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Geris R, Malta M, Soares LA, de Souza Neta LC, Pereira NS, Soares M, Reis VDS, Pereira MDG. A Review about the Mycoremediation of Soil Impacted by War-like Activities: Challenges and Gaps. J Fungi (Basel) 2024; 10:94. [PMID: 38392767 PMCID: PMC10890077 DOI: 10.3390/jof10020094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 01/18/2024] [Accepted: 01/18/2024] [Indexed: 02/24/2024] Open
Abstract
(1) Background: The frequency and intensity of war-like activities (war, military training, and shooting ranges) worldwide cause soil pollution by metals, metalloids, explosives, radionuclides, and herbicides. Despite this environmentally worrying scenario, soil decontamination in former war zones almost always involves incineration. Nevertheless, this practice is expensive, and its efficiency is suitable only for organic pollutants. Therefore, treating soils polluted by wars requires efficient and economically viable alternatives. In this sense, this manuscript reviews the status and knowledge gaps of mycoremediation. (2) Methods: The literature review consisted of searches on ScienceDirect and Web of Science for articles (1980 to 2023) on the mycoremediation of soils containing pollutants derived from war-like activities. (3) Results: This review highlighted that mycoremediation has many successful applications for removing all pollutants of war-like activities. However, the mycoremediation of soils in former war zones and those impacted by military training and shooting ranges is still very incipient, with most applications emphasizing explosives. (4) Conclusion: The mycoremediation of soils from conflict zones is an entirely open field of research, and the main challenge is to optimize experimental conditions on a field scale.
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Affiliation(s)
- Regina Geris
- Institute of Chemistry, Federal University of Bahia, Barão de Jeremoabo Street, s/n, Campus Ondina, 40170-115 Salvador, BA, Brazil
| | - Marcos Malta
- Institute of Chemistry, Federal University of Bahia, Barão de Jeremoabo Street, s/n, Campus Ondina, 40170-115 Salvador, BA, Brazil
| | - Luar Aguiar Soares
- Department of Exact and Earth Sciences, Bahia State University, Silveira Martins Street, N. 2555, Cabula, 41150-000 Salvador, BA, Brazil
| | - Lourdes Cardoso de Souza Neta
- Department of Exact and Earth Sciences, Bahia State University, Silveira Martins Street, N. 2555, Cabula, 41150-000 Salvador, BA, Brazil
| | - Natan Silva Pereira
- Department of Exact and Earth Sciences, Bahia State University, Silveira Martins Street, N. 2555, Cabula, 41150-000 Salvador, BA, Brazil
| | - Miguel Soares
- Institute of Chemistry, Federal University of Bahia, Barão de Jeremoabo Street, s/n, Campus Ondina, 40170-115 Salvador, BA, Brazil
| | - Vanessa da Silva Reis
- Department of Exact and Earth Sciences, Bahia State University, Silveira Martins Street, N. 2555, Cabula, 41150-000 Salvador, BA, Brazil
| | - Madson de Godoi Pereira
- Department of Exact and Earth Sciences, Bahia State University, Silveira Martins Street, N. 2555, Cabula, 41150-000 Salvador, BA, Brazil
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Povedano-Priego C, Jroundi F, Morales-Hidalgo M, Pinel-Cabello M, Peula-Ruiz E, Merroun ML, Martin-Sánchez I. Unveiling fungal diversity in uranium and glycerol-2-phosphate-amended bentonite microcosms: Implications for radionuclide immobilization within the Deep Geological Repository system. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 908:168284. [PMID: 37924892 DOI: 10.1016/j.scitotenv.2023.168284] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 10/31/2023] [Accepted: 10/31/2023] [Indexed: 11/06/2023]
Abstract
Uranium (U) represents the preeminent hazardous radionuclide within the context of nuclear waste repositories. Indigenous microorganisms in bentonite can influence radionuclide speciation and migration in Deep Geological Repositories (DGRs) for nuclear waste storage. While bacterial communities in bentonite samples have been extensively studied, the impact of fungi has been somewhat overlooked. Here, we investigate the geomicrobiological processes in bentonite microcosms amended with uranyl nitrate and glycerol-2-phosphate (G2P) for six-month incubation. ITS sequencing revealed that the fungal community was mainly composed of Ascomycota (96.6 %). The presence of U in microcosms enriched specific fungal taxa, such as Penicillium and Fusarium, potentially associated with uranium immobilization mechanisms. Conversely, the amendment of U into G2P-suplemented samples exhibited minimal impact, resulting in a fungal community akin to the control group. Several fungal strains were isolated from bentonite microcosms to explore their potential in the U biomineralization, including Fusarium oxysporum, Aspergillus sp., Penicillium spp., among others. High Annular Angle Dark-Field Scanning Transmission Electron Microscopy (HAADF) analyses showed the capacity of F. oxysporum B1 to form U-phosphate mineral phases, likely mediated by phosphatase activity. Therefore, our study emphasizes the need to take into account indigenous bentonite fungi in the overall assessment of the impact of microbial processes in the immobilization of U within DGRs environments.
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Affiliation(s)
- Cristina Povedano-Priego
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
| | - Fadwa Jroundi
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
| | - Mar Morales-Hidalgo
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
| | - María Pinel-Cabello
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
| | - Esther Peula-Ruiz
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
| | - Mohamed L Merroun
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
| | - Inés Martin-Sánchez
- Department of Microbiology, University of Granada, Campus Fuentenueva s/n 18071, Granada, Spain.
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Xin J, Hong C, Wei J, Qie J, Wang H, Lei B, Li X, Cai Z, Kang Q, Zeng Z, Liu Y. A comprehensive review of radioactive pollution treatment of uranium mill tailings. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:102104-102128. [PMID: 37684506 DOI: 10.1007/s11356-023-29401-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Accepted: 08/15/2023] [Indexed: 09/10/2023]
Abstract
Natural uranium is a crucial resource for clean nuclear energy, which has brought significant economic and social benefits to humanity. However, the development and utilization of uranium resources have also resulted in the accumulation of vast amounts of uranium mill tailings (UMTs), which pose a potential threat to human health and the ecological environment. This paper reviews the research progress on UMTs treatment technologies, including cover disposal, solidification disposal, backfilling disposal, and bioremediation methods. It is found that cover disposal is a versatile method for the long-term management of UMTs, the engineering performance and durability of the cover system can be improved by choosing suitable stabilizers for the cover layer. Solidification disposal can convert UMTs into solid waste for permanent disposal, but it produces a large amount of waste and requires high operating costs; it is necessary to explore the effectiveness and efficiency of solidification disposal for UMTs, while minimizing the bad environmental impact. Backfilling disposal realizes the resource utilization of solid waste, but the high radon exhalation rate caused by the UMTs backfilling also needs to be considered. Bioremediation methods have low investment costs and are less likely to cause secondary pollution, but the remediation efficiency is low, it can be combined with other treatment technologies to remedy the defects of a single remediation method. The article concludes with key issues and corresponding suggestions for the current UMTs treatment methods, which can provide theoretical guidance and reference for further development and application of radioactive pollution treatment of UMTs.
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Affiliation(s)
- Jiayi Xin
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China
| | - Changshou Hong
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China.
| | - Jia Wei
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China
| | - Jingwen Qie
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China
| | - Hong Wang
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China
| | - Bo Lei
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China
| | - Xiangyang Li
- School of Resources, Environmental and Safety Engineering, University of South China, Hengyang, 421001, China
| | - Ziqi Cai
- School of Energy and Power Engineering, Xi'an Jiaotong University, Xi'an, 710000, China
| | - Qian Kang
- School of Emergency Management and Safety Engineering, Jiangxi University of Science and Technology, Ganzhou, 341000, China
| | - Zhiwei Zeng
- Department of Radiological Medicine and Environmental Medicine, China Institute for Radiation Protection, Taiyuan, 030000, China
| | - Yong Liu
- College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen, 518061, China
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Zhu T, Zeng Q, Zhao C, Wen Y, Li S, Li F, Lan T, Yang Y, Liu N, Sun Q, Liao J. Extracellular biomineralization of uranium and its toxicity alleviation to Bacillus thuringiensis X-27. JOURNAL OF ENVIRONMENTAL RADIOACTIVITY 2023; 261:107126. [PMID: 36805950 DOI: 10.1016/j.jenvrad.2023.107126] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 01/19/2023] [Accepted: 02/01/2023] [Indexed: 06/18/2023]
Abstract
Uranium biomineralization can slow uranium migration in the environment and thus prevent it from further contaminating the surroundings. Investigations into the uranium species, pH, inorganic phosphate (Pi) concentration, and microbial viability during biomineralization by microorganisms are crucial for understanding the mineralization mechanism. In this study, Bacillus thuringiensis X-27 was isolated from soil contaminated with uranium and was used to investigate the formation process of uranium biominerals induced by X-27. The results showed that as biomineralization proceeded, amorphous uranium-containing deposits were generated and transformed into crystalline minerals outside cells, increasing the overall concentration of uramphite. This is a cumulative rather than abrupt process. Notably, B. thuringiensis X-27 precipitated uranium outside the cell surface within 0.5 h, while the release of Pi into the extracellular environment and the change of pH to alkalescence further promoted the formation of uramphite. In addition, cell viability determination showed that the U(VI) biomineralization induced by B. thuringiensis X-27 was instrumental in alleviating the toxicity of U(VI) to cells. This work offers insight into the mechanism of U(VI) phosphate biomineralization and is a reference for bioremediation-related studies.
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Affiliation(s)
- Ting Zhu
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China; Key Laboratory of Bio-resources & Eco-environment of the Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, PR China
| | - Qian Zeng
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Changsong Zhao
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China; Key Laboratory of Bio-resources & Eco-environment of the Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, PR China
| | - Yufeng Wen
- Department of Life Sciences, Jilin University, Street Qianjin 2699, Changchun, 130012, PR China
| | - Shangqing Li
- Department of Biological Sciences, Xi'an Jiaotong-Liverpool University, Suzhou, 215000, PR China
| | - Feize Li
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Tu Lan
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Yuanyou Yang
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Ning Liu
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Qun Sun
- Key Laboratory of Bio-resources & Eco-environment of the Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, PR China.
| | - Jiali Liao
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
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Zeng Q, Zhu T, Wen Y, Li F, Cheng Y, Chen S, Lan T, Yang Y, Liao J, Sun Q, Liu N. The dynamic behavior and mechanism of uranium (VI) biomineralization in Enterobacter sp. X57. CHEMOSPHERE 2022; 298:134196. [PMID: 35276103 DOI: 10.1016/j.chemosphere.2022.134196] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 02/22/2022] [Accepted: 03/01/2022] [Indexed: 06/14/2023]
Abstract
The important role of microbes in the biomineralization and migration behavior of uranium in the field of environmental chemistry has been well emphasized in previous work. However, limited work on mineralization processes of indigenous microorganism has prevented us from a deeper understanding of the process and mechanisms of uranium biomineralization. In this work, the dynamic process and mechanism of uranium biomineralization in Enterobacter sp. X57, a novel uranium-tolerant microorganism separated from uranium contaminated soil, were systematically investigated. Enterobacter sp. X57 can induce intracellular mineralization of U (VI) to Uramphite (NH4UO2PO4·3H2O) under neutral conditions by alkaline phosphatase. In this biomineralization process, soluble U (VI) first bonded with the amino and phosphate groups on the plasma membrane, providing initial nucleation site for the formation of U (VI) biominerals. Then the impairment of cell barrier function and the enhancement of alkaline phosphatase metabolism occurred with the accumulation of uranium in cells, creating a possible pathway for soluble U (VI) to diffuse into the cell and be further mineralized into U (VI)-phosphate minerals. All the results revealed that the intracellular biomineralization of uranium by Enterobacter sp. X57 was a combined result of biosorption, intracellular accumulation and phosphatase metabolism. These findings may contribute to a better understanding of uranium biomineralization behavior and mechanism of microorganisms, as well as possible in-situ bioremediation strategies for uranium by indigenous microorganisms.
