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Ghassemi-Golezani K, Rahimzadeh S. Biochar-based nutritional nanocomposites: a superior treatment for alleviating salt toxicity and improving physiological performance of dill (Anethum graveolens). ENVIRONMENTAL GEOCHEMISTRY AND HEALTH 2023; 45:3089-3111. [PMID: 36153765 DOI: 10.1007/s10653-022-01397-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 09/13/2022] [Indexed: 06/01/2023]
Abstract
Biochar-supported metal oxide nanocomposites as functional materials could help to improve the production and stress tolerance of plants by enhancing the physicochemical properties of biochar. This experiment was carried out to assess the effects of unmodified biochar (30 g kg-1 soil) and biochar-based nanocomposites (BNCs) of iron (30 g BNC-FeO kg-1 soil), zinc (30 g BNC-ZnO kg-1 soil), and a combined form (15 g BNC-FeO + 15 g BNC-ZnO kg-1 soil) on dill (Anethum graveolens L.) plants under various salinity levels (non-saline, 6 and 12 dS m-1). The biochar-related treatments reduced sodium content of the plants, leading to a decline in osmolytes, antioxidant enzymes activities, reactive oxygen species (ROS), lipid peroxidation, NADP reduction, abscisic acid, jasmonic acid, and salicylic acid in dill leaf tissues. The combined form of BNCs reduced sodium content of leaf tissue by about 22% and 26% under 6 and 12 dS m-1 salinities, respectively. In contrast, addition of biochar, particularly biochar-based nanocomposites to the saline soil, enhanced potassium, iron, and zinc contents of leaf tissue, photosynthetic pigments, leaf water content, oxygen evolution rate, hill reaction and ATPase activities, endogenous indole-3-acetic acid, plant organs biomass, and consequently essential oil yield of plant organs. The combined form of BNCs in comparison with unmodified biochar improved vegetative, inflorescence, and seed biomass under 12 dS m-1 salinity by about 33%, 25%, and 6%, respectively. These findings revealed that BNCs with novel structure can potentially enhance salt tolerance, plant biomass, and essential oil yield of different organs in salt-stressed dill plants through decreasing leaf sodium content and ROS generation and increasing nutrient availability, water status, and photosynthetic pigments.
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Affiliation(s)
- Kazem Ghassemi-Golezani
- Department of Plant Eco-Physiology, Faculty of Agriculture, University of Tabriz, Tabriz, Iran.
| | - Saeedeh Rahimzadeh
- Department of Plant Eco-Physiology, Faculty of Agriculture, University of Tabriz, Tabriz, Iran
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Elleuch J, Ben Amor F, Chaaben Z, Frikha F, Michaud P, Fendri I, Abdelkafi S. Zinc biosorption by Dunaliella sp. AL-1: Mechanism and effects on cell metabolism. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 773:145024. [PMID: 33582349 DOI: 10.1016/j.scitotenv.2021.145024] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Revised: 12/06/2020] [Accepted: 01/04/2021] [Indexed: 06/12/2023]
Abstract
Phycoremediation is being considered as an eco-friendly and safe technology for toxics eradication from contaminated aquatic systems. The zinc biosorption capacity of Dunaliella sp. AL-1 was demonstrated. Zinc impacted cell growth and photosynthetic pigments accumulation showing exposure time and concentration-dependent effects. The investigation of the antioxidant protective response to zinc exposition proved a stimulation of guaiacol peroxidase (GPX) activity and an increased rate of total phenolics, flavonoids, condensed tannins and glutathione (GSH). The Box-Behnken design was used to optimize zinc removal conditions by Dunaliella sp. AL-1 strain. The maximum experimental zinc uptake was obtained when zinc concentration, algae dose, initial pH, and contact time were set at 25 mg/L, 0.5 g/L, 7.59 and 13 h 43 min, respectively. Under completely optimized conditions, the fraction of zinc removed intracellularly was much lower than the adsorbed on the cell surface. FTIR analysis Dunaliella sp. AL-1 biomass demonstrated that several functional groups as OH, CH2, CO, PO, COO and CO may participate in the biosorption process. A comparative proteomic analysis through nano-HPLC coupled to LC-MS/MS, was performed from pre- and post-zinc treatments cells. Among 199 identified proteins, 60 were differentially expressed of which 41 proteins were down-regulated against 19 up-regulated ones. Target proteins have been demonstrated to be implicated in different metabolic processes mainly photosynthesis and antioxidant defenses.
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Affiliation(s)
- Jihen Elleuch
- Laboratoire de Génie Enzymatique et Microbiologie, Equipe Biotechnologie des Algues, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax, Tunisia
| | - Faten Ben Amor
- Laboratoire de Génie Enzymatique et Microbiologie, Equipe Biotechnologie des Algues, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax, Tunisia
| | - Zeineb Chaaben
- Laboratoire de Biotechnologies Végétales Appliquées à l'Amélioration des Cultures, Faculté des Sciences de Sfax, Université de Sfax, Sfax, Tunisia
| | - Fakher Frikha
- Laboratoire de Biochimie et Génie Enzymatique des Lipases, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax, Tunisia
| | - Philippe Michaud
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut Pascal, F-63000 Clermont-Ferrand, France
| | - Imen Fendri
- Laboratoire de Biotechnologies Végétales Appliquées à l'Amélioration des Cultures, Faculté des Sciences de Sfax, Université de Sfax, Sfax, Tunisia
| | - Slim Abdelkafi
- Laboratoire de Génie Enzymatique et Microbiologie, Equipe Biotechnologie des Algues, Ecole Nationale d'Ingénieurs de Sfax, Université de Sfax, Sfax, Tunisia.
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Lu X, Sun D, Zhang X, Hu H, Kong L, Rookes JE, Xie J, Cahill DM. Stimulation of photosynthesis and enhancement of growth and yield in Arabidopsis thaliana treated with amine-functionalized mesoporous silica nanoparticles. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 156:566-577. [PMID: 33065377 DOI: 10.1016/j.plaphy.2020.09.036] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 09/28/2020] [Indexed: 06/11/2023]
Abstract
Mesoporous silica nanoparticles (MSNs) of 50 nm diameter particle size with a pore size of approximately 14.7 nm were functionalized with amino groups (Am-MSNs) and the effects of exposure to these positively charged Am-MSNs on each of the life cycle stages of Arabidopsis thaliana were investigated. After growth in half strength MS medium amended with Am-MSNs (0-100 μg/mL) for 7 and 14 days, seed germination rate and seedling growth were significantly increased compared with untreated controls. The seedlings were then transferred to soil and irrigated with Am-MSNs solutions every 3 days until seed harvesting. After four weeks growth in soil, Am-MSNs treated plants showed up-regulation of chlorophyll and carotenoid synthesis-related genes, an increase in the content of photosynthetic pigments and an amplification of plant photosynthetic capacity. All these changes in plants were closely correlated with greater vegetative growth and higher seed yield. In all the experiments, 20 and 50 μg/mL of Am-MSNs were found to be more effective with respect to other treatments, while Am-MSNs at the highest level of 100 μg/mL did not result in oxidative stress or cell membrane damage in the exposed plants. To the best of our knowledge, this is the first report evaluating both physiological and molecular responses following exposure to plants of these specific Am-MSNs throughout their whole life cycle. Overall, these findings indicate that following exposure Am-MSNs play a major role in the increase in seed germination, biomass, photosynthetic pigments, photosynthetic capacity and seed yield in A. thaliana.
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Affiliation(s)
- Xinhua Lu
- Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture, South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science, Zhanjiang, 524091, China; Deakin University, School of Life and Environmental Sciences, Geelong Campus at Waurn Ponds, Victoria, 3216, Australia
| | - Dequan Sun
- Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture, South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science, Zhanjiang, 524091, China
| | - Xiumei Zhang
- Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture, South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science, Zhanjiang, 524091, China
| | - Huigang Hu
- Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture, South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science, Zhanjiang, 524091, China
| | - Lingxue Kong
- Deakin University, Institute for Frontier Materials, Geelong Campus at Waurn Ponds, Victoria, 3216, Australia
| | - James E Rookes
- Deakin University, School of Life and Environmental Sciences, Geelong Campus at Waurn Ponds, Victoria, 3216, Australia
| | - Jianghui Xie
- Key Laboratory of Tropical Fruit Biology, Ministry of Agriculture, South Subtropical Crop Research Institute, Chinese Academy of Tropical Agricultural Science, Zhanjiang, 524091, China.
| | - David M Cahill
- Deakin University, School of Life and Environmental Sciences, Geelong Campus at Waurn Ponds, Victoria, 3216, Australia.
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Singh PK, Wang W, Shrivastava AK. Cadmium-mediated morphological, biochemical and physiological tuning in three different Anabaena species. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2018; 202:36-45. [PMID: 30007153 DOI: 10.1016/j.aquatox.2018.06.011] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2018] [Revised: 06/17/2018] [Accepted: 06/18/2018] [Indexed: 06/08/2023]
Abstract
Cyanobacteria are a natural inhabitant of paddy field and enhance the crop productivity in an eco-friendly manner. Cadmium (Cd) is a perilous trace metal element which not only limits the crop productivity but also inhibits the growth and nitrogen-fixing ability of these diazotrophs as well as the biodiversity of rice field semiaquatic agroecosystems. However, the impact of Cd toxicity in diazotrophic cyanobacteria is yet not adequately addressed. Therefore, in the present study, three diazotrophic cyanobacterial species, i.e., Anabaena sp. PCC7120, Anabaena L31, and Anabaena doliolum were subjected to their LC50 doses of Cd, and their physiological (PSII, Psi, respiration, energy status and nitrogen fixation rate), biochemical variables (such as antioxidant contents and antioxidant enzymes) together with morphological parameters were evaluated. The results of physiological variables suggested that the Cd exposure adversely affects the photosynthesis, respiration, and biological nitrogen fixation ability across three Anabaena species. The results of biochemical variables in terms of accumulation of antioxidants (glutathione, thiol, phytochelatin and proline) content as well as antioxidant enzymes such as glutathione S-transferase (GST), glutathione reductase (GR), catalase-peroxidase (CAT), ascorbate peroxidase (APX) and superoxide dismutase (SOD) revealed that their inter-species stress tolerance behavior may be attributed to the differential accumulation of antioxidants as well as differential antioxidant enzyme activity in three species. Furthermore, the enhanced antioxidant enzymes activity such as GST, GR, CAT, and SOD in Anabaena L31 advocated significantly higher as compared to Anabaena PCC7120 and Anabaena doliolum. In conclusion, Cd-toxicity assessment regarding physiological, biochemical and morphological aspects across three species identified Anabaena L31 as Cd-resistant species than the other two tested species, i.e., Anabaena PCC7120 and Anabaena doliolum.
