Automatic A-Phase Detection of Cyclic Alternating Patterns in Sleep Using Dynamic Temporal Information

The dynamics of cyclic-periodic phenomena during non-rapid and rapid eye movement sleep

Sleep is a complex physiological state characterized by distinct stages, each exhibiting unique electroencephalographic patterns and physiological phenomena. Sleep research has unveiled the presence of intricate cyclic-periodic phenomena during both non-rapid eye movement and rapid eye movement sleep stages. These phenomena encompass a spectrum of rhythmic oscillations and periodic events, including cyclic alternating pattern, periodic leg movements during sleep, respiratory-related events such as apneas, and heart rate variability. This narrative review synthesizes empirical findings and theoretical frameworks to elucidate the dynamics, interplay and implications of cyclic-periodic phenomena within the context of sleep physiology. Furthermore, it invokes the clinical relevance of these phenomena in the diagnosis and management of sleep disorders.

Preliminary evidence of transcutaneous vagus nerve stimulation effects on sleep in veterans with post-traumatic stress disorder

Sleep problems are common among veterans with post-traumatic stress disorder and closely associated with hyperarousal symptoms. Transcutaneous vagus nerve stimulation (tVNS) may have potential to improve sleep quality in veterans with PTSD through effects on brain systems relevant to hyperarousal and sleep-wake regulation. The current pilot study examines the effect of 1 h of tVNS administered at "lights out" on sleep architecture, microstructure, and autonomic activity. Thirteen veterans with PTSD completed two nights of laboratory-based polysomnography during which they received 1 h of either active tVNS (tragus) or sham stimulation (earlobe) at "lights out" with randomised order. Sleep staging and stability metrics were derived from polysomnography data. Autonomic activity during sleep was assessed using the Porges-Bohrer method for calculating respiratory sinus arrhythmia (RSAP-B ). Paired t-tests revealed a small decrease in the total sleep time (d = -0.31), increase in N3 sleep (d = 0.23), and a small-to-moderate decrease in REM sleep (d = -0.48) on nights of active tVNS relative to sham stimulation. tVNS was also associated with a moderate reduction in cyclic alternating pattern (CAP) rate (d = -0.65) and small-to-moderate increase in RSAP-B during NREM sleep. Greater NREM RSAP-B was associated with a reduced CAP rate and NREM alpha power. This pilot study provides preliminary evidence that tVNS may improve sleep depth and stability in veterans with PTSD, as well as increase parasympathetically mediated nocturnal autonomic activity. These results warrant continued investigation into tVNS as a potential tool for treating sleep disturbance in veterans with PTSD.

Transvenous phrenic nerve stimulation for treating central sleep apnea may regulate sleep microstructure

STUDY OBJECTIVES

To assess the impact of transvenous phrenic nerve stimulation (TPNS) on non-rapid eye movement sleep microstructure quantified by cyclic alternating pattern (CAP) in individuals with central sleep apnea (CSA).

METHODS

We analyzed baseline and 6-month follow-up overnight polysomnograms (PSG) in 134 CSA patients enrolled in the remedē System Pivotal Trial implanted with TPNS randomized (1:1) to neurostimulation (treatment group) or no stimulation (control group). Differences in CAP rate, A1 index, and A2+A3 index between study arms at follow-up were assessed using Analysis of Covariance adjusted for baseline values.

RESULTS

On follow-up PSG, the treatment group showed a decrease in the frequency of A2+A3 phases compared to controls (-5.86 ± 11.82 vs. 0.67 ± 15.25, p = 0.006), while the frequency of A1 phases increased more in the treatment group (2.57 ± 11.67 vs. -2.47 ± 10.60, p = 0.011). The change in CAP rate at follow-up was comparable between study arms.

CONCLUSIONS

TPNS treatment for central sleep apnea may affect sleep microstructure. Brief phases of rapid cortical activity appear to be replaced by short phases of slower cortical activity, which may promote sleep continuity. Further investigations are warranted to elucidate the mechanisms underlying the effect of TPNS on CAP.

L-SeqSleepNet: Whole-cycle Long Sequence Modeling for Automatic Sleep Staging

Human sleep is cyclical with a period of approximately 90 minutes, implying long temporal dependency in the sleep data. Yet, exploring this long-term dependency when developing sleep staging models has remained untouched. In this work, we show that while encoding the logic of a whole sleep cycle is crucial to improve sleep staging performance, the sequential modelling approach in existing state-of-the-art deep learning models are inefficient for that purpose. We thus introduce a method for efficient long sequence modelling and propose a new deep learning model, L-SeqSleepNet, which takes into account whole-cycle sleep information for sleep staging. Evaluating L-SeqSleepNet on four distinct databases of various sizes, we demonstrate state-of-the-art performance obtained by the model over three different EEG setups, including scalp EEG in conventional Polysomnography (PSG), in-ear EEG, and around-the-ear EEG (cEEGrid), even with a single EEG channel input. Our analyses also show that L-SeqSleepNet is able to alleviate the predominance of N2 sleep (the major class in terms of classification) to bring down errors in other sleep stages. Moreover the network becomes much more robust, meaning that for all subjects where the baseline method had exceptionally poor performance, their performance are improved significantly. Finally, the computation time only grows at a sub-linear rate when the sequence length increases.