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Affiliation(s)
- Qian Zeng
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Ting Zhu
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China; Key Laboratory of Biological Resource and Ecological Environment of the Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, PR China
| | - Yufeng Wen
- Department of Life Sciences, Jilin University, Street Qianjin 2699, Changchun, 130012, PR China
| | - Feize Li
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Yanxia Cheng
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Shunzhang Chen
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Tu Lan
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Yuanyou Yang
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
| | - Jiali Liao
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Qun Sun
- Key Laboratory of Biological Resource and Ecological Environment of the Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610064, PR China
| | - Ning Liu
- Key Laboratory of Radiation Physics and Technology of the Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China
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6
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Talaromyces amestolkiae uses organic phosphate sources for the treatment of uranium-contaminated water. Biometals 2022; 35:335-348. [PMID: 35195804 DOI: 10.1007/s10534-022-00374-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Accepted: 02/14/2022] [Indexed: 11/02/2022]
Abstract
Fungi have received particular attention in regards to alternatives for bioremediation of heavy metal contaminated locales. Enzymes produced by filamentous fungi, such as phosphatases, can precipitate heavy metal ions in contaminated environments, forming metal phosphates (insoluble). Thus, this research aimed to analyze fungi for uranium biomineralization capacity. For this, Gongronella butleri, Penicillium piscarium, Rhodotorula sinensis and Talaromyces amestolkiae were evaluated. Phytate and glycerol 2-phosphate were used as the phosphate sources in the culture media at pH 3.5 and 5.5, with and without uranium ions. After 4 weeks of fungal growth, evaluated fungi were able to produce high concentrations of phosphates in the media. T. amestolkiae was the best phosphate producer, using phytate as an organic source. During fungal growth, there was no change in pH level of the culture medium. After 3 weeks of T. amestolkiae growth in medium supplemented with phytate, there was a reduction between 20 and 30% of uranium concentrations, with high precipitation of uranium and phosphate on the fungal biomass. The fungi analyzed in this research can use the phytic acid present in the medium and produce high concentrations of phosphate; which, in the environment, can assist in the heavy metal biomineralization processes, even in acidic environments. Such metabolic capabilities of fungi can be useful in decontaminating uranium-contaminated environments.
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7
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Geng R, Yuan L, Shi L, Qiang S, Li Y, Liang J, Li P, Zheng G, Fan Q. New insights into the sorption of U(VI) on kaolinite and illite in the presence of Aspergillus niger. CHEMOSPHERE 2022; 288:132497. [PMID: 34626657 DOI: 10.1016/j.chemosphere.2021.132497] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Revised: 10/03/2021] [Accepted: 10/05/2021] [Indexed: 06/13/2023]
Abstract
The regulation effect of Aspergillus niger to the sorption behavior of U(VI) on kaolinite and illite was studied through investigating the enrichment of U(VI) on kaolinite-Aspergillus niger and illite-Aspergillus niger composites. Kaolinite- or illite-A. niger composites were prepared through co-culturation method. Results showed that U(VI) sorption on kaolinite and illite in different pH ranges could be attributed to ion exchange, outer-sphere complexes (OSCs), and inner-sphere complexes (ISCs), while only the ISCs on the bio-composites. Moreover, micro-spectroscopy tests revealed that U(VI) coordinate with phosphate, amide, and carboxyl groups on illite- and kaolinite- A. niger composites. X-ray photoelectron spectroscopy (XPS) further found that U(VI) was partly reduced to non-crystalline U(IV) by A. niger in the bio-composites, occurring as phosphate coordination polymers or biomass-associated monomers. The findings herein provide further insight into the immobilization and migration of uranium in environments.
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Affiliation(s)
- Rongyue Geng
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Longmiao Yuan
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Leiping Shi
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Shirong Qiang
- Key Laboratory of Preclinical Study for New Drugs of Gansu Province, Institute of Physiology, School of Basic Medical Sciences, Lanzhou University, Lanzhou, 730000, China
| | - Yuqiang Li
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China
| | - Jianjun Liang
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; Key Laboratory of Petroleum Resources, Gansu Province, Lanzhou, 730000, China
| | - Ping Li
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; Key Laboratory of Petroleum Resources, Gansu Province, Lanzhou, 730000, China
| | - Guodong Zheng
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; Key Laboratory of Petroleum Resources, Gansu Province, Lanzhou, 730000, China
| | - Qiaohui Fan
- Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, 730000, China; Key Laboratory of Petroleum Resources, Gansu Province, Lanzhou, 730000, China.
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Jimenez-Martinez J, Nguyen J, Or D. Controlling pore-scale processes to tame subsurface biomineralization. RE/VIEWS IN ENVIRONMENTAL SCIENCE AND BIO/TECHNOLOGY 2022; 21:27-52. [PMID: 35221831 PMCID: PMC8831379 DOI: 10.1007/s11157-021-09603-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/28/2021] [Accepted: 12/06/2021] [Indexed: 06/14/2023]
Abstract
Microorganisms capable of biomineralization can catalyze mineral precipitation by modifying local physical and chemical conditions. In porous media, such as soil and rock, these microorganisms live and function in highly heterogeneous physical, chemical and ecological microenvironments, with strong local gradients created by both microbial activity and the pore-scale structure of the subsurface. Here, we focus on extracellular bacterial biomineralization, which is sensitive to external heterogeneity, and review the pore-scale processes controlling microbial biomineralization in natural and engineered porous media. We discuss how individual physical, chemical and ecological factors integrate to affect the spatial and temporal control of biomineralization, and how each of these factors contributes to a quantitative understanding of biomineralization in porous media. We find that an improved understanding of microbial behavior in heterogeneous microenvironments would promote understanding of natural systems and output in diverse technological applications, including improved representation and control of fluid mixing from pore to field scales. We suggest a range of directions by which future work can build from existing tools to advance each of these areas to improve understanding and predictability of biomineralization science and technology.
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Affiliation(s)
- Joaquin Jimenez-Martinez
- Department of Water Resources and Drinking Water, Eawag, Dübendorf, Switzerland
- Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, Zürich, Switzerland
| | - Jen Nguyen
- Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC V6T 1Z3 Canada
- School of Biomedical Engineering, University of British Columbia, Vancouver, BC V6T 1Z3 Canada
| | - Dani Or
- Division of Hydrologic Sciences, Desert Research Institute, Reno, NV USA
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Chi ZL, Yu GH, Kappler A, Liu CQ, Gadd GM. Fungal-Mineral Interactions Modulating Intrinsic Peroxidase-like Activity of Iron Nanoparticles: Implications for the Biogeochemical Cycles of Nutrient Elements and Attenuation of Contaminants. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:672-680. [PMID: 34905360 DOI: 10.1021/acs.est.1c06596] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Fungal-mediated extracellular reactive oxygen species (ROS) are essential for biogeochemical cycles of carbon, nitrogen, and contaminants in terrestrial environments. These ROS levels may be modulated by iron nanoparticles that possess intrinsic peroxidase (POD)-like activity (nanozymes). However, it remains largely undescribed how fungi modulate the POD-like activity of the iron nanoparticles with various crystallinities and crystal facets. Using well-controlled fungal-mineral cultivation experiments, here, we showed that fungi possessed a robust defect engineering strategy to modulate the POD-like activity of the attached iron minerals by decreasing the catalytic activity of poorly ordered ferrihydrite but enhancing that of well-crystallized hematite. The dynamics of POD-like activity were found to reside in molecular trade-offs between lattice oxygen and oxygen vacancies in the iron nanoparticles, which may be located in a cytoprotective fungal exoskeleton. Together, our findings unveil coupled POD-like activity and oxygen redox dynamics during fungal-mineral interactions, which increase the understanding of the catalytic mechanisms of POD-like nanozymes and microbial-mediated biogeochemical cycles of nutrient elements as well as the attenuation of contaminants in terrestrial environments.
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Affiliation(s)
- Zhi-Lai Chi
- Institute of Surface-Earth System Science, School of Earth System Science, Tianjin Key Laboratory of Earth Critical Zone Science and Sustainable Development in Bohai Rim, Tianjin University, Tianjin 300072, China
- Jiangsu Provincial Key Laboratory for Organic Solid Waste Utilization, College of Resource & Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Guang-Hui Yu
- Institute of Surface-Earth System Science, School of Earth System Science, Tianjin Key Laboratory of Earth Critical Zone Science and Sustainable Development in Bohai Rim, Tianjin University, Tianjin 300072, China
| | - Andreas Kappler
- Geomicrobiology, Centre for Applied Geosciences, University of Tübingen, Tübingen 72076, Germany
| | - Cong-Qiang Liu
- Institute of Surface-Earth System Science, School of Earth System Science, Tianjin Key Laboratory of Earth Critical Zone Science and Sustainable Development in Bohai Rim, Tianjin University, Tianjin 300072, China
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee DD1 5EH, Scotland, U.K
- State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, Beijing 102249, China
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10
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Kang X, Csetenyi L, Gao X, Gadd GM. Solubilization of struvite and biorecovery of cerium by Aspergillus niger. Appl Microbiol Biotechnol 2022; 106:821-833. [PMID: 34981166 PMCID: PMC8763747 DOI: 10.1007/s00253-021-11721-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2021] [Revised: 11/25/2021] [Accepted: 11/26/2021] [Indexed: 11/04/2022]
Abstract
Cerium has many modern applications such as in renewable energies and the biosynthesis of nanomaterials. In this research, natural struvite was solubilized by Aspergillus niger and the biomass-free struvite leachate was investigated for its ability to recover cerium. It was shown that struvite was completed solubilized following 2 weeks of fungal growth, which released inorganic phosphate (Pi) from the mineral by the production of oxalic acid. Scanning electron microscopy (SEM) showed that crystals with distinctive morphologies were formed in the natural struvite leachate after mixing with Ce3+. Energy-dispersive X-ray analysis (EDXA), X-ray diffraction (XRD) and Fourier-transform infrared spectroscopy (FTIR) confirmed the formation of cerium phosphate hydrate [Ce(PO4)·H2O] at lower Ce concentrations and a mixture of phosphate and cerium oxalate decahydrate [Ce2(C2O4)3·10H2O] at higher Ce concentrations. The formation of these biogenic Ce minerals leads to the removal of > 99% Ce from solution. Thermal decomposition experiments showed that the biogenic Ce phosphates could be transformed into a mixture of CePO4 and CeO2 (cerianite) after heat treatment at 1000 °C. These results provide a new perspective of the fungal biotransformation of soluble REE species using struvite leachate, and also indicate the potential of using the recovered REE as biomaterial precursors with possible applications in the biosynthesis of novel nanomaterials, elemental recycling and biorecovery. KEY POINTS: • Cerium was recovered using a struvite leachate produced by A. niger. • Oxalic acid played a major role in struvite solubilization and Ce phosphate biorecovery. • Resulting nanoscale mineral products could serve as a precursor for Ce oxide synthesis.
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Affiliation(s)
- Xia Kang
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK, Scotland
- Key Laboratory of Environmental and Applied Microbiology, CAS; Environmental Microbiology Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, 610041, China
| | - Laszlo Csetenyi
- Concrete Technology Group, Department of Civil Engineering, University of Dundee, Dundee,, DD1 4HN, UK, Scotland
| | - Xiang Gao
- School of Chemistry, University of St Andrews, St Andrews, KY16 9ST, Scotland, UK
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK, Scotland.
- State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, 18 Fuxue Road, Changping District, Beijing, 102249, China.
