta 2024; 191:327. [PMID: 38740592 DOI: 10.1007/s00604-024-06403-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 05/01/2024] [Indexed: 05/16/2024]
Abstract
In the ratiometric fluorescent (RF) strategy, the selection of fluorophores and their respective ratios helps to create visual quantitative detection of target analytes. This study presents a framework for optimizing ratiometric probes, employing both two-component and three-component RF designs. For this purpose, in a two-component ratiometric nanoprobe designed for detecting methyl parathion (MP), an organophosphate pesticide, yellow-emissive thioglycolic acid-capped CdTe quantum dots (Y-QDs) (analyte-responsive), and blue-emissive carbon dots (CDs) (internal reference) were utilized. Mathematical polynomial equations modeled the emission profiles of CDs and Y-QDs in the absence of MP, as well as the emission colors of Y-QDs in the presence of MP separately. In other two-/three-component examples, the detection of dopamine hydrochloride (DA) was investigated using an RF design based on blue-emissive carbon dots (B-CDs) (internal reference) and N-acetyl L-cysteine functionalized CdTe quantum dots with red/green emission colors (R-QDs/G-QDs) (analyte-responsive). The colors of binary/ternary mixtures in the absence and presence of MP/DA were predicted using fitted equations and additive color theory. Finally, the Euclidean distance method in the normalized CIE XYZ color space calculated the distance between predicted colors, with the maximum distance defining the real-optimal concentration of fluorophores. This strategy offers a more efficient and precise method for determining optimal probe concentrations compared to a trial-and-error approach. The model's effectiveness was confirmed through experimental validation, affirming its efficacy.
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Affiliation(s)
- Azam Safarnejad
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan, 45137-66731, Iran
| | - Samira Abbasi-Moayed
- Department of Analytical Chemistry, Faculty of Chemistry, Kharazmi University, Tehran, 15719-14911, Iran
| | | | - Mohammad Reza Hormozi-Nezhad
- Department of Chemistry, Sharif University of Technology, Tehran, 11155-9516, Iran.
- Center for Nanoscience and Nanotechnology, Institute for Convergence Science & Technology, Sharif University of Technology, Tehran, 14588-89694, Iran.
| | - Hamid Abdollahi
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan, 45137-66731, Iran.
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2
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Kilinç Y, Zaman BT, Bakirdere S, Özdoğan N. Dual techniques for trace copper determination: DES/Dithizone based liquid phase microextraction-flame atomic absorption spectrophotometry and digital image based colorimetric probe. Food Chem 2024; 432:137244. [PMID: 37659325 DOI: 10.1016/j.foodchem.2023.137244] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2022] [Revised: 07/25/2023] [Accepted: 08/21/2023] [Indexed: 09/04/2023]
Abstract
In this study, a sample preparation procedure was developed to preconcentrate copper ions from aqueous samples for determination by flame atomic absorption spectrometry (FAAS) and digital image based colorimetry (DIC) systems. This was achieved by complexing copper ions with dithizone (Cu-DZ) and extracting the complex from aqueous solution in a single step. For the DES/DZ-FAAS system, a low detection limit of 2.3 ng mL-1 was recorded over a broad and linear working range. For the DIC system, the linear relationship between the change in red color intensity of the red-green-blue (RGB) color scale and the concentration of copper in the Cu-DZ complex was utilized for the validation of the method. The DIC system also recorded a broad and linear working range with a satisfactory detection limit of 14.7 ng mL-1. Spike recovery experiments performed with eucalyptus tea extracts yielded high recovery results in the range of 91-107%.
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Affiliation(s)
- Yağmur Kilinç
- Zonguldak Bülent Ecevit University, Institute of Science, Department of Environmental Engineering, 67100 Zonguldak, Türkiye
| | - Buse Tuğba Zaman
- Yıldız Technical University, Chemistry Department, 34210 İstanbul, Türkiye
| | - Sezgin Bakirdere
- Yıldız Technical University, Chemistry Department, 34210 İstanbul, Türkiye; Turkish Academy of Sciences (TÜBA), Vedat Dalokay Street, No: 112, 06670 Çankaya, Ankara, Türkiye.
| | - Nizamettin Özdoğan
- Zonguldak Bülent Ecevit University, Institute of Science, Department of Environmental Engineering, 67100 Zonguldak, Türkiye.
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3
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Borriello M, Tarabella G, D’Angelo P, Liboà A, Barra M, Vurro D, Lombari P, Coppola A, Mazzella E, Perna AF, Ingrosso D. Lab on a Chip Device for Diagnostic Evaluation and Management in Chronic Renal Disease: A Change Promoting Approach in the Patients' Follow Up. BIOSENSORS 2023; 13:373. [PMID: 36979584 PMCID: PMC10046018 DOI: 10.3390/bios13030373] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 03/06/2023] [Accepted: 03/10/2023] [Indexed: 06/18/2023]
Abstract
Lab-on-a-chip (LOC) systems are miniaturized devices aimed to perform one or several analyses, normally carried out in a laboratory setting, on a single chip. LOC systems have a wide application range, including diagnosis and clinical biochemistry. In a clinical setting, LOC systems can be associated with the Point-of-Care Testing (POCT) definition. POCT circumvents several steps in central laboratory testing, including specimen transportation and processing, resulting in a faster turnaround time. Provider access to rapid test results allows for prompt medical decision making, which can lead to improved patient outcomes, operational efficiencies, patient satisfaction, and even cost savings. These features are particularly attractive for healthcare settings dealing with complicated patients, such as those affected by chronic kidney disease (CKD). CKD is a pathological condition characterized by progressive and irreversible structural or functional kidney impairment lasting for more than three months. The disease displays an unavoidable tendency to progress to End Stage Renal Disease (ESRD), thus requiring renal replacement therapy, usually dialysis, and transplant. Cardiovascular disease (CVD) is the major cause of death in CKD, with a cardiovascular risk ten times higher in these patients than the rate observed in healthy subjects. The gradual decline of the kidney leads to the accumulation of uremic solutes, with negative effect on organs, especially on the cardiovascular system. The possibility to monitor CKD patients by using non-invasive and low-cost approaches could give advantages both to the patient outcome and sanitary costs. Despite their numerous advantages, POCT application in CKD management is not very common, even if a number of devices aimed at monitoring the CKD have been demonstrated worldwide at the lab scale by basic studies (low Technology Readiness Level, TRL). The reasons are related to both technological and clinical aspects. In this review, the main technologies for the design of LOCs are reported, as well as the available POCT devices for CKD monitoring, with a special focus on the most recent reliable applications in this field. Moreover, the current challenges in design and applications of LOCs in the clinical setting are briefly discussed.
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Affiliation(s)
- Margherita Borriello
- Department of Precision Medicine, University of Campania “Luigi Vanvitelli”, via L. De Crecchio, 7, 80138 Naples, Italy
| | | | | | - Aris Liboà
- IMEM-CNR, Parco Area delle Scienze 37/A, 43124 Parma, Italy; (G.T.)
| | - Mario Barra
- CNR-SPIN, c/o Dipartimento di Fisica “Ettore Pancini”, P.le Tecchio, 80, 80125 Naples, Italy
| | - Davide Vurro
- IMEM-CNR, Parco Area delle Scienze 37/A, 43124 Parma, Italy; (G.T.)
