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Liang B, Zhang X, Wang F, Miao C, Ji Y, Huang Z, Gu P, Liu X, Fan X, Li Q. Production of polyhydroxyalkanoate by mixed cultivation of Brevundimonas diminuta R79 and Pseudomonas balearica R90. Int J Biol Macromol 2023; 234:123667. [PMID: 36796552 DOI: 10.1016/j.ijbiomac.2023.123667] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 01/31/2023] [Accepted: 02/09/2023] [Indexed: 02/17/2023]
Abstract
The microflora in the activated sludge of propylene oxide saponification wastewater is characterized by a clear succession after enrichment and domestication, and the specifically enriched strains can significantly increase the yield of polyhydroxyalkanoate. In this study, Pseudomonas balearica R90 and Brevundimonas diminuta R79, which are dominant strain after domestication, were selected as models to examine the interactive mechanisms associated with the synthesis of polyhydroxyalkanoate by co-cultured strains. RNA-Seq analysis revealed the up-regulated expression of the acs and phaA genes of strains R79 and R90 in the co-culture group, which enhanced their utilization of acetic acid and synthesis of poly-β-hydroxybutyrate. Cell dry weight and the yield of poly-β-hydroxybutyrate in the co-culture group were accordingly considerably higher than those in the respective pure culture groups. In addition, two-component system, quorum-sensing, flagellar synthesis-related, and chemotaxis-related genes were enriched in strain R90, thereby indicating that compared with the R79 strain, R90 can adapt more rapidly to a domesticated environment. Expression of the acs gene was higher in R79 than in R90, and consequently, strain R79 could more efficiently assimilate acetate in the domesticated environment, and thus predominated in the culture population at the end of the fermentation period.
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Affiliation(s)
- Boya Liang
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Xiujun Zhang
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Fang Wang
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Changfeng Miao
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Yan Ji
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Zhaosong Huang
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Pengfei Gu
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Xiaoli Liu
- Key Laboratory of Marine Biotechnology in Universities of Shandong, School of Life Sciences, Ludong University, Yantai, China
| | - Xiangyu Fan
- School of Biological Science and Technology, University of Jinan, Jinan, China.
| | - Qiang Li
- School of Biological Science and Technology, University of Jinan, Jinan, China.
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2
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Soni S, Chhokar V, Beniwal V, Kumar R, Badgujjar H, Chauhan R, Dudeja S, Kumar A. Cost effective media optimization for PHB production by Bacillus badius MTCC 13004 using the statistical approach. Int J Biol Macromol 2023; 233:123575. [PMID: 36764347 DOI: 10.1016/j.ijbiomac.2023.123575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 02/02/2023] [Accepted: 02/03/2023] [Indexed: 02/11/2023]
Abstract
Polyhydroxybutyrate (PHB) has significant potential for replacing non-biodegradable traditional plastic, which is responsible for several global environmental issues. The main problem with switching to bio-based alternatives for petrochemical plastics is the large price gap on the market. To overcome this problem, the present research was focused on the utilization of inexpensive substrates i.e. agricultural residues for cost-effective PHB production by endospore-forming bacteria Bacillus badius MTCC 13004. For efficient PHB production, Box-Behnken Design (BBD) was selected for media optimization and to observe the interactive effects of four variables i.e. pH, Na acetate, Banana peel, and mustard cake. PHB yield of 2.11 g/L was attained under optimized conditions compared to non-optimized conditions (0.72 g/L). FTIR spectra analysis of PHB extracted from Bacillus badius was found to be similar to commercial PHB. NMR data was also matched with the chemical shift signals CH, CH2, and CH3 of PHB. The melting temperature (Tm) and glass transition temperature (Tg) of PHB from Bacillus badius was found to be 165.14 and 2.68 °C, respectively. Further, PCR protocol was also designed to amplify key enzymes of the PHB synthesis pathway i.e. PHB synthase (phb C gene).
