1
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Nandi MK, Valla M, di Volo M. Bursting gamma oscillations in neural mass models. Front Comput Neurosci 2024; 18:1422159. [PMID: 39281982 PMCID: PMC11392745 DOI: 10.3389/fncom.2024.1422159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Accepted: 08/08/2024] [Indexed: 09/18/2024] Open
Abstract
Gamma oscillations (30-120 Hz) in the brain are not periodic cycles, but they typically appear in short-time windows, often called oscillatory bursts. While the origin of this bursting phenomenon is still unclear, some recent studies hypothesize its origin in the external or endogenous noise of neural networks. We demonstrate that an exact neural mass model of excitatory and inhibitory quadratic-integrate and fire-spiking neurons theoretically predicts the emergence of a different regime of intrinsic bursting gamma (IBG) oscillations without any noise source, a phenomenon due to collective chaos. This regime is indeed observed in the direct simulation of spiking neurons, characterized by highly irregular spiking activity. IBG oscillations are distinguished by higher phase-amplitude coupling to slower theta oscillations concerning noise-induced bursting oscillations, thus indicating an increased capacity for information transfer between brain regions. We demonstrate that this phenomenon is present in both globally coupled and sparse networks of spiking neurons. These results propose a new mechanism for gamma oscillatory activity, suggesting deterministic collective chaos as a good candidate for the origin of gamma bursts.
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Affiliation(s)
- Manoj Kumar Nandi
- Université Claude Bernard Lyon 1, Lyon, Rhône-Alpes, France
- INSERM U1208 Institut Cellule Souche et Cerveau, Bron, France
| | - Michele Valla
- Université Claude Bernard Lyon 1, Lyon, Rhône-Alpes, France
- INSERM U1208 Institut Cellule Souche et Cerveau, Bron, France
| | - Matteo di Volo
- Université Claude Bernard Lyon 1, Lyon, Rhône-Alpes, France
- INSERM U1208 Institut Cellule Souche et Cerveau, Bron, France
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2
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Pietras B. Pulse Shape and Voltage-Dependent Synchronization in Spiking Neuron Networks. Neural Comput 2024; 36:1476-1540. [PMID: 39028958 DOI: 10.1162/neco_a_01680] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Accepted: 03/18/2024] [Indexed: 07/21/2024]
Abstract
Pulse-coupled spiking neural networks are a powerful tool to gain mechanistic insights into how neurons self-organize to produce coherent collective behavior. These networks use simple spiking neuron models, such as the θ-neuron or the quadratic integrate-and-fire (QIF) neuron, that replicate the essential features of real neural dynamics. Interactions between neurons are modeled with infinitely narrow pulses, or spikes, rather than the more complex dynamics of real synapses. To make these networks biologically more plausible, it has been proposed that they must also account for the finite width of the pulses, which can have a significant impact on the network dynamics. However, the derivation and interpretation of these pulses are contradictory, and the impact of the pulse shape on the network dynamics is largely unexplored. Here, I take a comprehensive approach to pulse coupling in networks of QIF and θ-neurons. I argue that narrow pulses activate voltage-dependent synaptic conductances and show how to implement them in QIF neurons such that their effect can last through the phase after the spike. Using an exact low-dimensional description for networks of globally coupled spiking neurons, I prove for instantaneous interactions that collective oscillations emerge due to an effective coupling through the mean voltage. I analyze the impact of the pulse shape by means of a family of smooth pulse functions with arbitrary finite width and symmetric or asymmetric shapes. For symmetric pulses, the resulting voltage coupling is not very effective in synchronizing neurons, but pulses that are slightly skewed to the phase after the spike readily generate collective oscillations. The results unveil a voltage-dependent spike synchronization mechanism at the heart of emergent collective behavior, which is facilitated by pulses of finite width and complementary to traditional synaptic transmission in spiking neuron networks.
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Affiliation(s)
- Bastian Pietras
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, 08018, Barcelona, Spain
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3
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Tahvili F, Destexhe A. A mean-field model of gamma-frequency oscillations in networks of excitatory and inhibitory neurons. J Comput Neurosci 2024; 52:165-181. [PMID: 38512693 DOI: 10.1007/s10827-024-00867-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2023] [Revised: 02/22/2024] [Accepted: 02/27/2024] [Indexed: 03/23/2024]
Abstract
Gamma oscillations are widely seen in the cerebral cortex in different states of the wake-sleep cycle and are thought to play a role in sensory processing and cognition. Here, we study the emergence of gamma oscillations at two levels, in networks of spiking neurons, and a mean-field model. At the network level, we consider two different mechanisms to generate gamma oscillations and show that they are best seen if one takes into account the synaptic delay between neurons. At the mean-field level, we show that, by introducing delays, the mean-field can also produce gamma oscillations. The mean-field matches the mean activity of excitatory and inhibitory populations of the spiking network, as well as their oscillation frequencies, for both mechanisms. This mean-field model of gamma oscillations should be a useful tool to investigate large-scale interactions through gamma oscillations in the brain.
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Affiliation(s)
- Farzin Tahvili
- Institute of Neuroscience (NeuroPSI), Paris-Saclay University, CNRS, 91400, Saclay, France
- Stem-cell & Brain Research Institute (SBRI), 69500, Bron Cedex, France
| | - Alain Destexhe
- Institute of Neuroscience (NeuroPSI), Paris-Saclay University, CNRS, 91400, Saclay, France.
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4
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Politi A, Torcini A. A robust balancing mechanism for spiking neural networks. CHAOS (WOODBURY, N.Y.) 2024; 34:041102. [PMID: 38639569 DOI: 10.1063/5.0199298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 02/03/2024] [Indexed: 04/20/2024]
Abstract
Dynamical balance of excitation and inhibition is usually invoked to explain the irregular low firing activity observed in the cortex. We propose a robust nonlinear balancing mechanism for a random network of spiking neurons, which works also in the absence of strong external currents. Biologically, the mechanism exploits the plasticity of excitatory-excitatory synapses induced by short-term depression. Mathematically, the nonlinear response of the synaptic activity is the key ingredient responsible for the emergence of a stable balanced regime. Our claim is supported by a simple self-consistent analysis accompanied by extensive simulations performed for increasing network sizes. The observed regime is essentially fluctuation driven and characterized by highly irregular spiking dynamics of all neurons.
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Affiliation(s)
- Antonio Politi
- Institute for Complex Systems and Mathematical Biology and Department of Physics, Aberdeen AB24 3UE, United Kingdom
- CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy
| | - Alessandro Torcini
- CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy
- Laboratoire de Physique Théorique et Modélisation, CY Cergy Paris Université, CNRS UMR 8089, 95302 Cergy-Pontoise cedex, France
- INFN Sezione di Firenze, Via Sansone 1 50019 Sesto Fiorentino, Italy
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5
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Douchamps V, di Volo M, Torcini A, Battaglia D, Goutagny R. Gamma oscillatory complexity conveys behavioral information in hippocampal networks. Nat Commun 2024; 15:1849. [PMID: 38418832 PMCID: PMC10902292 DOI: 10.1038/s41467-024-46012-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Accepted: 02/09/2024] [Indexed: 03/02/2024] Open
Abstract
The hippocampus and entorhinal cortex exhibit rich oscillatory patterns critical for cognitive functions. In the hippocampal region CA1, specific gamma-frequency oscillations, timed at different phases of the ongoing theta rhythm, are hypothesized to facilitate the integration of information from varied sources and contribute to distinct cognitive processes. Here, we show that gamma elements -a multidimensional characterization of transient gamma oscillatory episodes- occur at any frequency or phase relative to the ongoing theta rhythm across all CA1 layers in male mice. Despite their low power and stochastic-like nature, individual gamma elements still carry behavior-related information and computational modeling suggests that they reflect neuronal firing. Our findings challenge the idea of rigid gamma sub-bands, showing that behavior shapes ensembles of irregular gamma elements that evolve with learning and depend on hippocampal layers. Widespread gamma diversity, beyond randomness, may thus reflect complexity, likely functional but invisible to classic average-based analyses.