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11
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Schaefer S, Steudtner R, Hübner R, Krawczyk-Bärsch E, Merroun ML. Effect of Temperature and Cell Viability on Uranium Biomineralization by the Uranium Mine Isolate Penicillium simplicissimum. Front Microbiol 2021; 12:802926. [PMID: 35003034 PMCID: PMC8728092 DOI: 10.3389/fmicb.2021.802926] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Accepted: 11/22/2021] [Indexed: 11/13/2022] Open
Abstract
The remediation of heavy-metal-contaminated sites represents a serious environmental problem worldwide. Currently, cost- and time-intensive chemical treatments are usually performed. Bioremediation by heavy-metal-tolerant microorganisms is considered a more eco-friendly and comparatively cheap alternative. The fungus Penicillium simplicissimum KS1, isolated from the flooding water of a former uranium (U) mine in Germany, shows promising U bioremediation potential mainly through biomineralization. The adaption of P. simplicissimum KS1 to heavy-metal-contaminated sites is indicated by an increased U removal capacity of up to 550 mg U per g dry biomass, compared to the non-heavy-metal-exposed P. simplicissimum reference strain DSM 62867 (200 mg U per g dry biomass). In addition, the effect of temperature and cell viability of P. simplicissimum KS1 on U biomineralization was investigated. While viable cells at 30°C removed U mainly extracellularly via metabolism-dependent biomineralization, a decrease in temperature to 4°C or use of dead-autoclaved cells at 30°C revealed increased occurrence of passive biosorption and bioaccumulation, as confirmed by scanning transmission electron microscopy. The precipitated U species were assigned to uranyl phosphates with a structure similar to that of autunite, via cryo-time-resolved laser fluorescence spectroscopy. The major involvement of phosphates in U precipitation by P. simplicissimum KS1 was additionally supported by the observation of increased phosphatase activity for viable cells at 30°C. Furthermore, viable cells actively secreted small molecules, most likely phosphorylated amino acids, which interacted with U in the supernatant and were not detected in experiments with dead-autoclaved cells. Our study provides new insights into the influence of temperature and cell viability on U phosphate biomineralization by fungi, and furthermore highlight the potential use of P. simplicissimum KS1 particularly for U bioremediation purposes. ![]()
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Affiliation(s)
- Sebastian Schaefer
- Institute of Resource Ecology, Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany
- Sebastian Schaefer,
| | - Robin Steudtner
- Institute of Resource Ecology, Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany
| | - René Hübner
- Institute of Ion Beam Physics and Materials Research, Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany
| | - Evelyn Krawczyk-Bärsch
- Institute of Resource Ecology, Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany
- *Correspondence: Evelyn Krawczyk-Bärsch,
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12
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Guo K, Cheng C, Chen L, Xie J, Li S, He S, Xiao F. Uranium enrichment performence and uranium stress mechanism of Deinococcus radiodurans. J Radioanal Nucl Chem 2021. [DOI: 10.1007/s10967-021-08018-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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13
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Newsome L, Falagán C. The Microbiology of Metal Mine Waste: Bioremediation Applications and Implications for Planetary Health. GEOHEALTH 2021; 5:e2020GH000380. [PMID: 34632243 PMCID: PMC8490943 DOI: 10.1029/2020gh000380] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Revised: 08/17/2021] [Accepted: 08/20/2021] [Indexed: 05/13/2023]
Abstract
Mine wastes pollute the environment with metals and metalloids in toxic concentrations, causing problems for humans and wildlife. Microorganisms colonize and inhabit mine wastes, and can influence the environmental mobility of metals through metabolic activity, biogeochemical cycling and detoxification mechanisms. In this article we review the microbiology of the metals and metalloids most commonly associated with mine wastes: arsenic, cadmium, chromium, copper, lead, mercury, nickel and zinc. We discuss the molecular mechanisms by which bacteria, archaea, and fungi interact with contaminant metals and the consequences for metal fate in the environment, focusing on long-term field studies of metal-impacted mine wastes where possible. Metal contamination can decrease the efficiency of soil functioning and essential element cycling due to the need for microbes to expend energy to maintain and repair cells. However, microbial communities are able to tolerate and adapt to metal contamination, particularly when the contaminant metals are essential elements that are subject to homeostasis or have a close biochemical analog. Stimulating the development of microbially reducing conditions, for example in constructed wetlands, is beneficial for remediating many metals associated with mine wastes. It has been shown to be effective at low pH, circumneutral and high pH conditions in the laboratory and at pilot field-scale. Further demonstration of this technology at full field-scale is required, as is more research to optimize bioremediation and to investigate combined remediation strategies. Microbial activity has the potential to mitigate the impacts of metal mine wastes, and therefore lessen the impact of this pollution on planetary health.
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Affiliation(s)
- Laura Newsome
- Camborne School of Mines and Environment and Sustainability InstituteUniversity of ExeterPenrynUK
| | - Carmen Falagán
- Camborne School of Mines and Environment and Sustainability InstituteUniversity of ExeterPenrynUK
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14
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Zhong J, Hu X, Liu X, Cui X, Lv Y, Tang C, Zhang M, Li H, Qiu L, Sun W. Isolation and Identification of Uranium Tolerant Phosphate-Solubilizing Bacillus spp. and Their Synergistic Strategies to U(VI) Immobilization. Front Microbiol 2021; 12:676391. [PMID: 34326819 PMCID: PMC8313988 DOI: 10.3389/fmicb.2021.676391] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Accepted: 05/03/2021] [Indexed: 11/13/2022] Open
Abstract
The remediation of uranium (U) through phosphate-solubilizing bacteria (PSB) is an emerging technique as well as an interesting phenomenon for transforming mobile U into stable minerals in the environment. While studies are well needed for in-depth understanding of the mechanism of U(VI) immobilization by PSB. In this study, two PSB were isolated from a U-tailing repository site. These bacterial strains (ZJ-1 and ZJ-3) were identified as Bacillus spp. by the sequence analysis of 16S ribosomal RNA (rRNA) genes. Incubation of PSB in liquid medium showed that the isolate ZJ-3 could solubilize more than 230 mg L-1 P from glycerol-3-phosphate and simultaneously removed over 70% of 50 mg L-1 U(VI) within 1 h. During this process, the rapid appearance of yellow precipitates was observed. The microscopic and spectroscopic analysis demonstrated that the precipitates were associated with U-phosphate compound in the form of saleeite-like substances. Besides, scanning electron microscopy coupled with energy-dispersive X-ray (SEM-EDS) and Fourier transform infrared spectroscopy (FTIR) analysis of the precipitates confirmed that the extracellular polymeric substances (EPS) might also play a key role in U sequestration. Furthermore, SEM and FTIR analysis revealed that part of U(VI) was adsorbed on the bacterial surface through cellular phosphate, hydroxy, carboxyl, and amide groups. This study provides new insights into the synergistic strategies enhancing U immobilization rates by Bacillus spp. that uses glycerol-3-phosphate as the phosphorus source, the process of which contributes to harmful pollutant biodegradation.
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Affiliation(s)
- Juan Zhong
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China.,GRIMAT Engineering Institute Co., Ltd., Beijing, China
| | - Xuewu Hu
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China.,School of Metallurgical and Ecological Engineering, University of Science and Technology Beijing, Beijing, China
| | - Xingyu Liu
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China
| | - Xinglan Cui
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China
| | - Ying Lv
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China
| | - Chuiyun Tang
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China
| | - Mingjiang Zhang
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China
| | - Hongxia Li
- GRINM Resources and Environment Tech. Co., Ltd., Beijing, China.,National Engineering Laboratory of Biohydrometallurgy, GRINM Group Co., Ltd., Beijing, China
| | - Lang Qiu
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou, China
| | - Weimin Sun
- Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou, China
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15
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Zeng G, Qiao S, Wang X, Sheng M, Wei M, Chen Q, Xu H, Xu F. Immobilization of cadmium by Burkholderia sp. QY14 through modified microbially induced phosphate precipitation. JOURNAL OF HAZARDOUS MATERIALS 2021; 412:125156. [PMID: 33556857 DOI: 10.1016/j.jhazmat.2021.125156] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 01/12/2021] [Accepted: 01/13/2021] [Indexed: 05/28/2023]
Abstract
Microbially induced phosphate precipitation (MIPP) is an advanced bioremediation technology to immobilize heavy metals. An indigenous bacterium QY14 with the function of mineralization isolated from Cd contaminated farmland soil was identified as Burkholderia ambifaria. The minimum inhibitory concentration value for QY14 was 550 mg/L for soluble Cd concentration. This study found that the addition of 10 mM Ca2+ during MIPP process could significantly increase the removal ratio of Cd, and the maximum removal ratio of Cd with 10 mM Ca2+ and without Ca2+ in solution was 99.97% and 76.14%, respectively. The increase of acid phosphatase activity and the formation of precipitate containing calcium caused by 10 mM Ca2+ addition contributed the increase of Cd removal efficiency. The results of SEM-EDS, FTIR and XRD showed that Cd was removed by forming Cd containing hydroxyapatite (Cd-HAP). In addition, the dissolution experiment showed the Cd release ratio of Cd-HAP (0.01‰ at initial pH 3.0 of solution) was lower than Cd-absorbed HAP, indicating that Cd was more likely removed by the formation of Ca10-xCdx(PO4)6(OH)2 solid solution. Our findings revealed MIPP-based bioremediation supplied with 10 mM Ca2+ could increase the Cd removal and could potentially be applied for Cd remediation.
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Affiliation(s)
- Guoquan Zeng
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Suyu Qiao
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Xitong Wang
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Mingping Sheng
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Mingyang Wei
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Qun Chen
- State Key Laboratory of Hydraulics and Mountain River Engineering, College of Water Resources and Hydropower, Sichuan University, Chengdu 610065, Sichuan, PR China
| | - Heng Xu
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China.
| | - Fei Xu
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, Sichuan, PR China.
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16
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Ferrier J, Csetenyi L, Gadd GM. Fungal transformation of natural and synthetic cobalt-bearing manganese oxides and implications for cobalt biogeochemistry. Environ Microbiol 2021; 24:667-677. [PMID: 33955141 DOI: 10.1111/1462-2920.15526] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 04/08/2021] [Accepted: 04/12/2021] [Indexed: 11/29/2022]
Abstract
Manganese oxide minerals can become enriched in a variety of metals through adsorption and redox processes, and this forms the basis for a close geochemical relationship between Mn oxide phases and Co. Since oxalate-producing fungi can effect geochemical transformation of Mn oxides, an understanding of the fate of Co during such processes could provide new insights on the geochemical behaviour of Co. In this work, the transformation of Mn oxides by Aspergillus niger was investigated using a Co-bearing manganiferous laterite, and a synthetic Co-doped birnessite. A. niger could transform laterite in both fragmented and powder forms, resulting in formation of biomineral crusts that were composed of Mn oxalates hosting Co, Ni and, in transformed laterite fragments, Mg. Total transformation of Co-doped birnessite resulted in precipitation of Co-bearing Mn oxalate. Fungal transformation of the Mn oxide phases included Mn(III,IV) reduction by oxalate, and may also have involved reduction of Co(III) to Co(II). These findings demonstrate that oxalate-producing fungi can influence Co speciation in Mn oxides, with implications for other hosted metals including Al and Fe. This work also provides further understanding of the roles of fungi as geoactive agents which can inform potential applications in metal bioremediation, recycling and biorecovery.