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Affiliation(s)
- Sweeta Soni
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India
| | - Vinod Chhokar
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India
| | - Vikas Beniwal
- Dept. of Microbiology, Central University of Haryana, Mahendergarh 123031, India
| | - Ravinder Kumar
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India
| | - Hemlata Badgujjar
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India
| | - Rohit Chauhan
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India
| | - Shruti Dudeja
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India
| | - Anil Kumar
- Dept. of Bio and Nano Technology, Guru Jambheshwar University of Science & Technology, Hisar 125001, India.
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3
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Bashiri R, Allen B, Shamurad B, Pabst M, Curtis TP, Ofiţeru ID. Looking for lipases and lipolytic organisms in low-temperature anaerobic reactors treating domestic wastewater. WATER RESEARCH 2022; 212:118115. [PMID: 35092910 DOI: 10.1016/j.watres.2022.118115] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 12/22/2021] [Accepted: 01/20/2022] [Indexed: 06/14/2023]
Abstract
Poor lipid degradation limits low-temperature anaerobic treatment of domestic wastewater even when psychrophiles are used. We combined metagenomics and metaproteomics to find lipolytic bacteria and their potential, and actual, cold-adapted extracellular lipases in anaerobic membrane bioreactors treating domestic wastewater at 4 and 15 °C. Of the 40 recovered putative lipolytic metagenome-assembled genomes (MAGs), only three (Chlorobium, Desulfobacter, and Mycolicibacterium) were common and abundant (relative abundance ≥ 1%) in all reactors. Notably, some MAGs that represented aerobic autotrophs contained lipases. Therefore, we hypothesised that the lipases we found are not always associated with exogenous lipid degradation and can have other roles such as polyhydroxyalkanoates (PHA) accumulation/degradation and interference with the outer membranes of other bacteria. Metaproteomics did not provide sufficient proteome coverage for relatively lower abundant proteins such as lipases though the expression of fadL genes, long-chain fatty acid transporters, was confirmed for four genera (Dechloromonas, Azoarcus, Aeromonas and Sulfurimonas), none of which were recovered as putative lipolytic MAGs. Metaproteomics also confirmed the presence of 15 relatively abundant (≥ 1%) genera in all reactors, of which at least 6 can potentially accumulate lipid/polyhydroxyalkanoates. For most putative lipolytic MAGs, there was no statistically significant correlation between the read abundance and reactor conditions such as temperature, phase (biofilm and bulk liquid), and feed type (treated by ultraviolet light or not). Results obtained by metagenomics and metaproteomics did not confirm each other and extracellular lipases and lipolytic bacteria were not easily identifiable in the anaerobic membrane reactors used in this study. Further work is required to identify the true lipid degraders in these systems.
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Affiliation(s)
- Reihaneh Bashiri
- School of Engineering, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, United Kingdom
| | - Ben Allen
- School of Engineering, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, United Kingdom
| | - Burhan Shamurad
- School of Engineering, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, United Kingdom
| | - Martin Pabst
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629HZ Delft, The Netherlands
| | - Thomas P Curtis
- School of Engineering, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, United Kingdom
| | - Irina D Ofiţeru
- School of Engineering, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, United Kingdom.