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Affiliation(s)
- Vincent Douchamps
- Université de Strasbourg, Laboratoire de Neurosciences Cognitives et Adaptatives (LNCA), CNRS, UMR 7364, Strasbourg, France
| | - Matteo di Volo
- Université Claude Bernard Lyon 1, Institut National de la Santé et de la Recherche Médicale, Stem Cell and Brain Research Institute, U1208, Bron, France
- CY Cergy Paris Université, Laboratoire de Physique Théorique et Modélisation (LPTM), CNRS, UMR 8089, 95302, Cergy-Pontoise, France
| | - Alessandro Torcini
- CY Cergy Paris Université, Laboratoire de Physique Théorique et Modélisation (LPTM), CNRS, UMR 8089, 95302, Cergy-Pontoise, France
- CNR - Consiglio Nazionale delle Ricerche, Istituto dei Sistemi Complessi, via Madonna del Piano 10, 50019, Sesto Fiorentino, Italy
| | - Demian Battaglia
- Université de Strasbourg, Laboratoire de Neurosciences Cognitives et Adaptatives (LNCA), CNRS, UMR 7364, Strasbourg, France.
- Aix-Marseille Université, Institut de Neurosciences des Systèmes (INS), INSERM, UMR 1106, Marseille, France.
- University of Strasbourg Institute for Advanced Studies (USIAS), Strasbourg, France.
| | - Romain Goutagny
- Université de Strasbourg, Laboratoire de Neurosciences Cognitives et Adaptatives (LNCA), CNRS, UMR 7364, Strasbourg, France.
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6
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Goldobin DS, Permyakova EV, Klimenko LS. Macroscopic behavior of populations of quadratic integrate-and-fire neurons subject to non-Gaussian white noise. CHAOS (WOODBURY, N.Y.) 2024; 34:013121. [PMID: 38242105 DOI: 10.1063/5.0172735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Accepted: 12/19/2023] [Indexed: 01/21/2024]
Abstract
We study macroscopic behavior of populations of quadratic integrate-and-fire neurons subject to non-Gaussian noises; we argue that these noises must be α-stable whenever they are delta-correlated (white). For the case of additive-in-voltage noise, we derive the governing equation of the dynamics of the characteristic function of the membrane voltage distribution and construct a linear-in-noise perturbation theory. Specifically for the recurrent network with global synaptic coupling, we theoretically calculate the observables: population-mean membrane voltage and firing rate. The theoretical results are underpinned by the results of numerical simulation for homogeneous and heterogeneous populations. The possibility of the generalization of the pseudocumulant approach to the case of a fractional α is examined for both irrational and fractional rational α. This examination seemingly suggests the pseudocumulant approach or its modifications to be employable only for the integer values of α=1 (Cauchy noise) and 2 (Gaussian noise) within the physically meaningful range (0;2]. Remarkably, the analysis for fractional α indirectly revealed that, for the Gaussian noise, the minimal asymptotically rigorous model reduction must involve three pseudocumulants and the two-pseudocumulant model reduction is an artificial approximation. This explains a surprising gain of accuracy for the three-pseudocumulant models as compared to the two-pseudocumulant ones reported in the literature.
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Affiliation(s)
- Denis S Goldobin
- Institute of Continuous Media Mechanics, UB RAS, Academician Korolev Street 1, 614013 Perm, Russia
- Department of Control Theory, Nizhny Novgorod State University, Gagarin Avenue 23, 603022 Nizhny Novgorod, Russia
| | - Evelina V Permyakova
- Institute of Continuous Media Mechanics, UB RAS, Academician Korolev Street 1, 614013 Perm, Russia
| | - Lyudmila S Klimenko
- Institute of Continuous Media Mechanics, UB RAS, Academician Korolev Street 1, 614013 Perm, Russia
- Department of Theoretical Physics, Perm State University, Bukirev Street 15, 614990 Perm, Russia
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7
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Laing CR, Omel’chenko OE. Periodic solutions in next generation neural field models. BIOLOGICAL CYBERNETICS 2023; 117:259-274. [PMID: 37535104 PMCID: PMC10600056 DOI: 10.1007/s00422-023-00969-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Accepted: 07/12/2023] [Indexed: 08/04/2023]
Abstract
We consider a next generation neural field model which describes the dynamics of a network of theta neurons on a ring. For some parameters the network supports stable time-periodic solutions. Using the fact that the dynamics at each spatial location are described by a complex-valued Riccati equation we derive a self-consistency equation that such periodic solutions must satisfy. We determine the stability of these solutions, and present numerical results to illustrate the usefulness of this technique. The generality of this approach is demonstrated through its application to several other systems involving delays, two-population architecture and networks of Winfree oscillators.
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Affiliation(s)
- Carlo R. Laing
- School of Mathematical and Computational Sciences, Massey University, Private Bag 102-904 NSMC, Auckland, New Zealand
| | - Oleh E. Omel’chenko
- Institute of Physics and Astronomy, University of Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam, Germany
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8
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Clusella P, Köksal-Ersöz E, Garcia-Ojalvo J, Ruffini G. Comparison between an exact and a heuristic neural mass model with second-order synapses. BIOLOGICAL CYBERNETICS 2023; 117:5-19. [PMID: 36454267 PMCID: PMC10160168 DOI: 10.1007/s00422-022-00952-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 10/23/2022] [Indexed: 05/05/2023]
Abstract
Neural mass models (NMMs) are designed to reproduce the collective dynamics of neuronal populations. A common framework for NMMs assumes heuristically that the output firing rate of a neural population can be described by a static nonlinear transfer function (NMM1). However, a recent exact mean-field theory for quadratic integrate-and-fire (QIF) neurons challenges this view by showing that the mean firing rate is not a static function of the neuronal state but follows two coupled nonlinear differential equations (NMM2). Here we analyze and compare these two descriptions in the presence of second-order synaptic dynamics. First, we derive the mathematical equivalence between the two models in the infinitely slow synapse limit, i.e., we show that NMM1 is an approximation of NMM2 in this regime. Next, we evaluate the applicability of this limit in the context of realistic physiological parameter values by analyzing the dynamics of models with inhibitory or excitatory synapses. We show that NMM1 fails to reproduce important dynamical features of the exact model, such as the self-sustained oscillations of an inhibitory interneuron QIF network. Furthermore, in the exact model but not in the limit one, stimulation of a pyramidal cell population induces resonant oscillatory activity whose peak frequency and amplitude increase with the self-coupling gain and the external excitatory input. This may play a role in the enhanced response of densely connected networks to weak uniform inputs, such as the electric fields produced by noninvasive brain stimulation.
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Affiliation(s)
- Pau Clusella
- Department of Medicine and Life Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, 08003, Barcelona, Spain.
| | - Elif Köksal-Ersöz
- LTSI - UMR 1099, INSERM, Univ Rennes, Campus Beaulieu, 35000, Rennes, France
| | - Jordi Garcia-Ojalvo
- Department of Medicine and Life Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, 08003, Barcelona, Spain
| | - Giulio Ruffini
- Brain Modeling Department, Neuroelectrics, Av. Tibidabo, 47b, 08035, Barcelona, Spain.
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9
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Klinshov VV, Kirillov SY. Shot noise in next-generation neural mass models for finite-size networks. Phys Rev E 2022; 106:L062302. [PMID: 36671128 DOI: 10.1103/physreve.106.l062302] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Accepted: 12/12/2022] [Indexed: 06/17/2023]
Abstract
Neural mass models is a general name for various models describing the collective dynamics of large neural populations in terms of averaged macroscopic variables. Recently, the so-called next-generation neural mass models have attracted a lot of attention due to their ability to account for the degree of synchrony. Being exact in the limit of infinitely large number of neurons, these models provide only an approximate description of finite-size networks. In the present Letter we study finite-size effects in the collective behavior of neural networks and prove that these effects can be captured by appropriately modified neural mass models. Namely, we show that the finite size of the network leads to the emergence of the so-called shot noise appearing as a stochastic term in the neural mass model. The power spectrum of this shot noise contains pronounced peaks, therefore its impact on the collective dynamics might be crucial due to resonance effects.