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Affiliation(s)
- Prashant Kumar Singh
- Molecular Biology Section, Centre for Advanced Study in Botany, Banaras Hindu University, Varanasi, 221005, India; Department of Vegetables and Field Crops, Institute of Plant Sciences, Agricultural Research Organization - The Volcani Center, Rishon LeZion, 7505101, Israel; State Key Laboratory of Cotton Biology, Henan Key Laboratory of Plant Stress Biology, School of Life Science, Henan University, Kaifeng, Henan 475004, PR China
| | - Wenjing Wang
- State Key Laboratory of Cotton Biology, Henan Key Laboratory of Plant Stress Biology, School of Life Science, Henan University, Kaifeng, Henan 475004, PR China; Department of Biology and Food Sciences, Shangqiu Normal University, Shangqiu, Henan, 476000 PR China
| | - Alok Kumar Shrivastava
- Department of Botany, Mahatma Gandhi Central University, Motihari, 845401, Bihar, India.
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Influence of Silver, Zinc Oxide and Copper Oxide Nanoparticles on the Cyanobacterium Calothrix elenkinii. BIONANOSCIENCE 2018. [DOI: 10.1007/s12668-018-0543-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Water-stress induced downsizing of light-harvesting antenna complex protects developing rice seedlings from photo-oxidative damage. Sci Rep 2018; 8:5955. [PMID: 29654242 PMCID: PMC5899091 DOI: 10.1038/s41598-017-14419-4] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 10/11/2017] [Indexed: 12/11/2022] Open
Abstract
The impact of water-stress on chloroplast development was studied by applying polyethylene glycol 6000 to the roots of 5-day-old etiolated rice (Oryza sativa) seedlings that were subsequently illuminated up to 72 h. Chloroplast development in drought environment led to down-regulation of light-harvesting Chl-proteins. Photosynthetic proteins of Photosystem II (PSII) and oxygen evolving complex i.e., Cytb559, OEC16, OEC23 and OEC33 as well as those of PSI such as PSI-III, PSI-V, and PSI-VI, decreased in abundance. Consequently, due to reduced light absorption by antennae, the electron transport rates of PSII and PSI decreased by 55% and 25% respectively. Further, seedling development in stress condition led to a decline in the ratio of variable (Fv) to maximum (Fm) Chl a fluorescence, as well in the quantum yield of PSII photochemistry. Addition of Mg2+ to the thylakoid membranes suggested that Mg2+-induced grana stacking was not affected by water deficit. Proteomic analysis revealed the down-regulation of proteins involved in electron transport and in carbon reduction reactions, and up-regulation of antioxidative enzymes. Our results demonstrate that developing seedlings under water deficit could downsize their light-harvesting capacity and components of photosynthetic apparatus to prevent photo-oxidative stress, excess ROS generation and membrane lipid peroxidation.
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Li M, Chen D, Liu Y, Chuang CY, Kong F, Harrison PJ, Zhu X, Jiang Y. Exposure of engineered nanoparticles to Alexandrium tamarense (Dinophyceae): Healthy impacts of nanoparticles via toxin-producing dinoflagellate. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 610-611:356-366. [PMID: 28806552 DOI: 10.1016/j.scitotenv.2017.05.170] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Revised: 05/17/2017] [Accepted: 05/19/2017] [Indexed: 06/07/2023]
Abstract
Human activities can enhance the frequency, intensity and occurrence of harmful algal blooms (HABs). Engineered nanoparticles (ENPs), contained in many materials, will inevitably enter coastal waters and thus cause unpredictable impacts on aquatic organisms. However, knowledge of the influence of ENPs on HAB species is still lacking. In this study, we examined the effects of titanium dioxide nanoparticles (nTiO2), zinc oxide nanoparticles (nZnO) and aluminum oxide nanoparticles (nAl2O3) on physiological changes and paralytic shellfish poisoning toxins (PSTs) production of Alexandrium tamarense. We found a dose-dependent decrease in photosynthetic activity of A. tamarense under all three ENPs and a significant growth inhibition induced by nZnO. The largest reactive oxygen species (ROS) production was induced by nTiO2, followed by nZnO and nAl2O3. Moreover, the PSTs production rate increased by 3.9-fold for nTiO2 (p<0.01) and 4.5-fold for nAl2O3 (p<0.01) at a concentration of 200mgL-1. The major component, C2 was transformed to its epimer C1 and the proportion of decarbamoyl toxins increased under 200mgL-1 of nZnO and nAl2O3. In addition, the proportion of carbamate toxins increased upon exposure to 2mgL-1 ENPs, while decreased upon exposure to 200mgL-1 ENPs. The changes in PSTs production and composition might be an adaptive response for A. tamarense to overcome the stress of ENPs exposure. This work brings the first evidence that ENP would affect PSTs production and profiles.
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Affiliation(s)
- Manlu Li
- Graduate School at Shenzhen, Tsinghua University, Shenzhen 518055, China; School of Environment, Tsinghua University, Beijing 100084, China
| | - Daoyi Chen
- Graduate School at Shenzhen, Tsinghua University, Shenzhen 518055, China; School of Environment, Tsinghua University, Beijing 100084, China
| | - Yang Liu
- Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; University of Chinese Academy of Sciences, Beijing 100039, China
| | - Chia Ying Chuang
- Research Center for Environmental Changes, Academia Sinica, Taipei, Taiwan
| | - Fanzhou Kong
- Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China; Laboratory of Marine Ecology and Environmental Science, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266071, China
| | - Paul J Harrison
- Dept Earth & Ocean Sciences, University of British Columbia, Vancouver, BC, Canada
| | - Xiaoshan Zhu
- Graduate School at Shenzhen, Tsinghua University, Shenzhen 518055, China; School of Environment, Tsinghua University, Beijing 100084, China
| | - Yuelu Jiang
- Graduate School at Shenzhen, Tsinghua University, Shenzhen 518055, China; School of Environment, Tsinghua University, Beijing 100084, China.
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Sen S, Rai S, Yadav S, Agrawal C, Rai R, Chatterjee A, Rai L. Dehydration and rehydration - induced temporal changes in cytosolic and membrane proteome of the nitrogen fixing cyanobacterium Anabaena sp. PCC 7120. ALGAL RES 2017. [DOI: 10.1016/j.algal.2017.09.012] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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9
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Wężowicz K, Rozpądek P, Turnau K. Interactions of arbuscular mycorrhizal and endophytic fungi improve seedling survival and growth in post-mining waste. MYCORRHIZA 2017; 27:499-511. [PMID: 28317065 PMCID: PMC5486607 DOI: 10.1007/s00572-017-0768-x] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Accepted: 03/10/2017] [Indexed: 05/08/2023]
Abstract
The impact of fungal endophytes and the modulating role of arbuscular mycorrhizal fungi (AMF) on the vitality of Verbascum lychnitis, grown in the laboratory in a substratum from a post-mining waste dump was investigated. We report that inoculation with a single endophyte negatively affected the survival rate and biomass production of most of the plant-endophyte consortia examined. The introduction of arbuscular mycorrhiza fungi into this setup (dual inoculation) had a beneficial effect on both biomass yield and survivability. V. lychnitis co-inoculated with AMF and Cochliobolus sativus, Diaporthe sp., and Phoma exigua var. exigua yielded the highest biomass, exceeding the growth rate of both non-inoculated and AMF plants. AMF significantly improved the photosynthesis rates of the plant-endophyte consortia, which were negatively affected by inoculation with single endophytes. The abundance of PsbC, a photosystem II core protein previously shown to be upregulated in plants colonized by Epichloe typhina, exhibited a significant increase when the negative effect of the fungal endophyte was attenuated by AMF.
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Affiliation(s)
- Katarzyna Wężowicz
- Institute of Environmental Sciences, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland
| | - Piotr Rozpądek
- Malopolska Centre of Biotechnology, Jagiellonian University, Gronostajowa 7A, 30-387, Kraków, Poland.
| | - Katarzyna Turnau
- Institute of Environmental Sciences, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland
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Peroxide reduction by a metal-dependent catalase in Nostoc punctiforme (cyanobacteria). Appl Microbiol Biotechnol 2017; 101:3781-3800. [DOI: 10.1007/s00253-017-8130-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2016] [Revised: 11/09/2016] [Accepted: 01/13/2017] [Indexed: 11/27/2022]
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A single gene all3940 (Dps) overexpression in Anabaena sp. PCC 7120 confers multiple abiotic stress tolerance via proteomic alterations. Funct Integr Genomics 2015; 16:67-78. [DOI: 10.1007/s10142-015-0467-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2015] [Revised: 09/20/2015] [Accepted: 09/24/2015] [Indexed: 12/19/2022]
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Ruhil K, Ahmad A, Iqbal M, Tripathy BC. Photosynthesis and growth responses of mustard (Brassica juncea L. cv Pusa Bold) plants to free air carbon dioxide enrichment (FACE). PROTOPLASMA 2015; 252:935-946. [PMID: 25471475 DOI: 10.1007/s00709-014-0723-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2014] [Accepted: 10/23/2014] [Indexed: 06/04/2023]
Abstract
Increased atmospheric [CO2] is likely to affect photosynthesis, plant growth, and yield potential of plants. Mustard (Brassica juncea L.) is an important oil seed crop that is widely grown in India. Therefore, the impact of elevated [CO2] (585 μmol mol(-1)) on pigment and protein content, chlorophyll a fluorescence, photosynthetic electron transport reactions, CO2 assimilation, biomass production, and seed yield potential was measured in B. juncea cv Pusa Bold, grown inside free air carbon dioxide enrichment (FACE) rings installed on the campus of Jawaharlal Nehru University, New Delhi, India. Plants were grown for three consecutive winter seasons (2010-2013), in ambient (385 μmol mol(-1)) or elevated [CO2], in field conditions. Elevated [CO2] had no significant effect on the minimal chlorophyll fluorescence (F 0), while the quantum efficiency of Photosystem II, measured as variable fluorescence (F v = F m-F 0) to maximum fluoresence (F m), increased by 3 %. Electron transport rate, photosystem I, photosystem II, and whole chain electron transport rates increased by 8 % in elevated [CO2]. However, the net photosynthesis rate increased by ≈50 % in three growing seasons under elevated [CO2] condition. The stomatal conductance and transpiration rate decreased resulting in higher photosynthetic water use efficiency. The photosynthesizing surface, i.e., leaf area index substantially increased leading to higher biomass and seed yield under elevated [CO2] condition. Acclimatory downregulation of photosynthesis and plant productivity was not observed in three consecutive growing years suggesting that in the absence of nutrient limitation, B. juncea is highly responsive to elevated CO2 whose yield potential shall increase in changing climatic conditions.