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4
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Kondratyev V, Goryacheva D, Nepomnyaschiy A, Zubkov I, Shishlyannikov S, Sorokoumov P. Quantitative analysis of medium-chain polyhydroxyalkanoates in bacterial cells via gas chromatography-mass spectrometry: classical method revision and optimization. INTERNATIONAL JOURNAL OF POLYMER ANALYSIS AND CHARACTERIZATION 2021. [DOI: 10.1080/1023666x.2021.1992581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Vadim Kondratyev
- Department of Biotechnology, All-Russia Research Institute for Food Additives — Branch of V.M. Gorbatov Federal Research Center for Food Systems of RAS, St. Petersburg, Russia
| | - Darya Goryacheva
- Department of Biotechnology, All-Russia Research Institute for Food Additives — Branch of V.M. Gorbatov Federal Research Center for Food Systems of RAS, St. Petersburg, Russia
| | - Anatoliy Nepomnyaschiy
- Department of Biotechnology, All-Russia Research Institute for Food Additives — Branch of V.M. Gorbatov Federal Research Center for Food Systems of RAS, St. Petersburg, Russia
| | - Ilya Zubkov
- Department of Biotechnology, All-Russia Research Institute for Food Additives — Branch of V.M. Gorbatov Federal Research Center for Food Systems of RAS, St. Petersburg, Russia
| | - Sergey Shishlyannikov
- Department of Biotechnology, All-Russia Research Institute for Food Additives — Branch of V.M. Gorbatov Federal Research Center for Food Systems of RAS, St. Petersburg, Russia
| | - Pavel Sorokoumov
- Department of Biotechnology, All-Russia Research Institute for Food Additives — Branch of V.M. Gorbatov Federal Research Center for Food Systems of RAS, St. Petersburg, Russia
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De Donno Novelli L, Moreno Sayavedra S, Rene ER. Polyhydroxyalkanoate (PHA) production via resource recovery from industrial waste streams: A review of techniques and perspectives. BIORESOURCE TECHNOLOGY 2021; 331:124985. [PMID: 33819906 DOI: 10.1016/j.biortech.2021.124985] [Citation(s) in RCA: 50] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2020] [Revised: 03/07/2021] [Accepted: 03/09/2021] [Indexed: 06/12/2023]
Abstract
The problem of waste generation in the form of wastewater and solid wastes has caused an urgent, yet persisting, global issue that calls for the development of sustainable treatment and resource recovery technologies. The production of value-added polyhydroxyalkanoates (PHAs) from industrial waste streams has attracted the attention of researchers and process industries because they could replace traditional plastics. PHAs are biopolymers with high degradability, with a variety of applications in the manufacturing sector (e.g. medical equipment, packaging). The aim of this review is to describe the techniques and industrial waste streams that are applied for PHA production. The different enrichment and accumulation techniques that employ mixed microbial communities and carbon recovery from industrial waste streams and various downstream processes were reviewed. PHA yields between 7.6 and 76 wt% were reported for pilot-scale PHA production; while, at the laboratory-scale, yields from PHA accumulation range between 8.6 and 56 wt%. The recent advances in the application of waste streams for PHA production could result in more widely spread PHA production at the industrial scale via its integration into biorefineries for co-generation of PHAs with other added-value products like biohydrogen and biogas.
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Affiliation(s)
- Laura De Donno Novelli
- Department of Water Supply, Sanitation and Environmental Engineering, IHE Delft Institute for Water Education, Westvest 7, 2611AX Delft, The Netherlands
| | - Sarah Moreno Sayavedra
- Department of Water Supply, Sanitation and Environmental Engineering, IHE Delft Institute for Water Education, Westvest 7, 2611AX Delft, The Netherlands
| | - Eldon R Rene
- Department of Water Supply, Sanitation and Environmental Engineering, IHE Delft Institute for Water Education, Westvest 7, 2611AX Delft, The Netherlands.
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6
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Perez-Zabaleta M, Atasoy M, Khatami K, Eriksson E, Cetecioglu Z. Bio-based conversion of volatile fatty acids from waste streams to polyhydroxyalkanoates using mixed microbial cultures. BIORESOURCE TECHNOLOGY 2021; 323:124604. [PMID: 33387708 DOI: 10.1016/j.biortech.2020.124604] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2020] [Revised: 12/18/2020] [Accepted: 12/20/2020] [Indexed: 06/12/2023]
Abstract
Production of polyhydroxyalkanoates is an important field in the biorefinery as bio-alternative to conventional plastics. However, its commercialization is still limited by high production cost. In this study, a process with the potential to reduce the production cost of polyhydroxyalkanoates was proposed. Mixed cultures accumulated polyhydroxyalkanoates using volatile fatty acid-rich effluents from waste streams, without pH and temperature control. In addition, the impact of two types of carbon sources was investigated by analyzing the microbial community as well as the polyhydroxyalkanoate accumulation capacity. Mixed cultures successfully adapted to different substrates, consuming the volatile fatty acids in their totality. The phyla Proteobacteria, Bacteroidetes and Firmicutes dominated the bacterial community. The highest polyhydroxyalkanoate content was 43.5% w/w, which is comparable to contents reported from mixed cultures using synthetic carbon sources. The biopolymer consisted of (R)-3-hydroxybutyrate 94.8 ± 1.7% w/w and (R)-3-hydroxyvaletare 5.2 ± 1.7% w/w.