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Affiliation(s)
- Vladimir V Klinshov
- Institute of Applied Physics of the Russian Academy of Sciences, 46 Ul'yanov Street, Nizhny Novgorod 603950, Russia and Faculty of Informatics, Mathematics, and Computer Science, National Research University Higher School of Economics, 25/12 Bol'shaya Pecherskaya Street, Nizhny Novgorod 603155, Russia
| | - Sergey Yu Kirillov
- Institute of Applied Physics of the Russian Academy of Sciences, 46 Ul'yanov Street, Nizhny Novgorod 603950, Russia
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10
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Cross-scale excitability in networks of quadratic integrate-and-fire neurons. PLoS Comput Biol 2022; 18:e1010569. [PMID: 36191049 PMCID: PMC9560555 DOI: 10.1371/journal.pcbi.1010569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 10/13/2022] [Accepted: 09/13/2022] [Indexed: 11/05/2022] Open
Abstract
From the action potentials of neurons and cardiac cells to the amplification of calcium signals in oocytes, excitability is a hallmark of many biological signalling processes. In recent years, excitability in single cells has been related to multiple-timescale dynamics through canards, special solutions which determine the effective thresholds of the all-or-none responses. However, the emergence of excitability in large populations remains an open problem. Here, we show that the mechanism of excitability in large networks and mean-field descriptions of coupled quadratic integrate-and-fire (QIF) cells mirrors that of the individual components. We initially exploit the Ott-Antonsen ansatz to derive low-dimensional dynamics for the coupled network and use it to describe the structure of canards via slow periodic forcing. We demonstrate that the thresholds for onset and offset of population firing can be found in the same way as those of the single cell. We combine theoretical analysis and numerical computations to develop a novel and comprehensive framework for excitability in large populations, applicable not only to models amenable to Ott-Antonsen reduction, but also to networks without a closed-form mean-field limit, in particular sparse networks.
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11
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Exact mean-field models for spiking neural networks with adaptation. J Comput Neurosci 2022; 50:445-469. [PMID: 35834100 DOI: 10.1007/s10827-022-00825-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Accepted: 06/15/2022] [Indexed: 10/17/2022]
Abstract
Networks of spiking neurons with adaption have been shown to be able to reproduce a wide range of neural activities, including the emergent population bursting and spike synchrony that underpin brain disorders and normal function. Exact mean-field models derived from spiking neural networks are extremely valuable, as such models can be used to determine how individual neurons and the network they reside within interact to produce macroscopic network behaviours. In the paper, we derive and analyze a set of exact mean-field equations for the neural network with spike frequency adaptation. Specifically, our model is a network of Izhikevich neurons, where each neuron is modeled by a two dimensional system consisting of a quadratic integrate and fire equation plus an equation which implements spike frequency adaptation. Previous work deriving a mean-field model for this type of network, relied on the assumption of sufficiently slow dynamics of the adaptation variable. However, this approximation did not succeed in establishing an exact correspondence between the macroscopic description and the realistic neural network, especially when the adaptation time constant was not large. The challenge lies in how to achieve a closed set of mean-field equations with the inclusion of the mean-field dynamics of the adaptation variable. We address this problem by using a Lorentzian ansatz combined with the moment closure approach to arrive at a mean-field system in the thermodynamic limit. The resulting macroscopic description is capable of qualitatively and quantitatively describing the collective dynamics of the neural network, including transition between states where the individual neurons exhibit asynchronous tonic firing and synchronous bursting. We extend the approach to a network of two populations of neurons and discuss the accuracy and efficacy of our mean-field approximations by examining all assumptions that are imposed during the derivation. Numerical bifurcation analysis of our mean-field models reveals bifurcations not previously observed in the models, including a novel mechanism for emergence of bursting in the network. We anticipate our results will provide a tractable and reliable tool to investigate the underlying mechanism of brain function and dysfunction from the perspective of computational neuroscience.
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12
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Ranft J, Lindner B. A self-consistent analytical theory for rotator networks under stochastic forcing: Effects of intrinsic noise and common input. CHAOS (WOODBURY, N.Y.) 2022; 32:063131. [PMID: 35778158 DOI: 10.1063/5.0096000] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Accepted: 05/23/2022] [Indexed: 06/15/2023]
Abstract
Despite the incredible complexity of our brains' neural networks, theoretical descriptions of neural dynamics have led to profound insights into possible network states and dynamics. It remains challenging to develop theories that apply to spiking networks and thus allow one to characterize the dynamic properties of biologically more realistic networks. Here, we build on recent work by van Meegen and Lindner who have shown that "rotator networks," while considerably simpler than real spiking networks and, therefore, more amenable to mathematical analysis, still allow one to capture dynamical properties of networks of spiking neurons. This framework can be easily extended to the case where individual units receive uncorrelated stochastic input, which can be interpreted as intrinsic noise. However, the assumptions of the theory do not apply anymore when the input received by the single rotators is strongly correlated among units. As we show, in this case, the network fluctuations become significantly non-Gaussian, which calls for reworking of the theory. Using a cumulant expansion, we develop a self-consistent analytical theory that accounts for the observed non-Gaussian statistics. Our theory provides a starting point for further studies of more general network setups and information transmission properties of these networks.
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Affiliation(s)
- Jonas Ranft
- Institut de Biologie de l'ENS, Ecole Normale Supérieure, CNRS, Inserm, Université PSL, 46 rue d'Ulm, 75005 Paris, France
| | - Benjamin Lindner
- Bernstein Center for Computational Neuroscience Berlin, Philippstraße 13, Haus 2, 10115 Berlin, Germany and Department of Physics, Humboldt University Berlin, Newtonstraße 15, 12489 Berlin, Germany
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13
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di Volo M, Segneri M, Goldobin DS, Politi A, Torcini A. Coherent oscillations in balanced neural networks driven by endogenous fluctuations. CHAOS (WOODBURY, N.Y.) 2022; 32:023120. [PMID: 35232059 DOI: 10.1063/5.0075751] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Accepted: 01/26/2022] [Indexed: 06/14/2023]
Abstract
We present a detailed analysis of the dynamical regimes observed in a balanced network of identical quadratic integrate-and-fire neurons with sparse connectivity for homogeneous and heterogeneous in-degree distributions. Depending on the parameter values, either an asynchronous regime or periodic oscillations spontaneously emerge. Numerical simulations are compared with a mean-field model based on a self-consistent Fokker-Planck equation (FPE). The FPE reproduces quite well the asynchronous dynamics in the homogeneous case by either assuming a Poissonian or renewal distribution for the incoming spike trains. An exact self-consistent solution for the mean firing rate obtained in the limit of infinite in-degree allows identifying balanced regimes that can be either mean- or fluctuation-driven. A low-dimensional reduction of the FPE in terms of circular cumulants is also considered. Two cumulants suffice to reproduce the transition scenario observed in the network. The emergence of periodic collective oscillations is well captured both in the homogeneous and heterogeneous setups by the mean-field models upon tuning either the connectivity or the input DC current. In the heterogeneous situation, we analyze also the role of structural heterogeneity.