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Affiliation(s)
- John Ferrier
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK
| | - Laszlo Csetenyi
- School of Science and Engineering, Fulton Building, University of Dundee, Dundee, Scotland, DD1 5HN, UK
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK.,State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, 18 Fuxue Road, Changping District, Beijing, 102249, China
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17
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Lopez‐Fernandez M, Jroundi F, Ruiz‐Fresneda MA, Merroun ML. Microbial interaction with and tolerance of radionuclides: underlying mechanisms and biotechnological applications. Microb Biotechnol 2021; 14:810-828. [PMID: 33615734 PMCID: PMC8085914 DOI: 10.1111/1751-7915.13718] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2020] [Revised: 11/09/2020] [Accepted: 11/12/2020] [Indexed: 11/26/2022] Open
Abstract
Radionuclides (RNs) generated by nuclear and civil industries are released in natural ecosystems and may have a hazardous impact on human health and the environment. RN-polluted environments harbour different microbial species that become highly tolerant of these elements through mechanisms including biosorption, biotransformation, biomineralization and intracellular accumulation. Such microbial-RN interaction processes hold biotechnological potential for the design of bioremediation strategies to deal with several contamination problems. This paper, with its multidisciplinary approach, provides a state-of-the-art review of most research endeavours aimed to elucidate how microbes deal with radionuclides and how they tolerate ionizing radiations. In addition, the most recent findings related to new biotechnological applications of microbes in the bioremediation of radionuclides and in the long-term disposal of nuclear wastes are described and discussed.
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Affiliation(s)
- Margarita Lopez‐Fernandez
- Department of MicrobiologyUniversity of GranadaAvenida Fuentenueva s/nGranada18071Spain
- Present address:
Institute of Resource EcologyHelmholtz‐Zentrum Dresden‐RossendorfBautzner Landstraße 400Dresden01328Germany
| | - Fadwa Jroundi
- Department of MicrobiologyUniversity of GranadaAvenida Fuentenueva s/nGranada18071Spain
| | - Miguel A. Ruiz‐Fresneda
- Department of MicrobiologyUniversity of GranadaAvenida Fuentenueva s/nGranada18071Spain
- Present address:
Departamento de Cristalografía y Biología EstructuralCentro Superior de Investigaciones Científicas (CSIC)Instituto de Química‐Física Rocasolano (IQFR)Calle Serrano 119Madrid28006Spain
| | - Mohamed L. Merroun
- Department of MicrobiologyUniversity of GranadaAvenida Fuentenueva s/nGranada18071Spain
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18
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Morrison KD, Zavarin M, Kersting AB, Begg JD, Mason HE, Balboni E, Jiao Y. Influence of Uranium Concentration and pH on U-Phosphate Biomineralization by Caulobacter OR37. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:1626-1636. [PMID: 33471994 DOI: 10.1021/acs.est.0c05437] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Uranium contamination of soils and groundwater in the United States represents a significant health risk and will require multiple remediation approaches. Microbial phosphatase activity coupled to the addition of an organic P source has recently been studied as a remediation strategy that provides an extended release of inorganic P (Pi) into U-contaminated sites, resulting in the precipitation of meta-autunite minerals. Previous laboratory- and field-based biomineralization studies have investigated environments with relatively high U concentrations (>20 μM). However, most contaminated sites have much lower U concentrations (<2 μM). The Environmental Protection Agency (EPA) limit for U in drinking water is 0.126 μM. Reaching this regulatory limit becomes challenging as U concentrations approach autunite solubility. We studied the precipitation of U(VI)-phosphate minerals by an environmental isolate of Caulobacter sp. (strain OR37) from an Oak Ridge, Tennessee, U-contaminated site. Abiotic U(VI) solubility experiments reveal that U(VI)-phosphate minerals do not form in the presence of excess Pi (500 μM) when U(VI) concentrations are <1 μM and pH is <5. When OR37 cells are reacted under the same conditions with Pi or glycerol-2-phosphate, U(VI)-phosphate mineral formation was observed, along with the formation of intracellular polyphosphate granules. These results show that bacteria provide supersaturated microenvironments needed for U(VI)-phosphate mineralization while hydrolyzing organic P sources. This provides a pathway to lower U concentrations to below EPA limits for drinking water.
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19
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Li Q, Liu J, Gadd GM. Fungal bioremediation of soil co-contaminated with petroleum hydrocarbons and toxic metals. Appl Microbiol Biotechnol 2020; 104:8999-9008. [PMID: 32940735 PMCID: PMC7567682 DOI: 10.1007/s00253-020-10854-y] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Revised: 08/11/2020] [Accepted: 08/23/2020] [Indexed: 11/27/2022]
Abstract
Abstract Much research has been carried out on the bacterial bioremediation of soil contaminated with petroleum hydrocarbons and toxic metals but much less is known about the potential of fungi in sites that are co-contaminated with both classes of pollutants. This article documents the roles of fungi in soil polluted with both petroleum hydrocarbons and toxic metals as well as the mechanisms involved in the biotransformation of such substances. Soil characteristics (e.g., structural components, pH, and temperature) and intracellular or excreted extracellular enzymes and metabolites are crucial factors which affect the efficiency of combined pollutant transformations. At present, bioremediation of soil co-contaminated with petroleum hydrocarbons and toxic metals is mostly focused on the removal, detoxification, or degradation efficiency of single or composite pollutants of each type. Little research has been carried out on the metabolism of fungi in response to complex pollutant stress. To overcome current bottlenecks in understanding fungal bioremediation, the potential of new approaches, e.g., gradient diffusion film technology (DGT) and metabolomics, is also discussed. Key points • Fungi play important roles in soil co-contaminated with TPH and toxic metals. • Soil characteristics, enzymes, and metabolites are major factors in bioremediation. • DGT and metabolomics can be applied to overcome current bottlenecks.
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Affiliation(s)
- Qianwei Li
- State Key Laboratory of Heavy Oil Processing, State Key Laboratory of Petroleum Pollution Control, China University of Petroleum-Beijing, Beijing, 102249, China.
| | - Jicheng Liu
- State Key Laboratory of Heavy Oil Processing, State Key Laboratory of Petroleum Pollution Control, China University of Petroleum-Beijing, Beijing, 102249, China
| | - Geoffrey Michael Gadd
- State Key Laboratory of Heavy Oil Processing, State Key Laboratory of Petroleum Pollution Control, China University of Petroleum-Beijing, Beijing, 102249, China.
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK.
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20
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Coelho E, Reis TA, Cotrim M, Mullan TK, Corrêa B. Resistant fungi isolated from contaminated uranium mine in Brazil shows a high capacity to uptake uranium from water. CHEMOSPHERE 2020; 248:126068. [PMID: 32045976 DOI: 10.1016/j.chemosphere.2020.126068] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 01/15/2020] [Accepted: 01/29/2020] [Indexed: 05/27/2023]
Abstract
The Osamu Utsumi uranium mine occupies a 20 km2 area in the city of Caldas, which is located in the state of Minas Gerais, Brazil. Since mining activities ended at Osamu Utsumi 24 years ago, the surrounding area has become contaminated by acid effluents containing high concentrations of uranium. Thus, the aim of this study was to assess the uranium bioremediation capacity of 57 fungi isolated from the mine area. In tolerance tests, 38% (22) of the fungal isolates were considered tolerant to uranium, including 10 Penicillium species. At a uranium concentration of 2000 mg L-1 48 fungi did not exhibit mycelial growth index inhibition. Minimal inhibitory concentration (MIC) analysis showed growth of 25 fungi above a uranium concentration of 8000 mg L-1. At high uranium concentrations, some fungi (i.e., Talaromyces amestolkiae and Penicillium citrinum) showed morphological changes and pigment (melanin) production. Among the fungal isolates, those considered to be more tolerant to uranium were isolated from soil and sediment samples containing higher concentrations of heavy metal. When comparing the results of resistance/tolerance tests with those for uranium biosorption capacity, we concluded that the fungi isolated from the Osamu Utsumi mine with the best potential for uranium bioremediation were Gongronella butleri, Penicillium piscarium, Penicillium citrinum, Penicillium ludwigii, and Talaromyces amestolkiae. Biosorption tests with live fungal biomass showed that 11 species had a high potential for uranium uptake from contaminated water.
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Affiliation(s)
- Ednei Coelho
- Laboratório de Micotoxinas, Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, Av. Prof. Lineu Prestes, 1374, CEP, 05508-000, São Paulo, SP, Brazil.
| | - Tatiana Alves Reis
- Laboratório de Micotoxinas, Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, Av. Prof. Lineu Prestes, 1374, CEP, 05508-000, São Paulo, SP, Brazil
| | - Marycel Cotrim
- Centro de Química e Meio Ambiente (CQMA) - Instituto de Pesquisa Energéticas e Nucleares. Av. Prof. Lineu Prestes, 2242, CEP, 05508-000, São Paulo, SP, Brazil
| | - Thomas K Mullan
- Civil & Environmental Engineering - University of Strathclyde. James Weir Building, 75 Montrose Street, Glasgow, G1 1XJ, UK
| | - Benedito Corrêa
- Laboratório de Micotoxinas, Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, Av. Prof. Lineu Prestes, 1374, CEP, 05508-000, São Paulo, SP, Brazil
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21
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Coelho E, Reis TA, Cotrim M, Rizzutto M, Corrêa B. Bioremediation of water contaminated with uranium using Penicillium piscarium. Biotechnol Prog 2020; 36:e30322. [PMID: 32475081 DOI: 10.1002/btpr.3032] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2020] [Revised: 05/13/2020] [Accepted: 05/26/2020] [Indexed: 11/08/2022]
Abstract
Penicillium piscarium can be indicated as promising in the treatment of sites contaminated with uranium. Thus, this research aimed to analyze the P. piscarium dead biomass in uranium biosorption. This fungus was previously isolated from a highly contaminated uranium mine located in Brazil. Biosorption tests were carried out at pH 3.5 and 5.5 in solutions contaminated with concentrations of 1 to 100 mg/L of uranium nitrate. Our results showed that the dead biomass of P. piscarium was able to remove between 93.2 and 97.5% uranium from solutions at pH 3.5, at the end of the experiment, the pH of the solution increased to values above 5.6. Regarding the experiments carried out in solutions with pH 5.5, the dead biomass of the fungus was also able to remove between 38 and 92% uranium from the solution, at the end of the experiment, the pH of the solution increased to levels above 6.5. The analysis of electron microscopy, Energy-dispersive spectroscopy, and X-ray fluorescence demonstrated the high concentration of uranium precipitated on the surface of the fungal biomass. These results were impressive and demonstrate that the dead biomass of P. piscarium can be an important alternative to conventional processes for treating water contaminated with heavy metals, and we hope that these ecofriendly, inexpensive, and effective technologies be encouraged for the safe discharge of water from industrial activities.
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Affiliation(s)
- Ednei Coelho
- Laboratório de Micotoxinas, Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil
| | - Tatiana Alves Reis
- Laboratório de Micotoxinas, Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil
| | - Marycel Cotrim
- Centro de Química e Meio Ambiente (CQMA), Instituto de Pesquisa Energéticas e Nucleares, São Paulo, Brazil
| | - Marcia Rizzutto
- Departamento de Física Nuclear, Instituto de Física da Universidade de São Paulo (IF-USP), São Paulo, Brazil
| | - Benedito Corrêa
- Laboratório de Micotoxinas, Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil
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22
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Qin W, Wang CY, Ma YX, Shen MJ, Li J, Jiao K, Tay FR, Niu LN. Microbe-Mediated Extracellular and Intracellular Mineralization: Environmental, Industrial, and Biotechnological Applications. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e1907833. [PMID: 32270552 DOI: 10.1002/adma.201907833] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Revised: 01/09/2020] [Indexed: 06/11/2023]
Abstract
Microbe-mediated mineralization is ubiquitous in nature, involving bacteria, fungi, viruses, and algae. These mineralization processes comprise calcification, silicification, and iron mineralization. The mechanisms for mineral formation include extracellular and intracellular biomineralization. The mineral precipitating capability of microbes is often harnessed for green synthesis of metal nanoparticles, which are relatively less toxic compared with those synthesized through physical or chemical methods. Microbe-mediated mineralization has important applications ranging from pollutant removal and nonreactive carriers, to other industrial and biomedical applications. Herein, the different types of microbe-mediated biomineralization that occur in nature, their mechanisms, as well as their applications are elucidated to create a backdrop for future research.
