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Schwenck LDC, Abreu PA, Nunes-da-Fonseca R. Spider's Silk as a Potential Source of Antibiotics: An Integrative Review. Probiotics Antimicrob Proteins 2024; 16:1608-1622. [PMID: 38460106 DOI: 10.1007/s12602-024-10241-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/27/2024] [Indexed: 03/11/2024]
Abstract
Spiders produce webs, which are still a largely unexplored source of antibacterial compounds, although the reports of its application in the medical field. Therefore, this study aims to present an integrative review of the antibacterial activity of spider webs. The research was conducted using Google Scholar, Scielo, Web of Science, PubMed, ScienceDirect, Medline EBSCO, LILACS, and Embase. The inclusion criteria were original articles written in English that studied the antibiotic properties of the web or isolated compounds tested. The studies were compared according to the spider species studied, the type of web, treatment of the sample, type of antimicrobial test, and the results obtained. Nine hundred and seventy-three publications were found, and after applying the inclusion and exclusion criteria, sixteen articles were selected. Bacterial inhibition was found in seven studies against various species of bacteria such as Escherichia coli, Klebsiella pneumoniae, Staphylococcus aureus, Salmonella Typhi, Bacillus megaterium, Listeria monocytogenes, Acinetobacter baumannii, Streptococcus pneumoniae, Pasteurella multocida, and Bacillus subtilis. Additionally, there was no apparent relationship between the proximity of the spider species evaluated in the studies and the presence or absence of activity. Methodological problems detected may affected the reproducibility and reliability of the results in some studies, such as the lack of description of the web or microorganism strain, as well as the absence of adequate controls and treatments to sterilize the sample. Spider webs can be a valuable source of antibiotics; however, more studies are needed to confirm the real activity of the web or components involved.
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Affiliation(s)
- Lucas da Costa Schwenck
- Instituto de Biodiversidade e Sustentabilidade-NUPEM, Universidade Federal do Rio de Janeiro (UFRJ), Av. São José do Barreto, 764, Macaé, Rio de Janeiro, CEP: 27920-560, Brazil
| | - Paula Alvarez Abreu
- Instituto de Biodiversidade e Sustentabilidade-NUPEM, Universidade Federal do Rio de Janeiro (UFRJ), Av. São José do Barreto, 764, Macaé, Rio de Janeiro, CEP: 27920-560, Brazil
| | - Rodrigo Nunes-da-Fonseca
- Instituto de Biodiversidade e Sustentabilidade-NUPEM, Universidade Federal do Rio de Janeiro (UFRJ), Av. São José do Barreto, 764, Macaé, Rio de Janeiro, CEP: 27920-560, Brazil.
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de Miranda GS, Kulkarni SS, Tagliatela J, Baker CM, Giupponi APL, Labarque FM, Gavish-Regev E, Rix MG, Carvalho LS, Fusari LM, Harvey MS, Wood HM, Sharma PP. The Rediscovery of a Relict Unlocks the First Global Phylogeny of Whip Spiders (Amblypygi). Syst Biol 2024; 73:495-505. [PMID: 38733598 DOI: 10.1093/sysbio/syae021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 02/20/2024] [Accepted: 05/05/2024] [Indexed: 05/13/2024] Open
Abstract
Asymmetrical rates of cladogenesis and extinction abound in the tree of life, resulting in numerous minute clades that are dwarfed by larger sister groups. Such taxa are commonly regarded as phylogenetic relicts or "living fossils" when they exhibit an ancient first appearance in the fossil record and prolonged external morphological stasis, particularly in comparison to their more diversified sister groups. Due to their special status, various phylogenetic relicts tend to be well-studied and prioritized for conservation. A notable exception to this trend is found within Amblypygi ("whip spiders"), a visually striking order of functionally hexapodous arachnids that are notable for their antenniform first walking leg pair (the eponymous "whips"). Paleoamblypygi, the putative sister group to the remaining Amblypygi, is known from Late Carboniferous and Eocene deposits but is survived by a single living species, Paracharon caecusHansen (1921), that was last collected in 1899. Due to the absence of genomic sequence-grade tissue for this vital taxon, there is no global molecular phylogeny for Amblypygi to date, nor a fossil-calibrated estimation of divergences within the group. Here, we report a previously unknown species of Paleoamblypygi from a cave site in Colombia. Capitalizing upon this discovery, we generated the first molecular phylogeny of Amblypygi, integrating ultraconserved element sequencing with legacy Sanger datasets and including described extant genera. To quantify the impact of sampling Paleoamblypygi on divergence time estimation, we performed in silico experiments with pruning of Paracharon. We demonstrate that the omission of relicts has a significant impact on the accuracy of node dating approaches that outweighs the impact of excluding ingroup fossils, which bears upon the ancestral range reconstruction for the group. Our results underscore the imperative for biodiversity discovery efforts in elucidating the phylogenetic relationships of "dark taxa," and especially phylogenetic relicts in tropical and subtropical habitats. The lack of reciprocal monophyly for Charontidae and Charinidae leads us to subsume them into one family, Charontidae, new synonymy.
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Affiliation(s)
- Gustavo S de Miranda
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, 10th and Constitution Ave. NW, Washington, DC 20560, USA
| | - Siddharth S Kulkarni
- Department of Integrative Biology, University of Wisconsin-Madison, 430 Lincoln Drive, Madison, WI 53706, USA
| | - Jéssica Tagliatela
- Departamento de Ecologia e Biologia Evolutiva, Universidade Federal de São Carlos, Campus São Carlos, Rodovia Washington Luís, Km 235, 13565-905 São Paulo, Brazil
| | - Caitlin M Baker
- Department of Integrative Biology, University of Wisconsin-Madison, 430 Lincoln Drive, Madison, WI 53706, USA
| | - Alessandro P L Giupponi
- Lab. de Carrapatos e outros Vetores Ápteros LAC - CAVAISC; IOC - FIOCRUZ, Rio de Janeiro, Brazil
| | - Facundo M Labarque
- Departamento de Ecologia e Biologia Evolutiva, Universidade Federal de São Carlos, Campus São Carlos, Rodovia Washington Luís, Km 235, 13565-905 São Paulo, Brazil
| | - Efrat Gavish-Regev
- National Natural History Collections, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - Michael G Rix
- Biodiversity and Geosciences Program, Queensland Museum, South Brisbane, QLD 4101, Australia
| | - Leonardo S Carvalho
- Campus Amílcar Ferreira Sobral, Universidade Federal do Piauí, 64808-605 Floriano, PI, Brazil
| | - Lívia Maria Fusari
- Departamento de Hidrobiologia, Universidade Federal de São Carlos, campus São Carlos, Rodovia Washington Luís, Km 235, 13565-905 São Paulo, Brazil
| | - Mark S Harvey
- Collections and Research Centre, Western Australian Museum, Welshpool, WA 6106, Australia
- School of Biological Sciences, The University of Western Australia, Crawley, WA 6009, Australia
| | - Hannah M Wood
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, 10th and Constitution Ave. NW, Washington, DC 20560, USA
| | - Prashant P Sharma
- Department of Integrative Biology, University of Wisconsin-Madison, 430 Lincoln Drive, Madison, WI 53706, USA
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Padilla-Villavicencio M, Corzo G, Guillén-Navarro K, Ibarra-Núñez G, Arenas I, Zamudio F, Diego-García E. Cupiennius spiders (Trechaleidae) from southern Mexico: DNA barcoding, venomics, and biological effect. J Venom Anim Toxins Incl Trop Dis 2024; 30:e20230098. [PMID: 39161647 PMCID: PMC11333084 DOI: 10.1590/1678-9199-jvatitd-2023-0098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Accepted: 07/05/2024] [Indexed: 08/21/2024] Open
Abstract
Background Members of the genus Cupiennius Simon, 1891 are categorized as wandering spiders and are part of the family Trechaleidae. The genomics and proteomics of Cupiennius spiders from North America remain uncharacterized. The present study explores for the first time molecular data from the endemic species Cupiennius chiapanensis Medina, 2006, and also presents new data for Cupiennius salei (Keyserling, 1878), both collected in southern Mexico. Methods In total, 88 Cupiennius specimens were collected from southern Mexico and morphologically identified. DNA was extracted and the mitochondrial COI fragment was amplified. COI sequences were analyzed, and a phylogenetic tree was inferred for species from the Americas. Genetic diversity was analyzed using haplotype networks and gene distances. Venom was obtained from C. chiapanensis and C. salei by electrostimulation. The venom was separated by HPLC, visualized using SDS-PAGE, and quantified for use in toxicity bioassays in mice and insects. Results Analysis of COI sequences from C. chiapanensis showed 94% identity with C. salei, while C. salei exhibited 94-97% identity with sequences from Central and South American conspecifics. The venom from C. chiapanensis exhibited toxic activity against crickets. Venoms from C. chiapanensis and C. salei caused death in Anastrepha obliqua flies. Analysis of venom fractions from C. salei and C. chiapanensis revealed molecular masses of a similar size as some previously reported toxins and neurotoxic components. We determined the amino acid sequences of ChiaTx1 and ChiaTx2, toxins that are reported here for the first time and which showed toxicity against mice and insects. Conclusion Our work is the first to report COI-based DNA barcoding sequences from southern Mexican Cupiennius spiders. Compounds with toxic activity were identified in venom from both species.
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Affiliation(s)
| | - Gerardo Corzo
- Departamento de Medicina Molecular, Instituto de Biotecnología,
Universidad Nacional Autónoma de México (Unam), Cuernavaca, Morelos, Mexico
| | - Karina Guillén-Navarro
- El Colegio de la Frontera Sur (ECOSUR), Grupo Académico de
Biotecnología Ambiental, Tapachula, Chiapas, Mexico
| | - Guillermo Ibarra-Núñez
- El Colegio de la Frontera Sur (ECOSUR), Colección de Arácnidos del
Sureste de México, Grupo Académico de Biología y Ecología de Artrópodos Benéficos,
Tapachula, Chiapas, Mexico
| | - Iván Arenas
- Departamento de Medicina Molecular, Instituto de Biotecnología,
Universidad Nacional Autónoma de México (Unam), Cuernavaca, Morelos, Mexico
| | - Fernando Zamudio
- Departamento de Medicina Molecular, Instituto de Biotecnología,
Universidad Nacional Autónoma de México (Unam), Cuernavaca, Morelos, Mexico
| | - Elia Diego-García
- El Colegio de la Frontera Sur (ECOSUR), Grupo Académico de
Biotecnología Ambiental, Tapachula, Chiapas, Mexico
- Programa Investigadoras e Investigadores por México del CONAHCyT -
El Colegio de la Frontera, Mexico City, Mexico
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Adrián-Serrano S, Pavlek M, Arnedo MA. A targeted gene phylogenetic framework to investigate diversification in the highly diverse yet geographically restricted red devil spiders (Araneae, Dysderidae). Cladistics 2024. [PMID: 39105704 DOI: 10.1111/cla.12595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 06/12/2024] [Accepted: 07/10/2024] [Indexed: 08/07/2024] Open
Abstract
The family Dysderidae is a highly diverse group of nocturnal ground-dwelling and active-hunter spiders. Dysderids are mostly restricted to the Western Palearctic, and particularly rich and abundant around the Mediterranean region. Interestingly, the distribution of species richness among its 24 genera and three subfamilies is highly biased-80% of its 644 documented species belong to just two genera, Dysdera (326) and Harpactea (211). Dysderidae provides an excellent study case for evolutionary and ecological research. It includes cases of trophic specialization, which are uncommon among spiders, and exhibit other remarkable biological (e.g. holocentric chromosomes), behavioural (e.g. cryptic female choice), evolutionary (e.g. adaptive radiation) and ecological features (e.g. recurrent colonization of the subterranean environment). The lack of a quantitative hypothesis on its phylogenetic structure has hampered its potential as a testing ground for evolutionary, biogeographical and ecological hypotheses. Here, we present the results of a target, multi-locus phylogenetic analysis, using mitochondrial (cox1, 16s and 12s) and nuclear genes (h3, 28s and 18s), of the most exhaustive taxonomic sample within Dysderidae (104 spp.) to date and across related families (Synspermiata) (83 spp.). We estimate divergence times using a combination of fossil and biogeographic node calibrations and use this timeline to identify shifts in diversification rates. Our results support the monophyly of the Dysderidae subfamilies Rhodinae and Dysderinae but reject Harpacteinae as currently defined. Moreover, the clades recovered within Harpacteinae do not support its current taxonomy. The origin of the family most likely post-dated the break-up of Pangea, and cave colonization may be older than previously considered. After correcting for the taxonomic artefacts, we identified a significant shift in diversification rates at the base of the genus Dysdera. Although the unique coexistence of specialist and generalist diets within the lineage could be suggested as the potential driver for the rate acceleration, further quantitative analyses would be necessary to test this hypothesis.