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Affiliation(s)
- Matteo di Volo
- Laboratoire de Physique Théorique et Modélisation, UMR 8089, CY Cergy Paris Université, CNRS, 95302 Cergy-Pontoise, France
| | - Marco Segneri
- Laboratoire de Physique Théorique et Modélisation, UMR 8089, CY Cergy Paris Université, CNRS, 95302 Cergy-Pontoise, France
| | - Denis S Goldobin
- Institute of Continuous Media Mechanics, Ural Branch of RAS, Acad. Korolev street 1, 614013 Perm, Russia
| | - Antonio Politi
- Institute for Pure and Applied Mathematics and Department of Physics (SUPA), Old Aberdeen, Aberdeen AB24 3UE, United Kingdom
| | - Alessandro Torcini
- Laboratoire de Physique Théorique et Modélisation, UMR 8089, CY Cergy Paris Université, CNRS, 95302 Cergy-Pontoise, France
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14
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Bi H, di Volo M, Torcini A. Asynchronous and Coherent Dynamics in Balanced Excitatory-Inhibitory Spiking Networks. Front Syst Neurosci 2021; 15:752261. [PMID: 34955768 PMCID: PMC8702645 DOI: 10.3389/fnsys.2021.752261] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Accepted: 10/27/2021] [Indexed: 01/14/2023] Open
Abstract
Dynamic excitatory-inhibitory (E-I) balance is a paradigmatic mechanism invoked to explain the irregular low firing activity observed in the cortex. However, we will show that the E-I balance can be at the origin of other regimes observable in the brain. The analysis is performed by combining extensive simulations of sparse E-I networks composed of N spiking neurons with analytical investigations of low dimensional neural mass models. The bifurcation diagrams, derived for the neural mass model, allow us to classify the possible asynchronous and coherent behaviors emerging in balanced E-I networks with structural heterogeneity for any finite in-degree K. Analytic mean-field (MF) results show that both supra and sub-threshold balanced asynchronous regimes are observable in our system in the limit N >> K >> 1. Due to the heterogeneity, the asynchronous states are characterized at the microscopic level by the splitting of the neurons in to three groups: silent, fluctuation, and mean driven. These features are consistent with experimental observations reported for heterogeneous neural circuits. The coherent rhythms observed in our system can range from periodic and quasi-periodic collective oscillations (COs) to coherent chaos. These rhythms are characterized by regular or irregular temporal fluctuations joined to spatial coherence somehow similar to coherent fluctuations observed in the cortex over multiple spatial scales. The COs can emerge due to two different mechanisms. A first mechanism analogous to the pyramidal-interneuron gamma (PING), usually invoked for the emergence of γ-oscillations. The second mechanism is intimately related to the presence of current fluctuations, which sustain COs characterized by an essentially simultaneous bursting of the two populations. We observe period-doubling cascades involving the PING-like COs finally leading to the appearance of coherent chaos. Fluctuation driven COs are usually observable in our system as quasi-periodic collective motions characterized by two incommensurate frequencies. However, for sufficiently strong current fluctuations these collective rhythms can lock. This represents a novel mechanism of frequency locking in neural populations promoted by intrinsic fluctuations. COs are observable for any finite in-degree K, however, their existence in the limit N >> K >> 1 appears as uncertain.
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Affiliation(s)
- Hongjie Bi
- CY Cergy Paris Université, Laboratoire de Physique Théorique et Modélisation, CNRS, UMR 8089, Cergy-Pontoise, France
- Neural Coding and Brain Computing Unit, Okinawa Institute of Science and Technology, Okinawa, Japan
| | - Matteo di Volo
- CY Cergy Paris Université, Laboratoire de Physique Théorique et Modélisation, CNRS, UMR 8089, Cergy-Pontoise, France
| | - Alessandro Torcini
- CY Cergy Paris Université, Laboratoire de Physique Théorique et Modélisation, CNRS, UMR 8089, Cergy-Pontoise, France
- CNR-Consiglio Nazionale delle Ricerche, Istituto dei Sistemi Complessi, Sesto Fiorentino, Italy
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15
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Gast R, Knösche TR, Schmidt H. Mean-field approximations of networks of spiking neurons with short-term synaptic plasticity. Phys Rev E 2021; 104:044310. [PMID: 34781468 DOI: 10.1103/physreve.104.044310] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 09/30/2021] [Indexed: 01/17/2023]
Abstract
Low-dimensional descriptions of spiking neural network dynamics are an effective tool for bridging different scales of organization of brain structure and function. Recent advances in deriving mean-field descriptions for networks of coupled oscillators have sparked the development of a new generation of neural mass models. Of notable interest are mean-field descriptions of all-to-all coupled quadratic integrate-and-fire (QIF) neurons, which have already seen numerous extensions and applications. These extensions include different forms of short-term adaptation considered to play an important role in generating and sustaining dynamic regimes of interest in the brain. It is an open question, however, whether the incorporation of presynaptic forms of synaptic plasticity driven by single neuron activity would still permit the derivation of mean-field equations using the same method. Here we discuss this problem using an established model of short-term synaptic plasticity at the single neuron level, for which we present two different approaches for the derivation of the mean-field equations. We compare these models with a recently proposed mean-field approximation that assumes stochastic spike timings. In general, the latter fails to accurately reproduce the macroscopic activity in networks of deterministic QIF neurons with distributed parameters. We show that the mean-field models we propose provide a more accurate description of the network dynamics, although they are mathematically more involved. Using bifurcation analysis, we find that QIF networks with presynaptic short-term plasticity can express regimes of periodic bursting activity as well as bistable regimes. Together, we provide novel insight into the macroscopic effects of short-term synaptic plasticity in spiking neural networks, as well as two different mean-field descriptions for future investigations of such networks.
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Affiliation(s)
- Richard Gast
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Thomas R Knösche
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Helmut Schmidt
- Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
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16
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Gerster M, Taher H, Škoch A, Hlinka J, Guye M, Bartolomei F, Jirsa V, Zakharova A, Olmi S. Patient-Specific Network Connectivity Combined With a Next Generation Neural Mass Model to Test Clinical Hypothesis of Seizure Propagation. Front Syst Neurosci 2021; 15:675272. [PMID: 34539355 PMCID: PMC8440880 DOI: 10.3389/fnsys.2021.675272] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 07/07/2021] [Indexed: 11/13/2022] Open
Abstract
Dynamics underlying epileptic seizures span multiple scales in space and time, therefore, understanding seizure mechanisms requires identifying the relations between seizure components within and across these scales, together with the analysis of their dynamical repertoire. In this view, mathematical models have been developed, ranging from single neuron to neural population. In this study, we consider a neural mass model able to exactly reproduce the dynamics of heterogeneous spiking neural networks. We combine mathematical modeling with structural information from non invasive brain imaging, thus building large-scale brain network models to explore emergent dynamics and test the clinical hypothesis. We provide a comprehensive study on the effect of external drives on neuronal networks exhibiting multistability, in order to investigate the role played by the neuroanatomical connectivity matrices in shaping the emergent dynamics. In particular, we systematically investigate the conditions under which the network displays a transition from a low activity regime to a high activity state, which we identify with a seizure-like event. This approach allows us to study the biophysical parameters and variables leading to multiple recruitment events at the network level. We further exploit topological network measures in order to explain the differences and the analogies among the subjects and their brain regions, in showing recruitment events at different parameter values. We demonstrate, along with the example of diffusion-weighted magnetic resonance imaging (dMRI) connectomes of 20 healthy subjects and 15 epileptic patients, that individual variations in structural connectivity, when linked with mathematical dynamic models, have the capacity to explain changes in spatiotemporal organization of brain dynamics, as observed in network-based brain disorders. In particular, for epileptic patients, by means of the integration of the clinical hypotheses on the epileptogenic zone (EZ), i.e., the local network where highly synchronous seizures originate, we have identified the sequence of recruitment events and discussed their links with the topological properties of the specific connectomes. The predictions made on the basis of the implemented set of exact mean-field equations turn out to be in line with the clinical pre-surgical evaluation on recruited secondary networks.