| | - Patrizia Lombari
- Department of Precision Medicine, University of Campania “Luigi Vanvitelli”, via L. De Crecchio, 7, 80138 Naples, Italy
| | - Annapaola Coppola
- Department of Precision Medicine, University of Campania “Luigi Vanvitelli”, via L. De Crecchio, 7, 80138 Naples, Italy
| | - Elvira Mazzella
- Department of Translational Medical Science, University of Campania “Luigi Vanvitelli”, via Via Pansini, Bldg 17, 80131 Naples, Italy
| | - Alessandra F. Perna
- Department of Translational Medical Science, University of Campania “Luigi Vanvitelli”, via Via Pansini, Bldg 17, 80131 Naples, Italy
| | - Diego Ingrosso
- Department of Precision Medicine, University of Campania “Luigi Vanvitelli”, via L. De Crecchio, 7, 80138 Naples, Italy
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4
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Saiz E, Banicevic I, Espinoza Torres S, Bertata S, Picasso G, O'Brien M, Radu A. Portable, low-cost, Raspberry Pi-based optical sensor (PiSENS): continuous monitoring of atmospheric nitrogen dioxide. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2023; 15:482-491. [PMID: 36606573 DOI: 10.1039/d2ay01433e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
We have developed a sensing system that utilizes a low-cost computer (Raspberry Pi) and its imaging camera as an optical sensing core for the continuous detection of NO2 in the air (PiSENS-A). The sensor is based on colour development as a consequence of the interaction of the gas with an absorbing solution. The PiSENS-A is thoroughly calibrated over the hourly mean which is used as one of the key metrics in evaluating air quality. The calibration was performed in the range of 0 < [NO2] < 476 μg m-3 chosen to contain the threshold used to determine compliance to the UK's Air Quality Standard Regulations (2010) expressed as a maximum of 18 permitted exceedances of [NO2]hourly mean = 200 μg per m3 per year. Lab-based measurements were evaluated against UV-vis. The average precision expressed as a relative standard deviation was: RSD% = 2.8%, while the correlation of mock samples was excellent (Pearson's r = 1.000). Field-based measurements were evaluated against chemiluminescence-based instrument exhibiting a correlation coefficient of R2 = 0.993. The PiSENS-A was also deployed as an independent air quality analyser at the Keele University campus.
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Affiliation(s)
- Ernesto Saiz
- Lennard-Jones Laboratories, Birchall Centre, Keele University, Keele, Staffordshire, ST5 5BG, UK.
| | - Ivana Banicevic
- Faculty of Technical Sciences, University of Montenegro, Montenegro
| | - Sergio Espinoza Torres
- Laboratory of Physical Chemistry Research, Faculty of Sciences, National University of Engineering, Av. Tupac Amaru 210, Lima 25, Peru
| | - Salma Bertata
- Lennard-Jones Laboratories, Birchall Centre, Keele University, Keele, Staffordshire, ST5 5BG, UK.
| | - Gino Picasso
- Laboratory of Physical Chemistry Research, Faculty of Sciences, National University of Engineering, Av. Tupac Amaru 210, Lima 25, Peru
| | - Matthew O'Brien
- Lennard-Jones Laboratories, Birchall Centre, Keele University, Keele, Staffordshire, ST5 5BG, UK.
| | - Aleksandar Radu
- School of Chemistry, Joseph Banks Laboratories, University of Lincoln, Green Lane, Lincoln, LN6 7DL, UK.
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5
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Ultra-fast pH determination with a new colorimetric pH-sensing hydrogel for biomedical and environmental applications. REACT FUNCT POLYM 2022. [DOI: 10.1016/j.reactfunctpolym.2022.105398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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6
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Arnold AM, Kennedy ZC, Hutchison JR. A simple, cost-effective colorimetric assay for aluminum ions via complexation with the flavonoid rutin. PEERJ ANALYTICAL CHEMISTRY 2022. [DOI: 10.7717/peerj-achem.19] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Aluminum has been linked to deleterious health effects with high concentration, chronic exposure, creating a need for innovative detection techniques. Colorimetric assays are an ideal approach since they are simple, cost-effective, and field adaptable. Yet, commercially available colorimetric assays for aluminum are limited since it forms few colored chelation complexes. Flavonoids, a class of polyphenolic compounds, are one of the few examples that create colored aluminum complexes. Aluminum ions (Al3+) are the main constituent in colorimetric assays for flavonoid detection in food or plant samples. Our assay design was based on colorimetric flavonoid assays, where the assay reported herein was optimized. Specifically, the flavonoid rutin concentration and sample-to-rutin volume ratio (295:5 µL) were optimized to detect Al3+ at low µM concentrations in samples. The assay performed comparably, and in some instances better, than those requiring advanced instrumentation and previously reported colorimetric assays, with a linear range (1–8 µM), sensitivity (7.6 nM), limit of detection (79.8 nM), and limit of quantification (266 nM) for Al3+. The colorimetric assay was accurate (99 ≤ 108 ± 4 ≤ 6% Al3+ recovery), precise (low intra- and inter-assay coefficient of variation (CV) of 3.1 ≤ 5.9% and 4.4%, respectively), and selective for Al3+ ions compared to solutions containing a variety of other mono-, di-, and tri-cations at much higher concentrations (10- to 100-fold higher). Lastly, the colorimetric assay was applicable to complex analysis. It was used to generate a chelation curve depicting the Al3+ chelation capacity of sodium alginate, a biologically derived polymer used as a bioink for 3D bioprinting.
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Affiliation(s)
- Anne M. Arnold
- National Security Directorate, Pacific Northwest National Laboratory, Richland, WA, United States of America
| | - Zachary C. Kennedy
- National Security Directorate, Pacific Northwest National Laboratory, Richland, WA, United States of America
| | - Janine R. Hutchison
- National Security Directorate, Pacific Northwest National Laboratory, Richland, WA, United States of America
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7
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Siribunbandal P, Kim YH, Osotchan T, Zhu Z, Jaisutti R. Quantitative Colorimetric Detection of Dissolved Ammonia Using Polydiacetylene Sensors Enabled by Machine Learning Classifiers. ACS OMEGA 2022; 7:18714-18721. [PMID: 35694520 PMCID: PMC9178764 DOI: 10.1021/acsomega.2c01419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 05/12/2022] [Indexed: 06/15/2023]
Abstract
Easy-to-use and on-site detection of dissolved ammonia are essential for managing aquatic ecosystems and aquaculture products since low levels of ammonia can cause serious health risks and harm aquatic life. This work demonstrates quantitative naked eye detection of dissolved ammonia based on polydiacetylene (PDA) sensors with machine learning classifiers. PDA vesicles were assembled from diacetylene monomers through a facile green chemical synthesis which exhibited a blue-to-red color transition upon exposure to dissolved ammonia and was detectable by the naked eye. The quantitative color change was studied by UV-vis spectroscopy, and it was found that the absorption peak at 640 nm gradually decreased, and the absorption peak at 540 nm increased with increasing ammonia concentration. The fabricated PDA sensor exhibited a detection limit of ammonia below 10 ppm with a response time of 20 min. Also, the PDA sensor could be stably operated for up to 60 days by storing in a refrigerator. Furthermore, the quantitative on-site monitoring of dissolved ammonia was investigated using colorimetric images with machine learning classifiers. Using a support vector machine for the machine learning model, the classification of ammonia concentration was possible with a high accuracy of 100 and 95.1% using color RGB images captured by a scanner and a smartphone, respectively. These results indicate that using the developed PDA sensor, a simple naked eye detection for dissolved ammonia is possible with higher accuracy and on-site detection enabled by the smartphone and machine learning processes.