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Affiliation(s)
- Wen Qin
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
| | - Chen-Yu Wang
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
| | - Yu-Xuan Ma
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
| | - Min-Juan Shen
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
| | - Jing Li
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
| | - Kai Jiao
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
| | - Franklin R Tay
- College of Graduate Studies, Augusta University, Augusta, GA, 30912, USA
| | - Li-Na Niu
- State Key Laboratory of Military Stomatology & National Clinical Research Center for Oral Diseases & Shaanxi Key Laboratory of Stomatology, Department of Prosthodontics, School of Stomatology, The Fourth Military Medical University, Xi'an, 710032, Shaanxi, China
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23
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Jiang L, Liu X, Yin H, Liang Y, Liu H, Miao B, Peng Q, Meng D, Wang S, Yang J, Guo Z. The utilization of biomineralization technique based on microbial induced phosphate precipitation in remediation of potentially toxic ions contaminated soil: A mini review. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 191:110009. [PMID: 31806252 DOI: 10.1016/j.ecoenv.2019.110009] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2019] [Revised: 11/12/2019] [Accepted: 11/26/2019] [Indexed: 06/10/2023]
Abstract
In recent years, many studies have been devoted to investigate the application of microbial induced phosphate precipitation (MIPP) process for potentially toxic element polluted soil remediation. MIPP biomineralization technique exhibits a great potential to efficiently remediate polluted soil considering its low cost, green and ecofriendly process, and simple in operation. This paper represented a review on the state of the art of polluted soil remediation based on MIPP technique. Briefly, certain defined criteria on targeted microbe selection was discussed; an overall review on the utilization of MIPP process for toxic ions biomineralization in soil was provided; influencing factors reported in the literature, such as pH, temperature, humic substances, coexisting ions, effective microbial population, and enzyme activity, were then comprehensively reviewed; finally; a special emphasis was given to enhance MIPP remediation performance in soil in future research.
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Affiliation(s)
- Luhua Jiang
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China.
| | - Xueduan Liu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China.
| | - Huaqun Yin
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
| | - Yili Liang
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China.
| | - Hongwei Liu
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
| | - Bo Miao
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
| | - Qingqing Peng
- The Environmental Monitoring Center of Hunan Province, Changsha, 410004, China
| | - Delong Meng
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
| | - Siqi Wang
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
| | - Jiejie Yang
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
| | - Ziwen Guo
- School of Minerals Processing and Bioengineering, Central South University, Changsha, 410083, China; Key Laboratory of Biometallurgy of Ministry of Education, Changsha, 410083, China
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24
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Suyamud B, Ferrier J, Csetenyi L, Inthorn D, Gadd GM. Biotransformation of struvite by Aspergillus niger: phosphate release and magnesium biomineralization as glushinskite. Environ Microbiol 2020; 22:1588-1602. [PMID: 32079035 DOI: 10.1111/1462-2920.14949] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 02/06/2020] [Accepted: 02/18/2020] [Indexed: 01/09/2023]
Abstract
Struvite (magnesium ammonium phosphate-MgNH4 PO4 ·6H2 O), which can extensively crystallize in wastewater treatments, is a potential source of N and P as fertilizer, as well as a means of P conservation. However, little is known of microbial interactions with struvite which would result in element release. In this work, the geoactive fungus Aspergillus niger was investigated for struvite transformation on solid and in liquid media. Aspergillus niger was capable of solubilizing natural (fragments and powder) and synthetic struvite when incorporated into solid medium, with accompanying acidification of the media, and extensive precipitation of magnesium oxalate dihydrate (glushinskite, Mg(C2 O4 ).2H2 O) occurring under growing colonies. In liquid media, A. niger was able to solubilize natural and synthetic struvite releasing mobile phosphate (PO4 3- ) and magnesium (Mg2+ ), the latter reacting with excreted oxalate resulting in precipitation of magnesium oxalate dihydrate which also accumulated within the mycelial pellets. Struvite was also found to influence the morphology of A. niger mycelial pellets. These findings contribute further understanding of struvite solubilization, element release and secondary oxalate formation, relevant to the biogeochemical cycling of phosphate minerals, and further directions utilizing these mechanisms in environmental biotechnologies such as element biorecovery and biofertilizer applications.
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Affiliation(s)
- Bongkotrat Suyamud
- Department of Sanitary Engineering, Faculty of Public Health, Mahidol University, Bangkok, 10400, Thailand.,Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, UK
| | - John Ferrier
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, UK
| | - Laszlo Csetenyi
- Concrete Technology Group, Department of Civil Engineering, University of Dundee, Dundee, DD1 4HN, Scotland, UK
| | - Duangrat Inthorn
- Department of Environmental Health Sciences, Faculty of Public Health, Mahidol University, Bangkok, 10400, Thailand.,Center of Excellence on Environmental Health and Toxicology (EHT), Commission on Higher Education (CHE), Ministry of Education, Bangkok, 10210, Thailand
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, UK.,State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, 18 Fuxue Road, Changping District, Beijing, 102249, China
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25
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Song J, Han B, Song H, Yang J, Zhang L, Ning P, Lin Z. Nonreductive biomineralization of uranium by Bacillus subtilis ATCC-6633 under aerobic conditions. JOURNAL OF ENVIRONMENTAL RADIOACTIVITY 2019; 208-209:106027. [PMID: 31442938 DOI: 10.1016/j.jenvrad.2019.106027] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 08/01/2019] [Accepted: 08/10/2019] [Indexed: 06/10/2023]
Abstract
Nonreductive biomineralization of uranium is a promising methodology for the removal of uranium contamination as it provides stable products and wide applications. However, the efficiency of mineralization has become a major obstacle for the removal of uranium contamination by this technology, and the mineralizing process still remains largely obscure. To solve this problem in a practical way, we report a fast nonreductive biomineralization process of uranium by Bacillus subtilis ATCC-6633, a widespread bacterium with environmentally-friendly applications. In this system, we demonstrated that the size and crystallization degree of the obtained nonreduced biomineralized products is significantly superior to the results reported in the literature under comparable conditions. Meanwhile, combined with SEM, TEM, and FT-IR, a mineralization process of uranium transfer from the outer surface of the Bacillus subtilis ATCC-6633 to the internal has been clearly observed, which was accompanied by the evolution of amorphous U(VI) to crystalline uramphite. This work uncovers whole-process insights into the nonreductive biomineralization of uranium by Bacillus subtilis ATCC-6633, paving a new way for the rapid and sustained removal of uranium contamination.
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Affiliation(s)
- Jianing Song
- School of Environment and Energy, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), South China University of Technology, Guangzhou, 510006, China; Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, South China University of Technology, Guangzhou, 510006, China
| | - Bin Han
- School of Environment and Energy, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), South China University of Technology, Guangzhou, 510006, China; Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, South China University of Technology, Guangzhou, 510006, China
| | - Han Song
- School of Environment and Energy, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), South China University of Technology, Guangzhou, 510006, China; Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, South China University of Technology, Guangzhou, 510006, China
| | - Jinrong Yang
- School of Environment and Energy, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), South China University of Technology, Guangzhou, 510006, China; Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, South China University of Technology, Guangzhou, 510006, China
| | - Lijuan Zhang
- School of Environment and Energy, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), South China University of Technology, Guangzhou, 510006, China; Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, South China University of Technology, Guangzhou, 510006, China.
| | - Ping Ning
- Faculty of Environmental Science and Engineering, Kunming University of Science and Technology, Kunming, 650093, China
| | - Zhang Lin
- School of Environment and Energy, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), South China University of Technology, Guangzhou, 510006, China; Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, South China University of Technology, Guangzhou, 510006, China
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26
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Yuan Y, Yu Q, Yang S, Wen J, Guo Z, Wang X, Wang N. Ultrafast Recovery of Uranium from Seawater by Bacillus velezensis Strain UUS-1 with Innate Anti-Biofouling Activity. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2019; 6:1900961. [PMID: 31559134 PMCID: PMC6755527 DOI: 10.1002/advs.201900961] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2019] [Revised: 06/29/2019] [Indexed: 05/05/2023]
Abstract
Highly-efficient recovery of uranium from seawater is of great concern in the growing demand for nuclear energy. Bacteria are thought to be potential alternatives for uranium recovery. Herein, a Bacillus velezensis strain, UUS-1, with highly-efficient uranium immobilization capacity is isolated and is used in the recovery of uranium from seawater. The strain exhibits time-dependent uranium recovery capacity and only immobilizes uranium after growing for 12 h. The carboxyl group together with the amino group inside the bacterial cells, but not previously identified phosphate group, are essential for uranium immobilization. UUS-1 shows broad-spectrum antimicrobial activity by producing diverse antimicrobial metabolites, which endows the strain with innate resistance to the biofouling of marine microorganisms. Based on the dry weight of the initially used bacterial cultures, UUS-1 concentrates uranium by 6.26 × 105 times and reaches the high immobilization capacity of 9.46 ± 0.39 mg U g-1 bacterial cultures in real seawater within 48 h, which is the fastest uranium immobilization capacity observed from real seawater. Overall considering the ultrafast and highly-efficient uranium recovery capacity and the innate anti-biofouling activity, UUS-1 is a promising alternative for uranium recovery from seawater.
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Affiliation(s)
- Yihui Yuan
- State Key Laboratory of Marine Resource Utilization in South China SeaHainan UniversityHaikou570228P. R. China
| | - Qiuhan Yu
- State Key Laboratory of Marine Resource Utilization in South China SeaHainan UniversityHaikou570228P. R. China
| | - Shuo Yang
- State Key Laboratory of Marine Resource Utilization in South China SeaHainan UniversityHaikou570228P. R. China
| | - Jun Wen
- Institute of Nuclear Physics and ChemistryChina Academy of Engineering PhysicsMianyang621900P. R. China
| | - Zhanhu Guo
- Integrated Composites Laboratory (ICL)Department of Chemical and Biomolecular EngineeringUniversity of TennesseeKnoxvilleTN37996USA
- College of Chemical and Environmental EngineeringShandong University of Science and TechnologyQingdao266590P. R. China
| | - Xiaolin Wang
- Institute of Nuclear Physics and ChemistryChina Academy of Engineering PhysicsMianyang621900P. R. China
| | - Ning Wang
- State Key Laboratory of Marine Resource Utilization in South China SeaHainan UniversityHaikou570228P. R. China
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27
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Fomina M, Hong JW, Gadd GM. Effect of depleted uranium on a soil microcosm fungal community and influence of a plant-ectomycorrhizal association. Fungal Biol 2019; 124:289-296. [PMID: 32389290 DOI: 10.1016/j.funbio.2019.08.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2019] [Revised: 07/18/2019] [Accepted: 08/03/2019] [Indexed: 01/23/2023]
Abstract
Fungi are one of the most biogeochemically active components of the soil microbiome, becoming particularly important in metal polluted terrestrial environments. There is scant information on the mycobiota of uranium (U) polluted sites and the effect of metallic depleted uranium (DU) stress on fungal communities in soil has not been reported. The present study aimed to establish the effect of DU contamination on a fungal community in soil using a culture-independent approach, fungal ribosomal intergenic spacer analysis (F-RISA). Experimental soil microcosms also included variants with plants (Pinus silvestris) and P. silvestris/Rhizopogon rubescens ectomycorrhizal associations. Soil contamination with DU resulted in the appearance of RISA bands of the ITS fragments of fungal metagenomic DNA that were characteristic of the genus Mortierella (Mortierellomycotina: Mucoromycota) in pine-free microcosms and for ectomycorrhizal fungi of the genus Scleroderma (Basidiomycota) in microcosms with mycorrhizal pines. The precise taxonomic affinity of the ITS fragments from the band appearing for non-mycorrhizal pines combined with DU remained uncertain, the most likely being related to the subphylum Zoopagomycotina. Thus, soil contamination by thermodynamically unstable metallic depleted uranium can cause a significant change in a soil fungal community under experimental conditions. These changes were also strongly affected by the presence of pine seedlings and their mycorrhizal status which impacted on DU biocorrosion and the release of bioavailable uranium species.