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Affiliation(s)
- Silvia Adrián-Serrano
- Departament Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain
| | - Martina Pavlek
- Departament Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain
- Ruđer Bošković Institute, Bijenička cesta 54, Zagreb, Croatia
- Croatian Biospeleological Society, Roosveltov trg 6, Zagreb, Croatia
| | - Miquel A Arnedo
- Departament Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain
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Wolff JO, Kennedy SR, Houghton M, Pascoe P, Gajski D, Derkarabetian S, Fraser C, Krehenwinkel H, Renault D. Infrequent Long-Range Dispersal and Evolution of a Top Terrestrial Arthropod Predator in the Sub-Antarctic. Am Nat 2024; 204:191-199. [PMID: 39008836 DOI: 10.1086/730827] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/17/2024]
Abstract
AbstractThe sub-Antarctic terrestrial ecosystems survive on isolated oceanic islands in the path of circumpolar currents and winds that have raged for more than 30 million years and are shaped by climatic cycles that surpass the tolerance limits of many species. Surprisingly little is known about how these ecosystems assembled their native terrestrial fauna and how such processes have changed over time. Here, we demonstrate the patterns and timing of colonization and speciation in the largest and dominant arthropod predators in the eastern sub-Antarctic: spiders of the genus Myro. Our results indicate that this lineage originated from Australia before the Plio-Pleistocenic glacial cycles and underwent an adaptive radiation on the Crozet archipelago, from where one native species colonized multiple remote archipelagos via the Antarctic circumpolar current across thousands of kilometers. The results indicate limited natural connectivity between terrestrial macroinvertebrate faunas in the eastern sub-Antarctic and partial survival of repeated glaciations in the Plio-Pleistocene. Furthermore, our findings highlight that by integrating arthropod taxa from multiple continents, the climatically more stable volcanic Crozet archipelago played a critical role in the evolution and distribution of arthropod life in the sub-Antarctic.
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Cardoso P, Arnedo MA, Macías-Hernández N, Carvalho WD, Carvalho JC, Hilário R. Optimal inventorying and monitoring of taxonomic, phylogenetic and functional diversity. PLoS One 2024; 19:e0307156. [PMID: 39083565 PMCID: PMC11290677 DOI: 10.1371/journal.pone.0307156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Accepted: 07/02/2024] [Indexed: 08/02/2024] Open
Abstract
Comparable data is essential to understand biodiversity patterns. While assemblage or community inventorying requires comprehensive sampling, monitoring focuses on as few components as possible to detect changes. Quantifying species, their evolutionary history, and the way they interact requires studying changes in taxonomic (TD), phylogenetic (PD) and functional diversity (FD). Here we propose a method for the optimization of sampling protocols for inventorying and monitoring assemblages or communities across these three diversity dimensions taking sampling costs into account. We used Iberian spiders and Amazonian bats as two case-studies. The optimal combination of methods for inventorying and monitoring required optimizing the accumulation curve of α-diversity and minimizing the difference between sampled and estimated β-diversity (bias), respectively. For Iberian spiders, the optimal combination for TD, PD and FD allowed sampling at least 50% of estimated diversity with 24 person-hours of fieldwork. The optimal combination of six person-hours allowed reaching a bias below 8% for all dimensions. For Amazonian bats, surveying all the 12 sites with mist-nets and 0 or 1 acoustic recorders was the optimal combination for almost all diversity types, resulting in >89% of the diversity and <10% bias with roughly a third of the cost. Only for phylogenetic α-diversity, the best solution was less clear and involved surveying both with mist nets and acoustic recorders. The widespread use of optimized and standardized sampling protocols and regular repetition in time will radically improve global inventory and monitoring of biodiversity. We strongly advocate for the global adoption of sampling protocols for both inventory and monitoring of taxonomic, phylogenetic and functional diversity.
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Affiliation(s)
- Pedro Cardoso
- Centre for Ecology, Evolution and Environmental Changes (cE3c) & CHANGE—Global Change and Sustainability Institute, University of Lisbon, Lisboa, Portugal
- Laboratory for Integrative Biodiversity Research (LIBRe), Finnish Museum of Natural History (Luomus), University of Helsinki, Helsinki, Finland
| | - Miquel A. Arnedo
- Department of Evolutionary Biology, Ecology & Environmental Sciences, and Biodiversity Research Institute (IRBio), Universitat de Barcelona, Barcelona, Spain
| | - Nuria Macías-Hernández
- Laboratory for Integrative Biodiversity Research (LIBRe), Finnish Museum of Natural History (Luomus), University of Helsinki, Helsinki, Finland
- Department of Animal Biology, Edaphology and Geology, University of Laguna, La Laguna, Canary Islands, Spain
| | - William D. Carvalho
- Facultad de Ciencias, Departamento de Ecología, Terrestrial Ecology Group (TEG-UAM), Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
- Associação Mata Ciliar, Jundiaí, Brazil
- Programa de Pós-Graduação em Biodiversidade Tropical, Universidade Federal do Amapá (UNIFAP), Macapá, Brazil
| | - José C. Carvalho
- Centre for Ecology, Evolution and Environmental Changes (cE3c) & CHANGE—Global Change and Sustainability Institute, University of Lisbon, Lisboa, Portugal
| | - Renato Hilário
- Programa de Pós-Graduação em Biodiversidade Tropical, Universidade Federal do Amapá (UNIFAP), Macapá, Brazil
- Department of Environment and Development, Laboratory of Ecology, Federal University of Macapá, Macapá, Brazil
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Miles LS, Waterman H, Ayoub NA, Garb JE, Haney RA, Rosenberg MS, Krabbenhoft TJ, Verrelli BC. Insight into the adaptive role of arachnid genome-wide duplication through chromosome-level genome assembly of the Western black widow spider. J Hered 2024; 115:241-252. [PMID: 38567866 DOI: 10.1093/jhered/esae018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 03/19/2024] [Indexed: 05/12/2024] Open
Abstract
Although spiders are one of the most diverse groups of arthropods, the genetic architecture of their evolutionary adaptations is largely unknown. Specifically, ancient genome-wide duplication occurring during arachnid evolution ~450 mya resulted in a vast assembly of gene families, yet the extent to which selection has shaped this variation is understudied. To aid in comparative genome sequence analyses, we provide a chromosome-level genome of the Western black widow spider (Latrodectus hesperus)-a focus due to its silk properties, venom applications, and as a model for urban adaptation. We used long-read and Hi-C sequencing data, combined with transcriptomes, to assemble 14 chromosomes in a 1.46 Gb genome, with 38,393 genes annotated, and a BUSCO score of 95.3%. Our analyses identified high repetitive gene content and heterozygosity, consistent with other spider genomes, which has led to challenges in genome characterization. Our comparative evolutionary analyses of eight genomes available for species within the Araneoidea group (orb weavers and their descendants) identified 1,827 single-copy orthologs. Of these, 155 exhibit significant positive selection primarily associated with developmental genes, and with traits linked to sensory perception. These results support the hypothesis that several traits unique to spiders emerged from the adaptive evolution of ohnologs-or retained ancestrally duplicated genes-from ancient genome-wide duplication. These comparative spider genome analyses can serve as a model to understand how positive selection continually shapes ancestral duplications in generating novel traits today within and between diverse taxonomic groups.
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Affiliation(s)
- Lindsay S Miles
- Center for Biological Data Science, Virginia Commonwealth University, Richmond, VA, United States
- Department of Entomology, Virginia Polytechnic Institute and State University, Blacksburg, VA, United States
| | - Hannah Waterman
- Department of Biological Sciences and Research and Education in Energy, Environment, and Water Institute, University at Buffalo, Buffalo, NY, United States
| | - Nadia A Ayoub
- Department of Biology, Washington and Lee University, Lexington, VA, United States
| | - Jessica E Garb
- Department of Biological Sciences, University of Massachusetts Lowell, Lowell, MA, United States
| | - Robert A Haney
- Department of Biology, Ball State University, Muncie, IN, United States
| | - Michael S Rosenberg
- Center for Biological Data Science, Virginia Commonwealth University, Richmond, VA, United States
| | - Trevor J Krabbenhoft
- Department of Biological Sciences and Research and Education in Energy, Environment, and Water Institute, University at Buffalo, Buffalo, NY, United States
| | - Brian C Verrelli
- Center for Biological Data Science, Virginia Commonwealth University, Richmond, VA, United States
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Lo YY, Cheng RC, Lin CP. Integrative species delimitation and five new species of lynx spiders (Araneae, Oxyopidae) in Taiwan. PLoS One 2024; 19:e0301776. [PMID: 38722906 PMCID: PMC11081396 DOI: 10.1371/journal.pone.0301776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Accepted: 03/21/2024] [Indexed: 05/13/2024] Open
Abstract
An accurate assessment of species diversity is a cornerstone of biology and conservation. The lynx spiders (Araneae: Oxyopidae) represent one of the most diverse and widespread cursorial spider groups, however their species richness in Asia is highly underestimated. In this study, we revised species diversity with extensive taxon sampling in Taiwan and explored species boundaries based on morphological traits and genetic data using a two-step approach of molecular species delimitation. Firstly, we employed a single COI dataset and applied two genetic distance-based methods: ABGD and ASAP, and two topology-based methods: GMYC and bPTP. Secondly, we further analyzed the lineages that were not consistently delimited, and incorporated H3 to the dataset for a coalescent-based analysis using BPP. A total of eight morphological species were recognized, including five new species, Hamataliwa cordivulva sp. nov., Hamat. leporauris sp. nov., Tapponia auriola sp. nov., T. parva sp. nov. and T. rarobulbus sp. nov., and three newly recorded species, Hamadruas hieroglyphica (Thorell, 1887), Hamat. foveata Tang & Li, 2012 and Peucetia latikae Tikader, 1970. All eight morphological species exhibited reciprocally monophyletic lineages. The results of molecular-based delimitation analyses suggested a variety of species hypotheses that did not fully correspond to the eight morphological species. We found that Hamat. cordivulva sp. nov. and Hamat. foveata showed shallow genetic differentiation in the COI, but they were unequivocally distinguishable according to their genitalia. In contrast, T. parva sp. nov. represented a deep divergent lineage, while differences of genitalia were not detected. This study highlights the need to comprehensively employ multiple evidence and methods to delineate species boundaries and the values of diagnostic morphological characters for taxonomic studies in lynx spiders.
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Affiliation(s)
- Ying-Yuan Lo
- Department of Life Science, National Taiwan Normal University, Taipei, Taiwan
- Wild Animals Division, Biodiversity Research Institute, Nantou, Taiwan
| | - Ren-Chung Cheng
- Department of Life Sciences, National Chung Hsing University, Taichung, Taiwan
- Research Center for Global Change Biology, National Chung Hsing University, Taichung, Taiwan
| | - Chung-Ping Lin
- Department of Life Science, National Taiwan Normal University, Taipei, Taiwan
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Gajski D, Wolff JO, Melcher A, Weber S, Prost S, Krehenwinkel H, Kennedy SR. Facilitating taxonomy and phylogenetics: An informative and cost-effective protocol integrating long amplicon PCRs and third-generation sequencing. Mol Phylogenet Evol 2024; 192:107988. [PMID: 38072140 DOI: 10.1016/j.ympev.2023.107988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Revised: 10/22/2023] [Accepted: 12/07/2023] [Indexed: 12/31/2023]
Abstract
Phylogenetic inference has become a standard technique in integrative taxonomy and systematics, as well as in biogeography and ecology. DNA barcodes are often used for phylogenetic inference, despite being strongly limited due to their low number of informative sites. Also, because current DNA barcodes are based on a fraction of a single, fast-evolving gene, they are highly unsuitable for resolving deeper phylogenetic relationships due to saturation. In recent years, methods that analyse hundreds and thousands of loci at once have improved the resolution of the Tree of Life, but these methods require resources, experience and molecular laboratories that most taxonomists do not have. This paper introduces a PCR-based protocol that produces long amplicons of both slow- and fast-evolving unlinked mitochondrial and nuclear gene regions, which can be sequenced by the affordable and portable ONT MinION platform with low infrastructure or funding requirements. As a proof of concept, we inferred a phylogeny of a sample of 63 spider species from 20 families using our proposed protocol. The results were overall consistent with the results from approaches based on hundreds and thousands of loci, while requiring just a fraction of the cost and labour of such approaches, making our protocol accessible to taxonomists worldwide.