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Affiliation(s)
- Moritz Gerster
- Institut für Theoretische Physik, Technische Universität Berlin, Berlin, Germany
| | - Halgurd Taher
- Inria Sophia Antipolis Méditerranée Research Centre, MathNeuro Team, Valbonne, France
| | - Antonín Škoch
- National Institute of Mental Health, Klecany, Czechia
- MR Unit, Department of Diagnostic and Interventional Radiology, Institute for Clinical and Experimental Medicine, Prague, Czechia
| | - Jaroslav Hlinka
- National Institute of Mental Health, Klecany, Czechia
- Institute of Computer Science of the Czech Academy of Sciences, Prague, Czechia
| | - Maxime Guye
- Faculté de Médecine de la Timone, Centre de Résonance Magnétique et Biologique et Médicale (CRMBM, UMR CNRS-AMU 7339), Medical School of Marseille, Aix-Marseille Université, Marseille, France
- Assistance Publique -Hôpitaux de Marseille, Hôpital de la Timone, Pôle d'Imagerie, Marseille, France
| | - Fabrice Bartolomei
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, Service de Neurophysiologie Clinique, Marseille, France
| | - Viktor Jirsa
- Aix Marseille Université, Inserm, Institut de Neurosciences des Systèmes, UMRS 1106, Marseille, France
| | - Anna Zakharova
- Institut für Theoretische Physik, Technische Universität Berlin, Berlin, Germany
| | - Simona Olmi
- Inria Sophia Antipolis Méditerranée Research Centre, MathNeuro Team, Valbonne, France
- Consiglio Nazionale delle Ricerche, Istituto dei Sistemi Complessi, Sesto Fiorentino, Italy
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17
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Goldobin DS. Mean-field models of populations of quadratic integrate-and-fire neurons with noise on the basis of the circular cumulant approach. CHAOS (WOODBURY, N.Y.) 2021; 31:083112. [PMID: 34470229 DOI: 10.1063/5.0061575] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Accepted: 07/20/2021] [Indexed: 06/13/2023]
Abstract
We develop a circular cumulant representation for the recurrent network of quadratic integrate-and-fire neurons subject to noise. The synaptic coupling is global or macroscopically equivalent to it. We assume a Lorentzian distribution of the parameter controlling whether the isolated individual neuron is periodically spiking or excitable. For the infinite chain of circular cumulant equations, a hierarchy of smallness is identified; on the basis of it, we truncate the chain and suggest several two-cumulant neural mass models. These models allow one to go beyond the Ott-Antonsen Ansatz and describe the effect of noise on hysteretic transitions between macroscopic regimes of a population with inhibitory coupling. The accuracy of two-cumulant models is analyzed in detail.
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Affiliation(s)
- Denis S Goldobin
- Institute of Continuous Media Mechanics, UB RAS, Academician Korolev Street 1, 614013 Perm, Russia
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18
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Goldobin DS, di Volo M, Torcini A. Reduction Methodology for Fluctuation Driven Population Dynamics. PHYSICAL REVIEW LETTERS 2021; 127:038301. [PMID: 34328756 DOI: 10.1103/physrevlett.127.038301] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 03/24/2021] [Accepted: 06/14/2021] [Indexed: 06/13/2023]
Abstract
Lorentzian distributions have been largely employed in statistical mechanics to obtain exact results for heterogeneous systems. Analytic continuation of these results is impossible even for slightly deformed Lorentzian distributions due to the divergence of all the moments (cumulants). We have solved this problem by introducing a "pseudocumulants" expansion. This allows us to develop a reduction methodology for heterogeneous spiking neural networks subject to extrinsic and endogenous fluctuations, thus obtaining a unified mean-field formulation encompassing quenched and dynamical sources of disorder.
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Affiliation(s)
- Denis S Goldobin
- Institute of Continuous Media Mechanics, Ural Branch of RAS, Acad. Korolev Street 1, 614013 Perm, Russia
- Department of Theoretical Physics, Perm State University, Bukirev Street 15, 614990 Perm, Russia
| | - Matteo di Volo
- Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, 95302 Cergy-Pontoise cedex, France
| | - Alessandro Torcini
- Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, 95302 Cergy-Pontoise cedex, France
- CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, via Madonna del Piano 10, I-50019 Sesto Fiorentino, Italy
- INFN Sezione di Firenze, Via Sansone 1, I-50019 Sesto Fiorentino, Florence, Italy
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19
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Klinshov V, Kirillov S, Nekorkin V. Reduction of the collective dynamics of neural populations with realistic forms of heterogeneity. Phys Rev E 2021; 103:L040302. [PMID: 34005994 DOI: 10.1103/physreve.103.l040302] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 03/16/2021] [Indexed: 11/07/2022]
Abstract
Reduction of collective dynamics of large heterogeneous populations to low-dimensional mean-field models is an important task of modern theoretical neuroscience. Such models can be derived from microscopic equations, for example with the help of Ott-Antonsen theory. An often used assumption of the Lorentzian distribution of the unit parameters makes the reduction especially efficient. However, the Lorentzian distribution is often implausible as having undefined moments, and the collective behavior of populations with other distributions needs to be studied. In the present Letter we propose a method which allows efficient reduction for an arbitrary distribution and show how it performs for the Gaussian distribution. We show that a reduced system for several macroscopic complex variables provides an accurate description of a population of thousands of neurons. Using this reduction technique we demonstrate that the population dynamics depends significantly on the form of its parameter distribution. In particular, the dynamics of populations with Lorentzian and Gaussian distributions with the same center and width differ drastically.
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Affiliation(s)
- Vladimir Klinshov
- Institute of Applied Physics of the Russian Academy of Sciences, 46 Ul'yanov Street, 603950 Nizhny Novgorod, Russia
| | - Sergey Kirillov
- Institute of Applied Physics of the Russian Academy of Sciences, 46 Ul'yanov Street, 603950 Nizhny Novgorod, Russia
| | - Vladimir Nekorkin
- Institute of Applied Physics of the Russian Academy of Sciences, 46 Ul'yanov Street, 603950 Nizhny Novgorod, Russia
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20
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Exact neural mass model for synaptic-based working memory. PLoS Comput Biol 2020; 16:e1008533. [PMID: 33320855 PMCID: PMC7771880 DOI: 10.1371/journal.pcbi.1008533] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 12/29/2020] [Accepted: 11/12/2020] [Indexed: 01/29/2023] Open
Abstract
A synaptic theory of Working Memory (WM) has been developed in the last decade as a possible alternative to the persistent spiking paradigm. In this context, we have developed a neural mass model able to reproduce exactly the dynamics of heterogeneous spiking neural networks encompassing realistic cellular mechanisms for short-term synaptic plasticity. This population model reproduces the macroscopic dynamics of the network in terms of the firing rate and the mean membrane potential. The latter quantity allows us to gain insight of the Local Field Potential and electroencephalographic signals measured during WM tasks to characterize the brain activity. More specifically synaptic facilitation and depression integrate each other to efficiently mimic WM operations via either synaptic reactivation or persistent activity. Memory access and loading are related to stimulus-locked transient oscillations followed by a steady-state activity in the β-γ band, thus resembling what is observed in the cortex during vibrotactile stimuli in humans and object recognition in monkeys. Memory juggling and competition emerge already by loading only two items. However more items can be stored in WM by considering neural architectures composed of multiple excitatory populations and a common inhibitory pool. Memory capacity depends strongly on the presentation rate of the items and it maximizes for an optimal frequency range. In particular we provide an analytic expression for the maximal memory capacity. Furthermore, the mean membrane potential turns out to be a suitable proxy to measure the memory load, analogously to event driven potentials in experiments on humans. Finally we show that the γ power increases with the number of loaded items, as reported in many experiments, while θ and β power reveal non monotonic behaviours. In particular, β and γ rhythms are crucially sustained by the inhibitory activity, while the θ rhythm is controlled by excitatory synapses. Working Memory (WM) is the ability to temporarily store and manipulate stimuli representations that are no longer available to the senses. We have developed an innovative coarse-grained population model able to mimic several operations associated to WM. The novelty of the model consists in reproducing exactly the dynamics of spiking neural networks with realistic synaptic plasticity composed of hundreds of thousands of neurons in terms of a few macroscopic variables. These variables give access to experimentally measurable quantities such as local field potentials and electroencephalographic signals. Memory operations are joined to sustained or transient oscillations emerging in different frequency bands, in accordance with experimental results for primate and humans performing WM tasks. We have designed an architecture composed of many excitatory populations and a common inhibitory pool able to store and retain several memory items. The capacity of our multi-item architecture is around 3–5 items, a value similar to the WM capacities measured in many experiments. Furthermore, the maximal capacity is achievable only for presentation rates within an optimal frequency range. Finally, we have defined a measure of the memory load analogous to the event-related potentials employed to test humans’ WM capacity during visual memory tasks.