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Affiliation(s)
- Marina Fomina
- Zabolotny Institute of Microbiology and Virology, National Academy of Sciences of Ukraine, Kyiv, 03143, Ukraine; Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, United Kingdom
| | - Ji Won Hong
- Department of Taxonomy and Systematics, National Marine Biodiversity Institute of Korea, Seocheon, Chungcheongnam-do, 33662, South Korea
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, Scotland, United Kingdom.
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28
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Tu H, Yuan G, Zhao C, Liu J, Li F, Yang J, Liao J, Yang Y, Liu N. U-phosphate biomineralization induced by Bacillus sp. dw-2 in the presence of organic acids. NUCLEAR ENGINEERING AND TECHNOLOGY 2019. [DOI: 10.1016/j.net.2019.03.002] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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29
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Mohd S, Kushwaha AS, Shukla J, Mandrah K, Shankar J, Arjaria N, Saxena PN, Khare P, Narayan R, Dixit S, Siddiqui MH, Tuteja N, Das M, Roy SK, Kumar M. Fungal mediated biotransformation reduces toxicity of arsenic to soil dwelling microorganism and plant. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 176:108-118. [PMID: 30925326 DOI: 10.1016/j.ecoenv.2019.03.053] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Revised: 03/11/2019] [Accepted: 03/13/2019] [Indexed: 05/24/2023]
Abstract
Rhizospheric and plant root associated microbes generally play a protective role against arsenic toxicity in rhizosphere. Rhizospheric microbial interaction influences arsenic (As) detoxification/mobilization into crop plants and its level of toxicity and burden. In the present investigation, we have reported a rhizospheric fungi Aspergillus flavus from an As contaminated rice field, which has capability to grow at high As concentration and convert soluble As into As particles. These As particles showed a reduced toxicity to soil dwelling bacteria, fungi, plant and slime mold. It does not disrupt membrane potential, inner/outer membrane integrity and survival of the free N2 fixating bacteria. In arbuscular mycorrhiza like endophytic fungi Piriformospora indica, these As particles does not influence mycelial growth and plant beneficial parameters such as phosphate solubilizing enzyme rAPase secretion and plant root colonization. Similarly, it does not affect plant growth and chlorophyll content negatively in rice plant. However, these As particles showed a poor absorption and mobilization in plant. These As particle also does not affect attachment process and survival of amoeboid cells in slime mold, Dictyostelium discoideum. This study suggests that the process of conversion of physical and chemical properties of arsenic during transformation, decides the toxicity of arsenic particles in the rhizospheric environment. This phenomenon is of environmental significance, not only in reducing arsenic toxicity but also in the survival of healthy living organism in arsenic-contaminated rhizospheric environment.
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Affiliation(s)
- Shayan Mohd
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India; Department of Bioengineering, Faculty of Engineering, Integral University, Dasauli, Kursi Road, Lucknow, 226026, India
| | - Aparna Singh Kushwaha
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR Campus, Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, Uttar Pradesh, India
| | - Jagriti Shukla
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR Campus, Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, Uttar Pradesh, India
| | - Kapil Mandrah
- Regulatory Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR Campus, Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, Uttar Pradesh, India
| | - Jai Shankar
- Electron Microscope Facility, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Nidhi Arjaria
- Electron Microscope Facility, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Prem Narain Saxena
- Electron Microscope Facility, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Puneet Khare
- Flow Cytometry Facility, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Ram Narayan
- Confocal Microscope Facility, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Sumita Dixit
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Mohd Haris Siddiqui
- Department of Bioengineering, Faculty of Engineering, Integral University, Dasauli, Kursi Road, Lucknow, 226026, India
| | - Narendra Tuteja
- International Centre of Genetic Engineering and Biotechnology, Aruna Asif Ali Road, New Delhi, 110067, India
| | - Mukul Das
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India
| | - Somendu Kumar Roy
- Regulatory Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR Campus, Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, Uttar Pradesh, India
| | - Manoj Kumar
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR Campus, Vishvigyan Bhavan, 31, Mahatma Gandhi Marg, Lucknow, 226 001, Uttar Pradesh, India.
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30
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Metagenomics-Guided Survey, Isolation, and Characterization of Uranium Resistant Microbiota from the Savannah River Site, USA. Genes (Basel) 2019; 10:genes10050325. [PMID: 31035394 PMCID: PMC6562407 DOI: 10.3390/genes10050325] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2019] [Revised: 04/19/2019] [Accepted: 04/24/2019] [Indexed: 11/17/2022] Open
Abstract
Despite the recent advancements in culturomics, isolation of the majority of environmental microbiota performing critical ecosystem services, such as bioremediation of contaminants, remains elusive. Towards this end, we conducted a metagenomics-guided comparative assessment of soil microbial diversity and functions present in uraniferous soils relative to those that grew in diffusion chambers (DC) or microbial traps (MT), followed by isolation of uranium (U) resistant microbiota. Shotgun metagenomic analysis performed on the soils used to establish the DC/MT chambers revealed Proteobacterial phyla and Burkholderia genus to be the most abundant among bacteria. The chamber-associated growth conditions further increased their abundances relative to the soils. Ascomycota was the most abundant fungal phylum in the chambers relative to the soils, with Penicillium as the most dominant genus. Metagenomics-based taxonomic findings completely mirrored the taxonomic composition of the retrieved isolates such that the U-resistant bacteria and fungi mainly belonged to Burkholderia and Penicillium species, thus confirming that the chambers facilitated proliferation and subsequent isolation of specific microbiota with environmentally relevant functions. Furthermore, shotgun metagenomic analysis also revealed that the gene classes for carbohydrate metabolism, virulence, and respiration predominated with functions related to stress response, membrane transport, and metabolism of aromatic compounds were also identified, albeit at lower levels. Of major note was the successful isolation of a potentially novel Penicillium species using the MT approach, as evidenced by whole genome sequence analysis and comparative genomic analysis, thus enhancing our overall understanding on the uranium cycling microbiota within the tested uraniferous soils.
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Tu H, Lan T, Yuan G, Zhao C, Liu J, Li F, Yang J, Liao J, Yang Y, Wang D, Liu N. The influence of humic substances on uranium biomineralization induced by Bacillus sp. dwc-2. JOURNAL OF ENVIRONMENTAL RADIOACTIVITY 2019; 197:23-29. [PMID: 30502659 DOI: 10.1016/j.jenvrad.2018.11.010] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2018] [Revised: 11/15/2018] [Accepted: 11/21/2018] [Indexed: 06/09/2023]
Abstract
In this paper, the influence of humic acid (HA) and fulvic acid (FA) on biomineralization behaviour was evaluated. The results showed HA and FA did not obviously inhabit or promote the precipitation of U-phosphate minerals. The data from molecular dynamic simulation indicated that the free energy for the dissociation of uranyl the PO43- -uranyl was 202.49 kJ/mol, which was much larger than that form HA-uranyl (88.3 kJ/mol). These simulated results revealed the less competitiveness of HA and FA with PO43- for uranyl and explained why HA and FA had less impacted on the formation of U-phosphate minerals. However, the influence of HA/FA on the morphology was obvious, the microstructure of the bio-minerals changed from small particles to lamellar stacking structure with the addition of HA or FA. The findings of this study are helpful for us to gain a better understanding natural U-phosphate biomineralization behaviour.
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Affiliation(s)
- Hong Tu
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Tu Lan
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China; CAS Key Laboratory of Nuclear Radiation and Nuclear Energy Techniques, Multidisciplinary Initiative Centre, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing, 100049, PR China.
| | - Guoyuan Yuan
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Changsong Zhao
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Jun Liu
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Feize Li
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Jijun Yang
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Jiali Liao
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Yuanyou Yang
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
| | - Dongqi Wang
- CAS Key Laboratory of Nuclear Radiation and Nuclear Energy Techniques, Multidisciplinary Initiative Centre, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing, 100049, PR China.
| | - Ning Liu
- Key Laboratory of Radiation Physics and Technology (Sichuan University), Ministry of Education, Institute of Nuclear Science and Technology, Sichuan University, Chengdu, 610064, PR China.
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Gorobets S, Gorobets O, Kovalchuk I, Yevzhyk L. Determination of Potential Producers of Biogenic Magnetic Nanoparticles Among the Fungi Representatives of Ascomycota and Basidiomycota Divisions. INNOVATIVE BIOSYSTEMS AND BIOENGINEERING 2018. [DOI: 10.20535/ibb.2018.2.4.147310] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022] Open
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Kang X, Csetenyi L, Gadd GM. Biotransformation of lanthanum by Aspergillus niger. Appl Microbiol Biotechnol 2018; 103:981-993. [PMID: 30443797 PMCID: PMC6373195 DOI: 10.1007/s00253-018-9489-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2018] [Revised: 10/24/2018] [Accepted: 10/27/2018] [Indexed: 12/04/2022]
Abstract
Lanthanum is an important rare earth element and has many applications in modern electronics and catalyst manufacturing. However, there exist several obstacles in the recovery and cycling of this element due to a low average grade in exploitable deposits and low recovery rates by energy-intensive extraction procedures. In this work, a novel method to transform and recover La has been proposed using the geoactive properties of Aspergillus niger. La-containing crystals were formed and collected after A. niger was grown on Czapek-Dox agar medium amended with LaCl3. Energy-dispersive X-ray analysis (EDXA) showed the crystals contained C, O, and La; scanning electron microscopy revealed that the crystals were of a tabular structure with terraced surfaces. X-ray diffraction identified the mineral phase of the sample as La2(C2O4)3·10H2O. Thermogravimetric analysis transformed the oxalate crystals into La2O3 with the kinetics of thermal decomposition corresponding well with theoretical calculations. Geochemical modelling further confirmed that the crystals were lanthanum decahydrate and identified optimal conditions for their precipitation. To quantify crystal production, biomass-free fungal culture supernatants were used to precipitate La. The results showed that the precipitated lanthanum decahydrate achieved optimal yields when the concentration of La was above 15 mM and that 100% La was removed from the system at 5 mM La. Our findings provide a new aspect in the biotransformation and biorecovery of rare earth elements from solution using biomass-free fungal culture systems.
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Affiliation(s)
- Xia Kang
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK
| | - Laszlo Csetenyi
- Concrete Technology Group, Department of Civil Engineering, University of Dundee, Dundee, Scotland, DD1 4HN, UK
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK.