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Affiliation(s)
- Mariel Perez-Zabaleta
- Department of Chemical Engineering, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden.
| | - Merve Atasoy
- Department of Chemical Engineering, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Kasra Khatami
- Department of Chemical Engineering, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Elsa Eriksson
- Department of Chemical Engineering, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Zeynep Cetecioglu
- Department of Chemical Engineering, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
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Guzik M, Witko T, Steinbüchel A, Wojnarowska M, Sołtysik M, Wawak S. What Has Been Trending in the Research of Polyhydroxyalkanoates? A Systematic Review. Front Bioeng Biotechnol 2020; 8:959. [PMID: 33014998 PMCID: PMC7513618 DOI: 10.3389/fbioe.2020.00959] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 07/24/2020] [Indexed: 12/24/2022] Open
Abstract
Over the past decades, enormous progress has been achieved with regard to research on environmentally friendly polymers. One of the most prominent families of such biopolymers are bacterially synthesized polyhydroxyalkanoates (PHAs) that have been known since the 1920s. However, only as recent as the 1990s have extensive studies sprung out exponentially in this matter. Since then, different areas of exploration of these intriguing materials have been uncovered. However, no systematic review of undertaken efforts has been conducted so far. Therefore, we have performed an unbiased search of up-to-date literature to reveal trending topics in the research of PHAs over the past three decades by data mining of 2,227 publications. This allowed us to identify eight past and current trends in this area. Our study provides a comprehensive review of these trends and speculates where PHA research is heading.
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Affiliation(s)
- Maciej Guzik
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Kraków, Poland
| | - Tomasz Witko
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Kraków, Poland
| | - Alexander Steinbüchel
- Institut für Molekulare Mikrobiologie und Biotechnologie, Westfälische Wilhelms-Universität Münster, Münster, Germany
- Environmental Sciences Department, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Magdalena Wojnarowska
- Department of Product Technology and Ecology, Cracow University of Economics, Kraków, Poland
| | - Mariusz Sołtysik
- Department of Management Process, Cracow University of Economics, Kraków, Poland
| | - Sławomir Wawak
- Department of Management Process, Cracow University of Economics, Kraków, Poland
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8
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Bacillus thermoamylovorans-Related Strain Isolated from High Temperature Sites as Potential Producers of Medium-Chain-Length Polyhydroxyalkanoate (mcl-PHA). Curr Microbiol 2020; 77:3044-3056. [DOI: 10.1007/s00284-020-02118-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Accepted: 07/06/2020] [Indexed: 10/23/2022]
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9
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Yun G, Lee H, Hong Y, Kim S, Daigger GT, Yun Z. The difference of morphological characteristics and population structure in PAO and DPAOgranular sludges. J Environ Sci (China) 2019; 76:388-402. [PMID: 30528031 DOI: 10.1016/j.jes.2018.06.003] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Revised: 06/05/2018] [Accepted: 06/05/2018] [Indexed: 06/09/2023]
Abstract
We examined how long-term operation of anaerobic-oxic and anaerobic-anoxic sequencing batch reactors (SBRs) affects the enhanced biological phosphorus removal (EBPR) performance and sludge characteristics. The microbial characteristics of phosphorus accumulating organism (PAO) and denitrifying PAO (DPAO) sludge were also analyzed through a quantitative analysis of microbial community structure. Compared with the initial stage of operation characterized by unstable EBPR, both PAO and DPAO SBR produced a stable EBPR performance after about 100-day operation. From day 200 days (DPAO SBR) and 250 days (PAO SBR) onward, sludge granulation was observed, and the average granule size of DPAO SBR was approximately 5 times larger than that of PAO SBR. The DPAO granular sludge contained mainly rod-type microbes, whereas the PAO granular sludge contained coccus-type microbes. Fluorescence in situ hybridization analysis revealed that a high ratio of Accumulibacter clade I was found only in DPAO SBR, revealing the important role of this organism in the denitrifying EBPR system. A pyrosequencing analysis showed that Accumulibacter phosphatis was present in PAO sludge at a high proportion of 6%, whereas it rarely observed in DPAO sludge. Dechloromonas was observed in both PAO sludge (3.3%) and DPAO sludge (3.2%), confirming that this organism can use both O2 and NO3- as electron acceptors. Further, Thauera spp. was identified to have a new possibility as denitrifier capable of phosphorous uptake under anoxic condition.