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Affiliation(s)
- Domagoj Gajski
- Department of Biogeography, Faculty of Spatial and Environmental Sciences, University of Trier, Universitätsring 15, Trier 54296, Germany; Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, Brno 611 37, Czech Republic
| | - Jonas O Wolff
- Evolutionary Biomechanics, Zoological Institute and Museum, University of Greifswald, Loitzer Str. 26, Greifswald 17489, Germany; School of Natural Sciences, Macquarie University, NSW 2109, Sydney, Australia
| | - Anja Melcher
- Department of Biogeography, Faculty of Spatial and Environmental Sciences, University of Trier, Universitätsring 15, Trier 54296, Germany
| | - Sven Weber
- Department of Biogeography, Faculty of Spatial and Environmental Sciences, University of Trier, Universitätsring 15, Trier 54296, Germany
| | - Stefan Prost
- Ecology and Genetics Research Unit, University of Oulu, Pentti Kaiteran katu 1, Linnanmaa, Finland
| | - Henrik Krehenwinkel
- Department of Biogeography, Faculty of Spatial and Environmental Sciences, University of Trier, Universitätsring 15, Trier 54296, Germany
| | - Susan R Kennedy
- Department of Biogeography, Faculty of Spatial and Environmental Sciences, University of Trier, Universitätsring 15, Trier 54296, Germany.
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Castellucci F, Luchetti A, Scharff N. Enigmatic and extravagant genitalia in the spider genus Mastigusa (Araneae, Cybaeidae) - a taxonomic revision. INVERTEBR SYST 2024; 38:IS23047. [PMID: 38744499 DOI: 10.1071/is23047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Accepted: 02/21/2024] [Indexed: 05/16/2024]
Abstract
Mastigusa is a genus of small palearctic spiders that has recently been moved to the family Cybaeidae after the first inclusion of the genus in a phylogenetic matrix. Three species are currently recognised: M. arietina , M. lucifuga and M. macrophthalma . The status and delimitation, though, has always been problematic due to inconsistency in the characters used to discriminate between these, leading to great confusion in identity and distribution. We present a detailed morphological redescription of the genus and a taxonomic revision of the included species by the combined use of morphological data and molecular species-delimitation techniques based on the mitochondrial COI gene. The status of the three currently described species has been reevaluated and Mastigusa diversa was revalidated based on material from the Iberian Peninsula, North Africa and the United Kingdom. The distribution of Mastigusa species is updated based on novel taxonomic considerations, and comments on the natural history and ecological differences observed in the species are provided. ZooBank: urn:lsid:zoobank.org:pub:AAD3FAED-440F-4295-B458-455B1D913F81.
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Affiliation(s)
- Filippo Castellucci
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Selmi 3, I-40126 Bologna, Italy; and Zoology Section, Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark
| | - Andrea Luchetti
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Selmi 3, I-40126 Bologna, Italy
| | - Nikolaj Scharff
- Zoology Section, Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark
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11
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Yu KP, Kuntner M. Discovering unknown Madagascar biodiversity: integrative taxonomy of raft spiders (Pisauridae: Dolomedes). PeerJ 2024; 12:e16781. [PMID: 38435991 PMCID: PMC10906265 DOI: 10.7717/peerj.16781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 12/18/2023] [Indexed: 03/05/2024] Open
Abstract
Madagascar is a global biodiversity hotspot, but its biodiversity continues to be underestimated and understudied. Of raft spiders, genus Dolomedes Latreille, 1804, literature only reports two species on Madagascar. Our single expedition to humid forests of eastern and northern Madagascar, however, yielded a series of Dolomedes exemplars representing both sexes of five morphospecies. To avoid only using morphological diagnostics, we devised and tested an integrative taxonomic model for Dolomedes based on the unified species concept. The model first determines morphospecies within a morphometrics framework, then tests their validity via species delimitation using COI. It then incorporates habitat preferences, geological barriers, and dispersal related traits to form hypotheses about gene flow limitations. Our results reveal four new Dolomedes species that we describe from both sexes as Dolomedes gregoric sp. nov., D. bedjanic sp. nov., D. hydatostella sp. nov., and D. rotundus sp. nov. The range of D. kalanoro Silva & Griswold, 2013, now also known from both sexes, is expanded to eastern Madagascar. By increasing the known raft spider diversity from one valid species to five, our results merely scratch the surface of the true Dolomedes species diversity on Madagascar. Our integrative taxonomic model provides the framework for future revisions of raft spiders anywhere.
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Affiliation(s)
- Kuang-Ping Yu
- Department of Organisms and Ecosystems Research, National Institute of Biology, Ljubljana, Slovenia
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia
| | - Matjaž Kuntner
- Department of Organisms and Ecosystems Research, National Institute of Biology, Ljubljana, Slovenia
- Jovan Hadži Institute of Biology, ZRC SAZU, Ljubljana, Slovenia
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., United States of America
- State Key Laboratory of Biocatalysis and Enzyme Engineering, and Centre for Behavioural Ecology and Evolution, School of Life Sciences, Hubei University, Wuhan, Hubei, China
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12
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Kreuz J, Michalik P, Wolff JO. Comparative anatomy of the spinneret musculature in cribellate and ecribellate spiders (Araneae). J Morphol 2024; 285:e21670. [PMID: 38361256 DOI: 10.1002/jmor.21670] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 12/07/2023] [Accepted: 12/11/2023] [Indexed: 02/17/2024]
Abstract
Silk production is a prominent characteristic of spiders. The silk is extruded through spigots located on the spinnerets, which are single- to multimembered paired appendages at the end of the abdomen. Most extant spiders have three pairs of spinnerets, and in between either a cribellum (spinning plate) or a colulus (defunct vestigial organ), dividing these spiders into cribellate and ecribellate species. Previous research has shown that cribellate and ecribellate spiders differ not only in the composition of their spinning apparatus but also in the movements of their spinnerets during silk spinning. The objective of this study was to determine whether the differences in spinneret movements are solely due to variations in spinneret shape or whether they are based on differences in muscular anatomy. This was accomplished by analyzing microcomputed tomography scans of the posterior abdomen of each three cribellate and ecribellate species. It was found that the number of muscles did not generally differ between cribellate and ecribellate species, but varied considerably between the species within each of these two groups. Muscle thickness, particularly of the posterior median spinneret, varied slightly between groups, with cribellate spiders exhibiting more robust muscles, possibly to aid in the combing process during cribellar thread production. Interestingly, the vestigial colulus still possesses muscles, that can be homologized with those of the cribellum. This exploration into spinneret anatomy using microcomputed tomography data reveals that despite being small appendages, the spider spinnerets are equipped with a complex musculature that enables them to perform fine-scaled maneuvers to construct different fiber-based materials.
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Affiliation(s)
- Josefine Kreuz
- Evolutionary Biomechanics, Zoological Institute and Museum, University of Greifswald, Greifswald, Germany
| | - Peter Michalik
- Zoological Museum, Zoological Institute and Museum, University of Greifswald, Greifswald, Germany
| | - Jonas O Wolff
- Evolutionary Biomechanics, Zoological Institute and Museum, University of Greifswald, Greifswald, Germany
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13
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Duque T, Chowdhury S, Isaia M, Pekár S, Riess K, Scherf G, Schäfer RB, Entling MH. Sensitivity of spiders from different ecosystems to lambda-cyhalothrin: effects of phylogeny and climate. PEST MANAGEMENT SCIENCE 2024; 80:857-865. [PMID: 37867443 DOI: 10.1002/ps.7818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Revised: 09/21/2023] [Accepted: 10/23/2023] [Indexed: 10/24/2023]
Abstract
BACKGROUND In spite of their importance as arthropod predators, spiders have received little attention in the risk assessment of pesticides. In addition, research has mainly focused on a few species commonly found in agricultural habitats. Spiders living in more natural ecosystems may also be exposed to and affected by pesticides, including insecticides. However, their sensitivity and factors driving possible variations in sensitivity between spider taxa are largely unknown. To fill this gap, we quantified the sensitivity of 28 spider species from a wide range of European ecosystems to lambda-cyhalothrin in an acute exposure scenario. RESULTS Sensitivity varied among the tested populations by a factor of 30. Strong differences in sensitivity were observed between families, but also between genera within the Lycosidae. Apart from the variation explained by the phylogeny, spiders from boreal and polar climates were more sensitive than spiders from warmer areas. Overall, the median lethal concentration (LC50 ) of 85% of species was below the recommended application rate of lambda-cyhalothrin (75 ng a.i. cm-2 ). CONCLUSION Our study underlines the high sensitivity of spiders to lambda-cyhalothrin, which can lead to unintended negative effects on pest suppression in areas treated with this insecticide. The strong differences observed between families and genera indicate that the functional composition of spider communities would change in affected areas. Overall, the variation in spider sensitivity suggests that multispecies investigations should be more widely considered in pesticide risk assessment. © 2023 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
- Tomás Duque
- iES Landau, Institute for Environmental Sciences, RPTU University of Kaiserslautern-Landau, Landau, Germany
| | - Sumaiya Chowdhury
- iES Landau, Institute for Environmental Sciences, RPTU University of Kaiserslautern-Landau, Landau, Germany
| | - Marco Isaia
- Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy
| | - Stano Pekár
- Department of Botany and Zoology, Faculty of Sciences, Masaryk University, Brno, Czech Republic
| | - Kai Riess
- iES Landau, Institute for Environmental Sciences, RPTU University of Kaiserslautern-Landau, Landau, Germany
| | - Gregor Scherf
- iES Landau, Institute for Environmental Sciences, RPTU University of Kaiserslautern-Landau, Landau, Germany
| | - Ralf B Schäfer
- iES Landau, Institute for Environmental Sciences, RPTU University of Kaiserslautern-Landau, Landau, Germany
| | - Martin H Entling
- iES Landau, Institute for Environmental Sciences, RPTU University of Kaiserslautern-Landau, Landau, Germany
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14
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Faustino-Magalhaes MD, Piacentini LN, Santos AJ. The desert wolf-spider genus Xenoctenus: two endemic species from the Brazilian Caatinga, and a redescription of the type-species, X. unguiculatus (Araneae: Xenoctenidae). Zootaxa 2024; 5399:517-539. [PMID: 38480122 DOI: 10.11646/zootaxa.5399.5.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Indexed: 03/24/2024]
Abstract
The Caatinga is a nucleus of seasonally dry tropical forest (SDTF) known as a hotspot of diversification and endemism. Despite its importance, this biome is still insufficiently sampled, resulting in extensive knowledge gaps regarding its species richness and composition. In this study we report two species of Xenoctenidae that are endemic to, and widely distributed in the Caatinga. We redescribe and illustrate Odo vittatus (Mello-Leito, 1936), the only xenoctenid species previously known from the Caatinga. We transfer this species to Xenoctenus Mello-Leito,1938, a genus currently known from six species restricted to Argentina, Bolivia, and Colombia. We also newly describe the male of Xenoctenus vittatus comb. nov. and provide new records of this species, which was hitherto known only from the type-locality, throughout the Caatinga and nearby semiarid vegetation formations. We also describe and illustrate a new species, Xenoctenus kaatinga sp. nov., based on males and female specimens collected throughout the Caatinga. Additionally, we propose diagnostic characters for Xenoctenus and redescribe the type-species, X. unguiculatus.
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Affiliation(s)
- Mayara D Faustino-Magalhaes
- Ps-graduao em Zoologia; Universidade Federal de Minas Gerais.; Departamento de Zoologia; Instituto de Cincias Biolgicas; Universidade Federal de Minas Gerais; Brazil; CEP 31270-901..
| | - Luis N Piacentini
- Divisin de Aracnolog Museo Argentino de Ciencias NaturalesBernardino Rivadavia; Av. Angel Gallardo 470; C1405DJR Buenos Aires; Argentina.
| | - Adalberto J Santos
- Ps-graduao em Zoologia; Universidade Federal de Minas Gerais. Departamento de Zoologia; Instituto de Cincias Biolgicas; Universidade Federal de Minas Gerais; Brazil; CEP 31270-901..