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Bader M, Rossberg A, Steudtner R, Drobot B, Großmann K, Schmidt M, Musat N, Stumpf T, Ikeda-Ohno A, Cherkouk A. Impact of Haloarchaea on Speciation of Uranium-A Multispectroscopic Approach. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:12895-12904. [PMID: 30125086 DOI: 10.1021/acs.est.8b02667] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Haloarchaea represent a predominant part of the microbial community in rock salt, which can serve as host rock for the disposal of high level radioactive waste. However, knowledge is missing about how Haloarchaea interact with radionuclides. Here, we used a combination of spectroscopic and microscopic methods to study the interactions of an extremely halophilic archaeon with uranium, one of the major radionuclides in high level radioactive waste, on a molecular level. The obtained results show that Halobacterium noricense DSM 15987T influences uranium speciation as a function of uranium concentration and incubation time. X-ray absorption spectroscopy reveals the formation of U(VI) phosphate minerals, such as meta-autunite, as the major species at a lower uranium concentration of 30 μM, while U(VI) is mostly associated with carboxylate groups of the cell wall and extracellular polymeric substances at a higher uranium concentration of 85 μM. For the first time, we identified uranium biomineralization in the presence of Halobacterium noricense DSM 15987T cells. These findings highlight the potential importance of Archaea in geochemical cycling of uranium and their role in biomineralization in hypersaline environments, offering new insights into the microbe-actinide interactions in highly saline conditions relevant to the disposal of high-level radioactive waste as well as bioremediation.
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Affiliation(s)
- Miriam Bader
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
| | - André Rossberg
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
| | - Robin Steudtner
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
| | - Björn Drobot
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
- Technische Universität Dresden , Central Radionuclide Laboratory , Zellescher Weg 19 , 01062 Dresden , Germany
| | - Kay Großmann
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
| | - Matthias Schmidt
- Helmholtz Centre for Environmental Research , Department of Isotope Biogeochemistry , Permoserstraße 15 , 04318 Leipzig , Germany
| | - Niculina Musat
- Helmholtz Centre for Environmental Research , Department of Isotope Biogeochemistry , Permoserstraße 15 , 04318 Leipzig , Germany
| | - Thorsten Stumpf
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
| | - Atsushi Ikeda-Ohno
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
| | - Andrea Cherkouk
- Helmholtz-Zentrum Dresden-Rossendorf , Institute of Resource Ecology , Bautzner Landstraße 400 , 01328 Dresden , Germany
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Zhang J, Song H, Chen Z, Liu S, Wei Y, Huang J, Guo C, Dang Z, Lin Z. Biomineralization mechanism of U(VI) induced by Bacillus cereus 12-2: The role of functional groups and enzymes. CHEMOSPHERE 2018; 206:682-692. [PMID: 29783053 DOI: 10.1016/j.chemosphere.2018.04.181] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2018] [Revised: 04/26/2018] [Accepted: 04/29/2018] [Indexed: 06/08/2023]
Abstract
Current studies reveal that the biomineralization of U(VI) by anaerobes normally produces nano-sized U(IV) minerals that can easily re-migrate/re-oxidize, while the biomineralization of U(VI) by aerobes has been constrained because the general mechanism has not yet been fully characterized. The biomineralization of U(VI) by Bacillus cereus 12-2 was investigated in this work. The maximum biosorption capability of intact cells was 448.68 mg U/g biomass (dry weight) at pH 5, while a decrease over 60% was induced when phosphate, amino, and especially carboxyl groups were shielded. X-ray diffraction, electron microscopy, and tracing the concentration of soluble intracellular U(VI) demonstrated that extracellular amorphous uranium particles can directly enter cells as solid, and about 10 nm-sized (NH4)(UO2)PO4·3H2O was formed subsequently. It was also revealed that the biosorption capability was not affected by a high uranium concentration, while biomineralization was inhibited, suggesting that a high concentration of heavy metals may inhibit the enzyme activity involved in biomineralization. Besides, U(VI) could trigger the overexpression of proteins with a molecular weight of 22 kD, including various phosphatases, kinases, and other enzymes that are related to metabolism and stimulus response, which may contribute to the intracellular transformation of U(VI) compounds from amorphous to crystalline phase. Taken together, the immobilization of U(VI) by B. cereus 12-2 contains two major steps: (1) fast immobilization of U(VI) on the cell surface as amorphous compounds, in which the carboxyl groups served as the predominant coordination functional groups and (2) transport of amorphous particles to cells directly and enzyme-related formation of uramphite.
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Affiliation(s)
- Jian Zhang
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
| | - Han Song
- School of Geoscience and Surveying Engineering, China University of Mining & Technology, D11, Xueyuan Road, Haidian District, Beijing 100083, China.
| | - Zhi Chen
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
| | - Shasha Liu
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
| | - Yali Wei
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
| | - Jingyi Huang
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
| | - Chuling Guo
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
| | - Zhi Dang
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
| | - Zhang Lin
- School of Environment and Energy, South China University of Technology, The Key Laboratory of Pollution Control and Ecosystem Restoration in Industry Clusters (Ministry of Education), Guangdong Engineering and Technology Research Center for Environmental Nanomaterials, Guangzhou, Guangdong 510006, China.
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Kolhe N, Zinjarde S, Acharya C. Responses exhibited by various microbial groups relevant to uranium exposure. Biotechnol Adv 2018; 36:1828-1846. [PMID: 30017503 DOI: 10.1016/j.biotechadv.2018.07.002] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2018] [Revised: 07/08/2018] [Accepted: 07/09/2018] [Indexed: 11/28/2022]
Abstract
There is a strong interest in knowing how various microbial systems respond to the presence of uranium (U), largely in the context of bioremediation. There is no known biological role for uranium so far. Uranium is naturally present in rocks and minerals. The insoluble nature of the U(IV) minerals keeps uranium firmly bound in the earth's crust minimizing its bioavailability. However, anthropogenic nuclear reaction processes over the last few decades have resulted in introduction of uranium into the environment in soluble and toxic forms. Microbes adsorb, accumulate, reduce, oxidize, possibly respire, mineralize and precipitate uranium. This review focuses on the microbial responses to uranium exposure which allows the alteration of the forms and concentrations of uranium within the cell and in the local environment. Detailed information on the three major bioprocesses namely, biosorption, bioprecipitation and bioreduction exhibited by the microbes belonging to various groups and subgroups of bacteria, fungi and algae is provided in this review elucidating their intrinsic and engineered abilities for uranium removal. The survey also highlights the instances of the field trials undertaken for in situ uranium bioremediation. Advances in genomics and proteomics approaches providing the information on the regulatory and physiologically important determinants in the microbes in response to uranium challenge have been catalogued here. Recent developments in metagenomics and metaproteomics indicating the ecologically relevant traits required for the adaptation and survival of environmental microbes residing in uranium contaminated sites are also included. A comprehensive understanding of the microbial responses to uranium can facilitate the development of in situ U bioremediation strategies.
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Affiliation(s)
- Nilesh Kolhe
- Institute of Bioinformatics and Biotechnology, Savitribai Phule Pune University, Pune 411007, India; Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India
| | - Smita Zinjarde
- Institute of Bioinformatics and Biotechnology, Savitribai Phule Pune University, Pune 411007, India; Department of Microbiology, Savitribai Phule Pune University, Pune 411007, India.
| | - Celin Acharya
- Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085, India; Homi Bhabha National Institute, Anushakti Nagar, Trombay, Mumbai 400094, India.
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Lopez-Fernandez M, Romero-González M, Günther A, Solari PL, Merroun ML. Effect of U(VI) aqueous speciation on the binding of uranium by the cell surface of Rhodotorula mucilaginosa, a natural yeast isolate from bentonites. CHEMOSPHERE 2018; 199:351-360. [PMID: 29453061 DOI: 10.1016/j.chemosphere.2018.02.055] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2017] [Revised: 02/06/2018] [Accepted: 02/08/2018] [Indexed: 06/08/2023]
Abstract
This study presents the effect of aqueous uranium speciation (U-hydroxides and U-hydroxo-carbonates) on the interaction of this radionuclide with the cells of the yeast Rhodotorula mucigilanosa BII-R8. This strain was isolated from Spanish bentonites considered as reference materials for the engineered barrier components of the future deep geological repository of radioactive waste. X-ray absorption and infrared spectroscopy showed that the aqueous uranium speciation has no effect on the uranium binding process by this yeast strain. The cells bind mobile uranium species (U-hydroxides and U-hydroxo-carbonates) from solution via a time-dependent process initiated by the adsorption of uranium species to carboxyl groups. This leads to the subsequent involvement of organic phosphate groups forming uranium complexes with a local coordination similar to that of the uranyl mineral phase meta-autunite. Scanning transmission electron microscopy with high angle annular dark field analysis showed uranium accumulations at the cell surface associated with phosphorus containing ligands. Moreover, the effect of uranium mobile species on the cell viability and metabolic activity was examined by means of flow cytometry techniques, revealing that the cell metabolism is more affected by higher concentrations of uranium than the cell viability. The results obtained in this work provide new insights on the interaction of uranium with bentonite natural yeast from genus Rhodotorula under deep geological repository relevant conditions.
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Affiliation(s)
| | | | - Alix Günther
- Institute of Resource Ecology, Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany
| | - Pier L Solari
- MARS Beamline, Synchrotron SOLEIL, L'Orme des Merisiers, Saint-Aubin, Gif-sur-Yvette Cedex, France
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Shen Y, Zheng X, Wang X, Wang T. The biomineralization process of uranium(VI) by Saccharomyces cerevisiae - transformation from amorphous U(VI) to crystalline chernikovite. Appl Microbiol Biotechnol 2018; 102:4217-4229. [PMID: 29564524 DOI: 10.1007/s00253-018-8918-4] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Revised: 03/05/2018] [Accepted: 03/06/2018] [Indexed: 11/30/2022]
Abstract
Microorganisms play a significant role in uranium(VI) biogeochemistry and influence U(VI) transformation through biomineralization. In the present work, the process of uranium mineralization was investigated by Saccharomyces cerevisiae. The toxicity experiments showed that the viability of cell was not significantly affected by 100 mg L-1 U(VI) under 4 days of exposure time. The batch experiments showed that the phosphate concentration and pH value increased over time during U(VI) adsorption. Meanwhile, thermodynamic calculations demonstrated that the adsorption system was supersaturated with respect to UO2HPO4. The X-ray powder diffraction spectroscopy (XRD), field emission scanning electron microscopy (FE-SEM) equipped with energy dispersive spectroscopy (EDX), Fourier transform infrared spectroscopy (FTIR), and X-ray photoelectron spectroscopy (XPS) analyses indicated that the U(VI) was first attached onto the cell surface and reacted with hydroxyl, carboxyl, and phosphate groups through electrostatic interactions and complexation. As the immobilization of U(VI) transformed it from the ionic to the amorphous state, lamellar uranium precipitate was formed on the cell surface. With the prolongation of time, the amorphous uranium compound disappeared, and there were some crystalline substances observed extracellularly, which were well-characterized as tetragonal-chernikovite. Furthermore, the size of chernikovite was regulated at nano-level by cells, and the perfect crystal was formed finally. These findings provided an understanding of the non-reductive transformation process of U(VI) from the amorphous to crystalline state within microbe systems, which would be beneficial for the U(VI) treatment and reuse of nuclides and heavy metals.
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Affiliation(s)
- Yanghao Shen
- School of Nuclear Science and Technology, Lanzhou University, Lanzhou, 730000, China
| | - Xinyan Zheng
- School of Nuclear Science and Technology, Lanzhou University, Lanzhou, 730000, China
| | - Xiaoyu Wang
- School of Nuclear Science and Technology, Lanzhou University, Lanzhou, 730000, China
| | - Tieshan Wang
- School of Nuclear Science and Technology, Lanzhou University, Lanzhou, 730000, China.