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Affiliation(s)
- Geumhee Yun
- Department of Environmental Engineering, Korea University, Sejong, 339-700, South Korea.
| | - Hansaem Lee
- Hyundai Engineering & Construction Co., Ltd., 17-6 Mabuk-Ro 240, Giheung-Gu, Yongin-Si, Gyuonggi-Do, South Korea
| | - Yongsuk Hong
- Department of Environmental Engineering, Korea University, Sejong, 339-700, South Korea
| | - Sungpyo Kim
- Department of Environmental Engineering, Korea University, Sejong, 339-700, South Korea
| | - Glen T Daigger
- Department of Civil and Environmental Engineering, University of Michigan, 177 EWRE Building, 1351 Beal Avenue, Ann Arbor, MI 48109-2125, USA
| | - Zuwhan Yun
- Department of Environmental Engineering, Korea University, Sejong, 339-700, South Korea.
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Qu D, Zhang F, Gao H, Wang Q, Bai Y, Liu H. Studies on Isosorbide-enhanced Biodegradable Poly(ethylene succinate). Chem Res Chin Univ 2019. [DOI: 10.1007/s40242-019-8227-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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11
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Bonartsev AP, Voinova VV, Bonartseva GA. Poly(3-hydroxybutyrate) and Human Microbiota (Review). APPL BIOCHEM MICRO+ 2018. [DOI: 10.1134/s0003683818060066] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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12
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Burniol-Figols A, Varrone C, Le SB, Daugaard AE, Skiadas IV, Gavala HN. Combined polyhydroxyalkanoates (PHA) and 1,3-propanediol production from crude glycerol: Selective conversion of volatile fatty acids into PHA by mixed microbial consortia. WATER RESEARCH 2018; 136:180-191. [PMID: 29505919 DOI: 10.1016/j.watres.2018.02.029] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Revised: 01/30/2018] [Accepted: 02/12/2018] [Indexed: 06/08/2023]
Abstract
Crude glycerol is an important by-product of the biodiesel industry, which can be converted into volatile fatty acids (VFA) and/or 1,3-propanediol (1,3-PDO) by fermentation. In this study, a selective conversion of VFA to polyhydroxyalkanoates (PHA) was attained while leaving 1,3-PDO in the supernatant by means of mixed microbial consortia selection strategies. The process showed highly reproducible results in terms of PHA yield, 0.99 ± 0.07 Cmol PHA/Cmol S (0.84 g COD PHA/g COD S), PHA content (76 ± 3.1 g PHA/100 g TSS) and 1,3-PDO recovery (99 ± 2.1%). The combined process had an ultimate yield from crude glycerol of 0.19 g COD PHA and 0.42 g COD 1,3-PDO per g of input COD. The novel enrichment strategy applied for selectively transforming fermentation by-products into a high value product (PHA) demonstrates the significance of the enrichment process for targeting specific bio-transformations and could potentially prove valuable for other biotechnological applications as well.