Sleep electroencephalography biomarkers of cognition in obstructive sleep apnea

Obstructive sleep apnea has been associated with cognitive impairment and may be linked to disorders of cognitive function. These associations may be a result of intermittent hypoxaemia, sleep fragmentation and changes in sleep microstructure in obstructive sleep apnea. Current clinical metrics of obstructive sleep apnea, such as the apnea-hypopnea index, are poor predictors of cognitive outcomes in obstructive sleep apnea. Sleep microstructure features, which can be identified on sleep electroencephalography of traditional overnight polysomnography, are increasingly being characterized in obstructive sleep apnea and may better predict cognitive outcomes. Here, we summarize the literature on several major sleep electroencephalography features (slow-wave activity, sleep spindles, K-complexes, cyclic alternating patterns, rapid eye movement sleep quantitative electroencephalography, odds ratio product) identified in obstructive sleep apnea. We will review the associations between these sleep electroencephalography features and cognition in obstructive sleep apnea, and examine how treatment of obstructive sleep apnea affects these associations. Lastly, evolving technologies in sleep electroencephalography analyses will also be discussed (e.g. high-density electroencephalography, machine learning) as potential predictors of cognitive function in obstructive sleep apnea.

Deep-Learning-Based Classification of Cyclic-Alternating-Pattern Sleep Phases

Determining the cyclic-alternating-pattern (CAP) phases in sleep using electroencephalography (EEG) signals is crucial for assessing sleep quality. However, most current methods for CAP classification primarily rely on classical machine learning techniques, with limited implementation of deep-learning-based tools. Furthermore, these methods often require manual feature extraction. Herein, we propose a fully automatic deep-learning-based algorithm that leverages convolutional neural network architectures to classify the EEG signals via their time-frequency representations. Through our investigation, we explored using time-frequency analysis techniques and found that Wigner-based representations outperform the commonly used short-time Fourier transform for CAP classification. Additionally, our algorithm incorporates contextual information of the EEG signals and employs data augmentation techniques specifically designed to preserve the time-frequency structure. The model is developed using EEG signals of healthy subjects from the publicly available CAP sleep database (CAPSLPDB) on Physionet. An experimental study demonstrates that our algorithm surpasses existing machine-learning-based methods, achieving an accuracy of 77.5% on a balanced test set and 81.8% when evaluated on an unbalanced test set. Notably, the proposed algorithm exhibits efficiency and scalability, making it suitable for on-device implementation to enhance CAP identification procedures.

Reviewing methods of deep learning for diagnosing COVID-19, its variants and synergistic medicine combinations

The COVID-19 pandemic has necessitated the development of reliable diagnostic methods for accurately detecting the novel coronavirus and its variants. Deep learning (DL) techniques have shown promising potential as screening tools for COVID-19 detection. In this study, we explore the realistic development of DL-driven COVID-19 detection methods and focus on the fully automatic framework using available resources, which can effectively investigate various coronavirus variants through modalities. We conducted an exploration and comparison of several diagnostic techniques that are widely used and globally validated for the detection of COVID-19. Furthermore, we explore review-based studies that provide detailed information on synergistic medicine combinations for the treatment of COVID-19. We recommend DL methods that effectively reduce time, cost, and complexity, providing valuable guidance for utilizing available synergistic combinations in clinical and research settings. This study also highlights the implication of innovative diagnostic technical and instrumental strategies, exploring public datasets, and investigating synergistic medicines using optimised DL rules. By summarizing these findings, we aim to assist future researchers in their endeavours by providing a comprehensive overview of the implication of DL techniques in COVID-19 detection and treatment. Integrating DL methods with various diagnostic approaches holds great promise in improving the accuracy and efficiency of COVID-19 diagnostics, thus contributing to effective control and management of the ongoing pandemic.

Towards automatic EEG cyclic alternating pattern analysis: a systematic review

This study conducted a systematic review to determine the feasibility of automatic Cyclic Alternating Pattern (CAP) analysis. Specifically, this review followed the 2020 Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines to address the formulated research question: is automatic CAP analysis viable for clinical application? From the identified 1,280 articles, the review included 35 studies that proposed various methods for examining CAP, including the classification of A phase, their subtypes, or the CAP cycles. Three main trends were observed over time regarding A phase classification, starting with mathematical models or features classified with a tuned threshold, followed by using conventional machine learning models and, recently, deep learning models. Regarding the CAP cycle detection, it was observed that most studies employed a finite state machine to implement the CAP scoring rules, which depended on an initial A phase classifier, stressing the importance of developing suitable A phase detection models. The assessment of A-phase subtypes has proven challenging due to various approaches used in the state-of-the-art for their detection, ranging from multiclass models to creating a model for each subtype. The review provided a positive answer to the main research question, concluding that automatic CAP analysis can be reliably performed. The main recommended research agenda involves validating the proposed methodologies on larger datasets, including more subjects with sleep-related disorders, and providing the source code for independent confirmation.