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Affiliation(s)
- Papaorn Siribunbandal
- Department
of Physics, Faculty of Science and Technology, Thammasat University, Pathumthani 12121, Thailand
- Research
Unit in Innovative Sensors and Nanoelectronic Devices, Thammasat University, Pathumthani 12121, Thailand
| | - Yong-Hoon Kim
- School
of Advanced Materials Science and Engineering, Sungkyunkwan University, Suwon 16419, Korea
| | - Tanakorn Osotchan
- Department
of Physics, Faculty of Science, Mahidol
University, Bangkok 10400, Thailand
| | - Zhigang Zhu
- School
of Health Science and Engineering, University
of Shanghai for Science and Technology, Shanghai 200093, China
| | - Rawat Jaisutti
- Department
of Physics, Faculty of Science and Technology, Thammasat University, Pathumthani 12121, Thailand
- Research
Unit in Innovative Sensors and Nanoelectronic Devices, Thammasat University, Pathumthani 12121, Thailand
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8
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Yang L, Liu Y, Yue M, Li P, Liu Y, Ye F, Fu Y. A Multifunctional and Fast-Response Lysosome-Targetable Fluorescent Probe for Monitoring pH and Isoxaflutole. Int J Mol Sci 2022; 23:ijms23116256. [PMID: 35682934 PMCID: PMC9181397 DOI: 10.3390/ijms23116256] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Revised: 05/13/2022] [Accepted: 05/30/2022] [Indexed: 12/10/2022] Open
Abstract
A new chemosensor, namely N-(2-morpholinoethyl)acetamide-4-morpholine-1,8-naphthimide (MMN), was designed and synthesized through an amidation reaction. MMN was fabricated as a multifunctional fluorescent probe for monitoring pH and isoxaflutole. MMN exhibited excellent stability in MeCN/H2O (v/v, 9/1), with an obvious "off-on" fluorescence response toward pH changes due to intramolecular charge transfer (ICT), where the linear response ranges of MMN in the weakly acidic system were from 4.2 to 5.0 and from 5.0 to 6.0 with apparent pKa = 4.62 ± 0.02 and 5.43 ± 0.02. Based on morpholine as the lysosome targetable unit, MMN could selectively locate lysosomes in live cells. MMN also successfully detected the presence of H+ in test papers. Finally, MMN could specifically recognize isoxaflutole at a detection limit of 0.88 μM. A possible sensing mechanism was identified based on density function theory calculations. These results indicate that MMN could be a superior potential chemosensor for detecting pH and isoxaflutole selectively and sensitively and could be used in real sample detection.
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Affiliation(s)
| | | | | | | | | | - Fei Ye
- Correspondence: (F.Y.); (Y.F.)
| | - Ying Fu
- Correspondence: (F.Y.); (Y.F.)
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9
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Pastore A, Badocco D, Pastore P. Determination of the relevant equilibrium constants working in pH Colorimetric Sensor Arrays (CSAs). Microchem J 2022. [DOI: 10.1016/j.microc.2022.107288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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10
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Luka GS, Najjaran H, Hoorfar M. On-chip-based electrochemical biosensor for the sensitive and label-free detection of Cryptosporidium. Sci Rep 2022; 12:6957. [PMID: 35484282 PMCID: PMC9051104 DOI: 10.1038/s41598-022-10765-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2021] [Accepted: 03/08/2022] [Indexed: 01/14/2023] Open
Abstract
Cryptosporidium, an intestinal protozoan pathogen, is one of the leading causes of death in children and diarrhea in healthy adults. Detection of Cryptosporidium has become a high priority to prevent potential outbreaks. In this paper, a simple, easy to fabricate, and cost-effective on-chip-based electrochemical biosensor has been developed for the sensitive and label-free detection of Cryptosporidium oocysts in water samples. The sensor was fabricated using standard lithography using a mask with a 3-electrode design and modified by self-assembling a hybrid of a thiolated protein/G and the specific anti-Cryptosporidium monoclonal antibodies (IgG3). The electrochemical impedance spectroscopy (EIS) was employed to quantitate C. parvum in the range of 0 to 300 oocysts, with a detection limit of approximately 20 oocysts/5 µL. The high sensitivity and specificity of the developed label-free electrochemical biosensor suggest that this novel platform is a significant step towards the development of fast, real-time, inexpensive and label-free sensing tool for early warning and immediate on-site detection of C. parvum oocysts in water samples, as compared to the traditional methods (such as PCR and microscopy). Furthermore, under optimized conditions, this label-free biosensor can be extended to detect other analytes and biomarkers for environmental and biomedical analyses.
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Affiliation(s)
- George S Luka
- School of Engineering, University of British Columbia, 333 University Way, Kelowna, BC, V1V1V7, Canada
| | - Homayoun Najjaran
- School of Engineering, University of British Columbia, 333 University Way, Kelowna, BC, V1V1V7, Canada
| | - Mina Hoorfar
- School of Engineering, University of British Columbia, 333 University Way, Kelowna, BC, V1V1V7, Canada.
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11
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Russell SM, Alba-Patiño A, Vaquer A, Clemente A, de la Rica R. Improving the Quantification of Colorimetric Signals in Paper-Based Immunosensors with an Open-Source Reader. SENSORS 2022; 22:s22051880. [PMID: 35271026 PMCID: PMC8914853 DOI: 10.3390/s22051880] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 02/22/2022] [Accepted: 02/23/2022] [Indexed: 02/01/2023]
Abstract
Measuring the colorimetric signals produced by the biospecific accumulation of colorimetric probes and recording the results is a key feature for next-generation paper-based rapid tests. Manual processing of these tests is time-consuming and prone to a loss of accuracy when interpreting faint and patchy signals. Proprietary, closed-source readers and software companies offering automated smartphone-based assay readings have both been criticized for interoperability issues. Here, we introduce a minimal reader prototype composed of open-source hardware and open-source software that has the benefits of automatic assay quantification while avoiding the interoperability issues associated with closed-source readers. An image-processing algorithm was developed to automate the selection of an optimal region of interest and measure the average pixel intensity. When used to quantify signals produced by lateral flow immunoassays for detecting antibodies against SARS-CoV-2, results obtained with the proposed algorithm were comparable to those obtained with a manual method but with the advantage of improving the precision and accuracy when quantifying small spots or faint and patchy signals.
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Affiliation(s)
- Steven M. Russell
- Multidisciplinary Sepsis Group, Health Research Institute of the Balearic Islands (IdISBa), 07120 Palma de Mallorca, Spain; (A.A.-P.); (A.V.); (R.d.l.R.)
- Correspondence: (S.M.R.); (A.C.)
| | - Alejandra Alba-Patiño
- Multidisciplinary Sepsis Group, Health Research Institute of the Balearic Islands (IdISBa), 07120 Palma de Mallorca, Spain; (A.A.-P.); (A.V.); (R.d.l.R.)
- Chemistry Department, University of the Balearic Islands, 07122 Palma de Mallorca, Spain
| | - Andreu Vaquer
- Multidisciplinary Sepsis Group, Health Research Institute of the Balearic Islands (IdISBa), 07120 Palma de Mallorca, Spain; (A.A.-P.); (A.V.); (R.d.l.R.)
- Chemistry Department, University of the Balearic Islands, 07122 Palma de Mallorca, Spain
| | - Antonio Clemente
- Multidisciplinary Sepsis Group, Health Research Institute of the Balearic Islands (IdISBa), 07120 Palma de Mallorca, Spain; (A.A.-P.); (A.V.); (R.d.l.R.)
- Correspondence: (S.M.R.); (A.C.)
| | - Roberto de la Rica
- Multidisciplinary Sepsis Group, Health Research Institute of the Balearic Islands (IdISBa), 07120 Palma de Mallorca, Spain; (A.A.-P.); (A.V.); (R.d.l.R.)