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Affiliation(s)
- Kamal Ruhil
- School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
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Singh PK, Shrivastava AK, Chatterjee A, Pandey S, Rai S, Singh S, Rai LC. Cadmium toxicity in diazotrophic Anabaena spp. adjudged by hasty up-accumulation of transporter and signaling and severe down-accumulation of nitrogen metabolism proteins. J Proteomics 2015; 127:134-46. [PMID: 26021478 DOI: 10.1016/j.jprot.2015.05.019] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Revised: 04/29/2015] [Accepted: 05/20/2015] [Indexed: 10/23/2022]
Abstract
Present study demonstrates interspecies variation in proteome and survival strategy of three Anabaena species i.e., Anabaena L31, Anabaena sp. PCC 7120 and Anabaena doliolum subjected to respective LC50 doses of Cd at 0, 1, 3, 5 and 7day intervals. The proteome coverage with 452 differentially accumulated proteins unveiled species and time specific expression and interaction network of proteins involved in important cellular functions. Statistical analysis of protein abundance across Cd-treated proteomes clustered their co-expression pattern into four groups viz., (i) early (days 1 and 3) accumulated proteins, (ii) proteins up-accumulated for longer duration, (iii) late (days 5 and 7) accumulated proteins, and (iv) mostly down-accumulated proteins. Appreciable growth of Cd treated A L31 over other two species may be ascribed to proteins contained in the first and second groups (belonging to energy and carbohydrate metabolism (TK, G6-PI, PGD, FBA, PPA, ATP synthase)), sulfur metabolism (GR, GST, PGDH, PAPS reductase, GDC-P, and SAM synthetase), fatty acid metabolism (AspD, PspA, SQD-1), phosphorous metabolism (PhoD, PstB and SQD1), molecular chaperones (Gro-EL, FKBP-type peptidylprolyl isomerase), and antioxidative defense enzymes (SOD-A, catalase). Anabaena sp. PCC 7120 harboring proteins largely from the third group qualified as a late accumulator and A. doliolum housing majority of proteins from the fourth group emerged as the most sensitive species. Thus early up-accumulation of transporter and signaling category proteins and drastic reduction of nitrogen assimilation proteins could be taken as a vital indicator of cadmium toxicity in Anabaena spp. This article is part of a Special Issue entitled: Proteomics in India.
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Affiliation(s)
- Prashant Kumar Singh
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Alok Kumar Shrivastava
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Antra Chatterjee
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Sarita Pandey
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Snigdha Rai
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Shilpi Singh
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - L C Rai
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India.
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14
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Shrivastava AK, Chatterjee A, Yadav S, Singh PK, Singh S, Rai LC. UV-B stress induced metabolic rearrangements explored with comparative proteomics in three Anabaena species. J Proteomics 2015; 127:122-33. [PMID: 25997677 DOI: 10.1016/j.jprot.2015.05.014] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Revised: 04/21/2015] [Accepted: 05/14/2015] [Indexed: 11/24/2022]
Abstract
Comparative proteomics together with physiological variables revealed different responses among three species of diazotrophic cyanobacterium Anabaena exposed to UV-B stress at the same time points. Perceptible decline in PSII activity, ATP pool, nitrogenase activity and respiration rate was observed for all the three species; this being maximum in Anabaena doliolum, followed by Anabaena sp. PCC 7120 and minimum in Anabaena L31. Statistical analysis of the protein abundance divided majority of them as early accumulated in A. L31, late accumulated in A. sp. PCC 7120 and downregulated in A. doliolum. Tolerance of A. L31 may be ascribed to post-translational modification reflected through the highest number of protein isoforms in its proteome followed by A. PCC 7120 and A. doliolum. Furthermore, increase in abundance of cyanophycinase, glutamine synthetase and succinate semialdehyde dehydrogenase in A. L31 suggests operation of an alternate pathway for assimilation of nitrogen and carbon under UV-B stress. An early accumulation of four proteins viz., glutamate ammonia ligase (Alr2328), transketolase (Alr3344), inorganic pyrophosphatase (All3570), and trigger protein (Alr3681) involved respectively in amino acid metabolism, energy metabolism, biosynthesis of cofactor and trigger protein and chaperone like activity across three species, suggests them to be marker of UV-B stress in Anabaena spp. This article is part of a Special Issue entitled: Proteomics in India.
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Affiliation(s)
- Alok Kumar Shrivastava
- Molecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Antra Chatterjee
- Molecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Shivam Yadav
- Molecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Prashant Kumar Singh
- Molecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Shilpi Singh
- Molecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - L C Rai
- Molecular Biology Section, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India..
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Pradhan S, Patra P, Mitra S, Dey KK, Basu S, Chandra S, Palit P, Goswami A. Copper nanoparticle (CuNP) nanochain arrays with a reduced toxicity response: a biophysical and biochemical outlook on Vigna radiata. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2015; 63:2606-2617. [PMID: 25686266 DOI: 10.1021/jf504614w] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Copper deficiency or toxicity in agricultural soil circumscribes a plant's growth and physiology, hampering photochemical and biochemical networks within the system. So far, copper sulfate (CS) has been used widely despite its toxic effect. To get around this long-standing problem, copper nanoparticles (CuNPs) have been synthesized, characterized, and tested on mung bean plants along with commercially available salt CS, to observe morphological abnormalities enforced if any. CuNPs enhanced photosynthetic activity by modulating fluorescence emission, photophosphorylation, electron transport chain (ETC), and carbon assimilatory pathway under controlled laboratory conditions, as revealed from biochemical and biophysical studies on treated isolated mung bean chloroplast. CuNPs at the recommended dose worked better than CS in plants in terms of basic morphology, pigment contents, and antioxidative activities. CuNPs showed elevated nitrogen assimilation compared to CS. At higher doses CS was found to be toxic to the plant system, whereas CuNP did not impart any toxicity to the system including morphological and/or physiological alterations. This newly synthesized polymer-encapsulated CuNPs can be utilized as nutritional amendment to balance the nutritional disparity enforced by copper imbalance.
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Affiliation(s)
- Saheli Pradhan
- †Biological Sciences Division, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Prasun Patra
- §Centre for Research in Nanoscience and Nanotechnology, University of Calcutta, Kolkata 700098, India
| | - Shouvik Mitra
- †Biological Sciences Division, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Kushal Kumar Dey
- #Department of Statistics, University of Chicago, Chicago, Illinois 60637, United States
| | - Satakshi Basu
- †Biological Sciences Division, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Sourov Chandra
- †Biological Sciences Division, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Pratip Palit
- ⊥Plant Physiology Section, Central Research Institute for Jute and Allied Fibers, Indian Council of Agricultural Research, Barrackpore, Kolkata 700120, India
| | - Arunava Goswami
- †Biological Sciences Division, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
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Li F, Liang Z, Zheng X, Zhao W, Wu M, Wang Z. Toxicity of nano-TiO2 on algae and the site of reactive oxygen species production. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2015; 158:1-13. [PMID: 25461740 DOI: 10.1016/j.aquatox.2014.10.014] [Citation(s) in RCA: 182] [Impact Index Per Article: 20.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2014] [Revised: 10/15/2014] [Accepted: 10/21/2014] [Indexed: 06/04/2023]
Abstract
Given the extensive use of nanomaterials, they may enter aquatic environments and harm the growth of algae, which are primary producers in an aquatic ecosystem. Thus, the balance of an aquatic ecosystem may be destroyed. In this study, Karenia brevis and Skeletonema costatum were exposed to nano-TiO2 (anatase, average particle size of 5-10 nm, specific surface area of 210±10 m(2) g(-1)) to assess the effects of nano-TiO2 on algae. The findings of transmission electron microscopy-energy dispersive X-ray spectroscopy (TEM-EDX) and scanning electron microscopy (SEM) demonstrate aggregation of nano-TiO2 in the algal suspension. Nano-TiO2 was also found to be inside algal cells. The growth of the two species of algae was inhibited under nano-TiO2 exposure. The 72 h EC50 values of nano-TiO2 to K. brevis and S. costatum were 10.69 and 7.37 mg L(-1), respectively. TEM showed that the cell membrane of K. brevis was destroyed and its organelles were almost undistinguished under nano-TiO2 exposure. The malondialdehyde (MDA) contents of K. brevis and S. costatum significantly increased compared with those of the control (p<0.05). Meanwhile, superoxide dismutase (SOD) and catalase activities (CAT) of K. brevis and S. costatum changed in different ways. The reactive oxygen species (ROS) levels in both species were significantly higher than those of the control (p<0.05). The site of ROS production and accumulation in K. brevis and S. costatum under nano-TiO2 exposure was explored with the addition of inhibitors of different electron transfer chains. This study indicated that nano-TiO2 in algal suspensions inhibited the growth of K. brevis and S. costatum. This effect was attributed to oxidative stress caused by ROS production inside algal cells. The levels of anti-oxidative enzymes changed, which destroyed the balance between oxidation and anti-oxidation. Thus, algae were damaged by ROS accumulation, resulting in lipid oxidation and inhibited algae growth. The inhibitors of the electron transfer chain showed that the site of ROS production and accumulation in K. brevis cells was the chloroplast.