Subject-level Normalization to Improve A-phase Detection of Cyclic Alternating Pattern in Sleep EEG

Automatic detection systems for activation phases (A-phase) of the cyclic alternating pattern (CAP) in electroencephalograms (EEG) are designed to automatically score A-phases in any individual but typically fail to factor in EEG signal variations between individuals, e.g. due to sleep disorders, recording site differences or equipment differences. Here, we investigate the effect of subject-level normalization on the performance of an automatic A-phase detection system consisting of a recurrent neural network. We compared the classification performance of various subject-level normalization methods to the standard training set normalization. Systems were trained and tested on subjects with different sleep disorders using the publicly available CAP Sleep Database on Physionet. Subject-level normalization using Zscore or median and interquartile range (IQR) increases the F1-score for A1-phases by +11-22% (Z-Score: +11-20%, Median/IQR: +16-22%), for A2-phases by +2-9% (Z-Score: +59%, Median/IQR: +2-7%), for A3-phases by -1 - +8% (Z-Score: +3-8%, Median/IQR: -1-+5%) as compared to the standard training data normalization when tested across sleep disorders. Our results show that subject-level normalization drastically improves the precision of A-phase detection in case the training population differs from the testing population.Clinical Relevance- Subject-level normalisation improves the automatic CAP scoring system performances for the general population by minimizing the effect of individual EEG differences.

Investigation of the Common Independent Component Analysis Approaches in Biological Signals for Removing Cardiac Field Artefact from EEG

Electroencephalography (EEG) signals are often impacted by the cardiac field artefact (CFA), which can compromise EEG analysis. Independent component analysis (ICA) has proven effective in removing such artefacts, including CFA. This paper examines three well-known ICA algorithms commonly utilized in EEG signal processing and assesses their ability to decompose EEG into independent components (ICs) to remove CFA. The paper also investigates whether a new two-level ICA approach can improve performance. Results are evaluated using a synthetic dataset of 10 subjects.

Computerized detection of cyclic alternating patterns of sleep: A new paradigm, future scope and challenges

BACKGROUND AND OBJECTIVES

Sleep quality is associated with wellness, and its assessment can help diagnose several disorders and diseases. Sleep analysis is commonly performed based on self-rating indices, sleep duration, environmental factors, physiologically and polysomnographic-derived parameters, and the occurrence of disorders. However, the correlation that has been observed between the subjective assessment and objective measurements of sleep quality is small. Recently, a few automated systems have been suugested to measure sleep quality to address this challenge. Sleep quality can be assessed by evaluating macrostructure-based sleep analysis via the examination of sleep cycles, namely Rapid Eye Movement (REM) and Non Rapid Eye Movement (NREM) with N1, N2, and N3 stages. However, macrostructure sleep analysis does not consider transitory phenomena like K-complexes and transient fluctuations, which are indispensable in diagnosing various sleep disorders. The CAP, part of the microstructure of sleep, may offer a more precise and relevant examination of sleep and can be considered one of the candidates to measure sleep quality and identify sleep disorders such as insomnia and apnea. CAP is characterized by very subtle changes in the brain's electroencephalogram (EEG) signals that occur during the NREM stage of sleep. The variations among these patterns in healthy subjects and subjects with sleep disorders can be used to identify sleep disorders. Studying CAP is highly arduous for human experts; thus, developing automated systems for assessing CAP is gaining momentum. Developing new techniques for automated CAP detection installed in clinical setups is essential. This paper aims to analyze the algorithms and methods presented in the literature for the automatic assessment of CAP and the development of CAP-based sleep markers that may enhance sleep quality assessment, helping diagnose sleep disorders.

METHODS

This literature survey examined the automated assessment of CAP and related parameters. We have reviewed 34 research articles, including fourteen ML, nine DL, and ten based on some other techniques.

RESULTS

The review includes various algorithms, databases, features, classifiers, and classification performances and their comparisons, advantages, and limitations of automated systems for CAP assessment.

CONCLUSION

A detailed description of state-of-the-art research findings on automated CAP assessment and associated challenges has been presented. Also, the research gaps have been identified based on our review. Further, future research directions are suggested for sleep quality assessment using CAP.

Association between psychotropic medication and sleep microstructure: evidence from large population studies

STUDY OBJECTIVES

To assess the association between psychotropic medications and sleep microstructure in large community-based cohorts of older people.

METHODS

We analyzed overnight polysomnograms of 381 women from the Study of Osteoporotic Fractures (SOF) and 2,657 men from the Osteoporotic Fractures in Men Sleep Study (MrOS), who either used no psychotropic medication (n = 2,819), only benzodiazepines (n = 112), or only selective serotonin reuptake inhibitors (SSRI) (n = 107). Sleep microstructure (cyclic alternating pattern, CAP) was compared between the no medication group and psychotropic medication groups using the Mann-Whitney U test. Significant differences were investigated using multivariable linear regression adjusted for confounders.

RESULTS

CAP rate, arousal index, apnea-hypopnea index, and the frequency of slow, low-amplitude electroencephalography activation phases were significantly lower in MrOS participants using benzodiazepines than participants not taking psychotropic medication. SSRI users in MrOS experienced no altered sleep microstructure compared to those with no psychotropic use. SOF participants using benzodiazepines did not show similar associations with sleep microstructure. However, SSRI users from SOF had a significantly higher frequency of rapid, high-amplitude electroencephalography activation phases (A2 + 3) and periodic limb-movement index than participants not taking psychotropic medication. Multivariable linear regression adjusted for demographic, lifestyle, mood disorders, and health variables indicated additional significant associations between benzodiazepine usage and CAP rate and A2 + 3 index, respectively, in older men, and between CAP rate and SSRI usage in older women.