- CIBER de Enfermedades Infecciosas (CIBERINFEC), 28029 Madrid, Spain
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12
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Monolithic Integrated OLED–OPD Unit for Point-of-Need Nitrite Sensing. SENSORS 2022; 22:s22030910. [PMID: 35161655 PMCID: PMC8838366 DOI: 10.3390/s22030910] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 01/14/2022] [Accepted: 01/21/2022] [Indexed: 02/06/2023]
Abstract
In this study, we present a highly integrated design of organic optoelectronic devices for Point-of-Need (PON) nitrite (NO2−) measurement. The spectrophotometric investigation of nitrite concentration was performed utilizing the popular Griess reagent and a reflection-based photometric unit with an organic light emitting diode (OLED) and an organic photodetector (OPD). In this approach a nitrite concentration dependent amount of azo dye is formed, which absorbs light around ~540 nm. The organic devices are designed for sensitive detection of absorption changes caused by the presence of this azo dye without the need of a spectrometer. Using a green emitting TCTA:Ir(mppy)3 OLED (peaking at ~512 nm) and a DMQA:DCV3T OPD with a maximum sensitivity around 530 nm, we successfully demonstrated the operation of the OLED–OPD pair for nitrite sensing with a low limit of detection 46 µg/L (1.0 µM) and a linearity of 99%. The hybrid integration of an OLED and an OPD with 0.5 mm × 0.5 mm device sizes and a gap of 0.9 mm is a first step towards a highly compact, low cost and highly commercially viable PON analytic platform. To our knowledge, this is the first demonstration of a fully organic-semiconductor-based monolithic integrated platform for real-time PON photometric nitrite analysis.
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13
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Abdolhosseini M, Zandsalimi F, Moghaddam FS, Tavoosidana G. A review on colorimetric assays for DNA virus detection. J Virol Methods 2022; 301:114461. [PMID: 35031384 DOI: 10.1016/j.jviromet.2022.114461] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2021] [Revised: 01/05/2022] [Accepted: 01/08/2022] [Indexed: 12/22/2022]
Abstract
Early detection is one of the ways to deal with DNA virus widespread prevalence, and it is necessary to know new diagnostic methods and techniques. Colorimetric assays are one of the most advantageous methods in detecting viruses. These methods are based on color change, which can be seen either with the naked eye or with special devices. The aim of this study is to introduce and evaluate effective colorimetric methods based on amplification, nanoparticle, CRISPR/Cas, and Lateral flow in the diagnosis of DNA viruses and to discuss the effectiveness of each of the updated methods. Compared to the other methods, colorimetric assays are preferred for faster detection, high efficiency, cheaper cost, and high sensitivity and specificity. It is expected that the spread of these viruses can be prevented by identifying and developing new methods.
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Affiliation(s)
- Mansoreh Abdolhosseini
- Molecular Medicine Department, School of Advanced Medical Technologies, Tehran University of Medical Sciences, Tehran, Iran; Students' Scientific Research Center (SSRC), Tehran University of Medical Sciences, Tehran, Iran
| | - Farshid Zandsalimi
- Molecular Medicine Department, School of Advanced Medical Technologies, Tehran University of Medical Sciences, Tehran, Iran
| | - Fahimeh Salasar Moghaddam
- Molecular Medicine Department, School of Advanced Medical Technologies, Tehran University of Medical Sciences, Tehran, Iran; Students' Scientific Research Center (SSRC), Tehran University of Medical Sciences, Tehran, Iran
| | - Gholamreza Tavoosidana
- Molecular Medicine Department, School of Advanced Medical Technologies, Tehran University of Medical Sciences, Tehran, Iran.
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14
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Luka G, Samiei E, Tasnim N, Dalili A, Najjaran H, Hoorfar M. Comprehensive review of conventional and state-of-the-art detection methods of Cryptosporidium. JOURNAL OF HAZARDOUS MATERIALS 2022; 421:126714. [PMID: 34325293 DOI: 10.1016/j.jhazmat.2021.126714] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Revised: 07/06/2021] [Accepted: 07/19/2021] [Indexed: 06/13/2023]
Abstract
Cryptosporidium is a critical waterborne protozoan pathogen found in water resources that have been a major cause of death and serious illnesses worldwide, costing millions of dollars annually for its detection and treatment. Over the past several decades, substantial efforts have been made towards developing techniques for the detection of Cryptosporidium. Early diagnostic techniques were established based on the existing tools in laboratories, such as microscopes. Advancements in fluorescence microscopy, immunological, and molecular techniques have led to the development of several kits for the detection of Cryptosporidium spp. However, these methods have several limitations, such as long processing times, large sample volumes, the requirement for bulky and expensive laboratory tools, and the high cost of reagents. There is an urgent need to improve these existing techniques and develop low-cost, portable and rapid detection tools for applications in the water quality industry. In this review, we compare recent advances in nanotechnology, biosensing and microfluidics that have facilitated the development of sophisticated tools for the detection of Cryptosporidium spp.Finally, we highlight the advantages and disadvantages, of these state-of-the-art detection methods compared to current analytical methodologies and discuss the need for future developments to improve such methods for detecting Cryptosporidium in the water supply chain to enable real-time and on-site monitoring in water resources and remote areas.
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Affiliation(s)
- George Luka
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V1V7, Canada.
| | - Ehsan Samiei
- Department of Mechanical & Industrial Engineering, University of Toronto, Toronto, ON M5S 3G8, Canada.
| | - Nishat Tasnim
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V1V7, Canada.
| | - Arash Dalili
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V1V7, Canada.
| | - Homayoun Najjaran
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V1V7, Canada.
| | - Mina Hoorfar
- School of Engineering, University of British Columbia, 3333 University Way, Kelowna, BC V1V1V7, Canada.
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15
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Luka GS, Nowak E, Toyata QR, Tasnim N, Najjaran H, Hoorfar M. Portable on-chip colorimetric biosensing platform integrated with a smartphone for label/PCR-free detection of Cryptosporidium RNA. Sci Rep 2021; 11:23192. [PMID: 34853388 PMCID: PMC8636559 DOI: 10.1038/s41598-021-02580-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 11/16/2021] [Indexed: 11/13/2022] Open
Abstract
Cryptosporidium, a protozoan pathogen, is a leading threat to public health and the economy. Herein, we report the development of a portable, colorimetric biosensing platform for the sensitive, selective and label/PCR-free detection of Cryptosporidium RNA using oligonucleotides modified gold nanoparticles (AuNPs). A pair of specific thiolated oligonucleotides, complementary to adjacent sequences on Cryptosporidium RNA, were attached to AuNPs. The need for expensive laboratory-based equipment was eliminated by performing the colorimetric assay on a micro-fabricated chip in a 3D-printed holder assembly. A smartphone camera was used to capture an image of the color change for quantitative analysis. The detection was based on the aggregation of the gold nanoparticles due to the hybridization between the complementary Cryptosporidium RNA and the oligonucleotides immobilized on the AuNPs surface. In the complementary RNA's presence, a distinctive color change of the AuNPs (from red to blue) was observed by the naked eye. However, in the presence of non-complementary RNA, no color change was observed. The sensing platform showed wide linear responses between 5 and 100 µM with a low detection limit of 5 µM of Cryptosporidium RNA. Additionally, the sensor developed here can provide information about different Cryptosporidium species present in water resources. This cost-effective, easy-to-use, portable and smartphone integrated on-chip colorimetric biosensor has great potential to be used for real-time and portable POC pathogen monitoring and molecular diagnostics.
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Affiliation(s)
- George S Luka
- School of Engineering, Faculty of Applied Science, The University of British Columbia, Kelowna, BC, V1V 1V7, Canada
| | - Ephraim Nowak
- School of Engineering, Faculty of Applied Science, The University of British Columbia, Kelowna, BC, V1V 1V7, Canada
| | - Quin Robert Toyata
- School of Engineering, Faculty of Applied Science, The University of British Columbia, Kelowna, BC, V1V 1V7, Canada
| | - Nishat Tasnim
- School of Engineering, Faculty of Applied Science, The University of British Columbia, Kelowna, BC, V1V 1V7, Canada
| | - Homayoun Najjaran
- School of Engineering, Faculty of Applied Science, The University of British Columbia, Kelowna, BC, V1V 1V7, Canada
| | - Mina Hoorfar
- School of Engineering, Faculty of Applied Science, The University of British Columbia, Kelowna, BC, V1V 1V7, Canada.