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Affiliation(s)
- Fengmin Li
- Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education, College of Environmental Science and Technology, Ocean University of China, Qingdao 266100, PR China.
| | - Zhi Liang
- Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education, College of Environmental Science and Technology, Ocean University of China, Qingdao 266100, PR China
| | - Xiang Zheng
- School of Environment and Natural Resources, Renmin University of China, Beijing 100872, China.
| | - Wei Zhao
- Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education, College of Environmental Science and Technology, Ocean University of China, Qingdao 266100, PR China
| | - Miao Wu
- Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education, College of Environmental Science and Technology, Ocean University of China, Qingdao 266100, PR China
| | - Zhenyu Wang
- Key Laboratory of Marine Environmental Science and Ecology, Ministry of Education, College of Environmental Science and Technology, Ocean University of China, Qingdao 266100, PR China
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Tiwari S, Tripathy BC, Jajoo A, Das AB, Murata N, Sane PV. Prasanna K. Mohanty (1934-2013): a great photosynthetiker and a wonderful human being who touched the hearts of many. PHOTOSYNTHESIS RESEARCH 2014; 122:235-260. [PMID: 25193504 DOI: 10.1007/s11120-014-0033-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2014] [Accepted: 08/15/2014] [Indexed: 06/03/2023]
Abstract
Prasanna K. Mohanty, a great scientist, a great teacher and above all a great human being, left us more than a year ago (on March 9, 2013). He was a pioneer in the field of photosynthesis research; his contributions are many and wide-ranging. In the words of Jack Myers, he would be a "photosynthetiker" par excellence. He remained deeply engaged with research almost to the end of his life; we believe that generations of researchers still to come will benefit from his thorough and enormous work. We present here his life and some of his contributions to the field of Photosynthesis Research. The response to this tribute was overwhelming and we have included most of the tributes, which we received from all over the world. Prasanna Mohanty was a pioneer in the field of "Light Regulation of Photosynthesis", a loving and dedicated teacher-unpretentious, idealistic, and an honest human being.
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Affiliation(s)
- Swati Tiwari
- School of Biotechnology, Jawaharlal Nehru University, New Delhi, 110067, India,
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18
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O'Carrigan A, Babla M, Wang F, Liu X, Mak M, Thomas R, Bellotti B, Chen ZH. Analysis of gas exchange, stomatal behaviour and micronutrients uncovers dynamic response and adaptation of tomato plants to monochromatic light treatments. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2014; 82:105-15. [PMID: 24935228 DOI: 10.1016/j.plaphy.2014.05.012] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Accepted: 05/22/2014] [Indexed: 05/02/2023]
Abstract
Light spectrum affects the yield and quality of greenhouse tomato, especially over a prolonged period of monochromatic light treatments. Physiological and chemical analysis was employed to investigate the influence of light spectral (blue, green and red) changes on growth, photosynthesis, stomatal behaviour, leaf pigment, and micronutrient levels. We found that plants are less affected under blue light treatment, which was evident by the maintenance of higher A, gs, Tr, and stomatal parameters and significantly lower VPD and Tleaf as compared to those plants grown in green and red light treatments. Green and red light treatments led to significantly larger increase in the accumulation of Fe, B, Zn, and Cu than blue light. Moreover, guard cell length, width, and volume all showed highly significant positive correlations to gs, Tr and negative links to VPD. There was negative impact of monochromatic lights-induced accumulation of Mn, Cu, and Zn on photosynthesis, leaf pigments and plant growth. Furthermore, most of the light-induced significant changes of the physiological traits were partially recovered at the end of experiment. A high degree of morphological and physiological plasticity to blue, green and red light treatments suggested that tomato plants may have developed mechanisms to adapt to the light treatments. Thus, understanding the optimization of light spectrum for photosynthesis and growth is one of the key components for greenhouse tomato production.
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Affiliation(s)
- Andrew O'Carrigan
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia
| | - Mohammad Babla
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia
| | - Feifei Wang
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia; School of Agricultural Science, University of Tasmania, Hobart, TAS, 7001, Australia
| | - Xiaohui Liu
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia; School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China
| | - Michelle Mak
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia
| | - Richard Thomas
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia
| | - Bill Bellotti
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia
| | - Zhong-Hua Chen
- School of Science and Health, University of Western Sydney, Penrith, 2751, NSW, Australia.
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Rai S, Agrawal C, Shrivastava AK, Singh PK, Rai LC. Comparative proteomics unveils cross species variations in Anabaena under salt stress. J Proteomics 2014; 98:254-70. [PMID: 24406298 DOI: 10.1016/j.jprot.2013.12.020] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2013] [Revised: 12/04/2013] [Accepted: 12/12/2013] [Indexed: 11/28/2022]
Abstract
UNLABELLED The present study compares protein diversity within three Anabaena species (Anabaena doliolum, Anabaena sp.PCC 7120 and Anabaena L31). 2-DE based analysis of 256 protein spots in control and 1, 3, 5, and 7days of salt treatment resulted into 96 proteins arching across fourteen functional categories were assigned to biochemical pathways using KOBAS 2.0. While 52.34% of the evaluated protein spots were common across three species, the remaining 47.66% fraction mainly comprised of the hypothetical and unknown proteins. PSORTb, CDD, Motifscan and Pfam revealed function and subcellular localization for 27 of the 31 hypothetical and unknown proteins. The differences in high salt tolerance (LC50) of A. doliolum over A. L31 was reflected by (i) many fold accumulation (as spot volumes) of Alr3090, Alr0803, peptidyl prolyl cis-trans isomerase and modulator of DNA gyrase proteins, and (ii) a better photosynthesis and energy homeostasis as indicated through photosystem activity, respiration, ATP and NADPH contents. Some common noteworthy salt effects include (i) photosystem damage, (ii) DNA damage repair, (iii) upregulated protein synthesis, (iv) enhanced sulphur metabolism, and (v) upregulated pentose phosphate pathway. 34 of the identified protein spots are novel entries to the Anabaena salt proteome. This study reveals the existence of separate strategies even within species to combat stress. BIOLOGICAL SIGNIFICANCE This study for the first time enumerates protein diversity in three Anabaena species employing their presence/absence and relative abundance. Proteomics integrated with physiology and bioinformatics deciphers differential salt tolerance among the studied species and is the first of its kind to predict the function of hypothetical and unknown proteins. Salt-induced proteomic alterations clearly demonstrate significant metabolic shifts and existence of separate molecular phenome among the species investigated. This may be responsible for niche specificity limiting their application as biofertilizer. Of the 96 identified proteins, a large chunk are new entries to the Anabaena salt proteome while some protein genes may be used as potential candidates for engineering salt tolerant cyanobacteria.
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Affiliation(s)
- Snigdha Rai
- Molecular Biology Section, Laboratory of Algal Biology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Chhavi Agrawal
- Molecular Biology Section, Laboratory of Algal Biology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Alok Kumar Shrivastava
- Molecular Biology Section, Laboratory of Algal Biology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - Prashant Kumar Singh
- Molecular Biology Section, Laboratory of Algal Biology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
| | - L C Rai
- Molecular Biology Section, Laboratory of Algal Biology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India.
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Agrawal C, Sen S, Singh S, Rai S, Singh PK, Singh VK, Rai L. Comparative proteomics reveals association of early accumulated proteins in conferring butachlor tolerance in three N2-fixing Anabaena spp. J Proteomics 2014; 96:271-90. [DOI: 10.1016/j.jprot.2013.11.015] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2013] [Revised: 11/11/2013] [Accepted: 11/15/2013] [Indexed: 12/13/2022]
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21
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Pradhan S, Patra P, Das S, Chandra S, Mitra S, Dey KK, Akbar S, Palit P, Goswami A. Photochemical modulation of biosafe manganese nanoparticles on Vigna radiata: a detailed molecular, biochemical, and biophysical study. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2013; 47:13122-31. [PMID: 24144189 DOI: 10.1021/es402659t] [Citation(s) in RCA: 106] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Manganese (Mn) is an essential element for plants which intervenes mainly in photosynthesis. In this study we establish that manganese nanoparticles (MnNP) work as a better micronutrient than commercially available manganese salt, MnSO4 (MS) at recommended doses on leguminous plant mung bean (Vigna radiata) under laboratory condition. At higher doses it does not impart toxicity to the plant unlike MS. MnNP-treated chloroplasts show greater photophosphorylation, oxygen evolution with respect to control and MS-treated chloroplasts as determined by biophysical and biochemical techniques. Water splitting by an oxygen evolving complex is enhanced by MnNP in isolated chloroplast as confirmed by polarographic and spectroscopic techniques. Enhanced activity of the CP43 protein of a photosystem II (PS II) Mn4Ca complex influenced better phosphorylation in the electron transport chain in the case of MnNP-treated chloroplast, which is evaluated by sodium dodecyl sulfate polyacrylamide gel electrophoresis and corresponding Western blot analysis. To the best of our knowledge this is the first report to augment photosynthesis using MnNP and its detailed correlation with different molecular, biochemical and biophysical parameters of photosynthetic pathways. At effective dosage, MnNP is found to be biosafe both in plant and animal model systems. Therefore MnNP would be a novel potential nanomodulator of photochemistry in the agricultural sector.