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15
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Zhang Y, Shen Y, Jin P, Zhu B, Lin Y, Jiang T, Huang X, Wang Y, Zhao Z, Li S. A trade-off in evolution: the adaptive landscape of spiders without venom glands. Gigascience 2024; 13:giae048. [PMID: 39101784 PMCID: PMC11299198 DOI: 10.1093/gigascience/giae048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Revised: 01/26/2024] [Accepted: 06/26/2024] [Indexed: 08/06/2024] Open
Abstract
BACKGROUND Venom glands play a key role in the predation and defense strategies of almost all spider groups. However, the spider family Uloboridae lacks venom glands and has evolved an adaptive strategy: they excessively wrap their prey directly with spider silk instead of paralyzing it first with toxins. This shift in survival strategy is very fascinating, but the genetic underpinnings behind it are poorly understood. RESULTS Spanning multiple spider groups, we conducted multiomics analyses on Octonoba sinensis and described the adaptive evolution of the Uloboridae family at the genome level. We observed the coding genes of myosin and twitchin in muscles are under positive selection, energy metabolism functions are enhanced, and gene families related to tracheal development and tissue mechanical strength are expanded or emerged, all of which are related to the unique anatomical structure and predatory behavior of spiders in the family Uloboridae. In addition, we also scanned the elements that are absent or under relaxed purifying selection, as well as toxin gene homologs in the genomes of 2 species in this family. The results show that the absence of regions and regions under relaxed selection in these spiders' genomes are concentrated in areas related to development and neurosystem. The search for toxin homologs reveals possible gene function shift between toxins and nontoxins and confirms that there are no reliable toxin genes in the genome of this group. CONCLUSIONS This study demonstrates the trade-off between different predation strategies in spiders, using either chemical or physical strategy, and provides insights into the possible mechanism underlying this trade-off. Venomless spiders need to mobilize multiple developmental and metabolic pathways related to motor function and limb mechanical strength to cover the decline in adaptability caused by the absence of venom glands.
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Affiliation(s)
- Yiming Zhang
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- Hebei Key Laboratory of Animal Diversity, College of Life Sciences, Langfang Normal University, Langfang 065000, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Yunxiao Shen
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Pengyu Jin
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Bingyue Zhu
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Yejie Lin
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- Hebei Key Laboratory of Animal Diversity, College of Life Sciences, Langfang Normal University, Langfang 065000, China
| | - Tongyao Jiang
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Xianting Huang
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Yang Wang
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Zhe Zhao
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Shuqiang Li
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
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16
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Kulkarni S, Wood HM, Hormiga G. Advances in the reconstruction of the spider tree of life: A roadmap for spider systematics and comparative studies. Cladistics 2023; 39:479-532. [PMID: 37787157 DOI: 10.1111/cla.12557] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 07/27/2023] [Accepted: 08/17/2023] [Indexed: 10/04/2023] Open
Abstract
In the last decade and a half, advances in genetic sequencing technologies have revolutionized systematics, transforming the field from studying morphological characters or a few genetic markers, to genomic datasets in the phylogenomic era. A plethora of molecular phylogenetic studies on many taxonomic groups have come about, converging on, or refuting prevailing morphology or legacy-marker-based hypotheses about evolutionary affinities. Spider systematics has been no exception to this transformation and the inter-relationships of several groups have now been studied using genomic data. About 51 500 extant spider species have been described, all with a conservative body plan, but innumerable morphological and behavioural peculiarities. Inferring the spider tree of life using morphological data has been a challenging task. Molecular data have corroborated many hypotheses of higher-level relationships, but also resulted in new groups that refute previous hypotheses. In this review, we discuss recent advances in the reconstruction of the spider tree of life and highlight areas where additional effort is needed with potential solutions. We base this review on the most comprehensive spider phylogeny to date, representing 131 of the 132 spider families. To achieve this sampling, we combined six Sanger-based markers with newly generated and publicly available genome-scale datasets. We find that some inferred relationships between major lineages of spiders (such as Austrochiloidea, Palpimanoidea and Synspermiata) are robust across different classes of data. However, several new hypotheses have emerged with different classes of molecular data. We identify and discuss the robust and controversial hypotheses and compile this blueprint to design future studies targeting systematic revisions of these problematic groups. We offer an evolutionary framework to explore comparative questions such as evolution of venoms, silk, webs, morphological traits and reproductive strategies.
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Affiliation(s)
- Siddharth Kulkarni
- Department of Biological Sciences, The George Washington University, 2029 G St. NW, Washington, DC, 20052, USA
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, 1000 Constitution Avenue NW, Washington, DC, 20560, USA
| | - Hannah M Wood
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, 1000 Constitution Avenue NW, Washington, DC, 20560, USA
| | - Gustavo Hormiga
- Department of Biological Sciences, The George Washington University, 2029 G St. NW, Washington, DC, 20052, USA
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17
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Bellvert A, Adrián-Serrano S, Macías-Hernández N, Toft S, Kaliontzopoulou A, Arnedo MA. The Non-Dereliction in Evolution: Trophic Specialisation Drives Convergence in the Radiation of Red Devil Spiders (Araneae: Dysderidae) in the Canary Islands. Syst Biol 2023; 72:998-1012. [PMID: 37474131 DOI: 10.1093/sysbio/syad046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Revised: 07/14/2023] [Accepted: 07/19/2023] [Indexed: 07/22/2023] Open
Abstract
Natural selection plays a key role in deterministic evolution, as clearly illustrated by the multiple cases of repeated evolution of ecomorphological characters observed in adaptive radiations. Unlike most spiders, Dysdera species display a high variability of cheliceral morphologies, which has been suggested to reflect different levels of specialization to feed on isopods. In this study, we integrate geometric morphometrics and experimental trials with a fully resolved phylogeny of the highly diverse endemic species from the Canary Islands to 1) quantitatively delimit the different cheliceral morphotypes present in the archipelago, 2) test their association with trophic specialization, as reported for continental species, 3) reconstruct the evolution of these ecomorphs throughout the diversification of the group, 4) test the hypothesis of convergent evolution of the different morphotypes, and 5) examine whether specialization constitutes a case of evolutionary irreversibility in this group. We show the existence of 9 cheliceral morphotypes and uncovered their significance for trophic ecology. Further, we demonstrate that similar ecomorphs evolved multiple times in the archipelago, providing a novel study system to explain how convergent evolution and irreversibility due to specialization may be combined to shape phenotypic diversification in adaptive radiations.
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Affiliation(s)
- Adrià Bellvert
- Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Av. Diagonal, 643, 08028 Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - Silvia Adrián-Serrano
- Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Av. Diagonal, 643, 08028 Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - Nuria Macías-Hernández
- Department of Animal Biology, Edaphology and Geology, Universidad de La Laguna, Tenerife, Canary Islands, Spain
- Laboratory for Integrative Biodiversity Research (LIBRe), Finnish Museum of Natural History, University of Helsinki, Finland
| | - Søren Toft
- Department of Biology, Aarhus University, Ny Munkegade 116, DK-8000 Århus C, Denmark
| | - Antigoni Kaliontzopoulou
- Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Av. Diagonal, 643, 08028 Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
| | - Miquel A Arnedo
- Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Av. Diagonal, 643, 08028 Barcelona, Spain
- Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Barcelona, Spain
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18
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Kelly MBJ, Khan MK, Wierucka K, Jones BR, Shofner R, Derkarabetian S, Wolff JO. Dynamic evolution of locomotor performance independent of changes in extended phenotype use in spiders. Proc Biol Sci 2023; 290:20232035. [PMID: 37876190 PMCID: PMC10598421 DOI: 10.1098/rspb.2023.2035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Accepted: 10/06/2023] [Indexed: 10/26/2023] Open
Abstract
Many animals use self-built structures (extended phenotypes) to enhance body functions, such as thermoregulation, prey capture or defence. Yet, it is unclear whether the evolution of animal constructions supplements or substitutes body functions-with disparate feedbacks on trait evolution. Here, using brown spiders (Araneae: marronoid clade), we explored if the evolutionary loss and gain of silken webs as extended prey capture devices correlates with alterations in traits known to play an important role in predatory strikes-locomotor performance (sprint speed) and leg spination (expression of capture spines on front legs). We found that in this group high locomotor performance, with running speeds of over 100 body lengths per second, evolved repeatedly-both in web-building and cursorial spiders. There was no correlation with running speed, and leg spination only poorly correlated, relative to the use of extended phenotypes, indicating that web use does not reduce selective pressures on body functions involved in prey capture and defence per se. Consequently, extended prey capture devices serve as supplements rather than substitutions to body traits and may only be beneficial in conjunction with certain life-history traits, possibly explaining the rare evolution and repeated loss of trapping strategies in predatory animals.
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Affiliation(s)
- Michael B. J. Kelly
- Evolutionary Biomechanics, Zoological Institute and Museum, University of Greifswald, Loitzer Strasse 26, 17489 Greifswald, Germany
- School of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
| | - Md Kawsar Khan
- School of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
- Institute of Biology, Freie Universität Berlin, Königin-Luise-Straße 1-3, 14195 Berlin, Germany
| | - Kaja Wierucka
- School of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
- Behavioural Ecology and Sociobiology Unit, German Primate Center - Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany
| | - Braxton R. Jones
- School of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
- School of Biological Sciences, University of Sydney, Camperdown, New South Wales 2006, Australia
| | - Ryan Shofner
- Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences E26, University of New South Wales, Sydney 2052, Australia
| | - Shahan Derkarabetian
- Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA
| | - Jonas O. Wolff
- Evolutionary Biomechanics, Zoological Institute and Museum, University of Greifswald, Loitzer Strasse 26, 17489 Greifswald, Germany
- School of Natural Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
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19
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Raven RJ, Hebron W, Williams K. Revisions of Australian ground-hunting spiders VI: five new stripe-less miturgid genera and 48 new species (Miturgidae: Miturginae). Zootaxa 2023; 5358:1-117. [PMID: 38220628 DOI: 10.11646/zootaxa.5358.1.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Indexed: 01/16/2024]
Abstract
A group of Australian miturgines that are common in widespread areas of mostly dry landscapes are revised. Five new genera (Miturgopelma, Knotodo, Xistera, Miturgiella and Xeromiturga) and 48 new species are described. Three species presently included in three families are placed in these groups in the Miturgidae: Uliodon ferrugineus (L. Koch, 1873) is transferred from the Zoropsidae to Miturgopelma gen. nov.; likewise, Odo australiensis Hickman, 1944, from Central Australia, is transferred from an otherwise South American genus presently in the family Xenoctenidae to Miturgopelma gen. nov.; and Argoctenus gracilis Hickman, 1950 is transferred to Knotodo gen. nov. Miturgopelma gen. nov. is a very diverse genus found throughout much of drier Australia but not yet in Cape York, Queensland, although one species is taken from Tasmania. Besides Miturgopelma ferruginea (L. Koch, 1873) comb. nov. and Miturgopelma australiensis (Hickman, 1944) comb. nov., the new genus Miturgopelma includes 31 new species: M. alanyeni sp. nov., M. archeri sp. nov. M. baehrae sp. nov., M. bandalup sp. nov., M. biancahilleryae sp. nov., M. bogantungan sp. nov., M. brachychiton sp. nov., M. brevirostra sp. nov., M. bungabiddy sp. nov., M. buckaringa sp. nov., M. calperum sp. nov., M. caitlinae sp. nov., M. couperi sp. nov., M. culgoa sp. nov., M. echidna sp. nov., M. echinoides sp. nov., M. harveyi sp. nov., M. hebronae sp. nov., M. kinchega sp. nov., M. maningrida sp. nov., M. minderoo sp. nov., M. oakleigh sp. nov., M. paruwi sp. nov., M. rangerstaceyae sp. nov., M. rar sp. nov., M. rixi sp. nov., M. seida sp. nov., M. spinisternis sp. nov., M. watarrka sp. nov., M. woz sp. nov., and M. yarmina sp. nov. Knotodo gen. nov., a predominantly western and southern group, includes Knotodo gracilis (Hickman, 1950) comb. nov., and seven new species: K. coolgardie sp. nov., K. eneabba sp. nov., K. narelleae sp. nov., K. shoadi sp. nov., K. muckera sp. nov., K. nullarbor sp. nov., and K. toolinna sp. nov. Xistera gen. nov., another predominantly Western Australian and southern group, includes five new species: Xis. auriphila sp. nov., Xis. barlee sp. nov., Xis. coventryi sp. nov., Xis. jandateae sp. nov., and Xis. serpentine sp. nov. Xeromiturga gen. nov., another predominantly western and southern group, includes four new species: Xer. gumbardo sp. nov., Xer. mardathuna sp. nov., Xer. bidgemia sp. nov., and Xer. pilbara sp. nov. A widespread, monotypic eastern Australian genus, Miturgiella vulgaris gen. et sp. nov., is also described. Zoroides Berland, 1924, presently in Miturgidae, is considered a junior synonym of the phrurolithid Dorymetaecus Rainbow, 1920 syn. nov., thus making Dorymetaecus dalmasi (Berland 1924) comb. nov. Miturga whistleri Simon, 1909 and Miturga splendens Hickman, 1930 are both placed in Mituliodon tarantulinus syn. nov..