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21
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Montbrió E, Pazó D. Exact Mean-Field Theory Explains the Dual Role of Electrical Synapses in Collective Synchronization. PHYSICAL REVIEW LETTERS 2020; 125:248101. [PMID: 33412049 DOI: 10.1103/physrevlett.125.248101] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 11/18/2020] [Accepted: 11/18/2020] [Indexed: 06/12/2023]
Abstract
Electrical synapses play a major role in setting up neuronal synchronization, but the precise mechanisms whereby these synapses contribute to synchrony are subtle and remain elusive. To investigate these mechanisms mean-field theories for quadratic integrate-and-fire neurons with electrical synapses have been recently put forward. Still, the validity of these theories is controversial since they assume that the neurons produce unrealistic, symmetric spikes, ignoring the well-known impact of spike shape on synchronization. Here, we show that the assumption of symmetric spikes can be relaxed in such theories. The resulting mean-field equations reveal a dual role of electrical synapses: First, they equalize membrane potentials favoring the emergence of synchrony. Second, electrical synapses act as "virtual chemical synapses," which can be either excitatory or inhibitory depending upon the spike shape. Our results offer a precise mathematical explanation of the intricate effect of electrical synapses in collective synchronization. This reconciles previous theoretical and numerical works, and confirms the suitability of recent low-dimensional mean-field theories to investigate electrically coupled neuronal networks.
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Affiliation(s)
- Ernest Montbrió
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, 08003 Barcelona, Spain
| | - Diego Pazó
- Instituto de Física de Cantabria (IFCA), CSIC-Universidad de Cantabria, 39005 Santander, Spain
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22
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Segneri M, Bi H, Olmi S, Torcini A. Theta-Nested Gamma Oscillations in Next Generation Neural Mass Models. Front Comput Neurosci 2020; 14:47. [PMID: 32547379 PMCID: PMC7270590 DOI: 10.3389/fncom.2020.00047] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Accepted: 04/30/2020] [Indexed: 11/21/2022] Open
Abstract
Theta-nested gamma oscillations have been reported in many areas of the brain and are believed to represent a fundamental mechanism to transfer information across spatial and temporal scales. In a series of recent experiments in vitro it has been possible to replicate with an optogenetic theta frequency stimulation several features of cross-frequency coupling (CFC) among theta and gamma rhythms observed in behaving animals. In order to reproduce the main findings of these experiments we have considered a new class of neural mass models able to reproduce exactly the macroscopic dynamics of spiking neural networks. In this framework, we have examined two set-ups able to support collective gamma oscillations: namely, the pyramidal interneuronal network gamma (PING) and the interneuronal network gamma (ING). In both set-ups we observe the emergence of theta-nested gamma oscillations by driving the system with a sinusoidal theta-forcing in proximity of a Hopf bifurcation. These mixed rhythms always display phase amplitude coupling. However, two different types of nested oscillations can be identified: one characterized by a perfect phase locking between theta and gamma rhythms, corresponding to an overall periodic behavior; another one where the locking is imperfect and the dynamics is quasi-periodic or even chaotic. From our analysis it emerges that the locked states are more frequent in the ING set-up. In agreement with the experiments, we find theta-nested gamma oscillations for forcing frequencies in the range [1:10] Hz, whose amplitudes grow proportionally to the forcing intensity and which are clearly modulated by the theta phase. Furthermore, analogously to the experiments, the gamma power and the frequency of the gamma-power peak increase with the forcing amplitude. At variance with experimental findings, the gamma-power peak does not shift to higher frequencies by increasing the theta frequency. This effect can be obtained, in our model, only by incrementing, at the same time, also the stimulation power. An effect achieved by increasing the amplitude either of the noise or of the forcing term proportionally to the theta frequency. On the basis of our analysis both the PING and the ING mechanism give rise to theta-nested gamma oscillations with almost identical features.
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Affiliation(s)
- Marco Segneri
- Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, Cergy-Pontoise, France
| | - Hongjie Bi
- Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, Cergy-Pontoise, France.,Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan
| | - Simona Olmi
- Inria Sophia Antipolis Méditerranée Research Centre, Valbonne, France.,CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, Sesto Fiorentino, Italy
| | - Alessandro Torcini
- Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, Cergy-Pontoise, France.,CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, Sesto Fiorentino, Italy
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23
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Bick C, Goodfellow M, Laing CR, Martens EA. Understanding the dynamics of biological and neural oscillator networks through exact mean-field reductions: a review. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2020; 10:9. [PMID: 32462281 PMCID: PMC7253574 DOI: 10.1186/s13408-020-00086-9] [Citation(s) in RCA: 95] [Impact Index Per Article: 23.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Accepted: 05/07/2020] [Indexed: 05/03/2023]
Abstract
Many biological and neural systems can be seen as networks of interacting periodic processes. Importantly, their functionality, i.e., whether these networks can perform their function or not, depends on the emerging collective dynamics of the network. Synchrony of oscillations is one of the most prominent examples of such collective behavior and has been associated both with function and dysfunction. Understanding how network structure and interactions, as well as the microscopic properties of individual units, shape the emerging collective dynamics is critical to find factors that lead to malfunction. However, many biological systems such as the brain consist of a large number of dynamical units. Hence, their analysis has either relied on simplified heuristic models on a coarse scale, or the analysis comes at a huge computational cost. Here we review recently introduced approaches, known as the Ott-Antonsen and Watanabe-Strogatz reductions, allowing one to simplify the analysis by bridging small and large scales. Thus, reduced model equations are obtained that exactly describe the collective dynamics for each subpopulation in the oscillator network via few collective variables only. The resulting equations are next-generation models: Rather than being heuristic, they exactly link microscopic and macroscopic descriptions and therefore accurately capture microscopic properties of the underlying system. At the same time, they are sufficiently simple to analyze without great computational effort. In the last decade, these reduction methods have become instrumental in understanding how network structure and interactions shape the collective dynamics and the emergence of synchrony. We review this progress based on concrete examples and outline possible limitations. Finally, we discuss how linking the reduced models with experimental data can guide the way towards the development of new treatment approaches, for example, for neurological disease.
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Affiliation(s)
- Christian Bick
- Centre for Systems, Dynamics, and Control, University of Exeter, Exeter, UK.
- Department of Mathematics, University of Exeter, Exeter, UK.
- EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, UK.
- Mathematical Institute, University of Oxford, Oxford, UK.
- Institute for Advanced Study, Technische Universität München, Garching, Germany.
| | - Marc Goodfellow
- Department of Mathematics, University of Exeter, Exeter, UK
- EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, UK
- Living Systems Institute, University of Exeter, Exeter, UK
- Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, UK
| | - Carlo R Laing
- School of Natural and Computational Sciences, Massey University, Auckland, New Zealand
| | - Erik A Martens
- Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kgs. Lyngby, Denmark.
- Department of Biomedical Science, University of Copenhagen, Copenhagen N, Denmark.
- Centre for Translational Neuroscience, University of Copenhagen, Copenhagen N, Denmark.
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24
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Lin L, Barreto E, So P. Synaptic Diversity Suppresses Complex Collective Behavior in Networks of Theta Neurons. Front Comput Neurosci 2020; 14:44. [PMID: 32528269 PMCID: PMC7264118 DOI: 10.3389/fncom.2020.00044] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Accepted: 04/29/2020] [Indexed: 11/13/2022] Open
Abstract
Comprehending how the brain functions requires an understanding of the dynamics of neuronal assemblies. Previous work used a mean-field reduction method to determine the collective dynamics of a large heterogeneous network of uniformly and globally coupled theta neurons, which are a canonical formulation of Type I neurons. However, in modeling neuronal networks, it is unreasonable to assume that the coupling strength between every pair of neurons is identical. The goal in the present work is to analytically examine the collective macroscopic behavior of a network of theta neurons that is more realistic in that it includes heterogeneity in the coupling strength as well as in neuronal excitability. We consider the occurrence of dynamical structures that give rise to complicated dynamics via bifurcations of macroscopic collective quantities, concentrating on two biophysically relevant cases: (1) predominantly excitable neurons with mostly excitatory connections, and (2) predominantly spiking neurons with inhibitory connections. We find that increasing the synaptic diversity moves these dynamical structures to distant extremes of parameter space, leaving simple collective equilibrium states in the physiologically relevant region. We also study the node vs. focus nature of stable macroscopic equilibrium solutions and discuss our results in the context of recent literature.