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Affiliation(s)
- Saheli Pradhan
- Biological Sciences Division, Indian Statistical Institute , 203 B.T. Road, Kolkata 700108, India
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22
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Rai S, Singh S, Shrivastava AK, Rai LC. Salt and UV-B induced changes in Anabaena PCC 7120: physiological, proteomic and bioinformatic perspectives. PHOTOSYNTHESIS RESEARCH 2013; 118:105-114. [PMID: 24113924 DOI: 10.1007/s11120-013-9931-1] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2013] [Accepted: 09/23/2013] [Indexed: 06/02/2023]
Abstract
This study examines response of Anabaena sp. PCC 7120 to salt and UV-B stress by combining physiological, biochemical, proteomics and bioinformatics approaches. Sixty five significantly altered protein spots corresponding to 51 protein genes identified using MALDI-TOF MS/MS were divided into nine functional categories. Based on relative abundance, these proteins were grouped into four major sets. Of these, 27 and 5 proteins were up- and downregulated, respectively, both under salt and UV-B while 8 and 11 proteins showed accumulation in salt and UV-B applied singly. Some responses common to salt and UV-B included (i) enhanced expression of FeSOD, alr3090 and accumulation of MDA indicating oxidative stress, (ii) accumulation of PDH, G6P isomerase, FBPaldolase, TK, GAPDH and PGK suggesting enhanced glycolysis, (iii) upregulation of 6-PGD, 6PGL and NADPH levels signifying operation of pentose phosphate pathway, (iv) upregulation of Dps, NDK and alr3199 indicating DNA damage, and (v) accumulation of proteins of ribosome assembly, transcriptional and translational processing. In contrast, enhanced expression of RUBISCO, increased glycolate oxidase activity and ammonium content under salt signify the difference. Salt was found to be more damaging than UV-B probably due to a cumulative effect of ionic, osmotic and oxidative damage. A group of proteins having common expression represent decreased toxicity of salt and UV-B when applied in combination.
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Affiliation(s)
- Snigdha Rai
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi, 221005, India
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23
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Gomes MP, Duarte DM, Carneiro MMLC, Barreto LC, Carvalho M, Soares AM, Guilherme LRG, Garcia QS. Zinc tolerance modulation in Myracrodruon urundeuva plants. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2013; 67:1-6. [PMID: 23524298 DOI: 10.1016/j.plaphy.2013.02.018] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2012] [Accepted: 02/19/2013] [Indexed: 05/21/2023]
Abstract
We investigated Zn tolerance and related tolerance mechanisms of Myracrodruon urundeuva by evaluating the growth (biomass production, pigment content, and photosynthetic activity) and antioxidant systems (redox potential and antioxidant enzyme activities) of seedlings exposed to increasing Zn doses. Plants were grown for 120 days in substrates with 0, 50, 80, 120 and 200 mg Zn kg(-1) and demonstrated Zn-tolerance. Zn doses greater than 80 mg Zn kg(-1) were phytotoxic but not lethal, and Zn toxicity under these conditions was imposed by oxidative stress caused by hydrogen peroxide (H2O2) accumulation and related lipid peroxidation. Zn tolerance in M. urundeuva is linked to the activity of antioxidant systems in their leaves that are modulated by that metal: both superoxide dismutase (SOD) and catalase (CAT) were always higher in the presence of Zn; lower Zn doses stimulated ascorbate peroxidase (APX) and glutathione reductase (GR) activities, but enzyme activity was inhibited at high doses; APX appeared to be the main peroxidase in H2O2 scavenging as stimulated guaiacol peroxidase (GPX) activity was not sufficient to avoid H2O2 accumulation at higher Zn doses; the modulation of APX and GR activities was linked to changes in the redox status of leaves.
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Affiliation(s)
- M P Gomes
- Université du Québec à Montréal, Institut des Sciences de l'environnement, Succ. Centre-Ville, C.P. 8888, H3C 3P8 Montréal, Québec, Canada; Universidade Federal de Lavras, Departamento de Biologia, Campus UFLA, C.P. 3037, 37200-000 Lavras, MG, Brazil.
| | - D M Duarte
- Universidade Federal de Minas Gerais, Departamento de Botânica, C.P. 486, 31270-970 Belo Horizonte, MG, Brazil
| | - M M L C Carneiro
- Universidade Federal de Lavras, Departamento de Biologia, Campus UFLA, C.P. 3037, 37200-000 Lavras, MG, Brazil
| | - L C Barreto
- Universidade Federal de Minas Gerais, Departamento de Botânica, C.P. 486, 31270-970 Belo Horizonte, MG, Brazil
| | - M Carvalho
- Universidade Federal de Lavras, Departamento de Biologia, Campus UFLA, C.P. 3037, 37200-000 Lavras, MG, Brazil
| | - A M Soares
- Universidade Federal de Lavras, Departamento de Biologia, Campus UFLA, C.P. 3037, 37200-000 Lavras, MG, Brazil
| | - L R G Guilherme
- Universidade Federal de Lavras, Departamento de Ciência do Solo, Campus UFLA, 37200-000 Lavras, MG, Brazil
| | - Q S Garcia
- Universidade Federal de Minas Gerais, Departamento de Botânica, C.P. 486, 31270-970 Belo Horizonte, MG, Brazil
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Prakash JSS, Tiwari S. Prasanna Mohanty (1934–2013): a pioneer and a loving teacher. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS 2013; 19:301-305. [PMCID: PMC3656183 DOI: 10.1007/s12298-013-0183-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Affiliation(s)
- J. S. S. Prakash
- />Department of Biotechnology and Bioinformatics, University of Hyderabad, Hyderabad, 500 046 India
| | - Swati Tiwari
- />School of Biotechnology, Jawaharlal Nehru University, New Delhi, 110067 India
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26
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Biswal AK, Pattanayak GK, Pandey SS, Leelavathi S, Reddy VS, Govindjee, Tripathy BC. Light intensity-dependent modulation of chlorophyll b biosynthesis and photosynthesis by overexpression of chlorophyllide a oxygenase in tobacco. PLANT PHYSIOLOGY 2012; 159:433-49. [PMID: 22419827 PMCID: PMC3375976 DOI: 10.1104/pp.112.195859] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2012] [Accepted: 03/13/2012] [Indexed: 05/19/2023]
Abstract
Chlorophyll b is synthesized by the oxidation of a methyl group on the B ring of a tetrapyrrole molecule to a formyl group by chlorophyllide a oxygenase (CAO). The full-length CAO from Arabidopsis (Arabidopsis thaliana) was overexpressed in tobacco (Nicotiana tabacum) that grows well at light intensities much higher than those tolerated by Arabidopsis. This resulted in an increased synthesis of glutamate semialdehyde, 5-aminolevulinic acid, magnesium-porphyrins, and chlorophylls. Overexpression of CAO resulted in increased chlorophyll b synthesis and a decreased chlorophyll a/b ratio in low light-grown as well as high light-grown tobacco plants; this effect, however, was more pronounced in high light. The increased potential of the protochlorophyllide oxidoreductase activity and chlorophyll biosynthesis compensated for the usual loss of chlorophylls in high light. Increased chlorophyll b synthesis in CAO-overexpressed plants was accompanied not only by an increased abundance of light-harvesting chlorophyll proteins but also of other proteins of the electron transport chain, which led to an increase in the capture of light as well as enhanced (40%-80%) electron transport rates of photosystems I and II at both limiting and saturating light intensities. Although the quantum yield of carbon dioxide fixation remained unchanged, the light-saturated photosynthetic carbon assimilation, starch content, and dry matter accumulation increased in CAO-overexpressed plants grown in both low- and high-light regimes. These results demonstrate that controlled up-regulation of chlorophyll b biosynthesis comodulates the expression of several thylakoid membrane proteins that increase both the antenna size and the electron transport rates and enhance carbon dioxide assimilation, starch content, and dry matter accumulation.
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Affiliation(s)
| | | | - Shiv S. Pandey
- School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India (A.K.B., G.K.P., S.S.P., G., B.C.T.); International Center for Genetic Engineering and Biotechnology, New Delhi 110067, India (S.L., V.S.R.); and Department of Plant Biology, Department of Biochemistry and Center of Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (G.)
| | - Sadhu Leelavathi
- School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India (A.K.B., G.K.P., S.S.P., G., B.C.T.); International Center for Genetic Engineering and Biotechnology, New Delhi 110067, India (S.L., V.S.R.); and Department of Plant Biology, Department of Biochemistry and Center of Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (G.)
| | - Vanga S. Reddy
- School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India (A.K.B., G.K.P., S.S.P., G., B.C.T.); International Center for Genetic Engineering and Biotechnology, New Delhi 110067, India (S.L., V.S.R.); and Department of Plant Biology, Department of Biochemistry and Center of Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (G.)
| | - Govindjee
- School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India (A.K.B., G.K.P., S.S.P., G., B.C.T.); International Center for Genetic Engineering and Biotechnology, New Delhi 110067, India (S.L., V.S.R.); and Department of Plant Biology, Department of Biochemistry and Center of Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (G.)
| | - Baishnab C. Tripathy
- School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India (A.K.B., G.K.P., S.S.P., G., B.C.T.); International Center for Genetic Engineering and Biotechnology, New Delhi 110067, India (S.L., V.S.R.); and Department of Plant Biology, Department of Biochemistry and Center of Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801 (G.)
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Pandey S, Rai R, Rai LC. Proteomics combines morphological, physiological and biochemical attributes to unravel the survival strategy of Anabaena sp. PCC7120 under arsenic stress. J Proteomics 2011; 75:921-37. [PMID: 22057044 DOI: 10.1016/j.jprot.2011.10.011] [Citation(s) in RCA: 119] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2011] [Revised: 09/13/2011] [Accepted: 10/17/2011] [Indexed: 11/30/2022]
Abstract
Proteomics in conjunction with morphological, physiological and biochemical variables has been employed for the first time to unravel survival strategies of the diazotrophic cyanobacterium Anabaena sp. PCC7120 under Arsenic (As) stress. Significant reduction in growth, carbon fixation, nitrogenase activity and chlorophyll content after 1 day (1d) and recovery after 15 days (15d) of As exposure indicates the acclimation of the test organism against As stress. The formation of akinete like structures is a novel observation never reported before in Anabaena sp. PCC7120. Proteomic characterization using 2-DE showed average 537, 422 and 439 spots in control, 1 and 15d treatment respectively. MALDI-TOF and LC-MS of As-treated Anabaena revealed a total of 45 differentially expressed proteins, of which 13 were novel (hypothetical) ones. Down-regulation of phosphoglycerate kinase (PGK), fructose bisphosphate aldolase II (FBA II), fructose 1,6 bisphosphatase (FBPase), transketolase (TK), and ATP synthase on day 1 and their significant recovery on the 15th day presumably maintained the glycolysis, pentose phosphate pathway (PPP) and turnover rate of Calvin cycle, hence survival of the test organism. Up-regulation of catalase (CAT), peroxiredoxin (Prx), thioredoxin (Trx) and oxidoreductase appears to protect the cells from oxidative stress. Appreciable induction in phytochelatin content (2.4 fold), GST activity (2.3 fold), and transcripts of phytochelatin synthase (5.0 fold), arsenate reductase (8.5 fold) and arsenite efflux genes - asr1102 (5.0 fold), alr1097 (4.7 fold) reiterates their role in As sequestration and shielding of the organism from As toxicity. While up-regulated metabolic and antioxidative defense proteins, phytochelatin and GST work synchronously, the ars genes play a central role in detoxification and survival of Anabaena under As stress. The proposed hypothetical model explains the interaction of metabolic proteins associated with the survival of Anabaena sp. PCC7120 under As stress.