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Affiliation(s)
- Anna Burniol-Figols
- Technical University of Denmark (DTU), Dept. of Chemical and Biochemical Engineering, Søltofts Plads, Building 229, 2800, Kgs. Lyngby, Denmark
| | - Cristiano Varrone
- Technical University of Denmark (DTU), Dept. of Chemical and Biochemical Engineering, Søltofts Plads, Building 229, 2800, Kgs. Lyngby, Denmark
| | - Simone Balzer Le
- SINTEF, Materials and Chemistry, Dept. of Biotechnology and Nanomedicine, Postboks 4760 Torgarden, 7465, Trondheim, Norway
| | - Anders Egede Daugaard
- Technical University of Denmark (DTU), Dept. of Chemical and Biochemical Engineering, Søltofts Plads, Building 229, 2800, Kgs. Lyngby, Denmark
| | - Ioannis V Skiadas
- Technical University of Denmark (DTU), Dept. of Chemical and Biochemical Engineering, Søltofts Plads, Building 229, 2800, Kgs. Lyngby, Denmark
| | - Hariklia N Gavala
- Technical University of Denmark (DTU), Dept. of Chemical and Biochemical Engineering, Søltofts Plads, Building 229, 2800, Kgs. Lyngby, Denmark.
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Li R, Gu P, Fan X, Shen J, Wu Y, Huang L, Li Q. Isolation and Characterization of PHA-Producing Bacteria from Propylene Oxide Saponification Wastewater Residual Sludge. Appl Biochem Biotechnol 2018; 186:233-244. [PMID: 29564736 DOI: 10.1007/s12010-018-2731-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Accepted: 02/27/2018] [Indexed: 11/28/2022]
Abstract
A polyhydroxyalkanoate (PHA)-producing strain was isolated from propylene oxide (PO) saponification wastewater activated sludge and was identified as Brevundimonas vesicularis UJN1 through 16S rDNA sequencing and Biolog microbiological identification. Single-factor and response surface methodology experiments were used to optimize the culture medium and conditions. The optimal C/N ratio was 100/1.04, and the optimal carbon and nitrogen sources were sucrose (10 g/L) and NH4Cl (0.104 g/L) respectively. The optimal culture conditions consisted of initial pH of 6.7 and an incubation temperature of 33.4 °C for 48 h, with 15% inoculum and 100 mL medium at an agitation rate of 180 rpm. The PHA concentration reached 34.1% of the cell dry weight and increased three times compared with that before optimization. The only report of PHA-producing bacteria by Brevundimonas vesicularis showed that the conversion rate of PHAs using glucose as the optimal carbon source was 1.67%. In our research, the conversion rate of PHAs with sucrose as the optimal carbon source was 3.05%, and PHA production using sucrose as the carbon source was much cheaper than that using glucose as the carbon source.
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Affiliation(s)
- Ruirui Li
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Pengfei Gu
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Xiangyu Fan
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Junyu Shen
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Yulian Wu
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Lixuan Huang
- School of Biological Science and Technology, University of Jinan, Jinan, China
| | - Qiang Li
- School of Biological Science and Technology, University of Jinan, Jinan, China.
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14
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Huang L, Chen Z, Wen Q, Zhao L, Lee DJ, Yang L, Wang Y. Insights into Feast-Famine polyhydroxyalkanoate (PHA)-producer selection: Microbial community succession, relationships with system function and underlying driving forces. WATER RESEARCH 2018; 131:167-176. [PMID: 29281810 DOI: 10.1016/j.watres.2017.12.033] [Citation(s) in RCA: 58] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Revised: 12/14/2017] [Accepted: 12/16/2017] [Indexed: 06/07/2023]
Abstract
The Feast-Famine (FF) process has been frequently used to select polyhydroxyalkanoate (PHA)-accumulating mixed cultures (MCs), but there has been little insight into the ecophysiology of the microbial community during the selection process. In three FF systems with well-defined conditions, synchronized variations in higher-order properties of MCs and complicate microbial community succession mainly including enrichment and elimination of non-top competitors and unexpected turnover of top competitors, were observed. Quantification of PHA-accumulating function genes (phaC) revealed that the top competitors maintained the PHA synthesis by playing consecutive roles when the highly dynamic turnover occurred. Due to its specific physiological characteristics during the PHA-accumulating process, Thauera strain OTU 7 was found to be responsible for the fluctuating SVI, which threatened the robustness of the FF system. This trait was also responsible for its later competitive exclusion by the other PHA-producer, Paracoccus strain OTU 1. Deterministic processes dominated the entire FF system, resulting in the inevitable microbial community succession in the acclimation phase and maintenance of the stable PHA-accumulating function in the maturation phase. However, neutral processes, likely caused by predation from bacterial phages, also occurred, which led to the unpredictable temporal dynamics of the top competitors.