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16
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Ma Q, Zhuo W, Zhai Z, Gong G, Zhang T, Xiao H, Zhou Z, Liu Y. A new fluorescent probe for neutral to alkaline pH and imaging application in live cells. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 261:120031. [PMID: 34119767 DOI: 10.1016/j.saa.2021.120031] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Revised: 05/15/2021] [Accepted: 05/25/2021] [Indexed: 06/12/2023]
Abstract
A new pH-sensitive fluorescent probe NAP-MDA was designed and synthesized. NAP-MDA consists of 1,8-naphthalimide as fluorophore, morpholine and N,N-dimethylethylenediamine as pH-responsive groups. Due to the photoinduced electron transfer (PET) mechanism, the fluorescence of 1, 8-naphthalimide was thoroughly quenched under alkaline condition (pH > 10.0), however, NAP-MDA displayed increasing fluorescence as the rise of acidity. Notably, NAP-MDA possessed an excellent linear dependence with neutral to alkaline pH (7.2-9.4), with a pKa of 8.38. NAP-MDA had good photostability and reversibility. Meanwhile, the probe was selective to pH without interference from common reactive species, temperature and viscosity. Fluorescent testing strips were fabricated with NAP-MDA and were successfully utilized to visualize the different pH with a handhold UV lamp. Confocal fluorescence imaging in live cells demonstrated that NAP-MDA mainly fluoresced in lysosomes, and could be applied for quantification of the pH within live cells.
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Affiliation(s)
- Qingqing Ma
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China
| | - Wenfeng Zhuo
- Jiangsu Xinhe Agricultural and Chemical Company Limited, Xinyi 221400, PR China
| | - Zhaodong Zhai
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China
| | - Guangshuai Gong
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China
| | - Tian Zhang
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China
| | - Haibin Xiao
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China.
| | - Ziyan Zhou
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China
| | - Yuying Liu
- School of Chemistry and Chemical Engineering, Shandong University of Technology, Zibo 255049, PR China.
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17
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Moradpour Z, Helmi Kohnehshahri M, Vahabi Shekarloo M, Jalili V, Zendehdel R. Peroxidase-like reaction by a synergistic inorganic catalyst colloid: a new method for hydrogen peroxide detecting in air samples. Colloid Polym Sci 2021. [DOI: 10.1007/s00396-021-04887-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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18
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Pirbhai M, Albrecht C, Tirrell C. A multispectral-sensor-based colorimetric reader for biological assays. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2021; 92:064103. [PMID: 34243509 DOI: 10.1063/5.0040602] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Accepted: 05/27/2021] [Indexed: 06/13/2023]
Abstract
Tests that depend on changes in color are commonly used in biosensing. Here, we report on a colorimetric reader for such applications. The device is simple to construct and operate, making it ideal for research laboratories with limited resources or skilled personnel. It consists of a commercial multispectral sensor interfaced with a Raspberry Pi and a touchscreen. Unlike camera-based readers, this instrument requires no calibration of wavelengths by the user or extensive image processing to obtain results. We demonstrate its potential for colorimetric biosensing by applying it to the birefringent enzyme-linked immunosorbent assay. It was able to prevent certain false positives that the assay is susceptible to and lowered its limit of detection for glucose by an order of magnitude.
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Affiliation(s)
- M Pirbhai
- Department of Physics, St. Lawrence University, 23 Romoda Dr., Canton, New York 13617, USA
| | - C Albrecht
- Department of Physics, University of Oregon, 1585 E 13th Ave., Eugene, Oregon 97403, USA
| | - C Tirrell
- Department of Physics, St. Lawrence University, 23 Romoda Dr., Canton, New York 13617, USA
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19
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Alawsi T, Mattia GP, Al-Bawi Z, Beraldi R. Smartphone-based colorimetric sensor application for measuring biochemical material concentration. SENSING AND BIO-SENSING RESEARCH 2021. [DOI: 10.1016/j.sbsr.2021.100404] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
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20
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Bamane SD, Bhojwani V, Balkunde PL, Bhattacharya M, Gupta I, Mohapatra AK, Shekhar A, Singh A. Smartphone-enabled field monitoring tool for rapid hexavalent chromium detection in water. Anal Bioanal Chem 2021; 413:3455-3469. [PMID: 33796931 DOI: 10.1007/s00216-021-03291-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 03/02/2021] [Accepted: 03/12/2021] [Indexed: 10/21/2022]
Abstract
Chromium contamination of soil and water is a serious environmental and public health concern as the hexavalent form of chromium [Cr(VI)] is readily soluble in water and is a confirmed carcinogen. There is an imminent need for a robust, low-cost, and simple analytical technique to facilitate in situ monitoring of Cr(VI) in water. Current quantitative methods of Cr(VI) detection are largely laboratory-based, time-consuming, expensive, and require training for implementation. In this contribution, a portable, easy-to-use, and compact measuring tool is presented that provides Cr(VI) concentration within 10 min of water sampling over a linear range of 0-3 mg L-1. This tool utilizes a relatively inexpensive camera-enabled smartphone with a custom-made test chamber attachment to seamlessly perform Cr(VI) measurements on water samples in the field. For analysis, an android-based software application was developed that directs the user to perform a simple series of steps following the diphenylcarbazide-based colorimetric method prescribed by the American Public Health Association. The tool was validated against a standard UV-visible spectrophotometer for a variety of synthetic and naturally contaminated water samples, with correlation factors greater than 0.993 (p < .001). The colorimetric method was also validated against a non-colorimetric Cr(VI) detection technique-ion chromatography-inductively coupled plasma mass spectrometry. Furthermore, Cr(VI) detection limits for the smartphone-enabled colorimetric method were found to be within 1.3-11.6 μg L-1, which were significantly better than reported for commercially available field test kits, and even surpassed the limits exhibited by a typical spectrophotometer (25-50 μg L-1). Finally, real-time mapping of source waters at a contaminated site was demonstrated by remote logging of Cr(VI) water quality data and corresponding GPS coordinates into a cloud server. This study highlights the potential role of smartphone-based monitoring tool in providing information to the affected community and enabling safe access to drinking water. An accurate, robust, simple-to-use, and economic method to measure hexavalent chromium in water within 10 min of sampling at site.
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Affiliation(s)
- Sushant D Bamane
- Foundation for Environmental Monitoring, Bangalore, Karnataka, 560001, India
| | - Vinod Bhojwani
- Department of Civil Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.,Environmental Geochemistry Laboratory, Centre for Environmental Science and Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.,Inductis (India) Private Limited, Gurugram, Haryana, 122002, India
| | - Pradeep L Balkunde
- Foundation for Environmental Monitoring, Bangalore, Karnataka, 560001, India
| | - Mainak Bhattacharya
- Department of Civil Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.,Environmental Geochemistry Laboratory, Centre for Environmental Science and Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India
| | - Ishan Gupta
- Foundation for Environmental Monitoring, Bangalore, Karnataka, 560001, India
| | - Ashwini K Mohapatra
- Department of Civil Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.,Environmental Geochemistry Laboratory, Centre for Environmental Science and Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India
| | - Aditya Shekhar
- Department of Civil Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.,Environmental Geochemistry Laboratory, Centre for Environmental Science and Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.,Civil Engineering Department, Motilal Nehru National Institute of Technology Allahabad, Prayagraj, Uttar Pradesh, 211004, India
| | - Abhas Singh
- Department of Civil Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India. .,Environmental Geochemistry Laboratory, Centre for Environmental Science and Engineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, 208016, India.