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Affiliation(s)
- Lucas Lin
- Department of Computer Science, Stanford University, Stanford, CA, United States
| | - Ernest Barreto
- Department of Physics and Astronomy and Interdisciplinary Program in Neuroscience, George Mason University, Fairfax, VA, United States
| | - Paul So
- Department of Physics and Astronomy and Interdisciplinary Program in Neuroscience, George Mason University, Fairfax, VA, United States
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25
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Ceni A, Olmi S, Torcini A, Angulo-Garcia D. Cross frequency coupling in next generation inhibitory neural mass models. CHAOS (WOODBURY, N.Y.) 2020; 30:053121. [PMID: 32491891 DOI: 10.1063/1.5125216] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Accepted: 04/22/2020] [Indexed: 06/11/2023]
Abstract
Coupling among neural rhythms is one of the most important mechanisms at the basis of cognitive processes in the brain. In this study, we consider a neural mass model, rigorously obtained from the microscopic dynamics of an inhibitory spiking network with exponential synapses, able to autonomously generate collective oscillations (COs). These oscillations emerge via a super-critical Hopf bifurcation, and their frequencies are controlled by the synaptic time scale, the synaptic coupling, and the excitability of the neural population. Furthermore, we show that two inhibitory populations in a master-slave configuration with different synaptic time scales can display various collective dynamical regimes: damped oscillations toward a stable focus, periodic and quasi-periodic oscillations, and chaos. Finally, when bidirectionally coupled, the two inhibitory populations can exhibit different types of θ-γ cross-frequency couplings (CFCs): phase-phase and phase-amplitude CFC. The coupling between θ and γ COs is enhanced in the presence of an external θ forcing, reminiscent of the type of modulation induced in hippocampal and cortex circuits via optogenetic drive.
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Affiliation(s)
- Andrea Ceni
- Department of Computer Science, College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter EX4 4QF, United Kingdom
| | - Simona Olmi
- Inria Sophia Antipolis Méditerranée Research Centre, 2004 Route des Lucioles, 06902 Valbonne, France
| | - Alessandro Torcini
- Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, 95302 Cergy-Pontoise cedex, France
| | - David Angulo-Garcia
- Grupo de Modelado Computacional-Dinámica y Complejidad de Sistemas, Instituto de Matemáticas Aplicadas, Universidad de Cartagena, Carrera 6 #36-100, 130001 Cartagena de Indias, Colombia
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26
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Pietras B, Devalle F, Roxin A, Daffertshofer A, Montbrió E. Exact firing rate model reveals the differential effects of chemical versus electrical synapses in spiking networks. Phys Rev E 2020; 100:042412. [PMID: 31771022 DOI: 10.1103/physreve.100.042412] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2019] [Indexed: 01/09/2023]
Abstract
Chemical and electrical synapses shape the dynamics of neuronal networks. Numerous theoretical studies have investigated how each of these types of synapses contributes to the generation of neuronal oscillations, but their combined effect is less understood. This limitation is further magnified by the impossibility of traditional neuronal mean-field models-also known as firing rate models or firing rate equations-to account for electrical synapses. Here, we introduce a firing rate model that exactly describes the mean-field dynamics of heterogeneous populations of quadratic integrate-and-fire (QIF) neurons with both chemical and electrical synapses. The mathematical analysis of the firing rate model reveals a well-established bifurcation scenario for networks with chemical synapses, characterized by a codimension-2 cusp point and persistent states for strong recurrent excitatory coupling. The inclusion of electrical coupling generally implies neuronal synchrony by virtue of a supercritical Hopf bifurcation. This transforms the cusp scenario into a bifurcation scenario characterized by three codimension-2 points (cusp, Takens-Bogdanov, and saddle-node separatrix loop), which greatly reduces the possibility for persistent states. This is generic for heterogeneous QIF networks with both chemical and electrical couplings. Our results agree with several numerical studies on the dynamics of large networks of heterogeneous spiking neurons with electrical and chemical couplings.
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Affiliation(s)
- Bastian Pietras
- Faculty of Behavioural and Movement Sciences, Amsterdam Movement Sciences & Institute of Brain and Behavior Amsterdam, Vrije Universiteit Amsterdam, van der Boechorststraat 9, Amsterdam 1081 BT, The Netherlands.,Department of Physics, Lancaster University, Lancaster LA1 4YB, United Kingdom.,Institute of Mathematics, Technical University Berlin, 10623 Berlin, Germany.,Bernstein Center for Computational Neuroscience Berlin, 10115 Berlin, Germany
| | - Federico Devalle
- Department of Physics, Lancaster University, Lancaster LA1 4YB, United Kingdom.,Department of Information and Communication Technologies, Universitat Pompeu Fabra, 08003 Barcelona, Spain
| | - Alex Roxin
- Centre de Recerca Matemàtica, Campus de Bellaterra, Edifici C, 08193 Bellaterra (Barcelona), Spain.,Barcelona Graduate School of Mathematics, 08193 Barcelona, Spain
| | - Andreas Daffertshofer
- Faculty of Behavioural and Movement Sciences, Amsterdam Movement Sciences & Institute of Brain and Behavior Amsterdam, Vrije Universiteit Amsterdam, van der Boechorststraat 9, Amsterdam 1081 BT, The Netherlands
| | - Ernest Montbrió
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, 08003 Barcelona, Spain
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Carlu M, Chehab O, Dalla Porta L, Depannemaecker D, Héricé C, Jedynak M, Köksal Ersöz E, Muratore P, Souihel S, Capone C, Zerlaut Y, Destexhe A, di Volo M. A mean-field approach to the dynamics of networks of complex neurons, from nonlinear Integrate-and-Fire to Hodgkin-Huxley models. J Neurophysiol 2020; 123:1042-1051. [PMID: 31851573 PMCID: PMC7099478 DOI: 10.1152/jn.00399.2019] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Revised: 12/05/2019] [Accepted: 12/09/2019] [Indexed: 11/22/2022] Open
Abstract
We present a mean-field formalism able to predict the collective dynamics of large networks of conductance-based interacting spiking neurons. We apply this formalism to several neuronal models, from the simplest Adaptive Exponential Integrate-and-Fire model to the more complex Hodgkin-Huxley and Morris-Lecar models. We show that the resulting mean-field models are capable of predicting the correct spontaneous activity of both excitatory and inhibitory neurons in asynchronous irregular regimes, typical of cortical dynamics. Moreover, it is possible to quantitatively predict the population response to external stimuli in the form of external spike trains. This mean-field formalism therefore provides a paradigm to bridge the scale between population dynamics and the microscopic complexity of the individual cells physiology.NEW & NOTEWORTHY Population models are a powerful mathematical tool to study the dynamics of neuronal networks and to simulate the brain at macroscopic scales. We present a mean-field model capable of quantitatively predicting the temporal dynamics of a network of complex spiking neuronal models, from Integrate-and-Fire to Hodgkin-Huxley, thus linking population models to neurons electrophysiology. This opens a perspective on generating biologically realistic mean-field models from electrophysiological recordings.