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Affiliation(s)
- Robert J Raven
- School of Agriculture and Environmental Science; University of Southern Queensland; West Street; Toowoomba; 4350; Queensland; Australia; Queensland Museum; PO Box 3300; South Brisbane; Queensland 4101; Australia.
| | - Wendy Hebron
- Queensland Museum; PO Box 3300; South Brisbane; Queensland 4101; Australia.
| | - Kylie Williams
- Queensland; Australia; Queensland Museum; PO Box 3300; South Brisbane; Queensland 4101; Australia.
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Fischer A, Fernando Y, Preston A, Moniz-de-Sa S, Gries G. Widow spiders alter web architecture and attractiveness in response to same-sex competition for prey and mates, and predation risk. Commun Biol 2023; 6:1028. [PMID: 37821674 PMCID: PMC10567780 DOI: 10.1038/s42003-023-05392-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Accepted: 09/26/2023] [Indexed: 10/13/2023] Open
Abstract
Female-female competition in animals has rarely been studied. Responses of females that compete context-dependently for mates and prey, and seek safety from predators, are ideally studied with web-building spiders. Cobwebs possess unique sections for prey capture and safety, which can be quantified. We worked with Steaoda grossa females because their pheromone is known, and adjustments in response to mate competition could be measured. Females exposed to synthetic sex pheromone adjusted their webs, indicating a perception of intra-sexual competition via their sex pheromone. When females sequentially built their webs in settings of low and high intra-sexual competition, they adjusted their webs to increase prey capture and lower predation risk. In settings with strong mate competition, females deposited more contact pheromone components on their webs and accelerated their breakdown to mate-attractant pheromone components, essentially increasing their webs' attractiveness. We show that females respond to sexual, social and natural selection pressures originating from intra-sexual competition.
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Affiliation(s)
- Andreas Fischer
- Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada.
| | - Yasasi Fernando
- Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada
| | - April Preston
- Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada
| | - Sarah Moniz-de-Sa
- Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada
| | - Gerhard Gries
- Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada
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21
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Keimasi M, Salehifard K, Hoseini SJ, Esmaeili F, Esfahani NMJ, Amirsadri M, Keimasi M, Moradmand M, Mofid MR. Purified Native Protein Extracted from the Venom of Agelena orientalis Attenuates Memory Defects in the Rat Model of Glutamate-Induced Excitotoxicity. Protein J 2023; 42:586-595. [PMID: 37531037 DOI: 10.1007/s10930-023-10140-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/18/2023] [Indexed: 08/03/2023]
Abstract
Spider venom contains various peptides and proteins, which can be used for pharmacological applications. Finding novel therapeutic strategies against neurodegenerative diseases with the use of purified peptides and proteins, extracted from spiders can be greatly precious. Neurodegenerative diseases are rapidly developing and expanding all over the world. Excitotoxicity is a frequent condition amongst neuro-degenerative disorders. This harmful process is usually induced through hyper-activation of N-Methyl-D-Aspartate (NMDA) receptor, and P/Q-type voltage-gated calcium channels (VGCCs). The omega-agatoxin-Aa4b is a selective and strong VGCCblocker. This study aimed to investigate the effects of this blocker on the NMDA-induced memory and learning defect in rats. For this purpose, nineteen spiders of the funnel-weaver Agelena orientalis species were collected. The extracted venom was lyophilized andpurified through gel-filtration chromatography, and capillary electrophoresis techniques. Subsequently, mass spectrometry (HPLC-ESI-MS) was used for identification of this bio-active small protein. Afterward, the effect of the omega-agatoxin-Aa4b (2 μg, intra-cornu ammonis-3 of the hippocampus) on the NMDA-induced learning and memory deficits in rats was evaluated. Learning and memory performances were evaluated by the use of passive avoidance test. For synaptic quantification and memory function the amount of calcium/calmodulin-dependent protein kinase ІІ (CaCdPKІІ) gene expression was measured using the Real-time PCR technique. To compare the experimental groups, hematoxylin and eosin (H&E) staining of hippocampus tissues was performed. Our results rendered that the omega-Agatoxin-Aa4b treatment can ameliorate and reverse the learning and memory impairment caused by NMDA-induced excitotoxicity in rat hippocampus.
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Affiliation(s)
- Mohammad Keimasi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Kowsar Salehifard
- Department of Physiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Sayyed Jafar Hoseini
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Fariba Esmaeili
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Noushin Mirshah Jafar Esfahani
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Mohammadreza Amirsadri
- Department of Clinical Pharmacy and Pharmacy Practice, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Mohammadjavad Keimasi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Majid Moradmand
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran.
| | - Mohammad Reza Mofid
- Department of Clinical Biochemistry, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran.
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22
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Garca F, Bonaldo AB. Taxonomic revision of the soldier spider genus Falconina Brignoli, 1985 (Araneae: Corinnidae: Corinninae). Zootaxa 2023; 5343:201-242. [PMID: 38221378 DOI: 10.11646/zootaxa.5343.3.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Indexed: 01/16/2024]
Abstract
The genus Falconina Brignoli, 1985 is revised and redescribed, including ten species. New records and documentation of morphological variation in F. gracilis (Keyserling, 1891) are presented; it and the type species, F. melloi (Schenkel, 1953), are rediagnosed. Falconina albomaculosa (Schmidt, 1971) is redescribed based on the female holotype and additional material from Ecuador, with the male being described for the first time. Falconina crassipalpis (Chickering, 1937) is redescribed based on the types and additional material from Barro Colorado, Panama. Six new species are described, diagnosed, and illustrated: F. iza sp. nov. ( from Rio Grande do Sul, Brazil); F. taita sp. nov. ( from Chapare and from Sapecho, Bolivia); F. catirina sp. nov. ( from Piau, Brazil); F. adriki sp. nov. ( and from Rio de Janeiro, Brazil); F. andresi sp. nov. ( from Meta, Colombia); and F. brignolii sp. nov. ( from Sucre, Venezuela). Additionally, distribution maps and an identification key to all of the known species of Falconina are provided.
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Affiliation(s)
- Fabin Garca
- Museu Paraense Emlio Goeldi; Coordenao de Zoologia; Laboratrio de Aracnologia; Av. Perimetral 1901; CEP: 66077-830; Belm; Par; Brazil; Programa de Ps-Graduao em Biodiversidade e EvoluoMuseu Paraense Emlio Goeldi; Programa de Ps-Graduao em ZoologiaUniversidade Federal do Par / Museu Paraense Emlio Goeldi.
| | - Alexandre B Bonaldo
- Museu Paraense Emlio Goeldi; Coordenao de Zoologia; Laboratrio de Aracnologia; Av. Perimetral 1901; CEP: 66077-830; Belm; Par; Brazil; Programa de Ps-Graduao em Biodiversidade e EvoluoMuseu Paraense Emlio Goeldi; Programa de Ps-Graduao em ZoologiaUniversidade Federal do Par / Museu Paraense Emlio Goeldi.
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23
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Napiórkowska T, Templin J, Napiórkowski P, Townley MA. Appendage abnormalities in spiders induced by an alternating temperature protocol in the context of recent advances in molecular spider embryology. PeerJ 2023; 11:e16011. [PMID: 37701827 PMCID: PMC10493090 DOI: 10.7717/peerj.16011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Accepted: 08/10/2023] [Indexed: 09/14/2023] Open
Abstract
In the literature there are numerous reports of developmental deformities in arthropods collected in their natural habitat. Since such teratogenically affected individuals are found purely by chance, the causes of their defects are unknown. Numerous potential physical, mechanical, chemical, and biological teratogens have been considered and tested in the laboratory. Thermal shocks, frequently used in teratological research on the spider Eratigena atrica, have led to deformities on both the prosoma and the opisthosoma. In the 2020/2021 breeding season, by applying alternating temperatures (14 °C and 32 °C, changed every 12 h) for the first 10 days of embryonic development, we obtained 212 postembryos (out of 3,007) with the following anomalies: oligomely, heterosymely, bicephaly, schistomely, symely, polymely, complex anomalies, and others. From these we selected six spiders with defects on the prosoma and two with short appendages on the pedicel for further consideration. The latter cases seem particularly interesting because appendages do not normally develop on this body part, viewed as the first segment of the opisthosoma, and appear to represent examples of atavism. In view of the ongoing development of molecular techniques and recent research on developmental mechanisms in spiders, we believe the observed phenotypes may result, at least in part, from the erroneous suppression or expression of segmentation or appendage patterning genes. We consider "knockdown" experiments described in the literature as a means for generating hypotheses about the sources of temperature-induced body abnormalities in E. atrica.
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Affiliation(s)
- Teresa Napiórkowska
- Department of Invertebrate Zoology and Parasitology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Julita Templin
- Faculty of Biological and Veterinary Sciences, Department of Invertebrate Zoology and Parasitology, Nicolaus Copernicus University in Torun, Toruń, Poland
| | - Paweł Napiórkowski
- Department of Hydrobiology, Faculty of Biological Sciences, Kazimierz Wielki University in Bydgoszcz, Bydgoszcz, Poland
| | - Mark A. Townley
- University Instrumentation Center, University of New Hampshire, Durham, New Hampshire, United States
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24
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Yang W, Deng L, Yu H, Zhong Y. A new species of Jacaena Thorell, 1897 (Araneae: Liocranidae) from Guiyang, southwestern China. Zootaxa 2023; 5339:185-195. [PMID: 38221058 DOI: 10.11646/zootaxa.5339.2.5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Indexed: 01/16/2024]
Abstract
A new species belonging to the liocranid genus Jacaena Thorell, 1897, J. guiyang sp. nov., is described from southwestern China. A detailed description, diagnosis, photographs, and distribution map of the new species are given. DNA barcodes of the species were obtained and confirmed matching of the sexes, and are available for future use.
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Affiliation(s)
- Weicheng Yang
- The State Key Laboratory of Southwest Karst Mountain Biodiversity Conservation of Forestry Administration; School of life sciences; Guizhou Normal University; Guiyang 550025; Guizhou; China.
| | - Langju Deng
- School of Biological Sciences; Guizhou Education University; Guiyang 550018; China.
| | - Hao Yu
- The State Key Laboratory of Southwest Karst Mountain Biodiversity Conservation of Forestry Administration; School of life sciences; Guizhou Normal University; Guiyang 550025; Guizhou; China. School of Biological Sciences; Guizhou Education University; Guiyang 550018; China.
| | - Yang Zhong
- School of Nuclear Technology and Chemistry & Biology; Hubei University of Science and Technology; Xianning 437100; China.
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25
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Fan Z, Wang LY, Xiao L, Tan B, Luo B, Ren TY, Liu N, Zhang ZS, Bai M. Lampshade web spider Ectatosticta davidi chromosome-level genome assembly provides evidence for its phylogenetic position. Commun Biol 2023; 6:748. [PMID: 37463957 PMCID: PMC10354039 DOI: 10.1038/s42003-023-05129-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Accepted: 07/10/2023] [Indexed: 07/20/2023] Open
Abstract
The spider of Ectatosticta davidi, belonging to the lamp-shade web spider family, Hypochilidae, which is closely related to Hypochilidae and Filistatidae and recovered as sister of the rest Araneomorphs spiders. Here we show the final assembled genome of E. davidi with 2.16 Gb in 15 chromosomes. Then we confirm the evolutionary position of Hypochilidae. Moreover, we find that the GMC gene family exhibit high conservation throughout the evolution of true spiders. We also find that the MaSp genes of E. davidi may represent an early stage of MaSp and MiSp genes in other true spiders, while CrSp shares a common origin with AgSp and PySp but differ from MaSp. Altogether, this study contributes to addressing the limited availability of genomic sequences from Hypochilidae spiders, and provides a valuable resource for investigating the genomic evolution of spiders.
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Affiliation(s)
- Zheng Fan
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, 100101, Beijing, China
- School of Life Sciences, Southwest University, 400700, Chongqing, China
| | - Lu-Yu Wang
- School of Life Sciences, Southwest University, 400700, Chongqing, China
| | - Lin Xiao
- School of Life Sciences, Southwest University, 400700, Chongqing, China
| | - Bing Tan
- School of Life Sciences, Southwest University, 400700, Chongqing, China
| | - Bin Luo
- School of Life Sciences, Southwest University, 400700, Chongqing, China
| | - Tian-Yu Ren
- School of Life Sciences, Southwest University, 400700, Chongqing, China
| | - Ning Liu
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, 100101, Beijing, China.
| | - Zhi-Sheng Zhang
- School of Life Sciences, Southwest University, 400700, Chongqing, China.
| | - Ming Bai
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, 100101, Beijing, China.