CONCLUSIONS

We identified significant associations between sleep microstructure and psychotropic drugs in MrOS and SOF, highlighting the importance of comprehensive sleep analysis, including CAP. Our results may improve understanding of the differences in sleep-wake mechanisms based on psychotropic usage.

CLINICAL TRIAL REGISTRATION

Registry: ClinicalTrials.gov; Title: Outcomes of Sleep Disorders in Older Men; Identifier: NCT00070681; URL: https://clinicaltrials.gov/ct2/show/record/NCT00070681.

CITATION

Hartmann S, Parrino L, Ensrud K, et al. Association between psychotropic medication and sleep microstructure: evidence from large population studies. J Clin Sleep Med. 2023;19(3):581-589.

A-phase index: an alternative view for sleep stability analysis based on automatic detection of the A-phases from the cyclic alternating pattern

STUDY OBJECTIVES

Sleep stability can be studied by evaluating the cyclic alternating pattern (CAP) in electroencephalogram (EEG) signals. The present study presents a novel approach for assessing sleep stability, developing an index based on the CAP A-phase characteristics to display a sleep stability profile for a whole night's sleep.

METHODS

Two ensemble classifiers were developed to automatically score the signals, one for "A-phase" and the other for "non-rapid eye movement" estimation. Both were based on three one-dimension convolutional neural networks. Six different inputs were produced from the EEG signal to feed the ensembles' classifiers. A proposed heuristic-oriented search algorithm individually tuned the classifiers' structures. The outputs of the two ensembles were combined to estimate the A-phase index (API). The models can also assess the A-phase subtypes, their API, and the CAP cycles and rate.

RESULTS

Four dataset variations were considered, examining healthy and sleep-disordered subjects. The A-phase average estimation's accuracy, sensitivity, and specificity range was 82%-87%, 72%-80%, and 82%-88%, respectively. A similar performance was attained for the A-phase subtype's assessments, with an accuracy range of 82%-88%. Furthermore, in the examined dataset's variations, the API metric's average error varied from 0.15 to 0.25 (with a median range of 0.11-0.24). These results were attained without manually removing wake or rapid eye movement periods, leading to a methodology suitable to produce a fully automatic CAP scoring algorithm.

CONCLUSIONS

Metrics based on API can be understood as a new view for CAP analysis, where the goal is to produce and examine a sleep stability profile.

L-Tetrolet Pattern-Based Sleep Stage Classification Model Using Balanced EEG Datasets

Background: Sleep stage classification is a crucial process for the diagnosis of sleep or sleep-related diseases. Currently, this process is based on manual electroencephalogram (EEG) analysis, which is resource-intensive and error-prone. Various machine learning models have been recommended to standardize and automate the analysis process to address these problems. Materials and methods: The well-known cyclic alternating pattern (CAP) sleep dataset is used to train and test an L-tetrolet pattern-based sleep stage classification model in this research. By using this dataset, the following three cases are created, and they are: Insomnia, Normal, and Fused cases. For each of these cases, the machine learning model is tasked with identifying six sleep stages. The model is structured in terms of feature generation, feature selection, and classification. Feature generation is established with a new L-tetrolet (Tetris letter) function and multiple pooling decomposition for level creation. We fuse ReliefF and iterative neighborhood component analysis (INCA) feature selection using a threshold value. The hybrid and iterative feature selectors are named threshold selection-based ReliefF and INCA (TSRFINCA). The selected features are classified using a cubic support vector machine. Results: The presented L-tetrolet pattern and TSRFINCA-based sleep stage classification model yield 95.43%, 91.05%, and 92.31% accuracies for Insomnia, Normal dataset, and Fused cases, respectively. Conclusion: The recommended L-tetrolet pattern and TSRFINCA-based model push the envelope of current knowledge engineering by accurately classifying sleep stages even in the presence of sleep disorders.

Multiple Time Series Fusion Based on LSTM: An Application to CAP A Phase Classification Using EEG

The Cyclic Alternating Pattern (CAP) is a periodic activity detected in the electroencephalogram (EEG) signals. This pattern was identified as a marker of unstable sleep with several possible clinical applications; however, there is a need to develop automatic methodologies to facilitate real-world applications based on CAP assessment. Therefore, a deep learning-based EEG channels' feature level fusion was proposed in this work and employed for the CAP A phase classification. Two optimization algorithms optimized the channel selection, fusion, and classification procedures. The developed methodologies were evaluated by fusing the information from multiple EEG channels for patients with nocturnal frontal lobe epilepsy and patients without neurological disorders. Results showed that both optimization algorithms selected a comparable structure with similar feature level fusion, consisting of three electroencephalogram channels (Fp2-F4, C4-A1, F4-C4), which is in line with the CAP protocol to ensure multiple channels' arousals for CAP detection. Moreover, the two optimized models reached an area under the receiver operating characteristic curve of 0.82, with average accuracy ranging from 77% to 79%, a result in the upper range of the specialist agreement and best state-of-the-art works, despite a challenging dataset. The proposed methodology also has the advantage of providing a fully automatic analysis without requiring any manual procedure. Ultimately, the models were revealed to be noise-resistant and resilient to multiple channel loss, being thus suitable for real-world application.