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Affiliation(s)
- Sarita Pandey
- Molecular Biology Section, Laboratory of Algal Biology, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi-221005, India
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Gaziyev A, Aliyeva S, Kurbanova I, Ganiyeva R, Bayramova S, Gasanov R. Molecular operation of metals into the function and state of photosystem II. Metallomics 2011; 3:1362-7. [PMID: 21968941 DOI: 10.1039/c1mt00100k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Action sites of different metals in the electron transport reactions of Photosystem II (PS II) evaluated by delayed fluorescence in the ms range (ms DF) and pigment-pigment, pigment-protein and protein-protein interaction states by electrophoretic measurements are presented. The main targets for the metals action were shown to be:(i) Cd(2+), Ni(2+), Co(2+)-Y(z) or CaMn(4)-cluster on the donor site with dependence on pH;(ii) Ni(2+), Co(2+), Zn(2+), Al(3+), Mn(2+) between Q(A) and Q(B) on the acceptor site; effect of Al(3+) and Mn(2+) is observed only in acidic pH. Investigated metals bring about monomerization of oligomeric and dimeric chlorophyll-protein complexes (CPC) and destabilization of protein-protein interactions. Molecular mechanisms of metals interference with the structure of PS II are discussed.
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Effects of salicylic acid on protein kinase activity and chloroplast D1 protein degradation in wheat leaves subjected to heat and high light stress. ACTA ACUST UNITED AC 2011. [DOI: 10.1016/j.chnaes.2011.06.006] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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The extrinsic proteins of Photosystem II. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2011; 1817:121-42. [PMID: 21801710 DOI: 10.1016/j.bbabio.2011.07.006] [Citation(s) in RCA: 190] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2011] [Revised: 07/11/2011] [Accepted: 07/12/2011] [Indexed: 02/08/2023]
Abstract
In this review we examine the structure and function of the extrinsic proteins of Photosystem II. These proteins include PsbO, present in all oxygenic organisms, the PsbP and PsbQ proteins, which are found in higher plants and eukaryotic algae, and the PsbU, PsbV, CyanoQ, and CyanoP proteins, which are found in the cyanobacteria. These proteins serve to optimize oxygen evolution at physiological calcium and chloride concentrations. They also shield the Mn(4)CaO(5) cluster from exogenous reductants. Numerous biochemical, genetic and structural studies have been used to probe the structure and function of these proteins within the photosystem. We will discuss the most recent proposed functional roles for these components, their structures (as deduced from biochemical and X-ray crystallographic studies) and the locations of their proposed binding domains within the Photosystem II complex. This article is part of a Special Issue entitled: Photosystem II.
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Agarwal B. A role for anions in ATP synthesis and its molecular mechanistic interpretation. J Bioenerg Biomembr 2011; 43:299-310. [PMID: 21647635 DOI: 10.1007/s10863-011-9358-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2010] [Accepted: 04/28/2011] [Indexed: 01/26/2023]
Abstract
ATP, the 'universal biological energy currency', is synthesized by utilizing energy either from oxidation of fuels or from light, via the process of oxidative and photo-phosphorylation respectively. The process is mediated by the enzyme F(1)F(0)-ATP synthase, using the free energy of ion gradients in the final energy catalyzing step, i.e., the synthesis of ATP from ADP and inorganic phosphate (P(i)). The details of the molecular mechanism of ATP synthesis are among the most important fundamental issues in biology and hence need to be properly understood. In this work, a role for anions in making ATP has been found. New experimental data has been reported on the inhibition of ATP synthesis at nanomolar concentrations by the potent, specific anion channel blockers 4,4'-diisothiocyanostilbene-2, 2'-disulphonic acid (DIDS) and tributyltin chloride (TBTCl). Based on these inhibition studies, attention has been drawn to anion translocation (in addition to proton translocation) as a requirement for ATP synthesis. The type of inhibition has been quantified and an overall kinetic scheme for mixed inhibition that explains the data has been evolved. The experimental data and the type of inhibition found have been interpreted in the light of the torsional mechanism of energy transduction and ATP synthesis (Nath J Bioenerg Biomembr 42:293-300, 2010a; J Bioenerg Biomembr 42:301-309, 2010b). This detailed and unified mechanism resolves long-standing problems and inconsistencies in the first theories (Slater Nature 172:975-978, 1953; Williams J Theor Biol 1:1-17, 1961; Mitchell Nature 191:144-148, 1961; Mitchell Biol Rev 41:445-502, 1966), makes several novel predictions that are experimentally verifiable (Nath Biophys J 90:8-21, 2006a; Process Biochem 41:2218-2235, 2006b), and provides us with a new and fruitful paradigm in bioenergetics. The interpretation presented here provides intelligent answers to the unexplained existing results in the literature. It is shown that mechanistic interpretation of the experimental data requires substantial addition to available conceptual foundations such that present concepts, theories, and mechanisms must be revised.
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Affiliation(s)
- Bhawana Agarwal
- Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology, Delhi, Hauz Khas, New Delhi, 110 016, India.
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Kumari N, Narayan OP, Rai LC. Understanding butachlor toxicity in Aulosira fertilissima using physiological, biochemical and proteomic approaches. CHEMOSPHERE 2009; 77:1501-1507. [PMID: 19879624 DOI: 10.1016/j.chemosphere.2009.10.005] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2009] [Revised: 09/24/2009] [Accepted: 10/02/2009] [Indexed: 05/28/2023]
Abstract
The present study examines butachlor-induced inhibition of growth, photosynthetic pigments such as chlorophyll a, phycocyanin, allophycocyanin, phycoerythrin, photosystems I and II, whole chain electron transport, oxygen evolution, carbon fixation, ATP content, total thiol and glutathione contents of Aulosira fertilissima. For ascertaining if above mentioned changes are due to disturbance in plasma membrane integrity or proteins, fatty acid profiling and proteomics were done. Gas chromatographic (GC) analysis of fatty acid methyl esters (FAME) depicted a decrease in alpha-linolenic acid (C18:3) which appears responsible for plasma membrane instability. Enhanced lipid peroxidation and electrolyte leakage further attested the butachlor-induced cell damage. Butachlor-treated Aulosira exhibited significant and reproducible alternations in eight proteins as assessed by 2DE and LC-MS analysis of which phycocyanin alpha-chain, allophycocyanin beta-chain, C-phycocyanin alpha-subunit, ATP synthase beta-chain and FBP aldolase were associated with photosynthesis and respiration, peroxiredoxin with antioxidative defense system and GroES and NusB with protein folding and transcription termination respectively. However, a prolonged (15 d) butachlor treatment of Aulosira downregulated all the proteins except NusB. Reverse transcription PCR of the protein genes affirmed that aforesaid proteins were the gene products not artifacts. Downregulated GroES and over expressed NusB are critical proteins for cell death.
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Affiliation(s)
- Nidhi Kumari
- Molecular Biology Section, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221 005, India
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Kaznina NM, Titov AF, Laidinen GF, Talanov AV. Setaria Viridis tolerance of high zinc concentrations. BIOL BULL+ 2009. [DOI: 10.1134/s1062359009060053] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Wang C, Zhang SH, Wang PF, Hou J, Zhang WJ, Li W, Lin ZP. The effect of excess Zn on mineral nutrition and antioxidative response in rapeseed seedlings. CHEMOSPHERE 2009; 75:1468-1476. [PMID: 19328518 DOI: 10.1016/j.chemosphere.2009.02.033] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2008] [Revised: 02/09/2009] [Accepted: 02/11/2009] [Indexed: 05/27/2023]
Abstract
Zinc (Zn) is a necessary element for plants, but excess Zn can be detrimental. To investigate Zn toxicity, rapeseed (Brassica napus) seedlings were treated with 0.07-1.12 mM Zn for 7d. Inhibition of plant growth along with root damage, chlorosis and decreased chlorophyll (a and b) content in newly expanded leaves (the second and third leaves formed following cotyledons) were found under Zn stress. The Zn content increased in plants under external Zn stress, while concentrations of phosphorus, copper, iron, manganese and magnesium reduced significantly, especially in roots. Meanwhile, increased lipid peroxidation was detected biochemically and histochemically. Compared with controls, NADH oxidase and peroxidase (POD) activity increased in leaves and roots of plants under high Zn, but superoxide dismutase (SOD), catalase and ascorbate peroxidase activities decreased. The changes in glutathione S-transferase activity and in ascorbic acid, dehydroascorbate, non-protein thiols and glutathione contents were also measured under Zn stress. Isoforms of SOD and POD were separated using non-denaturing polyacrylamide gel electrophoresis and their activities were analyzed. Our results suggested that excess Zn exerts its toxicity partially through disturbing nutrient balance and inducing oxidative stress in plants. These data will be helpful for better understanding of toxicity of Zn and the adaptive mechanism in Zn non-hyperaccumulator plants.