- Northeast Asia Biodiversity Research Center, Northeast Forestry University, 150040, Harbin, China.
- University of Chinese Academy of Sciences, 100049, Beijing, China.
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26
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Choi EH, Hwang UW. Complete mitochondrial genome of a golden orb-web spider Trichonephila clavata (Chelicerata, Arachnida) from South Korea. Mitochondrial DNA B Resour 2023; 8:723-725. [PMID: 37416894 PMCID: PMC10321228 DOI: 10.1080/23802359.2021.1955633] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Accepted: 07/12/2021] [Indexed: 07/08/2023] Open
Abstract
The mitochondrial genome of a golden orb-web spider Trichonephila clavata (L. Koch, 1878) from South Korea is determined and characterized in detail, which is the second mitochondrial genome reported from this species: the first was published from the Chinese sample by Pan et al. (2016). It was 14,436 bp in length being composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes, two ribosomal RNA genes, and one control region (CR). It has a base composition of 35.99% for 'A,' 14.88% for 'G,' 9.09% for 'C,' and 40.04% for 'T.' Comparing the South Korean and Chinese mitochondrial genomes, we observed 8% nucleotide sequence differences between their CRs, caused by the different numbers and sorts of possessed tandem repeats, suggesting a promising molecular marker to distinguish South Korean individuals from Chinese ones. The phylogenetic trees using the maximum likelihood (ML) method were reconstructed with nucleotides (without 3rd codon position) and amino acids from 13 PCGs, respectively, which consistently confirmed that T. clavata (Subfamily Nephilinae) from South Korea and China are clustered together, distinctly separated from the other subfamily Araneinae in the monophyletic family Araneidae.
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Affiliation(s)
- Eun Hwa Choi
- Department of Biology Education, Teachers College and Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, South Korea
| | - Ui Wook Hwang
- Department of Biology Education, Teachers College and Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, South Korea
- Institute for Korean Herb-Bio Convergence Promotion, Kyungpook National University, Daegu, South Korea
- School of Industrial Technology Advances, Kyungpook National University, Daegu, South Korea
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27
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Huang Z, Yin H, Cai QU, Xu X. Two species of hackled-orb web spider genus Hyptiotes (Araneae, Uloboridae) from Guangxi, China. Zootaxa 2023; 5311:65-84. [PMID: 37518655 DOI: 10.11646/zootaxa.5311.1.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Indexed: 08/01/2023]
Abstract
Two species of the genus Hyptiotes Walckenaer 1837 are described from Guangxi Zhuang Autonomous Region, China, including a new species, Hyptiotes nonggang n. sp. (♂♀), and a known species, Hyptiotes paradoxus (C. L. Koch, 1834) (♂♀) which is the type species. Detailed descriptions and illustrations of the two species are provide, and a map of collecting localities of them in China is also provided.
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Affiliation(s)
- Zongguang Huang
- College of Life Science; Hunan Normal University; Changsha 410081; Hunan; China.
| | - Haiqiang Yin
- College of Life Science; Hunan Normal University; Changsha 410081; Hunan; China.
| | - Q U Cai
- College of Life Science; Hunan Normal University; Changsha 410081; Hunan; China.
| | - Xiang Xu
- College of Life Science; Hunan Normal University; Changsha 410081; Hunan; China.
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28
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Machado M, Previato T, Grismado CJ, Teixeira R. Taxonomic review of the Andean crab spiders genus Coenypha Simon, 1895 (Thomisidae: Stephanopinae). Zootaxa 2023; 5306:301-330. [PMID: 37518520 DOI: 10.11646/zootaxa.5306.3.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Indexed: 08/01/2023]
Abstract
The genus Coenypha Simon, 1895 is composed of species distributed on the Southern Andean Region and Patagonia, and presents remarkable somatic morphologies, such as the flattened habitus, enlarged femora I, and a wide opisthosoma. Molecular and morphology-based phylogenies have revealed the close relationship of this genus with sympatric species previously assigned to Stephanopis O. Pickard-Cambridge, 1869. Our recent cladistic analysis extended such preliminary results in recovering numerous morphological characters as synapomorphies of a well-supported clade, thus justifying the transfer of all species of 'Andean Stephanopis' to Coenypha. In the present work, we provide a taxonomic review of these species, update their diagnoses, descriptions and illustrate them through detailed photographs. New distribution records are presented, the male of C. antennata (Tullgren, 1902) is described for the first time, and two new species are described based on both sexes (Coenypha trapezium sp. nov. and Coenypha foliacea sp. nov.). Stephanopis exigua (Nicolet, 1849) is considered a nomen dubium. Stephanopis verrucosa (Nicolet, 1849), Thomisus spectrum Nicolet, 1849, and T. pubescens Nicolet, 1849 are synonymized with Coenypha nodosa (Nicolet, 1849). The synonymy of Thomisus nicoleti Roewer, 1951 (a replaced name for T. cinereus Nicolet, 1849 due to a homonymy) with Misumenops temibilis (Holmberg, 1876) is rejected, and considered together with Stephanopis spissa (Nicolet, 1849), Thomisus variabilis Nicolet, 1849 and Stephanopis maulliniana Mello-Leitão, 1951, synonyms of Coenypha ditissima (Nicolet, 1849); Stephanopis badia Keyserling, 1880 is transferred to Sidymella Strand, 1942.
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Affiliation(s)
- Miguel Machado
- Pontifícia Universidade Católica do Rio Grande do Sul; Escola de Ciências da Saúde e da Vida; Museu de Ciências e Tecnologia; Laboratório de Aracnologia.
| | - Thales Previato
- Pontifícia Universidade Católica do Rio Grande do Sul; Escola de Ciências da Saúde e da Vida; Museu de Ciências e Tecnologia; Laboratório de Aracnologia.
| | - Cristian J Grismado
- División Aracnología; Museo Argentino de CienciasNaturales "Bernardino Rivadavia" (MACN).
| | - Renato Teixeira
- Pontifícia Universidade Católica do Rio Grande do Sul; Escola de Ciências da Saúde e da Vida; Museu de Ciências e Tecnologia; Laboratório de Aracnologia.
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29
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Kulkarni S, Wood HM, Hormiga G. Phylogenomics illuminates the evolution of orb webs, respiratory systems and the biogeographic history of the world's smallest orb-weaving spiders (Araneae, Araneoidea, Symphytognathoids). Mol Phylogenet Evol 2023:107855. [PMID: 37311493 DOI: 10.1016/j.ympev.2023.107855] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 05/01/2023] [Accepted: 06/07/2023] [Indexed: 06/15/2023]
Abstract
The miniature orb weaving spiders (symphytognathoids) are a group of small spiders (< 2 mm), including the smallest adult spider Patu digua (0.37 mm in body length), that have been classified into five families. The species of one of its constituent lineages, the family Anapidae, build a remarkable diversity of webs (ranging from orbs to sheet webs and irregular tangles) and even include a webless kleptoparasitic species. Anapids are also exceptional because of the extraordinary diversity of their respiratory systems. The phylogenetic relationships of symphytognathoid families have been recalcitrant with different classes of data, such as, monophyletic with morphology and its concatenation with Sanger-based six markers, paraphyletic (including a paraphyletic Anapidae) with solely Sanger-based six markers, and polyphyletic with transcriptomes. In this study, we capitalized on a large taxonomic sampling of symphytognathoids, focusing on Anapidae, and using de novo sequenced ultraconserved elements (UCEs) combined with UCEs recovered from available transcriptomes and genomes. We evaluated the conflicting relationships using a variety of support metrics and topology tests. We found support for the phylogenetic hypothesis proposed using morphology to obtain the "symphytognathoids'' clade, Anterior Tracheal System (ANTS) Clade and monophyly of the family Anapidae. Anapidae can be divided into three major lineages, the Vichitra Clade (including Teutoniella, Holarchaea, Sofanapis and Acrobleps), the subfamily Micropholcommatinae and the Orb-weaving anapids (Owa) Clade. Biogeographic analyses reconstructed a hypothesis of multiple long-distance transoceanic dispersal events, potentially influenced by the Antarctic Circumpolar Current and West Wind Drift. In symphytognathoids, the ancestral anterior tracheal system transformed to book lungs four times and reduced book lungs five times. The posterior tracheal system was lost six times. The orb web structure was lost four times independently and transformed into sheet web once.
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Affiliation(s)
- Siddharth Kulkarni
- Department of Biological Sciences, The George Washington University, 2029 G St. NW, Washington, D.C. 20052, USA; Department of Entomology, National Museum of Natural History, Smithsonian Institution, 1000 Constitution Avenue NW, Washington, DC, 20560, USA; (currently) Department of Integrative Biology, University of Wisconsin-Madison, Madison, 53706, USA.
| | - Hannah M Wood
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, 1000 Constitution Avenue NW, Washington, DC, 20560, USA
| | - Gustavo Hormiga
- Department of Biological Sciences, The George Washington University, 2029 G St. NW, Washington, D.C. 20052, USA.
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Suárez D, Arribas P, Macías-Hernández N, Emerson BC. Dispersal ability and niche breadth influence interspecific variation in spider abundance and occupancy. ROYAL SOCIETY OPEN SCIENCE 2023; 10:230051. [PMID: 37181793 PMCID: PMC10170352 DOI: 10.1098/rsos.230051] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Accepted: 04/13/2023] [Indexed: 05/16/2023]
Abstract
The relationship between species local abundance and their regional distribution (occupancy) is one of the most extensively recognized and investigated patterns in ecology. While exceptions exist, the generally held model is that locally abundant species also tend to be more widespread geographically. However, there is only a limited understanding of both the mechanisms driving this relationship, and their scale dependency. Here we use occupancy and abundance data for 123 species of spider from across the Canary Islands to understand how both dispersal ability and niche breadth might mediate variation among species for local abundance and occupancy. We test the predictions that (i) dispersal ability explains variation among species for both abundance and occupancy, and (ii) species with a higher degree of habitat specialization, reflecting more limited niche breadth, will have both higher occupancy and abundance. We find no evidence within habitat patches for an effect of dispersal ability on either local abundance or site occupancy, while across all patches species with higher dispersal ability tend to occupy more sites. Species largely restricted to laurel forests have higher abundance than species with broader niche breadth, but similar occupancy. The study revealed that dispersal ability and niche breadth were significant predictors of the abundance-occupancy relationship, highlighting the importance of both factors for understanding patterns of abundance and occupancy among spider species.
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Affiliation(s)
- Daniel Suárez
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), C/Astrofísico Francisco Sánchez 3, La Laguna, Tenerife, Canary Islands 38206, Spain
- School of Doctoral and Postgraduate Studies, University of La Laguna, 38200 La Laguna, Tenerife, Canary Islands 38200, Spain
| | - Paula Arribas
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), C/Astrofísico Francisco Sánchez 3, La Laguna, Tenerife, Canary Islands 38206, Spain
| | - Nuria Macías-Hernández
- Departamento de Biología Animal, Edafología y Geología, Universidad of La Laguna, 38200 La Laguna, Tenerife, Canary Islands 38200, Spain
- Laboratory for Integrative Biodiversity Research (LIBRe), Finnish Museum of Natural History LUOMUS, University of Helsinki, 00014 Helsinki, Finland
| | - Brent C. Emerson
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), C/Astrofísico Francisco Sánchez 3, La Laguna, Tenerife, Canary Islands 38206, Spain
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31
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Caetano C, Griswold CE, Michalik P, Labarque FM. Evolution and comparative morphology of raptorial feet in spiders. ARTHROPOD STRUCTURE & DEVELOPMENT 2023; 74:101255. [PMID: 37011488 DOI: 10.1016/j.asd.2023.101255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2023] [Revised: 03/13/2023] [Accepted: 03/13/2023] [Indexed: 06/02/2023]
Abstract
Spiders are among the most diverse animals, which developed different morphological and behavioral traits for capturing prey. We studied the anatomy and functionality of the rare and apomorphic raptorial spider feet using 3D reconstruction modeling, among other imaging techniques. The evolutionary reconstruction of the raptorial feet (tarsus plus pretarsus) features using a composite tree of spiders, indicating that similar traits emerged three times independently in Trogloraptoridae, Gradungulinae, and Doryonychus raptor (Tetragnathidae). The characteristics defining the raptorial feet are an interlocked complex merging of the base of the elongated prolateral claw with the pretarsal sclerotized ring, with the former clasping against the tarsus. Raptorial feet even flex over robust raptorial macrosetae forming a reduced tarsal version of a catching basket to encase prey during hunting. Our results show that Celaeniini (Araneidae) and Heterogriffus berlandi (Thomisidae), taxa previously compared with raptorial spiders, lack the raptorial feet key characteristics and the tarsal-catching basket. We make predictions about the possible behavior of the abovementioned taxa that will need to be tested by observing living specimens. We conclude that multiple morphological tarsal and pretarsal micro-structures define the raptorial foot functional unit and recommend a comprehensive evaluation before assigning this configuration to any spider taxa.