Heuristic Optimization of Deep and Shallow Classifiers: An Application for Electroencephalogram Cyclic Alternating Pattern Detection

Methodologies for automatic non-rapid eye movement and cyclic alternating pattern analysis were proposed to examine the signal from one electroencephalogram monopolar derivation for the A phase, cyclic alternating pattern cycles, and cyclic alternating pattern rate assessments. A population composed of subjects free of neurological disorders and subjects diagnosed with sleep-disordered breathing was studied. Parallel classifications were performed for non-rapid eye movement and A phase estimations, examining a one-dimension convolutional neural network (fed with the electroencephalogram signal), a long short-term memory (fed with the electroencephalogram signal or with proposed features), and a feed-forward neural network (fed with proposed features), along with a finite state machine for the cyclic alternating pattern cycle scoring. Two hyper-parameter tuning algorithms were developed to optimize the classifiers. The model with long short-term memory fed with proposed features was found to be the best, with accuracy and area under the receiver operating characteristic curve of 83% and 0.88, respectively, for the A phase classification, while for the non-rapid eye movement estimation, the results were 88% and 0.95, respectively. The cyclic alternating pattern cycle classification accuracy was 79% for the same model, while the cyclic alternating pattern rate percentage error was 22%.

Automatic Detection of the Cyclic Alternating Pattern of Sleep and Diagnosis of Sleep-Related Pathologies Based on Cardiopulmonary Resonance Indices

The cyclic alternating pattern is the periodic electroencephalogram activity occurring during non-rapid eye movement sleep. It is a marker of sleep instability and is correlated with several sleep-related pathologies. Considering the connection between the human heart and brain, our study explores the feasibility of using cardiopulmonary features to automatically detect the cyclic alternating pattern of sleep and hence diagnose sleep-related pathologies. By statistically analyzing and comparing the cardiopulmonary characteristics of a healthy group and groups with sleep-related diseases, an automatic recognition scheme of the cyclic alternating pattern is proposed based on the cardiopulmonary resonance indices. Using the Hidden Markov and Random Forest, the scheme combines the variation and stability of measurements of the coupling state of the cardiopulmonary system during sleep. In this research, the F1 score of the sleep-wake classification reaches 92.0%. In terms of the cyclic alternating pattern, the average recognition rate of A-phase reaches 84.7% on the CAP Sleep Database of 108 cases of people. The F1 score of disease diagnosis is 87.8% for insomnia and 90.0% for narcolepsy.

Causality of cortical and cardiovascular activity during cyclic alternating pattern in non-rapid eye movement sleep

The dynamic interplay between central and autonomic nervous system activities plays a pivotal role in orchestrating sleep. Macrostructural changes such as sleep-stage transitions or phasic, brief cortical events elicit fluctuations in neural outflow to the cardiovascular system, but the causal relationships between cortical and cardiovascular activities underpinning the microstructure of sleep are largely unknown. Here, we investigate cortical-cardiovascular interactions during the cyclic alternating pattern (CAP) of non-rapid eye movement sleep in a diverse set of overnight polysomnograms. We determine the Granger causality in both 507 CAP and 507 matched non-CAP sequences to assess the causal relationships between electroencephalography (EEG) frequency bands and respiratory and cardiovascular variables (heart period, respiratory period, pulse arrival time and pulse wave amplitude) during CAP. We observe a significantly stronger influence of delta activity on vascular variables during CAP sequences where slow, low-amplitude EEG activation phases (A1) dominate than during non-CAP sequences. We also show that rapid, high-amplitude EEG activation phases (A3) provoke a more pronounced change in autonomic activity than A1 and A2 phases. Our analysis provides the first evidence on the causal interplay between cortical and cardiovascular activities during CAP. Granger causality analysis may also be useful for probing the level of decoupling in sleep disorders. This article is part of the theme issue 'Advanced computation in cardiovascular physiology: new challenges and opportunities'.

Automatic Cyclic Alternating Pattern (CAP) analysis: Local and multi-trace approaches

The Cyclic Alternating Pattern (CAP) is composed of cycles of two different electroencephalographic features: an activation A-phase followed by a B-phase representing the background activity. CAP is considered a physiological marker of sleep instability. Despite its informative nature, the clinical applications remain limited as CAP analysis is a time-consuming activity. In order to overcome this limit, several automatic detection methods were recently developed. In this paper, two new dimensions were investigated in the attempt to optimize novel, efficient and automatic detection algorithms: 1) many electroencephalographic leads were compared to identify the best local performance, and 2) the global contribution of the concurrent detection across several derivations to CAP identification. The developed algorithms were tested on 41 polysomnographic recordings from normal (n = 8) and pathological (n = 33) subjects. In comparison with the visual CAP analysis as the gold standard, the performance of each algorithm was evaluated. Locally, the detection on the F4-C4 derivation showed the best performance in comparison with all other leads, providing practical suggestions of electrode montage when a lean and minimally invasive approach is preferable. A further improvement in the detection was achieved by a multi-trace method, the Global Analysis—Common Events, to be applied when several recording derivations are available. Moreover, CAP time and CAP rate obtained with these algorithms positively correlated with the ones identified by the scorer. These preliminary findings support efficient automated ways for the evaluation of the sleep instability, generalizable to both normal and pathological subjects affected by different sleep disorders.