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21
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Lu YS, Vijayakumar S, Chaix A, Pimentel BR, Bentz KC, Li S, Chan A, Wahl C, Ha JS, Hunka DE, Boss GR, Cohen SM, Sailor MJ. Remote Detection of HCN, HF, and Nerve Agent Vapors Based on Self-Referencing, Dye-Impregnated Porous Silicon Photonic Crystals. ACS Sens 2021; 6:418-428. [PMID: 33263399 DOI: 10.1021/acssensors.0c01931] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
A one-dimensional photonic crystal is prepared from porous silicon (pSi) and impregnated with a chemically specific colorimetric indicator dye to provide a self-referenced vapor sensor for the selective detection of hydrogen fluoride (HF), hydrogen cyanide (HCN), and the chemical nerve agent diisopropyl fluorophosphate (DFP). The photonic crystal is prepared with two stop bands: one that coincides with the optical absorbance of the relevant activated indicator dye and the other in a spectrally "clear" region, to provide a reference. The inner pore walls of the pSi sample are then modified with octadecylsilane to provide a hydrophobic interior, and the indicator dye of interest is then loaded into the mesoporous matrix. Remote analyte detection is achieved by measurement of the intensity ratio of the two stop bands in the white light reflectance spectrum, which provides a means to reliably detect colorimetric changes in the indicator dye. Indicator dyes were chosen for their specificity for the relevant agents: rhodamine-imidazole (RDI) for HF and DFP, and monocyanocobinamide (MCbi) for HCN. The ratiometric readout allows detection of HF and HCN at concentrations (14 and 5 ppm, respectively) that are below their respective IDLH (immediately dangerous to life and health) concentrations (30 ppm for HF; 50 ppm for HCN); detection of DFP at a concentration of 114 ppb is also demonstrated. The approach is insensitive to potential interferents such as ammonia, hydrogen chloride, octane, and the 43-component mixture of VOCs known as EPA TO-14A, and to variations in relative humidity (20-80% RH). Detection of HF and HCN spiked into the complex mixture EPA TO-14A is demonstrated. The approach provides a general means to construct robust remote detection systems for chemical agents.
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Affiliation(s)
- Yi-Sheng Lu
- Materials Science and Engineering Program, University of California, San Diego, La Jolla, California 92093, United States
| | - Sanahan Vijayakumar
- Materials Science and Engineering Program, University of California, San Diego, La Jolla, California 92093, United States
| | - Arnaud Chaix
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Brian R. Pimentel
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Kyle C. Bentz
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Sheng Li
- Department of Medicine, University of California, San Diego, La Jolla, California 92093, United States
| | - Adriano Chan
- Department of Medicine, University of California, San Diego, La Jolla, California 92093, United States
| | - Charlotte Wahl
- Leidos, 10260 Campus Point Drive, San Diego, California 92121, United States
| | - James S. Ha
- Leidos, 10260 Campus Point Drive, San Diego, California 92121, United States
| | - Deborah E. Hunka
- Leidos, 10260 Campus Point Drive, San Diego, California 92121, United States
| | - Gerry R. Boss
- Department of Medicine, University of California, San Diego, La Jolla, California 92093, United States
| | - Seth M. Cohen
- Materials Science and Engineering Program, University of California, San Diego, La Jolla, California 92093, United States
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Michael J. Sailor
- Materials Science and Engineering Program, University of California, San Diego, La Jolla, California 92093, United States
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
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22
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Yoo Y, Yoo WS. Turning Image Sensors into Position and Time Sensitive Quantitative Colorimetric Data Sources with the Aid of Novel Image Processing/Analysis Software. SENSORS (BASEL, SWITZERLAND) 2020; 20:E6418. [PMID: 33182678 PMCID: PMC7696555 DOI: 10.3390/s20226418] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 11/01/2020] [Accepted: 11/09/2020] [Indexed: 11/16/2022]
Abstract
Still images and video images acquired from image sensors are very valuable sources of information. From still images, position-sensitive, quantitative intensity, or colorimetric information can be obtained. Video images made of a time series of still images can provide time-dependent, quantitative intensity, or colorimetric information in addition to the position-sensitive information from a single still image. With the aid of novel image processing/analysis software, extraction of position- and time-sensitive quantitative colorimetric information was demonstrated from still image and video images of litmus test strips for pH tests of solutions. Visual inspection of the color change in the litmus test strips after chemical reaction with chemical solutions is typically exercised. Visual comparison of the color of the test solution with a standard color chart provides an approximate pH value to the nearest whole number. Accurate colorimetric quantification and dynamic analysis of chemical properties from captured still images and recorded video images of test solutions using novel image processing/analysis software are proposed with experimental feasibility study results towards value-added image sensor applications. Position- and time-sensitive quantitative colorimetric measurements and analysis examples are demonstrated.
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Affiliation(s)
- Yeongsik Yoo
- College of Liberal Arts, Dankook University, Yongin-si 16890, Gyeonggi-do, Korea;
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23
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Yoo WS, Han HS, Kim JG, Kang K, Jeon HS, Moon JY, Park H. Development of a tablet PC-based portable device for colorimetric determination of assays including COVID-19 and other pathogenic microorganisms. RSC Adv 2020; 10:32946-32952. [PMID: 35516518 PMCID: PMC9056597 DOI: 10.1039/d0ra05866a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2020] [Accepted: 08/31/2020] [Indexed: 11/21/2022] Open
Abstract
There has been a strong and urgent demand to diagnose community transmission-driven coronavirus disease 2019 (COVID-19) after it crossed borders. A large number of rapid and accurate tests and diagnoses are required at drive-through test stations, community clinics and hospitals. Isothermal amplification technology, such as loop-mediated isothermal amplification (LAMP) and recombinase polymerase amplification (RPA), provides excellent alternatives for resource limited test environments. LAMP has been shown to be comparable with polymerase chain reaction (PCR) and can be performed in less than 30 min by non-laboratory staff without ribonucleic acid (RNA) extractions commonly associated with PCR. LAMP tests on assays with SARS-CoV-2 and other pathogenic microorganisms, such as Dengue, Malaria, and Influenza viruses and Helicobacter pylori show color changes allowing test results to be interpreted by the color change of the assays. However, visual inspection of a large number of assays is prone to human error and manual record keeping makes test result tracking for an epidemiologic investigation very difficult and inefficient. The epidemiologic investigation is an essential part of the fight against community transmission-driven viruses. We have developed a very accurate and reliable, human error free, tablet PC-based portable device for colorimetric determination of assays including SARS-CoV-2 and other pathogenic microorganisms.
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Affiliation(s)
| | - Hyung Soo Han
- Department of Physiology, Clinical Omics Institute, School of Medicine, Kyungpook National University Daegu Republic of Korea
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24
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Abstract
With the rapid development of high technology, chemical science is not as it used to be a century ago. Many chemists acquire and utilize skills that are well beyond the traditional definition of chemistry. The digital age has transformed chemistry laboratories. One aspect of this transformation is the progressing implementation of electronics and computer science in chemistry research. In the past decade, numerous chemistry-oriented studies have benefited from the implementation of electronic modules, including microcontroller boards (MCBs), single-board computers (SBCs), professional grade control and data acquisition systems, as well as field-programmable gate arrays (FPGAs). In particular, MCBs and SBCs provide good value for money. The application areas for electronic modules in chemistry research include construction of simple detection systems based on spectrophotometry and spectrofluorometry principles, customizing laboratory devices for automation of common laboratory practices, control of reaction systems (batch- and flow-based), extraction systems, chromatographic and electrophoretic systems, microfluidic systems (classical and nonclassical), custom-built polymerase chain reaction devices, gas-phase analyte detection systems, chemical robots and drones, construction of FPGA-based imaging systems, and the Internet-of-Chemical-Things. The technology is easy to handle, and many chemists have managed to train themselves in its implementation. The only major obstacle in its implementation is probably one's imagination.