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Vijayaraghavan R, Ellappan V, Dharmar P, Lakshmanan U. Preferential adsorption of uranium by functional groups of the marine unicellular cyanobacterium Synechococcus elongatus BDU130911. 3 Biotech 2018; 8:170. [PMID: 29556424 DOI: 10.1007/s13205-018-1167-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Accepted: 02/10/2018] [Indexed: 10/17/2022] Open
Abstract
This study reports the surface interaction of the chemically modified marine unicellular cyanobacterium Synechococcus elongatus BDU130911 with uranium. The selective functional groups of the control (dead biomass) for binding with uranium in unicellular marine cyanobacteria were identified as carboxyl groups. The adsorption capacity of the biomass in a 1 mM uranium solution was found to be 92% in the control, 85% in the amine-blocked treatments, and 20% in the carboxyl-blocked treatments. The Langmuir isotherm provided a good fit to the data, suggesting a monolayer of uranium adsorption on all the tested biomass. The functional groups involved in the adsorption of uranium by the control and modified biomass were assessed by Fourier transform infrared spectroscopy, energy dispersive X-ray fluorescence and X-ray diffractive analysis. The results of this study identify, carboxyl groups as the dominant anionic functional group involved in uranium adsorption, which validates an ionic interaction between the biomass and uranium, a cationic metal.
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40
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Hu N, Li K, Sui Y, Ding D, Dai Z, Li D, Wang N, Zhang H. Utilization of phosphate rock as a sole source of phosphorus for uranium biomineralization mediated by Penicillium funiculosum. RSC Adv 2018; 8:13459-13465. [PMID: 35542523 PMCID: PMC9079836 DOI: 10.1039/c8ra01344f] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Accepted: 03/21/2018] [Indexed: 11/29/2022] Open
Abstract
In this work, uranium(vi) biomineralization by soluble ortho-phosphate from decomposition of the phosphate rock powder, a cheap and readily available material, was studied in detail. Penicillium funiculosum was effective in solubilizing P from the phosphate rock powder, and the highest concentration of the dissolved phosphate reached 220 mg L−1 (pH = 6). A yellow precipitate was immediately formed when solutions with different concentrations of uranium were treated with PO43−-containing fermentation broth, and the precipitate was identified as chernikovite by Fourier transform infrared spectroscopy, scanning electron microscope, and X-ray powder diffraction. Our study showed that the concentrations of uranium in solutions can be decreased to the level lower than maximum contaminant limit for water (50 μg L−1) by the Environmental Protection Agency of China when Penicillium funiculosum was incubated for 22 days in the broth containing 5 g L−1 phosphate rock powder. In this work, uranium(vi) biomineralization by soluble ortho-phosphate from decomposition of the phosphate rock powder, a cheap and readily available material, was studied in detail.![]()
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Affiliation(s)
- Nan Hu
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
| | - Ke Li
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
| | - Yang Sui
- Hunan Taohuajiang Nuclear Power Co., Ltd
- Yiyang
- China 413000
| | - Dexin Ding
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
| | - Zhongran Dai
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
| | - Dianxin Li
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
| | - Nieying Wang
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
| | - Hui Zhang
- Key Discipline Laboratory for National Defense for Biotechnology in Uranium Mining and Hydrometallurgy
- University of South China
- Hengyang 421001
- China
- Hunan Province Key Laboratory of Green Development Technology for Extremely Low Grade Uranium Resources
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Liang X, Gadd GM. Metal and metalloid biorecovery using fungi. Microb Biotechnol 2017; 10:1199-1205. [PMID: 28696059 PMCID: PMC5609339 DOI: 10.1111/1751-7915.12767] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2017] [Accepted: 06/13/2017] [Indexed: 01/01/2023] Open
Abstract
Bioleaching is a proven bioprocess for metal recovery by solution from solid matrices, while a bioprecipitation or biomineralization approach is of potential for biorecovery from solution. Fungi can directly and indirectly mediate the formation of many kinds of minerals, including oxides, phosphates, carbonates and oxalates, as well as elemental forms of metals and metalloids such as Ag, Se and Te. Fungal capabilities may offer a potentially useful contribution to biotechnological and physico‐chemical methods for metal recovery.![]()
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Affiliation(s)
- Xinjin Liang
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK
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Abstract
ABSTRACT
Geomicrobiology addresses the roles of microorganisms in geological and geochemical processes, and geomycology is a part of this topic focusing on the fungi. Geoactive roles of fungi include organic and inorganic transformations important in nutrient and element cycling, rock and mineral bioweathering, mycogenic biomineral formation, and metal-fungal interactions. Lichens and mycorrhizas are significant geoactive agents. Organic matter decomposition is important for cycling of major biomass-associated elements, e.g., C, H, N, O, P, and S, as well as all other elements found in lower concentrations. Transformations of metals and minerals are central to geomicrobiology, and fungi affect changes in metal speciation, as well as mediate mineral formation or dissolution. Such mechanisms are components of biogeochemical cycles for metals as well as associated elements in biomass, soil, rocks, and minerals, e.g., S, P, and metalloids. Fungi may have the greatest geochemical influence within the terrestrial environment. However, they are also important in the aquatic environment and are significant components of the deep subsurface, extreme environments, and habitats polluted by xenobiotics, metals, and radionuclides. Applications of geomycology include metal and radionuclide bioleaching, biorecovery, detoxification, bioremediation, and the production of biominerals or metal(loid) elements with catalytic or other properties. Adverse effects include biodeterioration of natural and synthetic materials, rock and mineral-based building materials (e.g., concrete), cultural heritage, metals, alloys, and related substances and adverse effects on radionuclide mobility and containment. The ubiquity and importance of fungi in the biosphere underline the importance of geomycology as a conceptual framework encompassing the environmental activities of fungi.
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Wufuer R, Wei Y, Lin Q, Wang H, Song W, Liu W, Zhang D, Pan X, Gadd GM. Uranium Bioreduction and Biomineralization. ADVANCES IN APPLIED MICROBIOLOGY 2017; 101:137-168. [PMID: 29050665 DOI: 10.1016/bs.aambs.2017.01.003] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
Following the development of nuclear science and technology, uranium contamination has been an ever increasing concern worldwide because of its potential for migration from the waste repositories and long-term contaminated environments. Physical and chemical techniques for uranium pollution are expensive and challenging. An alternative to these technologies is microbially mediated uranium bioremediation in contaminated water and soil environments due to its reduced cost and environmental friendliness. To date, four basic mechanisms of uranium bioremediation-uranium bioreduction, biosorption, biomineralization, and bioaccumulation-have been established, of which uranium bioreduction and biomineralization have been studied extensively. The objective of this review is to provide an understanding of recent developments in these two fields in relation to relevant microorganisms, mechanisms, influential factors, and obstacles.
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Zhao C, Liu J, Li X, Li F, Tu H, Sun Q, Liao J, Yang J, Yang Y, Liu N. Biosorption and bioaccumulation behavior of uranium on Bacillus sp. dwc-2: Investigation by Box-Behenken design method. J Mol Liq 2016. [DOI: 10.1016/j.molliq.2016.05.085] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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Interaction of Uranium with Bacterial Cell Surfaces: Inferences from Phosphatase-Mediated Uranium Precipitation. Appl Environ Microbiol 2016; 82:4965-74. [PMID: 27287317 DOI: 10.1128/aem.00728-16] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Accepted: 05/30/2016] [Indexed: 11/20/2022] Open
Abstract
UNLABELLED Deinococcus radiodurans and Escherichia coli expressing either PhoN, a periplasmic acid phosphatase, or PhoK, an extracellular alkaline phosphatase, were evaluated for uranium (U) bioprecipitation under two specific geochemical conditions (GCs): (i) a carbonate-deficient condition at near-neutral pH (GC1), and (ii) a carbonate-abundant condition at alkaline pH (GC2). Transmission electron microscopy revealed that recombinant cells expressing PhoN/PhoK formed cell-associated uranyl phosphate precipitate under GC1, whereas the same cells displayed extracellular precipitation under GC2. These results implied that the cell-bound or extracellular location of the precipitate was governed by the uranyl species prevalent at that particular GC, rather than the location of phosphatase. MINTEQ modeling predicted the formation of predominantly positively charged uranium hydroxide ions under GC1 and negatively charged uranyl carbonate-hydroxide complexes under GC2. Both microbes adsorbed 6- to 10-fold more U under GC1 than under GC2, suggesting that higher biosorption of U to the bacterial cell surface under GC1 may lead to cell-associated U precipitation. In contrast, at alkaline pH and in the presence of excess carbonate under GC2, poor biosorption of negatively charged uranyl carbonate complexes on the cell surface might have resulted in extracellular precipitation. The toxicity of U observed under GC1 being higher than that under GC2 could also be attributed to the preferential adsorption of U on cell surfaces under GC1. This work provides a vivid description of the interaction of U complexes with bacterial cells. The findings have implications for the toxicity of various U species and for developing biological aqueous effluent waste treatment strategies. IMPORTANCE The present study provides illustrative insights into the interaction of uranium (U) complexes with recombinant bacterial cells overexpressing phosphatases. This work demonstrates the effects of aqueous speciation of U on the biosorption of U and the localization pattern of uranyl phosphate precipitated as a result of phosphatase action. Transmission electron microscopy revealed that location of uranyl phosphate (cell associated or extracellular) was primarily influenced by aqueous uranyl species present under the given geochemical conditions. The data would be useful for understanding the toxicity of U under different geochemical conditions. Since cell-associated precipitation of metal facilitates easy downstream processing by simple gravity-based settling down of metal-loaded cells, compared to cumbersome separation techniques, the results from this study are of considerable relevance to effluent treatment using such cells.
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Characterization of uranium bioaccumulation on a fungal isolate Geotrichum sp. dwc-1 as investigated by FTIR, TEM and XPS. J Radioanal Nucl Chem 2016. [DOI: 10.1007/s10967-016-4797-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Liang X, Csetenyi L, Gadd GM. Uranium bioprecipitation mediated by yeasts utilizing organic phosphorus substrates. Appl Microbiol Biotechnol 2016; 100:5141-51. [PMID: 26846744 DOI: 10.1007/s00253-016-7327-9] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2015] [Revised: 01/12/2016] [Accepted: 01/14/2016] [Indexed: 01/14/2023]
Abstract
In this research, we have demonstrated the ability of several yeast species to mediate U(VI) biomineralization through uranium phosphate biomineral formation when utilizing an organic source of phosphorus (glycerol 2-phosphate disodium salt hydrate (C3H7Na2O6P·xH2O (G2P)) or phytic acid sodium salt hydrate (C6H18O24P6·xNa(+)·yH2O (PyA))) in the presence of soluble UO2(NO3)2. The formation of meta-ankoleite (K2(UO2)2(PO4)2·6(H2O)), chernikovite ((H3O)2(UO2)2(PO4)2·6(H2O)), bassetite (Fe(++)(UO2)2(PO4)2·8(H2O)), and uramphite ((NH4)(UO2)(PO4)·3(H2O)) on cell surfaces was confirmed by X-ray diffraction in yeasts grown in a defined liquid medium amended with uranium and an organic phosphorus source, as well as in yeasts pre-grown in organic phosphorus-containing media and then subsequently exposed to UO2(NO3)2. The resulting minerals depended on the yeast species as well as physico-chemical conditions. The results obtained in this study demonstrate that phosphatase-mediated uranium biomineralization can occur in yeasts supplied with an organic phosphate substrate as sole source of phosphorus. Further understanding of yeast interactions with uranium may be relevant to development of potential treatment methods for uranium waste and utilization of organic phosphate sources and for prediction of microbial impacts on the fate of uranium in the environment.
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Affiliation(s)
- Xinjin Liang
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK
| | - Laszlo Csetenyi
- Concrete Technology Group, Department of Civil Engineering, University of Dundee, Dundee, Scotland, DD1 4HN, UK
| | - Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, Scotland, DD1 5EH, UK.
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Mycoremediation with mycotoxin producers: a critical perspective. Appl Microbiol Biotechnol 2015; 100:17-29. [DOI: 10.1007/s00253-015-7032-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2015] [Revised: 09/08/2015] [Accepted: 09/10/2015] [Indexed: 12/18/2022]
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