Automatic Detection of K-Complexes Using the Cohen Class Recursiveness and Reallocation Method and Deep Neural Networks with EEG Signals

Evoked and spontaneous K-complexes are thought to be involved in sleep protection, but their role as biomarkers is still under debate. K-complexes have two major functions: first, they suppress cortical arousal in response to stimuli that the sleeping brain evaluates to avoid signaling danger; and second, they help strengthen memory. K-complexes also play an important role in the analysis of sleep quality, in the detection of diseases associated with sleep disorders, and as biomarkers for the detection of Alzheimer’s and Parkinson’s diseases. Detecting K-complexes is relatively difficult, as reliable methods of identifying this complex cannot be found in the literature. In this paper, we propose a new method for the automatic detection of K-complexes combining the method of recursion and reallocation of the Cohen class and the deep neural networks, obtaining a recursive strategy aimed at increasing the percentage of classification and reducing the computation time required to detect K-complexes by applying the proposed methods.

New and Emerging Approaches to Better Define Sleep Disruption and Its Consequences

Current approaches to quantify and diagnose sleep disorders and circadian rhythm disruption are imprecise, laborious, and often do not relate well to key clinical and health outcomes. Newer emerging approaches that aim to overcome the practical and technical constraints of current sleep metrics have considerable potential to better explain sleep disorder pathophysiology and thus to more precisely align diagnostic, treatment and management approaches to underlying pathology. These include more fine-grained and continuous EEG signal feature detection and novel oxygenation metrics to better encapsulate hypoxia duration, frequency, and magnitude readily possible via more advanced data acquisition and scoring algorithm approaches. Recent technological advances may also soon facilitate simple assessment of circadian rhythm physiology at home to enable sleep disorder diagnostics even for “non-circadian rhythm” sleep disorders, such as chronic insomnia and sleep apnea, which in many cases also include a circadian disruption component. Bringing these novel approaches into the clinic and the home settings should be a priority for the field. Modern sleep tracking technology can also further facilitate the transition of sleep diagnostics from the laboratory to the home, where environmental factors such as noise and light could usefully inform clinical decision-making. The “endpoint” of these new and emerging assessments will be better targeted therapies that directly address underlying sleep disorder pathophysiology via an individualized, precision medicine approach. This review outlines the current state-of-the-art in sleep and circadian monitoring and diagnostics and covers several new and emerging approaches to better define sleep disruption and its consequences.

Automated Characterization of Cyclic Alternating Pattern Using Wavelet-Based Features and Ensemble Learning Techniques with EEG Signals

Sleep is highly essential for maintaining metabolism of the body and mental balance for increased productivity and concentration. Often, sleep is analyzed using macrostructure sleep stages which alone cannot provide information about the functional structure and stability of sleep. The cyclic alternating pattern (CAP) is a physiological recurring electroencephalogram (EEG) activity occurring in the brain during sleep and captures microstructure of the sleep and can be used to identify sleep instability. The CAP can also be associated with various sleep-related pathologies, and can be useful in identifying various sleep disorders. Conventionally, sleep is analyzed using polysomnogram (PSG) in various sleep laboratories by trained physicians and medical practitioners. However, PSG-based manual sleep analysis by trained medical practitioners is onerous, tedious and unfavourable for patients. Hence, a computerized, simple and patient convenient system is highly desirable for monitoring and analysis of sleep. In this study, we have proposed a system for automated identification of CAP phase-A and phase-B. To accomplish the task, we have utilized the openly accessible CAP sleep database. The study is performed using two single-channel EEG modalities and their combination. The model is developed using EEG signals of healthy subjects as well as patients suffering from six different sleep disorders namely nocturnal frontal lobe epilepsy (NFLE), sleep-disordered breathing (SDB), narcolepsy, periodic leg movement disorder (PLM), insomnia and rapid eye movement behavior disorder (RBD) subjects. An optimal orthogonal wavelet filter bank is used to perform the wavelet decomposition and subsequently, entropy and Hjorth parameters are extracted from the decomposed coefficients. The extracted features have been applied to different machine learning algorithms. The best performance is obtained using ensemble of bagged tress (EBagT) classifier. The proposed method has obtained the average classification accuracy of 84%, 83%, 81%, 78%, 77%, 76% and 72% for NFLE, healthy, SDB, narcolepsy, PLM, insomnia and RBD subjects, respectively in discriminating phases A and B using a balanced database. Our developed model yielded an average accuracy of 78% when all 77 subjects including healthy and sleep disordered patients are considered. Our proposed system can assist the sleep specialists in an automated and efficient analysis of sleep using sleep microstructure.

Cyclic alternating pattern in children with obstructive sleep apnea and its relationship with adenotonsillectomy, behavior, cognition, and quality of life

STUDY OBJECTIVES

To determine in children with obstructive sleep apnea (OSA) the effect of adenotonsillectomy (AT) on the cyclic alternating pattern (CAP) and the relationship between CAP and behavioral, cognitive, and quality-of-life measures.

METHODS

CAP parameters were analyzed in 365 overnight polysomnographic recordings of children with mild-to-moderate OSA enrolled in the Childhood Adenotonsillectomy Trial (CHAT), randomized to either early AT (eAT) or watchful waiting with supportive care (WWSC). We also analyzed CAP in a subgroup of 72 children with moderate OSA (apnea-hypopnea index > 10) that were part of the CHAT sample. Causal mediation analysis was performed to determine the independent effect of changes in CAP on selected outcome measures.