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Affiliation(s)
- Long Huang
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Zhiqiang Chen
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Qinxue Wen
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China.
| | - Lizhi Zhao
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Duu-Jong Lee
- Department of Chemical Engineering, National Taiwan University of Science and Technology, Taipei 106, Taiwan; Department of Chemical Engineering, National Taiwan University, Taipei 106, Taiwan
| | - Lian Yang
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Yao Wang
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
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Arshad A, Ashraf B, Ali I, Jamil N. Biosynthesis of polyhydroxyalkanoates from styrene by Enterobacter spp. isolated from polluted environment. ACTA ACUST UNITED AC 2017. [DOI: 10.1007/s11515-017-1446-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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16
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Wang Y, Zhu Y, Gu P, Li Y, Fan X, Song D, Ji Y, Li Q. Biosynthesis of poly (3-hydroxybutyrate-co-3-hydroxyvalerate) by bacterial community from propylene oxide saponification wastewater residual sludge. Int J Biol Macromol 2017; 98:34-38. [DOI: 10.1016/j.ijbiomac.2017.01.106] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2016] [Revised: 01/08/2017] [Accepted: 01/23/2017] [Indexed: 10/20/2022]
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17
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Genome Structure ofBacillus cereustsu1 and Genes Involved in Cellulose Degradation and Poly-3-Hydroxybutyrate Synthesis. INT J POLYM SCI 2017. [DOI: 10.1155/2017/6192924] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
In previous work, we reported on the isolation and genome sequence analysis ofBacillus cereusstrain tsu1 NCBI accession number JPYN00000000. The 36 scaffolds in the assembled tsu1 genome were all aligned withB. cereusB4264 genome with variations. Genes encoding for xylanase and cellulase and the cluster of genes in the poly-3-hydroxybutyrate (PHB) biosynthesis pathway were identified in tsu1 genome. The PHB accumulation inB. cereustsu1 was initially identified using Sudan Black staining and then confirmed using high-performance liquid chromatography. Physical properties of these PHB extracts, when analyzed with Raman spectra and Fourier transform infrared spectroscopy, were found to be comparable to the standard compound. The five PHB genes in tsu1(phaA,phaB,phaR,phaC,andphaP)were cloned and expressed with TOPO cloning, and the recombinant proteins were validated using peptide mapping of in-gel trypsin digestion followed by mass spectrometry analysis. The recombinantE. coliBL21 (DE3) (over)expressingphaCwas found to accumulate PHB particles. The cellulolytic activity of tsu1 was detected using carboxymethylcellulose (CMC) plate Congo red assay and the shift towards low-molecular size forms of CMC revealed by gel permeation chromatography in CMC liquid culture and the identification of a cellulase in the secreted proteome.
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Huang L, Liu C, Liu Y, Jia X. The composition analysis and preliminary cultivation optimization of a PHA-producing microbial consortium with xylose as a sole carbon source. WASTE MANAGEMENT (NEW YORK, N.Y.) 2016; 52:77-85. [PMID: 27021696 DOI: 10.1016/j.wasman.2016.03.020] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2015] [Revised: 03/10/2016] [Accepted: 03/13/2016] [Indexed: 06/05/2023]
Abstract
This work aimed at using xylose as sole substrate, and combining feast-famine process with Nile blue staining as well as denaturing gradient gel electrophoresis (DGGE) analysis to screen polyhydroxyalkanoate (PHA)-producing bacteria from waste activated sludge (WAS). Composition changes of the microbial consortium during domestication were analyzed by DGGE, and the results indicated that there were mainly four classes of bacteria in the final stable system, which were γ-Proteobacteria, Cellvibrio sp., an uncultured bacterium and Pseudomonas sp., respectively. After preliminary optimization, the optimal conditions for the microbial consortium to produce PHA were also obtained as follows: temperature 33°C, pH 8, xylose concentration 2.4g/L, C/N ratio 160 and C/P ratio 125. The final PHA accumulation was up to 31% of dry cell weight (DCW), compared to 23.8% of the original consortia. Though our process is at the very beginning and the PHA yield is relatively low, producing PHA from xylose by using microbial consortia is a promising way to save the PHA production cost.