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Affiliation(s)
- Carolina Caetano
- Departamento de Ecologia e Biologia Evolutiva (DEBE), Universidade Federal de São Carlos (UFSCar), campus São Carlos, Rodovia Washington Luís, Km 235, CEP, 13565-905, São Carlos, SP, Brazil; Departamento de Hidrobiologia (DHb), Universidade Federal de São Carlos (UFSCar), campus São Carlos, Rodovia Washington Luís, Km 235, CEP, 13565-905, São Carlos, SP, Brazil.
| | - Charles E Griswold
- California Academy of Sciences, 55 Music Concourse Drive, San Francisco, CA, 94118, USA.
| | - Peter Michalik
- Zoologisches Institut und Museum, Universität Greifswald, Greifswald, Germany.
| | - Facundo M Labarque
- Departamento de Ecologia e Biologia Evolutiva (DEBE), Universidade Federal de São Carlos (UFSCar), campus São Carlos, Rodovia Washington Luís, Km 235, CEP, 13565-905, São Carlos, SP, Brazil.
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McLean CA, Melville J, Schubert J, Rose R, Medina I. Assessing the impact of fire on spiders through a global comparative analysis. Proc Biol Sci 2023; 290:20230089. [PMID: 37122254 PMCID: PMC10130718 DOI: 10.1098/rspb.2023.0089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Accepted: 03/20/2023] [Indexed: 05/02/2023] Open
Abstract
In many regions fire regimes are changing due to anthropogenic factors. Understanding the responses of species to fire can help to develop predictive models and inform fire management decisions. Spiders are a diverse and ubiquitous group and can offer important insights into the impacts of fire on invertebrates and whether these depend on environmental factors, phylogenetic history or functional traits. We conducted phylogenetic comparative analyses of data from studies investigating the impacts of fire on spiders. We investigated whether fire affects spider abundance or presence and whether ecologically relevant traits or site-specific factors influence species' responses to fire. Although difficult to make broad generalizations about the impacts of fire due to variation in site- and fire-specific factors, we find evidence that short fire intervals may be a threat to some spiders, and that fire affects abundance and species compositions in forests relative to other vegetation types. Orb and sheet web weavers were also more likely to be absent after fire than ambush hunters, ground hunters and other hunters suggesting functional traits may affect responses. Finally, we show that analyses of published data can be used to detect broad-scale patterns and provide an alternative to traditional meta-analytical approaches.
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Affiliation(s)
- Claire A. McLean
- Sciences Department, Museums Victoria, 11 Nicholson Street, Carlton, VIC 3053, Australia
| | - Jane Melville
- Sciences Department, Museums Victoria, 11 Nicholson Street, Carlton, VIC 3053, Australia
- School of Biological Sciences, Monash University, Clayton, VIC 3800, Australia
| | - Joseph Schubert
- Sciences Department, Museums Victoria, 11 Nicholson Street, Carlton, VIC 3053, Australia
| | - Rebecca Rose
- Sciences Department, Museums Victoria, 11 Nicholson Street, Carlton, VIC 3053, Australia
| | - Iliana Medina
- School of BioSciences, The University of Melbourne, Royal Parade, Parkville, VIC 3010, Australia
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33
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Brandt S, Sole C, Lyle R. The phylogenetic structure and coalescent species delimitation of an endemic trapdoor spider genus, Stasimopus (Araneae, Mygalomorphae, Stasimopidae) in the Karoo region of South Africa. Mol Phylogenet Evol 2023; 184:107798. [PMID: 37094612 DOI: 10.1016/j.ympev.2023.107798] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Revised: 03/30/2023] [Accepted: 04/18/2023] [Indexed: 04/26/2023]
Abstract
The Karoo region of South Africa is a unique and sensitive ecosystem which is facing pressure for development due to economic incentives such as mining, farming and shale gas exploration. The species diversity of many taxa in the area is largely unknown. A phylogenetic analysis of the cork-lid trapdoor spider genus, Stasimopus (Stasimopidae) was undertaken in order to gain insight into the relationships between the species that may be present in the area. The species within Stasimopus are challenging to identify and define using traditional morphological methods due to a high degree of morphological conservatism within the genus. For this reason, multiple coalescent based species delimitation methods were used to attempt to determine the species present for Stasimopus in the region which was tested against the morphological identifications and genetic clades (based on CO1, 16S and EF-1ɣ). We tested single-locus methods Automatic Barcode Gap Discovery (ABGD), Bayesian implementation of Poisson Tree Processes (bPTP) and General Mixed Yule- Coalescent (GMYC), as well as multi-locus Brownie. The phylogenetic analysis of Stasimopus in the Karoo showed that there is a high degree of genetic diversity within the genus. The species delimitation results proved unfruitful for the genus, as they appear to delimit population structure rather than species for most methods. Alternative methods should be investigated to aid in the identification of the species in order truly understand the species diversity of the genus.
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Affiliation(s)
- Shannon Brandt
- Department of Zoology and Entomology, University of Pretoria, Hatfield, Pretoria, South Africa.
| | - Catherine Sole
- Department of Zoology and Entomology, University of Pretoria, Hatfield, Pretoria, South Africa.
| | - Robin Lyle
- Agricultural Research Council - Plant Health and Protection, Biosystematics, Roodeplaat, Pretoria, South Africa
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Mendes-Pereira T, de Araújo JPM, Kloss TG, Costa-Rezende DH, de Carvalho DS, Góes-Neto A. Disentangling the Taxonomy, Systematics, and Life History of the Spider-Parasitic Fungus Gibellula (Cordycipitaceae, Hypocreales). J Fungi (Basel) 2023; 9:jof9040457. [PMID: 37108911 PMCID: PMC10146611 DOI: 10.3390/jof9040457] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 03/28/2023] [Accepted: 04/06/2023] [Indexed: 04/29/2023] Open
Abstract
Gibellula (Cordycipitaceae, Hypocreales) is frequently observed growing on spiders, but little is known about their host range. One of the greatest challenges in describing these interactions is identifying the host, since the fungus often rapidly consumes the parasitised spiders and destroys important diagnostic taxonomic traits. Additionally, the global diversity of Gibellula remains unclear, as does the natural history and phylogenetic relationships of most of the species. Herein, we performed an extensive investigation on the species of Gibellula, reconstructed the most complete molecular phylogeny of the genus in the context of Cordycipitaceae, and performed a systematic review in order to provide the foundations towards a better understanding of the genus. Therefore, we have performed an integrative study to investigate the life history of the genus and to disentangle the questionable number of valid species proposed over time. We provided novel molecular data for published species that had not been sequenced before, such as G. mirabilis and G. mainsii, and evaluated all the original and modern morphological descriptions. In addition, we presented its global known distribution and compiled all available molecular data. We suggested a set of terms and morphological traits that should be considered in future descriptions of the genus and that a total of 31 species should be considered as accepted.
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Affiliation(s)
- Thairine Mendes-Pereira
- Laboratory of Molecular and Computational Biology of Fungi, Department of Microbiology, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, MG, Brazil
| | | | - Thiago Gechel Kloss
- Laboratory of Behavioral Ecology, Department of General Biology, Universidade Federal de Viçosa, Viçosa 36570-900, MG, Brazil
| | - Diogo Henrique Costa-Rezende
- Department of Biological Sciences, Universidade Estadual de Feira de Santana, Feira de Santana 44036-900, BA, Brazil
| | - Daniel Santana de Carvalho
- Laboratory of Mycology, Department of Microbiology, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte 31270-091, MG, Brazil
| | - Aristóteles Góes-Neto
- Laboratory of Molecular and Computational Biology of Fungi, Department of Microbiology, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, MG, Brazil
- Graduate Program in Bioinformatics, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, MG, Brazil
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35
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Zhang J, Li Z, Lai J, Zhang Z, Zhang F. A novel probe set for the phylogenomics and evolution of RTA spiders. Cladistics 2023; 39:116-128. [PMID: 36719825 DOI: 10.1111/cla.12523] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 12/10/2022] [Accepted: 12/21/2022] [Indexed: 02/01/2023] Open
Abstract
Spiders are important models for evolutionary studies of web building, sexual selection and adaptive radiation. The recent development of probes for UCE (ultra-conserved element)-based phylogenomic studies has shed light on the phylogeny and evolution of spiders. However, the two available UCE probe sets for spider phylogenomics (Spider and Arachnida probe sets) have relatively low capture efficiency within spiders, and are not optimized for the retrolateral tibial apophysis (RTA) clade, a hyperdiverse lineage that is key to understanding the evolution and diversification of spiders. In this study, we sequenced 15 genomes of species in the RTA clade, and using eight reference genomes, we developed a new UCE probe set (41 845 probes targeting 3802 loci, labelled as the RTA probe set). The performance of the RTA probes in resolving the phylogeny of the RTA clade was compared with the Spider and Arachnida probes through an in-silico test on 19 genomes. We also tested the new probe set empirically on 28 spider species of major spider lineages. The results showed that the RTA probes recovered twice and four times as many loci as the other two probe sets, and the phylogeny from the RTA UCEs provided higher support for certain relationships. This newly developed UCE probe set shows higher capture efficiency empirically and is particularly advantageous for phylogenomic and evolutionary studies of RTA clade and jumping spiders.
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Affiliation(s)
- Junxia Zhang
- Key Laboratory of Zoological Systematics and Application of Hebei Province, Institute of Life Science and Green Development, College of Life Sciences, Hebei University, Baoding, Hebei, 071002, China
| | - Zhaoyi Li
- Key Laboratory of Zoological Systematics and Application of Hebei Province, Institute of Life Science and Green Development, College of Life Sciences, Hebei University, Baoding, Hebei, 071002, China
| | - Jiaxing Lai
- Key Laboratory of Zoological Systematics and Application of Hebei Province, Institute of Life Science and Green Development, College of Life Sciences, Hebei University, Baoding, Hebei, 071002, China
| | - Zhisheng Zhang
- School of Life Sciences, Southwest University, Chongqing, 400700, China
| | - Feng Zhang
- Key Laboratory of Zoological Systematics and Application of Hebei Province, Institute of Life Science and Green Development, College of Life Sciences, Hebei University, Baoding, Hebei, 071002, China
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36
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Ramírez MJ, Wolff JO, Jäger P, Pavlek M, Pérez‐González A, Magalhaes I, Michalik P. Geometric regularity in webs of non-orb-weaving spiders. Ecol Evol 2023; 13:e9839. [PMID: 36937056 PMCID: PMC10019946 DOI: 10.1002/ece3.9839] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Revised: 01/27/2023] [Accepted: 01/31/2023] [Indexed: 03/18/2023] Open
Abstract
Geometric regularity of spider webs has been intensively studied in orb-weaving spiders, although it is not exclusive of orb weavers. Here, we document the geometrically regular, repetitive elements in the webs of the non-orb-weaving groups Leptonetidae and Telemidae for the first time. Similar to orb weavers, we found areas with regularly spaced parallel lines in the webs of Calileptoneta helferi, Sulcia sp., and cf. Pinelema sp. Furthermore, we provide a detailed account of the regular webs of Ochyrocera (Ochyroceratidae). The sections of the web with regularly disposed parallel lines are built as U-shaped modules reminiscent of orb webs. It has been suggested that the regularly spaced parallel lines in the webs of Ochyroceratidae and Psilodercidae may be produced in a single sweep of their posterior lateral spinnerets, which have regularly spaced aciniform gland spigots, perhaps involving expansion of the spinnerets. To test this hypothesis, we compared the spacing between parallel lines with the spacing between spigots, searched for expansible membranes in the spinnerets, and examined the junctions of regularly spaced lines. The distance between parallel lines was 10-20 times the distance between spigots, and we found no expansible membranes, and the intersection of parallel lines are cemented, which opposes the single sweep hypothesis. Furthermore, we found cues of viscid silk in the parallel lines of the psilodercid Althepus and broadened piriform gland spigots that may be responsible of its production. Finally, we evaluated the presence or absence of geometrically regular web elements across the spider tree of life. We found reports of regular webs in 31 spider families, including 20 families that are not orb weavers and hypothesize that the two basic aspects of regularity (parallel lines spaced at regular intervals, and radial lines spaced at regular angles) probably appeared many times in the evolution of spiders.