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Affiliation(s)
- Chao Wang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environmental Science and Engineering, Hohai University, Nanjing 210098, China
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Mishra Y, Chaurasia N, Rai LC. Heat pretreatment alleviates UV-B toxicity in the cyanobacterium Anabaena doliolum: A proteomic analysis of cross tolerance. Photochem Photobiol 2008; 85:824-33. [PMID: 19076303 DOI: 10.1111/j.1751-1097.2008.00469.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
This study offers proteomic elucidation of heat pretreatment-induced alleviation of UV-B toxicity in Anabaena doliolum. Heat-pretreated cells exposed to UV-B showed improved activity of PSI, PSII, whole chain, (14)C fixation, ATP and NADPH contents compared to UV-B alone. Proteomic analysis using two-dimensional gel electrophoresis (2-DE), MALDI-TOF MS/MS and reverse transcription polymerase chain reaction (RT-PCR) of UV-B and heat pretreatment followed by UV-B-treated cells exhibited significant and reproducible alterations in nine proteins homologous to phycocyanin-alpha-chain (PC-alpha-chain), phycoerythrocyanin-alpha-chain (PEC-alpha-chain), hypothetical protein alr0882, phycobilisome core component (PBS-CC), iron superoxide dismutase (Fe-SOD), fructose-1,6-bisphosphate aldolase (FBA), nucleoside diphosphate kinase (NDPK), phosphoribulokinase (PRK) and ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCo) large chain. Except the PEC-alpha-chain, hypothetical protein alr0882 and PBS-CC, all other proteins showed upregulation at low doses of UV-B (U2) and significant downregulation at higher doses of UV-B (U5). The disruption of redox status, signaling, pentose phosphate pathway and Calvin cycle appears to be due to the downregulation of Fe-SOD, NDPK, FBA, PRK and RuBisCo thereby leading to the death of Anabaena. In contrast to this, the upregulation of all the above proteins in heat-pretreated cells, harboring different heat shock proteins (HSPs) like 60, 26 and 16.6, followed by UV-B treatment than only the UV-B-treated ones suggests a protective role of HSPs in mitigating UV-B toxicity.
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Affiliation(s)
- Yogesh Mishra
- Center of Advanced Study in Botany, Banaras Hindu University, Varanasi, India
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The new unified theory of ATP synthesis/hydrolysis and muscle contraction, its manifold fundamental consequences and mechanistic implications and its applications in health and disease. Int J Mol Sci 2008; 9:1784-1840. [PMID: 19325832 PMCID: PMC2635747 DOI: 10.3390/ijms9091784] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2008] [Revised: 08/18/2008] [Accepted: 09/02/2008] [Indexed: 11/17/2022] Open
Abstract
Complete details of the thermodynamics and molecular mechanisms of ATP synthesis/hydrolysis and muscle contraction are offered from the standpoint of the torsional mechanism of energy transduction and ATP synthesis and the rotation-uncoiling-tilt (RUT) energy storage mechanism of muscle contraction. The manifold fundamental consequences and mechanistic implications of the unified theory for oxidative phosphorylation and muscle contraction are explained. The consistency of current mechanisms of ATP synthesis and muscle contraction with experiment is assessed, and the novel insights of the unified theory are shown to take us beyond the binding change mechanism, the chemiosmotic theory and the lever arm model. It is shown from first principles how previous theories of ATP synthesis and muscle contraction violate both the first and second laws of thermodynamics, necessitating their revision. It is concluded that the new paradigm, ten years after making its first appearance, is now perfectly poised to replace the older theories. Finally, applications of the unified theory in cell life and cell death are outlined and prospects for future research are explored. While it is impossible to cover each and every specific aspect of the above, an attempt has been made here to address all the pertinent details and what is presented should be sufficient to convince the reader of the novelty, originality, breakthrough nature and power of the unified theory, its manifold fundamental consequences and mechanistic implications, and its applications in health and disease.
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Bhargava P, Mishra Y, Srivastava AK, Narayan OP, Rai LC. Excess copper induces anoxygenic photosynthesis in Anabaena doliolum: a homology based proteomic assessment of its survival strategy. PHOTOSYNTHESIS RESEARCH 2008; 96:61-74. [PMID: 18165907 DOI: 10.1007/s11120-007-9285-7] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2007] [Accepted: 12/17/2007] [Indexed: 05/25/2023]
Abstract
This study is the first to demonstrate operation of anoxygenic photosynthesis in copper acclimated Anabaena doliolum and to offer proteomic comparison with the control cells. The Cu-treated control strain showed a negative correlation in growth and intracellular Cu, partial inhibition of O(2)-evolution, PS II, PS I, whole chain, chlorophyll absorption, and nitrogenase activity. However, the acclimated strain growing in 250-fold excess Cu exhibited near normal growth, ATP content, PS I activity, carbon fixation, and almost complete inhibition of O(2)-evolution, PS II and chlorophyll absorption, but increased nitrogenase activity as compared to control. Proteomic decoding of the survival strategy of Cu-treated control and the acclimated strain using two-dimensional gel electrophoresis and MALDI-TOF MS analysis of proteins displaying significant and reproducible changes demonstrated involvement of transketolase, phycoerythrocyanin alpha-chain, iron superoxide dismutase (Fe-SOD), hypothetical protein alr 0803, manganese superoxide dismutase (Mn-SOD), phosphoribulokinase, and plastocyanin (PLC). Expression pattern of these proteins was attested at the transcriptional level using RT-PCR. Time course analysis of proteins of Cu-treated control strain revealed almost no change in PLC level, and a minor accumulation of transketolase, phycoerythrocyanin alpha-chain and both isoforms of SOD after 7 and recovery after 10 days. Acclimated strain under excess Cu, however, exhibited significant accumulation of both isoforms of SOD, plastocyanin, phosphoribulokinase and transketolase, which seem to counteract oxidative damage, serve as an alternate electron carrier from cytochrome b6/f complex to photosystem I and meet the NADPH and ATP requirements, respectively, under anoxygenic photosynthesis. In view of the kinetics of the hypothetical protein alr0803 (no change in expression level for 7, maximum after 10 and decline after 15 days) its involvement in metal homeostasis is suggested.
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Affiliation(s)
- Poonam Bhargava
- Molecular Biology Section, Laboratory of Algal Biology, Center of Advanced Study in Botany, Banaras Hindu University, Varanasi 221005, India
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Tripathy BC, Mohapatra A, Gupta I. Impairment of the photosynthetic apparatus by oxidative stress induced by photosensitization reaction of protoporphyrin IX. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2007; 1767:860-8. [PMID: 17459329 DOI: 10.1016/j.bbabio.2007.03.008] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2006] [Revised: 03/12/2007] [Accepted: 03/13/2007] [Indexed: 11/19/2022]
Abstract
Treatment with the herbicide acifluorfen-sodium (AF-Na), an inhibitor of protoporphyrinogen oxidase, caused an accumulation of protoporphyrin IX (Proto IX) , light-induced necrotic spots on the cucumber cotyledon within 12-24 h, and photobleaching after 48-72 h of light exposure. Proto IX-sensitized and singlet oxygen ((1)O(2))-mediated oxidative stress caused by AF-Na treatment impaired photosystem I (PSI), photosystem II (PSII) and whole chain electron transport reactions. As compared to controls, the F(v)/F(m) (variable to maximal chlorophyll a fluorescence) ratio of treated samples was reduced. The PSII electron donor NH(2)OH failed to restore the F(v)/F(m) ratio suggesting that the reduction of F(v)/F(m) reflects the loss of reaction center functions. This explanation is further supported by the practically near-similar loss of PSI and PSII activities. As revealed from the light saturation curve (rate of oxygen evolution as a function of light intensity), the reduction of PSII activity was both due to the reduction in the quantum yield at limiting light intensities and impairment of light-saturated electron transport. In treated cotyledons both the Q (due to recombination of Q(A)(-) with S(2)) and B (due to recombination of Q(B)(-) with S(2)/S(3)) band of thermoluminescence decreased by 50% suggesting a loss of active PSII reaction centers. In both the control and treated samples, the thermoluminescence yield of B band exhibited a periodicity of 4 suggesting normal functioning of the S states in centers that were still active. The low temperature (77 K) fluorescence emission spectra revealed that the F(695) band (that originates in CP-47) increased probably due to reduced energy transfer from the CP47 to the reaction center. These demonstrated an overall damage to the PSI and PSII reaction centers by (1)O(2) produced in response to photosensitization reaction of protoporphyrin IX in AF-Na-treated cucumber seedlings.
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Affiliation(s)
- Baishnab C Tripathy
- School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India.
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Lu YK, Theg SM, Stemler AJ. Carbonic anhydrase activity of the photosystem II OEC33 protein from pea. PLANT & CELL PHYSIOLOGY 2005; 46:1944-53. [PMID: 16223737 DOI: 10.1093/pcp/pci209] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
The purpose of this study was to identify the location of one of the two sources of carbonic anhydrase (CA) activity associated with the PSII complex in chloroplast membranes. We tested the hypothesis that the extrinsic 33 kDa protein, OEC33, associated with the oxygen-evolving complex (OEC), is one source of CA activity. We found that precursor OEC33 expressed in Escherichia coli exhibits CA activity, but the expressed precursors of OEC24 or OEC17 do not. The CA activity of OEC33 remained after treatment at 90 degrees C for 15 min. Additional biochemical evidence supports the hypothesis. Only those wash treatments that remove the OEC33 from PSII also remove CA activity. Both immunoblot and CA activity show that the CA tracks the OEC33, in parallel, when PSII undergoes washing at different CaCl2 concentrations. The OEC33 protein purified by HiTrap Q anion exchange chromatography has CA activity that is inhibited by an antibody against OEC33. PSII membranes washed with 1 M CaCl2 to remove OEC33 can be reconstituted either with extracted, purified, OEC33 or with the E. coli-expressed precursor OEC33. Reconstitution partially restores both oxygen evolution and CA activity. For maximal CA activity, OEC33 requires manganese as a cofactor.
