Geisterfer ZM, Oakey J, Gatlin JC. Microfluidic encapsulation of
Xenopus laevis cell-free extracts using hydrogel photolithography.
STAR Protoc 2020;
1:100221. [PMID:
33377113 PMCID:
PMC7757658 DOI:
10.1016/j.xpro.2020.100221]
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Abstract
Cell-free extract derived from the eggs of the African clawed frog Xenopus laevis is a well-established model system that has been used historically in bulk aliquots. Here, we describe a microfluidic approach for isolating discrete, biologically relevant volumes of cell-free extract, with more expansive and precise control of extract shape compared with extract-oil emulsions. This approach is useful for investigating the mechanics of intracellular processes affected by cell geometry or cytoplasmic volume, including organelle scaling and positioning mechanisms.
For complete details on the use and execution of this protocol, please refer to Geisterfer et al. (2020).
Xenopus laevis cell-free extracts can be isolated as discreet volumes typical of cells
Approach provides enhanced control over the shape and position of encapsulated extract
Improved signal-to-noise during fluorescence imaging versus oil-emulsion extract droplets
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