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Affiliation(s)
- Luokun Huang
- Department of Biological Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, PR China
| | - Chang Liu
- Department of Biological Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, PR China
| | - Yingjie Liu
- Department of Biological Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, PR China
| | - Xiaoqiang Jia
- Department of Biological Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, PR China; Key Laboratory of Systems Bioengineering (Tianjin University), Ministry of Education, Tianjin 300072, PR China; Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300072, PR China.
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19
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Recent developments and future prospects on bio-based polyesters derived from renewable resources: A review. Int J Biol Macromol 2016; 82:1028-40. [DOI: 10.1016/j.ijbiomac.2015.10.040] [Citation(s) in RCA: 152] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2015] [Revised: 10/07/2015] [Accepted: 10/13/2015] [Indexed: 02/08/2023]
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Unveiling PHA-storing populations using molecular methods. Appl Microbiol Biotechnol 2015; 99:10433-46. [DOI: 10.1007/s00253-015-7010-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Revised: 09/10/2015] [Accepted: 09/14/2015] [Indexed: 10/23/2022]
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21
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Zhang J, Li J, Tang Y, Lin L, Long M. Advances in catalytic production of bio-based polyester monomer 2,5-furandicarboxylic acid derived from lignocellulosic biomass. Carbohydr Polym 2015; 130:420-8. [DOI: 10.1016/j.carbpol.2015.05.028] [Citation(s) in RCA: 104] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2014] [Revised: 05/11/2015] [Accepted: 05/12/2015] [Indexed: 11/16/2022]
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Priester JH, Van De Werfhorst LC, Ge Y, Adeleye AS, Tomar S, Tom LM, Piceno YM, Andersen GL, Holden PA. Effects of TiO2 and Ag nanoparticles on polyhydroxybutyrate biosynthesis by activated sludge bacteria. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2014; 48:14712-14720. [PMID: 25409530 DOI: 10.1021/es504117x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Manufactured nanomaterials (MNMs) are increasingly incorporated into consumer products that are disposed into sewage. In wastewater treatment, MNMs adsorb to activated sludge biomass where they may impact biological wastewater treatment performance, including nutrient removal. Here, we studied MNM effects on bacterial polyhydroxyalkanoate (PHA), specifically polyhydroxybutyrate (PHB), biosynthesis because of its importance to enhanced biological phosphorus (P) removal (EBPR). Activated sludge was sampled from an anoxic selector of a municipal wastewater treatment plant (WWTP), and PHB-containing bacteria were concentrated by density gradient centrifugation. After starvation to decrease intracellular PHB stores, bacteria were nutritionally augmented to promote PHB biosynthesis while being exposed to either MNMs (TiO2 or Ag) or to Ag salts (each at a concentration of 5 mg L(-1)). Cellular PHB concentration and PhyloChip community composition were analyzed. The final bacterial community composition differed from activated sludge, demonstrating that laboratory enrichment was selective. Still, PHB was synthesized to near-activated sludge levels. Ag salts altered final bacterial communities, although MNMs did not. PHB biosynthesis was diminished with Ag (salt or MNMs), indicating the potential for Ag-MNMs to physiologically impact EBPR through the effects of dissolved Ag ions on PHB producers.
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Affiliation(s)
- John H Priester
- Bren School of Environmental Science & Management, Earth Research Institute, and UC Center for the Environmental Implications of Nanotechnology (UC CEIN), University of California , Santa Barbara, Santa Barbara, California 93106, United States
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