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Affiliation(s)
- M. Carlu
- Department of Integrative and Computational Neuroscience, Paris-Saclay Institute of Neuroscience, Centre National de la Recherche Scientifique, Gif sur Yvette, France
| | - O. Chehab
- Ecole Normale Superieure Paris-Saclay, France
| | - L. Dalla Porta
- Institut d’Investigacions Biomèdiques August Pi i Sunyer, Barcelona, Spain
| | - D. Depannemaecker
- Department of Integrative and Computational Neuroscience, Paris-Saclay Institute of Neuroscience, Centre National de la Recherche Scientifique, Gif sur Yvette, France
| | - C. Héricé
- Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, Scotland, United Kingdom
| | - M. Jedynak
- Université Grenoble Alpes, Grenoble Institut des Neurosciences and Institut National de la Santé et de la Recherche Médicale (INSERM), U1216, France
| | - E. Köksal Ersöz
- INSERM, U1099, Rennes, France
- MathNeuro Team, Inria Sophia Antipolis Méditerranée, Sophia Antipolis, France
| | - P. Muratore
- Physics Department, Sapienza University, Rome, Italy
| | - S. Souihel
- Université Côte d’Azur, Inria Sophia Antipolis Méditerranée, France
| | - C. Capone
- Department of Integrative and Computational Neuroscience, Paris-Saclay Institute of Neuroscience, Centre National de la Recherche Scientifique, Gif sur Yvette, France
| | - Y. Zerlaut
- Department of Integrative and Computational Neuroscience, Paris-Saclay Institute of Neuroscience, Centre National de la Recherche Scientifique, Gif sur Yvette, France
| | - A. Destexhe
- Department of Integrative and Computational Neuroscience, Paris-Saclay Institute of Neuroscience, Centre National de la Recherche Scientifique, Gif sur Yvette, France
| | - M. di Volo
- Department of Integrative and Computational Neuroscience, Paris-Saclay Institute of Neuroscience, Centre National de la Recherche Scientifique, Gif sur Yvette, France
- Laboratoire de Physique Théorique et Modelisation, Université de Cergy-Pontoise, Cergy-Pontoise, France
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Goldman JS, Tort-Colet N, di Volo M, Susin E, Bouté J, Dali M, Carlu M, Nghiem TA, Górski T, Destexhe A. Bridging Single Neuron Dynamics to Global Brain States. Front Syst Neurosci 2019; 13:75. [PMID: 31866837 PMCID: PMC6908479 DOI: 10.3389/fnsys.2019.00075] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Accepted: 11/19/2019] [Indexed: 11/13/2022] Open
Abstract
Biological neural networks produce information backgrounds of multi-scale spontaneous activity that become more complex in brain states displaying higher capacities for cognition, for instance, attentive awake versus asleep or anesthetized states. Here, we review brain state-dependent mechanisms spanning ion channel currents (microscale) to the dynamics of brain-wide, distributed, transient functional assemblies (macroscale). Not unlike how microscopic interactions between molecules underlie structures formed in macroscopic states of matter, using statistical physics, the dynamics of microscopic neural phenomena can be linked to macroscopic brain dynamics through mesoscopic scales. Beyond spontaneous dynamics, it is observed that stimuli evoke collapses of complexity, most remarkable over high dimensional, asynchronous, irregular background dynamics during consciousness. In contrast, complexity may not be further collapsed beyond synchrony and regularity characteristic of unconscious spontaneous activity. We propose that increased dimensionality of spontaneous dynamics during conscious states supports responsiveness, enhancing neural networks' emergent capacity to robustly encode information over multiple scales.
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Affiliation(s)
- Jennifer S. Goldman
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Núria Tort-Colet
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Matteo di Volo
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Eduarda Susin
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Jules Bouté
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Melissa Dali
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Mallory Carlu
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | | | - Tomasz Górski
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
| | - Alain Destexhe
- Department of Integrative and Computational Neuroscience (ICN), Centre National de la Recherche Scientifique (CNRS), Paris-Saclay Institute of Neuroscience (NeuroPSI), Gif-sur-Yvette, France
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Ratas I, Pyragas K. Noise-induced macroscopic oscillations in a network of synaptically coupled quadratic integrate-and-fire neurons. Phys Rev E 2019; 100:052211. [PMID: 31869871 DOI: 10.1103/physreve.100.052211] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Indexed: 05/26/2023]
Abstract
We consider the effect of small independent local noise on a network of quadratic integrate-and-fire neurons, globally coupled via synaptic pulses of finite width. The Fokker-Planck equation for a network of infinite size is reduced to a low-dimensional system of ordinary differential equations using the recently proposed perturbation theory based on circular cumulants. A bifurcation analysis of the reduced equations is performed, and areas in the parameter space, where the noise causes macroscopic oscillations of the network, are determined. The validity of the reduced equations is verified by comparing their solutions with "exact" solutions of the Fokker-Planck equation, as well as with the results of direct simulation of stochastic microscopic dynamics of a finite-size network.
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Affiliation(s)
- Irmantas Ratas
- Center for Physical Sciences and Technology, LT-10257 Vilnius, Lithuania
| | - Kestutis Pyragas
- Center for Physical Sciences and Technology, LT-10257 Vilnius, Lithuania
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Luccioli S, Angulo-Garcia D, Torcini A. Neural activity of heterogeneous inhibitory spiking networks with delay. Phys Rev E 2019; 99:052412. [PMID: 31212434 DOI: 10.1103/physreve.99.052412] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Indexed: 11/07/2022]
Abstract
We study a network of spiking neurons with heterogeneous excitabilities connected via inhibitory delayed pulses. For globally coupled systems the increase of the inhibitory coupling reduces the number of firing neurons by following a winner-takes-all mechanism. For sufficiently large transmission delay we observe the emergence of collective oscillations in the system beyond a critical coupling value. Heterogeneity promotes neural inactivation and asynchronous dynamics and its effect can be counteracted by considering longer time delays. In sparse networks, inhibition has the counterintuitive effect of promoting neural reactivation of silent neurons for sufficiently large coupling. In this regime, current fluctuations are on one side responsible for neural firing of subthreshold neurons and on the other side for their desynchronization. Therefore, collective oscillations are present only in a limited range of coupling values, which remains finite in the thermodynamic limit. Out of this range the dynamics is asynchronous and for very large inhibition neurons display a bursting behavior alternating periods of silence with periods where they fire freely in absence of any inhibition.
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Affiliation(s)
- Stefano Luccioli
- CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy
| | - David Angulo-Garcia
- Grupo de Modelado Computacional-Dinámica y Complejidad de Sistemas. Instituto de Matemáticas Aplicadas. Universidad de Cartagena. Carrera 6 # 36 - 100, Cartagena de Indias, Colombia
| | - Alessandro Torcini
- CNR-Consiglio Nazionale delle Ricerche-Istituto dei Sistemi Complessi, via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy.,Laboratoire de Physique Théorique et Modélisation, Université de Cergy-Pontoise, CNRS, UMR 8089, 95302 Cergy-Pontoise cedex, France
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Jalan S, Kumar A, Leyva I. Explosive synchronization in frequency displaced multiplex networks. CHAOS (WOODBURY, N.Y.) 2019; 29:041102. [PMID: 31042936 DOI: 10.1063/1.5092226] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Accepted: 03/21/2019] [Indexed: 06/09/2023]
Abstract
Motivated by the recent multiplex framework of complex networks, in this work, we investigate if explosive synchronization can be induced in the multiplex network of two layers. Using nonidentical Kuramoto oscillators, we show that a sufficient frequency mismatch between two layers of a multiplex network can lead to explosive inter- and intralayer synchronization due to mutual frustration in the completion of the synchronization processes of the layers, generating a hybrid transition without imposing any specific structure-dynamics correlation.
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Affiliation(s)
- Sarika Jalan
- Complex Systems Lab, Discipline of Physics, Indian Institute of Technology Indore, Khandwa Road, Simrol, 453552 Indore, India
| | - Anil Kumar
- Complex Systems Lab, Discipline of Physics, Indian Institute of Technology Indore, Khandwa Road, Simrol, 453552 Indore, India
| | - Inmaculada Leyva
- Complex Systems Group & GISC, Universidad Rey Juan Carlos, 28933 Móstoles, Madrid, Spain
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