RESULTS

At baseline, a higher number of A1 phases per hour of sleep was significantly associated with worse behavioral functioning (caregiver Behavior Rating Inventory of Executive Function (BRIEF) Global Executive Composite (GEC): ρ = 0.24, p = 0.042; caregiver Conners' Rating Scale Global Index: ρ = 0.25, p = 0.036) and lower quality of life (OSA-18: ρ = 0.27, p = 0.022; PedsQL: ρ = -0.29, p = 0.015) in the subgroup of children with moderate OSA, but not across the entire sample. At 7-months follow-up, changes in CAP parameters were comparable between the eAT and WWSC arms. CAP changes did not account for significant proportions of variations in behavioral, cognitive, and quality-of-life performance measures at follow-up.

CONCLUSIONS

We show a significant association between the frequency of slow, high-amplitude waves with behavioral functioning, as well as the quality of life in children with moderate OSA. Early AT in children with mild-to-moderate OSA does not alter the microstructure of nonrapid eye movement sleep compared with watchful waiting after an approximately 7-month period of follow-up.

CLINICAL TRIAL

The study "A Randomized Controlled Study of Adenotonsillectomy for Children With Obstructive Sleep Apnea Syndrome" was registered at Clinicaltrials.gov (#NCT00560859).

Characterization of cyclic alternating pattern during sleep in older men and women using large population studies

STUDY OBJECTIVES

To assess the microstructural architecture of non-rapid eye movement (NREM) sleep known as cyclic alternating pattern (CAP) in relation to the age, gender, self-reported sleep quality, and the degree of sleep disruption in large community-based cohort studies of older people.

METHODS

We applied a high-performance automated CAP detection system to characterize CAP in 2,811 men from the Osteoporotic Fractures in Men Sleep Study (MrOS) and 426 women from the Study of Osteoporotic Fractures (SOF). CAP was assessed with respect to age and gender and correlated to obstructive apnea-hypopnea index, arousal index (AI-NREM), and periodic limb movements in sleep index. Further, we evaluated CAP across levels of self-reported sleep quality measures using analysis of covariance.

RESULTS

Age was significantly associated with the number of CAP sequences during NREM sleep (MrOS: p = 0.013, SOF = 0.051). CAP correlated significantly with AI-NREM (MrOS: ρ = 0.30, SOF: ρ = 0.29). CAP rate, especially the A2+A3 index, was inversely related to self-reported quality of sleep, independent of age and sleep disturbance measures. Women experienced significantly fewer A1-phases compared to men, in particular, in slow-wave sleep (N3).

CONCLUSIONS

We demonstrate that automated CAP analysis of large-scale databases can lead to new findings on CAP and its subcomponents. We show that sleep disturbance indices are associated with the CAP rate. Further, the CAP rate is significantly linked to subjectively reported sleep quality, independent from traditionally scored markers of sleep fragmentation. Finally, men and women show differences in the microarchitecture of sleep as identified by CAP, despite similar macro-architecture.

Automatic Sleep-Stage Scoring in Healthy and Sleep Disorder Patients Using Optimal Wavelet Filter Bank Technique with EEG Signals

Sleep stage classification plays a pivotal role in effective diagnosis and treatment of sleep related disorders. Traditionally, sleep scoring is done manually by trained sleep scorers. The analysis of electroencephalogram (EEG) signals recorded during sleep by clinicians is tedious, time-consuming and prone to human errors. Therefore, it is clinically important to score sleep stages using machine learning techniques to get accurate diagnosis. Several studies have been proposed for automated detection of sleep stages. However, these studies have employed only healthy normal subjects (good sleepers). The proposed study focuses on the automated sleep-stage scoring of subjects suffering from seven different kind of sleep disorders such as insomnia, bruxism, narcolepsy, nocturnal frontal lobe epilepsy (NFLE), periodic leg movement (PLM), rapid eye movement (REM) behavioural disorder and sleep-disordered breathing as well as normal subjects. The open source physionet's cyclic alternating pattern (CAP) sleep database is used for this study. The EEG epochs are decomposed into sub-bands using a new class of optimized wavelet filters. Two EEG channels, namely F4-C4 and C4-A1, combined are used for this work as they can provide more insights into the changes in EEG signals during sleep. The norm features are computed from six sub-bands coefficients of optimal wavelet filter bank and fed to various supervised machine learning classifiers. We have obtained the highest classification performance using an ensemble of bagged tree (EBT) classifier with 10-fold cross validation. The CAP database comprising of 80 subjects is divided into ten different subsets and then ten different sleep-stage scoring tasks are performed. Since, the CAP database is unbalanced with different duration of sleep stages, the balanced dataset also has been created using over-sampling and under-sampling techniques. The highest average accuracy of 85.3% and Cohen's Kappa coefficient of 0.786 and accuracy of 92.8% and Cohen's Kappa coefficient of 0.915 are obtained for unbalanced and balanced databases, respectively. The proposed method can reliably classify the sleep stages using single or dual channel EEG epochs of 30 s duration instead of using multimodal polysomnography (PSG) which are generally used for sleep-stage scoring. Our developed automated system is ready to be tested with more sleep EEG data and can be employed in various sleep laboratories to evaluate the quality of sleep in various sleep disorder patients and normal subjects.