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Affiliation(s)
- Gurpur Rakesh D Prabhu
- Department of Chemistry, National Tsing Hua University, 101, Section 2, Kuang-Fu Road, Hsinchu, 30013, Taiwan.,Department of Applied Chemistry, National Chiao Tung University, 1001 University Road, Hsinchu, 300, Taiwan
| | - Pawel L Urban
- Department of Chemistry, National Tsing Hua University, 101, Section 2, Kuang-Fu Road, Hsinchu, 30013, Taiwan.,Frontier Research Center on Fundamental and Applied Sciences of Matters, National Tsing Hua University, 101, Section 2, Kuang-Fu Road, Hsinchu, 30013, Taiwan
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25
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Low-cost Point-of-Care Biosensors Using Common Electronic Components as Transducers. BIOCHIP JOURNAL 2020. [DOI: 10.1007/s13206-020-4104-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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26
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Dutta R, Thangapandi K, Mondal S, Nanda A, Bose S, Sanyal S, Jana SK, Ghorai S. Polyaniline Based Electrochemical Sensor for the Detection of Dengue Virus Infection. Avicenna J Med Biotechnol 2020; 12:77-84. [PMID: 32431791 PMCID: PMC7229450] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
BACKGROUND Dengue burden is increasing day-by-day globally. A rapid, sensitive, cost-effective early diagnosis kit is the need of the hour. In this study, a label-free electrochemical immunosensor was proposed for dengue virus detection. A modified Polyaniline (PANI) coated Glassy Carbon (GC) electrode, immobilized with DENV NS1 antibody was used to detect the circulating DENV NS1 antigen in both spiked and infected sample. METHODS Cloning, purification and expression of DENV NS1 protein in Escherichia coli (E. coli) was performed and sensor design, PANI modification on GC electrode surface by electrochemical polymerization and immobilization of NS1 antibody on the modified electrode surface was done and finally the analytical performance of the electrochemical immunosensor was done using Cyclic Voltammetry (CV) and Electrochemical Impedance Spectroscopy (EIS). RESULTS CV and EIS were used to study and quantitate the circulating DENV antigen. The calibration curve showed wide linearity, good sensitivity (Slope=13.8% IpR/ml.ng -1) and distribution of data with a correlation coefficient (R) of 0.997. A lower Limit of Detection (LOD) was found to be 0.33 ng.ml -1 which encourages the applicability of the sensor. CONCLUSION Thus, a PANI based new electrochemical immunosensor has been developed which has the potential to be further modified for the development of cost effective, point of care dengue diagnostic kit.
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Affiliation(s)
- Reshmi Dutta
- Department of Biotechnology, Faculty of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India
| | - K Thangapandi
- Department of Biotechnology, National Institute of Technology, Yupia, Papum Pare, Arunachal Pradesh, India
| | - Sumantra Mondal
- Department of Biotechnology, Faculty of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India
| | - Amalesh Nanda
- Department of Biotechnology, National Institute of Technology, Yupia, Papum Pare, Arunachal Pradesh, India
| | - Shreyosi Bose
- Department of Biotechnology, Faculty of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India
| | - Shairee Sanyal
- Department of Biotechnology, Faculty of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India
| | - Saikat Kumar Jana
- Department of Biotechnology, National Institute of Technology, Yupia, Papum Pare, Arunachal Pradesh, India,Saikat Kumar Jana, Ph.D., Department of Biotechnology, National Institute of Technology, Yupia, Papum Pare, Arunachal Pradesh-791112, India, Tel: +91 9028596143, E-mail:
| | - Suvankar Ghorai
- Department of Biotechnology, Faculty of Bioengineering, SRM Institute of Science and Technology, Kattankulathur, Tamil Nadu, India,Corresponding authors: Suvankar Ghorai, Ph.D., Department of Biotechnology, School of Bioengineering, SRM Institute of Science and Technology, Kattankulathur-603203, Tamil Nadu, India
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27
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Sailapu SK, Dutta D, Simon AT, Ghosh SS, Chattopadhyay A. Smartphone controlled interactive portable device for theranostics in vitro. Biosens Bioelectron 2019; 146:111745. [PMID: 31606688 DOI: 10.1016/j.bios.2019.111745] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 09/11/2019] [Accepted: 09/28/2019] [Indexed: 10/25/2022]
Abstract
In this work, a smartphone controlled interactive theranostic device has been developed to perform in vitro photodynamic therapy (PDT) and diagnostic assays for treatment assessment on a single platform. Further, silver nanorod (Ag NR) was identified as a photosensitizer and its effect was studied in three different cell lines. PDT was achieved with Ag NRs using low irradiation (1.4 mW/cm2 at 632 nm) from light emitting diodes (LEDs) in the device. Specifically, PDT in conjugation with widely used chemotherapeutic drug doxorubicin (Dox) proved effective in killing of HeLa cancer cells and multicellular tumor spheroids at a minimum dose of Ag (2.5 μg/mL). The MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) and LDH (lactate dehydrogenase) assays performed with the device indicated the therapeutic success of the delivered PDT. The device is portable and can be adapted for different wavelength irradiations and radiation doses. Additionally, wireless operation using a custom designed smartphone application makes it convenient to use in complex environments without much of human intervention.
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Affiliation(s)
- Sunil Kumar Sailapu
- Centre for Nanotechnology, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India.
| | - Deepanjalee Dutta
- Centre for Nanotechnology, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India.
| | - Anitha T Simon
- Centre for Nanotechnology, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India
| | - Siddhartha Sankar Ghosh
- Centre for Nanotechnology, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India; Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India.
| | - Arun Chattopadhyay
- Centre for Nanotechnology, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India; Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781 039, Assam, India.
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Dudala S, Dubey SK, Goel S. Fully Integrated, Automated, and Smartphone Enabled Point-of-Source Portable Platform With Microfluidic Device for Nitrite Detection. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2019; 13:1518-1524. [PMID: 31494558 DOI: 10.1109/tbcas.2019.2939658] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Excess limit of Nitrites, which are prevalent within environmental and physiological systems, have severe detrimental effects, thus point-of-source detection becomes an important requirement to take suitable preventive measures. This paper presents the design and development of a standalone, point-of-source, portable, low-cost, automated and integrated microfluidic system for quick detection and quantification of nitrite. Based on multiphysics simulations, a disposable polydimethylsiloxane (PDMS) microfluidic device was employed to carry out the controlled Griess reaction based assay. A low-cost 3D printed syringe pump was developed to inject the sample and reagent. Photometric detection was employed using light emitting diode (LED) and photodiode. A transimpedance amplifier circuit was designed and fabricated to achieve amplified photodiode output with reduced noise. An off-the-shelf microprocessor was used to integrate the whole system and a smartphone application (app) was developed to control the complete system and store the data. Interaction between the application and the microprocessor was achieved using Bluetooth connectivity. Spectrophotometric validation was performed and a calibration equation was obtained which was used to convert the device voltage output to absorption, through specially programmed android app. All the components were integrated in a 3D printed platform whose virtues such as ease of usage and affordability makes, quantification of nitrite, a simple and real time process wherein the limit of detection and limit of quantification values are found to be 0.07103 ppm and 0.21524 ppm respectively with good repeatability.
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Hobbs RJ, Thomas CA, Halliwell J, Gwenin CD. Rapid Detection of Botulinum Neurotoxins-A Review. Toxins (Basel) 2019; 11:E418. [PMID: 31319550 PMCID: PMC6669533 DOI: 10.3390/toxins11070418] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2019] [Revised: 07/15/2019] [Accepted: 07/15/2019] [Indexed: 12/13/2022] Open
Abstract
A toxin is a poisonous substance produced within living cells or organisms. One of the most potent groups of toxins currently known are the Botulinum Neurotoxins (BoNTs). These are so deadly that as little as 62 ng could kill an average human; to put this into context that is approximately 200,000 × less than the weight of a grain of sand. The extreme toxicity of BoNTs leads to the need for methods of determining their concentration at very low levels of sensitivity. Currently the mouse bioassay is the most widely used detection method monitoring the activity of the toxin; however, this assay is not only lengthy, it also has both cost and ethical issues due to the use of live animals. This review focuses on detection methods both existing and emerging that remove the need for the use of animals and will look at three areas; speed of detection, sensitivity of detection and finally cost. The assays will have wide reaching interest, ranging from the pharmaceutical/clinical industry for production quality management or as a point of care sensor in suspected cases of botulism, the food industry as a quality control measure, to the military, detecting BoNT that has been potentially used as a bio warfare agent.