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Affiliation(s)
- Yih-Kuang Lu
- Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ 85287, USA
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Sood S, Gupta V, Tripathy BC. Photoregulation of the greening process of wheat seedlings grown in red light*. PLANT MOLECULAR BIOLOGY 2005; 59:269-87. [PMID: 16247557 DOI: 10.1007/s11103-005-8880-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2005] [Accepted: 06/16/2005] [Indexed: 05/05/2023]
Abstract
Wheat seedling grown with their shoot bottom exposed to red light (400 micromol m(-2) s(-1)) either with constant illumination or light-dark cycles did not accumulate chlorophyll. This near-etiolation response was manifested by a critical threshold intensity of red light and did not need continuous illumination. The inhibition of the greening process resulted from reduced synthesis of glutamate-1-semialdehyde and consequent reduction in tetrapyrrole precursor 5-aminolevulinic acid. Red light perceived by the shoot bottom down regulated the protein and/or gene expression of enzymes involved in the biosynthesis of tetrapyrroles. The contents of endogenous cytokinins, i.e., isopentenyl-adenosine and dihydrozeatinriboside, were reduced in seedlings grown in red light having their shoot bottom exposed. Application of exogenous cytokinin and its analogue to roots of seedlings grown in red light reversed the down regulation of the greening process. The reversal of red-light-induced near-etiolation morphogenesis by far-red (200 micromol m(-2) s(-1)) or blue (25 mumol m(-2) s(-1)) light suggests that it could be a very high red-irradiance response of phytochrome, in the meristematic layers of the shoot bottom, that works in concert with blue light receptor(s).
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Affiliation(s)
- Suchi Sood
- School of Life Sciences, Jawaharlal Nehru University, 110067, New Delhi, India
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Sood S, Tyagi AK, Tripathy BC. Inhibition of Photosystem I and Photosystem II in Wheat Seedlings with their Root-shoot Transition Zones Exposed to Red Light. PHOTOSYNTHESIS RESEARCH 2004; 81:31-40. [PMID: 16328845 DOI: 10.1023/b:pres.0000028337.72340.3a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The present study was conducted to observe the role of the root-shoot transition zone in the development of PS I and PS II in red light. The development of PS II and PS I was severely inhibited when root-shoot transition zones of wheat seedlings were exposed to red light (670 nm) of intensity 500 micromol m(-2) s(-1). Chlorophyll biosynthesis was also inhibited in these seedlings. Most of the PS I and PS II proteins (D1, LHCPII, CP47, OEC33) and their transcript levels were severely inhibited but cyt b6f complex proteins were only partially inhibited. Protein and transcript levels of Rubisco large subunit and protochlorophyllide (Pchlide) biosynthesis were also severely inhibited in these seedlings. When incubated in the dark with or without the precursor of chlorophyll biosynthesis ALA, these plants accumulated most of the Pchlide, as non-phototransformable Pchlide, suggesting low activity of NADPH:protochlorophyllide oxidoreductase (EC 1.6.99.1) in these plants. These effects were not observed when the seedlings were grown in red light with their root-shoot transition zones covered. These results suggest that the root-shoot transition zone plays an important role in the overall greening process involving transcription and translation of photosynthetic genes.
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Affiliation(s)
- Suchi Sood
- School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
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Raghavendra AS, Vishnu Sane P, Mohanty P. Photosynthesis research in India: transition from yield physiology into molecular biology. PHOTOSYNTHESIS RESEARCH 2003; 76:435-50. [PMID: 16228599 DOI: 10.1023/a:1024934432008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Photosynthesis research in India can be traced back several thousand years, with the mention of the Sun energizing the plants, which form food for all living creatures on the earth (from the Mahabharata, the great epic, ca. 2600 B.C.) and the report of Sage Parasara (ca. 100 B.C.) on the ability of plants to make their own food, due to their pigments. With the pioneering studies by Sir Jagdish Chandra Bose, work on photosynthesis proceeded steadily during the first half of the 20th century. Some of the classic reports during this period are: malate metabolism in Hydrilla, spectrophotometric estimation of chlorophylls, importance of spectral quality for photosynthesis - an indication of two photosystems, photoinactivation of photosynthesis, and importance of flag leaf photosynthesis to grain yield. After the 1960s, there was a burst of research in the areas of physiology and biochemistry of carbon assimilation and photochemistry. A significant transition occurred, before the beginning of new millennium, into the area of molecular biology of chloroplasts, regulation of photosynthesis and stress tolerance. Future research work in India is geared to focus on the following aspects of photosynthesis: elucidation/analysis of genes, molecular biology/evolution of enzymes, development/use of transgenics and modeling.
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Affiliation(s)
- Agepati S Raghavendra
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India, ;
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Zeng FL, Zhang MF, Zhou SM, Wu JG, Deng RW. The effect of lanthanide chloride on abscisic acid and electron-transport activity of some crops. Biol Trace Elem Res 1999; 67:277-84. [PMID: 10201334 DOI: 10.1007/bf02784427] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
The abscisic acid (ABA) content of the root tips of four crops grown in lanthanide chloride solution and their root lengths had been determined. At lanthanide concentrations of 5 and 10 ppm, these crops all grew well and the ABA decreased. At higher lanthanide concentrations (100-500 ppm), the ABA is increased again. At these concentrations of lanthanum chloride, the photosystems I and II (PSI and PSII) and whole electron chain transport activities were inhibited. PSII was more sensitive than PSI, and it is concluded that La3+ acts on the diphenylcarbazide (DPC) action place of PSII oxidizing site.
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Affiliation(s)
- F L Zeng
- Department of Biology, Lanzhou University, China
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Jin X, Nalewajko C, Kushner DJ. Comparative study of nickel toxicity to growth and photosynthesis in nickel-resistant and -sensitive strains of Scenedesmus acutus f. alternans (Chlorophyceae). MICROBIAL ECOLOGY 1996; 31:103-114. [PMID: 24185640 DOI: 10.1007/bf00175079] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/1995] [Revised: 05/19/1995] [Indexed: 05/28/2023]
Abstract
Nickel (Ni) toxicity to growth and photosynthesis was studied in four strains of Scenedesmus acutus f. alternans. Effects of Ni dosage and duration of exposure on growth and photosynthesis were strain specific. Large differences in responses of both growth and photosynthesis to Ni were detected between three resistant strains (B4, Cu-Tol, and Ni-Tol) and one sensitive strain (UTEX 72). Growth of UTEX 72 was ≥ 18 times more sensitive to Ni than those of the three resistant strains. The order of Ni dosages (fmol Ni/pg cell dry weight) causing 50% inhibition (D150) of growth rates in the four strains was Ni-Tol (10.5) > B4 (8.19) > Cu-Tol (4.60) > UTEX 72 (0.25). The effect of Ni dosage on photosynthetic rate as percentage of control corresponded to a saturation curve and was a strong function of duration of exposure. The DI50s of photosynthetic rates were ≥3.5 times lower in UTEX 72 than in the three resistant strains, and in all four strains they decreased sharply with the increase in duration of exposure. The order of the four strains in DI50s of photosynthetic rate was B4 (58.2) > Cu-Tol (38.0) > Ni-Tol (28.9) > UTEX 72 (8.24) for 6-h exposure and Ni-Tol (2.88) > Cu-Tol (1.30) > B4 (1.01) > UTEX 72 (0.15) for 24-h exposure. The DI50s of photosynthetic rate for 6-h exposure were higher than those of growth rate in all four strains, and for 24-h exposure they were lower, except in UTEX 72. Thus, the relative Ni sensitivity of growth and photosynthesis of the four strains depends on the duration of exposure. The results of factorial analysis of variance suggested that Ni toxicity to photosynthesis is a consequence of a strong interaction among strain, Ni dosage, and duration of exposure.
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Affiliation(s)
- X Jin
- Department of Botany, University of Toronto, M5S 3B2, Toronto, Ontario, Canada
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Loranger C, Carpentier R. A fast bioassay for phytotoxicity measurements using immobilized photosynthetic membranes. Biotechnol Bioeng 1994; 44:178-83. [DOI: 10.1002/bit.260440206] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Moubarak-Milad M, Stemler A. Oxidation-reduction potential dependence of photosystem II carbonic anhydrase in maize thylakoids. Biochemistry 1994; 33:4432-8. [PMID: 8155662 DOI: 10.1021/bi00180a042] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
In characterizing the carbonic anhydrase (CA) found in maize thylakoid membranes, it was observed that the enzyme's activity was inhibited somewhat when the Hill oxidant, ferricyanide, was given in the dark [Stemler, A. (1986) Biochim. Biophys. Acta 850, 97-107]. In the present work, a redox titration of this effect shows that the CA activity is mediated by a component that has a midpoint potential (Em) of about 485 mV at pH 6.5 and a pH dependence of 60 mV/pH. These redox titration characteristics are identical to those of the redox mediator "D480", which modulates formate and bicarbonate binding affinity to photosystem II (PS II). Bicarbonate binds to PS II more readily, and CA activity is higher, when D480 is reduced, whereas both bicarbonate binding and thylakoid-bound CA activity are low when D480 is oxidized in the dark by ferricyanide. Both the low bicarbonate binding affinity and the low CA activity induced by the presence of ferricyanide are reversed by a single saturating flash of light. In contrast, the activity of soluble CA, which is extracted from maize mesophyll cytosol, does not exhibit any redox dependence in the range 400-550 mV. Furthermore, thylakoid-bound CA activity is inhibited by 5 mM ZnCl2 by as much as 75%, whereas the activity of soluble CA shows no significant decrease induced by ZnCl2. Also, at a medium potential of 400 mV, ferricyanide (1 mM) inhibits soluble CA activity by 88% and thylakoid-bound CA activity by only 18%. It is concluded from these results that CA activity observed in thylakoids arises from CA inherent to PS II and is not some form of contamination by soluble CA. Possible roles of CA in PS II reaction mechanisms are discussed.
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Tajmir-Riahi H, Ahmed A. Complexation of copper and zinc ions with proteins of a light-harvesting complex (LHC-II) of chloroplast thylakoid membranes studied by FT-IR spectroscopy. J Mol Struct 1993. [DOI: 10.1016/0022-2860(93)80164-q] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Kim CS, Jung J. THE SUSCEPTIBILITY OF MUNG BEAN CHLOROPLASTS TO PHOTOINHIBITION IS INCREASED BY AN EXCESS SUPPLY OF IRON TO PLANTS: A PHOTOBIOLOGICAL ASPECT OF IRON TOXICITY IN PLANT LEAVES. Photochem Photobiol 1993. [DOI: 10.1111/j.1751-1097.1993.tb04912.x] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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