On the use of patterns obtained from LSTM and feature-based methods for time series analysis: application in automatic classification of the CAP A phase subtypes

The cyclic alternating pattern is a marker of sleep instability identified in the electroencephalogram signals whose sequence of transient variations compose the A phases. These phases are divided into three subtypes (A1, A2, and A3) according to the presented patterns. The traditional approach of manually scoring the cyclic alternating pattern events for the full night is unpractical, with a high probability of miss classification, due to the large quantity of information that is produced during a full night recording. To address this concern, automatic methodologies were proposed using a long short-term memory to perform the classification of one electroencephalogram monopolar derivation signal. The proposed model is composed of three classifiers, one for each subtype, performing binary classification in a one versus all procedure. Two methodologies were tested: feed the pre-processed electroencephalogram signal to the classifiers; create features from the pre-processed electroencephalogram signal which were fed to the classifiers (feature-based methods). It was verified that the A1 subtype classification performance was similar for both methods and the A2 subtype classification was higher for the feature-based methods. However, the A3 subtype classification was found to be the most challenging to be performed, and for this classification, the feature-based methods were superior. A characterization analysis was also performed using a recurrence quantification analysis to further examine the subtypes characteristics. The average accuracy and area under the receiver operating characteristic curve for the A1, A2, and A3 subtypes of the feature-based methods were respectively: 82% and 0.92; 80% and 0.88; 85% and 0.86.

Matrix of Lags: A tool for analysis of multiple dependent time series applied for CAP scoring

BACKGROUND

Multiple methods have been developed to assess what happens between and within time series. In a particular type of these series, the previous values of the currently observed series are contingent on the lagged values of another series. These cases can commonly be addressed by regression. However, a model selection criteria should be employed to evaluate the compromise between the amount of information provided and the model complexity. This is the basis for the development of the Matrix of Lags (MoL), a tool to study dependent time series.

METHODS

For each input, multiple regressions were applied to produce a model for each lag and a model selection criterion identifies the lags that will populate an auxiliary matrix. Afterwards, the energy of the lags (that are in the auxiliary matrix) was used to define a row of the MoL. Therefore, each input corresponds to a row of the MoL. To test the proposed tool, the heart rate variability and the electrocardiogram derived respiration were employed to perform the indirect estimation of the electroencephalography cyclic alternating pattern (CAP) cycles. Therefore, a support vector machine was fed with the MoL to perform the CAP cycle classification for each input signal. Multiple tests were carried out to further examine the proposed tool, including the effect of balancing the datasets, application of other regression methods and employment of two feature section models. The first was based on sequential backward selection while the second examined characteristics of a return map.

RESULTS

The best performance of the subject independent model was attained by feeding the lags, selected by sequential backward selection, to a support vector machine, achieving an average accuracy, sensitivity, specificity and area under the receiver operating characteristic curve of, respectively, 77%, 71%, 82% and 0.77.

CONCLUSIONS

The developed model allows to perform a measurement of a characteristic marker of sleep instability (the CAP cycle) and the results are in the upper bound of the specialist agreement range with visual analysis. Thus, the developed method could possibly be used for clinical diagnosis.

Automated phase classification in cyclic alternating patterns in sleep stages using Wigner-Ville Distribution based features

Sleep is one of the most important body mechanisms responsible for the proper functioning of human body. Cyclic alternating patterns (CAP) play an indispensable role in the analysis of sleep quality and related disorders like nocturnal front lobe epilepsy, insomnia, narcolepsy etc. The traditional manual segregation methods of CAP phases by the medical experts are prone to human fatigue and errors which may lead to inaccurate diagnosis of sleep stages. In this paper, we present an automated approach for the classification of CAP phases (A and B) using Wigner-Ville Distribution (WVD) and Rényi entropy (RE) features. The WVD provides a high-resolution time-frequency analysis of the signals whereas RE provides least time-frequency uncertainty with WVD. The classification is performed using medium Gaussian kernel-based support vector machine with 10-fold cross-validation technique. We have presented the results for randomly sampled balanced data sets. The proposed approach does not require any pre-processing or post-processing stages, making it simple as compared to the existing techniques. The proposed method is able to achieve an average classification accuracy of 72.35% and 87.45% for balanced and unbalanced data sets respectively. The proposed method can aid the medical experts to analyze the cerebral stability as well as the sleep quality of a person.

A Portable Wireless Device for Cyclic Alternating Pattern Estimation from an EEG Monopolar Derivation

Quality of sleep can be assessed by analyzing the cyclic alternating pattern, a long-lasting periodic activity that is composed of two alternate electroencephalogram patterns, which is considered to be a marker of sleep instability. Experts usually score this pattern through a visual examination of each one-second epoch of an electroencephalogram signal, a repetitive and time-consuming task that is prone to errors. To address these issues, a home monitoring device was developed for automatic scoring of the cyclic alternating pattern by analyzing the signal from one electroencephalogram derivation. Three classifiers, specifically, two recurrent networks (long short-term memory and gated recurrent unit) and one one-dimension convolutional neural network, were developed and tested to determine which was more suitable for the cyclic alternating pattern phase’s classification. It was verified that the network based on the long short-term memory attained the best results with an average accuracy, sensitivity, specificity and area under the receiver operating characteristic curve of, respectively, 76%, 75%, 77% and 0.752. The classified epochs were then fed to a finite state machine to determine the cyclic alternating pattern cycles and the performance metrics were 76%, 71%, 84% and 0.778, respectively. The performance achieved is in the higher bound of the experts’ expected agreement range and considerably higher than the inter-scorer agreement of multiple experts, implying the usability of the device developed for clinical analysis.