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Affiliation(s)
- Robert J Hobbs
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK
| | - Carol A Thomas
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK
| | - Jennifer Halliwell
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK
| | - Christopher D Gwenin
- Applied Research in Chemistry and Health (ARCH) Research Group, School of Natural Sciences, Bangor University, Bangor, Gwynedd, Wales LL57 2UW, UK.
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Williamson CA, Kinerk WT. Estimation of coloration and luminous transmittance of eyewear filters using a digital camera and white paper. APPLIED OPTICS 2019; 58:3354-3358. [PMID: 31044831 DOI: 10.1364/ao.58.003354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 03/28/2019] [Indexed: 06/09/2023]
Abstract
Quantifying the coloration and luminous transmittance of eyewear filters is essential to understand their impact on human visual performance. Accurate measurements require the use of a spectrophotometer, with such equipment often being prohibitively expensive for wide-scale use. This paper details a new technique to characterize eyewear filters using only a digital camera and a sheet of white paper. Images of the paper are captured with and without the filter in front of the camera lens, and then subsequent analysis of pixel intensities allows the filter coloration and luminous transmittance to be determined. The technique has been applied to six different eyewear filters using three different camera and illumination configurations, demonstrating a reasonable match to the spectrophotometer data. This technique is suited to implementation in a smartphone app, in order to provide a low-cost and widely deployable solution to monitor the ageing of eyewear inventory.
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Prasad A, Hasan SMA, Grouchy S, Gartia MR. DNA microarray analysis using a smartphone to detect the BRCA-1 gene. Analyst 2019; 144:197-205. [PMID: 30302482 DOI: 10.1039/c8an01020j] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
DNA microarrays are used to examine changes in gene expression of a large number of genes simultaneously by fluorescent labeling of complementary DNAs (cDNAs). The major bottleneck in implementing microarray technology in resource-limited settings lies in the detection instrument used for generating images of spotted oligonucleotides post-hybridization. While various methods such as a lateral flow assay have been presented to accomplish point-of-care disease detection, there is no simple and effective instrument available to gather spot images maintaining the standard microarray procedures. Nanotechnology based sensors connected with a portable smartphone readout system have the potential to be implemented in microarray technology. Here, we describe a portable fluorescence microarray based imaging system connected to a smartphone for detecting breast cancer gene expression (BRCA-1) from exon 11. This is based on the interactive binding of probe DNA to Cy3-target DNA. A paper-based microfluidics approach was used to demonstrate the DNA hybridization assay. The imaging principles of the assembled device named "FluoroZen" are similar to those of a fluorescence microscope. It uses two light spectrum filters, one to excite the fluorescent dye and the other to capture the emission spectrum. The images were acquired by using CCD cameras from FluoroZen. The smartphone integrated paper microfluidics platform presented here could be translated into clinical settings to perform point-of-care testing.
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Affiliation(s)
- Alisha Prasad
- Department of Mechanical and Industrial Engineering, Louisiana State University, Baton Rouge, Louisiana 70803, USA.
| | - Syed Mohammad Abid Hasan
- Department of Mechanical and Industrial Engineering, Louisiana State University, Baton Rouge, Louisiana 70803, USA.
| | - Steven Grouchy
- Department of Mechanical and Industrial Engineering, Louisiana State University, Baton Rouge, Louisiana 70803, USA.
| | - Manas Ranjan Gartia
- Department of Mechanical and Industrial Engineering, Louisiana State University, Baton Rouge, Louisiana 70803, USA.
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Label-Free Capacitive Biosensor for Detection of Cryptosporidium. SENSORS 2019; 19:s19020258. [PMID: 30634686 PMCID: PMC6359478 DOI: 10.3390/s19020258] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Revised: 01/03/2019] [Accepted: 01/04/2019] [Indexed: 12/11/2022]
Abstract
Cryptosporidium, an intestinal protozoan pathogen, is one of the leading causes of diarrhea in healthy adults and death in children. Detection of Cryptosporidium oocysts has become a high priority to prevent potential outbreaks. In this paper, a label-free interdigitated-based capacitive biosensor has been introduced for the detection of Cryptosporidium oocysts in water samples. Specific anti-Cryptosporidium monoclonal antibodies (IgG3) were covalently immobilized onto interdigitated gold electrodes as the capture probes, and bovine serum albumin was used to avoid non-specific adsorption. The immobilization of the antibodies was confirmed by measuring the change in the contact angle. The detection was achieved by measuring the relative change in the capacitive/dielectric properties due to the formation of Cryptosporidium-antibody complex. The biosensor has been tested for different concentrations of Cryptosporidium. The results show that the biosensor developed can accurately distinguish different numbers of captured cells and densities on the surface of the biosensor. The number of Cryptosporidium oocysts captured on the electrode surface was confirmed using a fluorescein isothiocyanate (FITC) immunofluorescence assay. The response from the developed biosensor has been mainly dependent on the concentration of Cryptosporidium under optimized conditions. The biosensor showed a linear detection range between 15 and 153 cells/mm2 and a detection limit of 40 cells/mm2. The label-free capacitive biosensor developed has a great potential for detecting Cryptosporidium in environmental water samples. Furthermore, under optimized conditions, this label-free biosensor can be extended for detection of other biomarkers for biomedical and environmental analyses.
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Li J, Sun Y, Chen C, Sheng T, Liu P, Zhang G. A smartphone-assisted microfluidic chemistry analyzer using image-based colorimetric assays for multi-index monitoring of diabetes and hyperlipidemia. Anal Chim Acta 2018; 1052:105-112. [PMID: 30685028 DOI: 10.1016/j.aca.2018.11.025] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Revised: 11/05/2018] [Accepted: 11/12/2018] [Indexed: 11/30/2022]
Abstract
A smartphone-assisted microfluidic chemistry analyzer using an image-based colorimetric detection method was successfully developed for the simultaneous analysis of three diabetes- and hyperlipidemia-related indexes, glucose (GLU), triglyceride (TG), and total cholesterol (TC). A fan-shaped microfluidic chip was designed and optimized to reliably allocate a premixed serum sample into four reaction chambers by a simple pipetting. The color changes of the peroxidase-H2O2 enzymatic reactions in the chambers were captured and analyzed using a smartphone-controlled analyzer with a LED light source and a CCD camera. The highly quantitative relationships between the analyte concentrations and the color characteristic values of the green channel of the captured images were successfully established, enabling accurate and reproducible detections of GLU, TG, and TC simultaneously at a low cost. The parallel analyses of 111 serum samples using our system and a conventional chemistry analyzer were conducted, yielding an excellent correlation and consistency between these two systems. This study proved the feasibility of performing the multi-index monitoring of diabetes, hyperlipidemia, and other chronic diseases on a point-of-care platform at a high fidelity, but a low cost.
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Affiliation(s)
- Jie Li
- National Engineering Research Center for Beijing Biochip Technology, Beijing, 102206, China
| | - Yujia Sun
- Department of Biomedical Engineering, School of Medicine, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University, Beijing, 100084, China
| | - Cheng Chen
- Department of Biomedical Engineering, School of Medicine, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University, Beijing, 100084, China; National Engineering Research Center for Beijing Biochip Technology, Beijing, 102206, China
| | - Tao Sheng
- National Engineering Research Center for Beijing Biochip Technology, Beijing, 102206, China
| | - Peng Liu
- Department of Biomedical Engineering, School of Medicine, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University, Beijing, 100084, China.
| | - Guanbin Zhang
- Department of Biomedical Engineering, School of Medicine, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Tsinghua University, Beijing, 100084, China; National Engineering Research Center for Beijing Biochip Technology, Beijing, 102206, China.
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