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Affiliation(s)
- Martín J. Ramírez
- Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”Consejo Nacional de Investigaciones Científicas y TécnicasBuenos AiresArgentina
| | - Jonas O. Wolff
- Zoological Institute and MuseumUniversity of GreifswaldGreifswaldGermany
| | - Peter Jäger
- Arachnology, Senckenberg Research InstituteFrankfurt am MainGermany
| | - Martina Pavlek
- Ruđer Bošković InstituteZagrebCroatia
- Croatian Biospeleological SocietyZagrebCroatia
| | - Abel Pérez‐González
- Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”Consejo Nacional de Investigaciones Científicas y TécnicasBuenos AiresArgentina
| | - Ivan Magalhaes
- Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”Consejo Nacional de Investigaciones Científicas y TécnicasBuenos AiresArgentina
| | - Peter Michalik
- Zoological Institute and MuseumUniversity of GreifswaldGreifswaldGermany
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37
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Davranoglou LR, Taylor GK, Mortimer B. Sexual selection and predation drive the repeated evolution of stridulation in Heteroptera and other arthropods. Biol Rev Camb Philos Soc 2023; 98:942-981. [PMID: 36787892 DOI: 10.1111/brv.12938] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 01/21/2023] [Accepted: 01/24/2023] [Indexed: 02/16/2023]
Abstract
Acoustic and substrate-borne vibrations are among the most widely used signalling modalities in animals. Arthropods display a staggering diversity of vibroacoustic organs generating acoustic sound and/or substrate-borne vibrations, and are fundamental to our broader understanding of the evolution of animal signalling. The primary mechanism that arthropods use to generate vibroacoustic signals is stridulation, which involves the rubbing together of opposing body parts. Although stridulation is common, its behavioural context and evolutionary drivers are often hard to pinpoint, owing to limited synthesis of empirical observations on stridulatory species. This is exacerbated by the diversity of mechanisms involved and the sparsity of their description in the literature, which renders their documentation a challenging task. Here, we present the most comprehensive review to date on the systematic distribution and behavioural context of stridulation. We use the megadiverse heteropteran insects as a model, together with multiple arthropod outgroups (arachnids, myriapods, and selected pancrustaceans). We find that stridulatory vibroacoustic signalling has evolved independently at least 84 times and is present in roughly 20% of Heteroptera, representing a remarkable case of convergent evolution. By studying the behavioural context of stridulation across Heteroptera and 189 outgroup lineages, we find that predation pressure and sexual selection are the main behaviours associated with stridulation across arthropods, adding further evidence for their role as drivers of large-scale signalling and morphological innovation in animals. Remarkably, the absence of tympanal ears in most Heteroptera suggests that they typically cannot detect the acoustic component of their stridulatory signals. This demonstrates that the adoption of new signalling modalities is not always correlated with the ability to perceive those signals, especially when these signals are directed towards interspecific receivers in defensive contexts. Furthermore, by mapping their morphology and systematic distribution, we show that stridulatory organs tend to evolve in specific body parts, likely originating from cleaning motions and pre-copulatory displays that are common to most arthropods. By synthesising our understanding of stridulation and stridulatory organs across major arthropod groups, we create the necessary framework for future studies to explore their systematic and behavioural significance, their potential role in sensory evolution and innovation, and the biomechanics of this mode of signalling.
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Affiliation(s)
| | - Graham K Taylor
- The John Krebs Field Station, University of Oxford, Wytham, Oxford, OX2 8QJ, UK
| | - Beth Mortimer
- The John Krebs Field Station, University of Oxford, Wytham, Oxford, OX2 8QJ, UK
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38
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Hazzi NA, Hormiga G. Molecular phylogeny of the tropical wandering spiders (Araneae, Ctenidae) and the evolution of eye conformation in the RTA clade. Cladistics 2023; 39:18-42. [PMID: 36200603 DOI: 10.1111/cla.12518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 08/22/2022] [Accepted: 08/25/2022] [Indexed: 01/13/2023] Open
Abstract
Tropical wandering spiders (Ctenidae) are a diverse group of cursorial predators with its greatest species richness in the tropics. Traditionally, Ctenidae are diagnosed based on the presence of eight eyes arranged in three rows (a 2-4-2 pattern). We present a molecular phylogeny of Ctenidae, including for the first time representatives of all of its subfamilies. The molecular phylogeny was inferred using five nuclear (histone H3, 28S, 18S, Actin and ITS-2) and four mitochondrial (NADH, COI, 12S and 16S) markers. The final matrix includes 259 terminals, 103 of which belong to Ctenidae and represent 28 of the current 49 described genera. We estimated divergence times by including fossils as calibration points and biogeographic events, and used the phylogenetic hypothesis obtained to reconstruct the evolution of the eye conformation in the retrolateral tibial apophysis (RTA) clade. Ctenidae and its main lineages originated during the Paleocene-Eocene and have diversified in the tropics since then. However, in some analyses Ctenidae was recovered as polyphyletic as the genus Ancylometes Bertkau, 1880 was placed as sister to Oxyopidae. Except for Acantheinae, in which the type genus Acantheis Thorell, 1891 is placed inside Cteninae, the four recognized subfamilies of Ctenidae are monophyletic in most analyses. The ancestral reconstruction of the ocular conformation in the retrolateral tibial apophysis clade suggests that the ocular pattern of Ctenidae has evolved convergently seven times and that it has originated from ocular conformations of two rows of four eyes (4-4) and the ocular pattern of lycosids (4-2-2). We also synonymize the monotypic genus Parabatinga Polotov & Brescovit, 2009 with Centroctenus Mello-Leitão, 1929. We discuss some of the putative morphological synapomorphies of the main ctenid lineages within the phylogenetic framework offered by the molecular phylogenetic results of the study.
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Affiliation(s)
- Nicolas A Hazzi
- Department of Biological Sciences, The George Washington University, 2029 G St. NW, Washington, DC, 20052, USA.,Fundación Ecotonos, Cra 72 No. 13ª-56, Cali, Colombia
| | - Gustavo Hormiga
- Department of Biological Sciences, The George Washington University, 2029 G St. NW, Washington, DC, 20052, USA
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39
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Gorneau JA, Rayor LS, Rheims CA, Moreau CS. Molecular, morphological, and life history data to support research of huntsman spiders (Araneae: Sparassidae). Data Brief 2023; 46:108885. [PMID: 36699733 PMCID: PMC9868322 DOI: 10.1016/j.dib.2023.108885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Revised: 10/31/2022] [Accepted: 01/02/2023] [Indexed: 01/07/2023] Open
Abstract
This article on biodiversity and life history data in huntsman spiders (Araneae: Sparassidae) includes the following: molecular data deposited on GenBank for 72 individuals representing 27 species in seven subfamilies, life history and behavioral data on 40 huntsman species from over two decades of observations, and morphological data for 26 species in the subfamily Deleninae as well as an undescribed representative of the genus Damastes. Molecular data include the nuclear genes histone H3 (H3) and 28S ribosomal RNA (28S rRNA), mitochondrial genes cytochrome c oxidase subunit I (COI) and 16S ribosomal RNA (16S rRNA) were sequenced via Sanger sequencing by J.A. Gorneau. Life history data were collected in the field and in the lab by L.S. Rayor and include data on age at sexual maturity, lifespan, social classification, egg sac shape, how the egg sac is attached or carried, retreat location, retreat modification, retreat size relative to adult female body size, approximate mean body mass, and mean cephalothorax width. Morphological data on Deleninae and one Damastes sp. were scored by C.A. Rheims and includes information on the following characters: prosoma (fovea, posterior eye row shape (PER), anterior median eye (AME) diameter, AME-AME and PME-PME interdistances), male palp (embolic sclerite (PS), conductor sclerotized base (SB), tegular apophysis (TA), flange (f)) and female epigyne and vulva (epigynal sclerite (ES), spermathecal sacs (SS)). These data were used to clarify relationships among the Australian endemic Deleninae, as well as global patterns in sparassid evolution. The data demonstrate phylogenetic patterns in life history, social evolution, and natural history among the sparassids. These data contribute to future comparative research on sparassid systematics, evolution, and behavior. This data article complements a research article published in Molecular Phylogenetics and Evolution [1].
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Affiliation(s)
- Jacob A. Gorneau
- Department of Entomology, Cornell University, Ithaca, NY, United States 14853
- Institute for Biodiversity Science and Sustainability, California Academy of Sciences, 55 Music Concourse Drive, San Francisco, CA, United States 94118
- Corresponding author. @jacobgorneau
| | - Linda S. Rayor
- Department of Entomology, Cornell University, Ithaca, NY, United States 14853
| | - Cristina A. Rheims
- Laboratório de Coleções Zoológicas, Instituto Butantan, Av. Vital Brasil, 1500, 05503-900 São Paulo, SP, Brazil
| | - Corrie S. Moreau
- Department of Entomology, Cornell University, Ithaca, NY, United States 14853
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, United States 14853
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40
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Morales ME, Goloboff PA. New TNT routines for parallel computing with MPI. Mol Phylogenet Evol 2023; 178:107643. [PMID: 36216302 DOI: 10.1016/j.ympev.2022.107643] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Revised: 09/26/2022] [Accepted: 10/04/2022] [Indexed: 11/21/2022]
Abstract
Phylogenetic inference, which involves time-consuming calculations, is a field where parallelization can speed up the resolution of many problems. TNT (a widely used program for phylogenetic analysis under parsimony) allows parallelization under the PVM system (Parallel Virtual Machine). However, as the basic aspects of the implementation remain unpublished, few studies have taken advantage of the parallelization routines of TNT. In addition, the PVM system is deprecated by many system administrators. One of the most common standards for high performance computing is now MPI (Message Passing Interface). To facilitate the use of the parallel analyses offered by TNT, this paper describes the basic aspects of the implementation, as well as a port of the parallelization interface of TNT into MPI. The use of the new routines is illustrated by reanalysis of seven significant datasets, either recent phylogenomic datasets with many characters (up to 2,509,064 characters) or datasets with large numbers of taxa (up to 13,921 taxa). Versions of TNT including the MPI functionality are available at: http://www.lillo.org.ar/phylogeny/tnt/.
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Affiliation(s)
- Martín E Morales
- Unidad Ejecutora Lillo (Fundación Miguel Lillo - Consejo Nacional de Investigaciones Científicas y Técnicas), Miguel Lillo 251, S. M. de Tucumán 4000, Argentina
| | - Pablo A Goloboff
- Unidad Ejecutora Lillo (Fundación Miguel Lillo - Consejo Nacional de Investigaciones Científicas y Técnicas), Miguel Lillo 251, S. M. de Tucumán 4000, Argentina; American Museum of Natural History, Central Park West at 79th Street, New York, United States.
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Wilson JD, Bond JE, Harvey MS, Ramírez MJ, Rix MG. Correlation with a limited set of behavioral niches explains the convergence of somatic morphology in mygalomorph spiders. Ecol Evol 2023; 13:e9706. [PMID: 36636427 PMCID: PMC9830016 DOI: 10.1002/ece3.9706] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 12/06/2022] [Accepted: 12/15/2022] [Indexed: 01/11/2023] Open
Abstract
Understanding the drivers of morphological convergence requires investigation into its relationship with behavior and niche space, and such investigations in turn provide insights into evolutionary dynamics, functional morphology, and life history. Mygalomorph spiders (trapdoor spiders and their kin) have long been associated with high levels of morphological homoplasy, and many convergent features can be intuitively associated with different behavioral niches. Using genus-level phylogenies based on recent genomic studies and a newly assembled matrix of discrete behavioral and somatic morphological characters, we reconstruct the evolution of burrowing behavior in the Mygalomorphae, compare the influence of behavior and evolutionary history on somatic morphology, and test hypotheses of correlated evolution between specific morphological features and behavior. Our results reveal the simplicity of the mygalomorph adaptive landscape, with opportunistic, web-building taxa at one end, and burrowing/nesting taxa with structurally modified burrow entrances (e.g., a trapdoor) at the other. Shifts in behavioral niche, in both directions, are common across the evolutionary history of the Mygalomorphae, and several major clades include taxa inhabiting both behavioral extremes. Somatic morphology is heavily influenced by behavior, with taxa inhabiting the same behavioral niche often more similar morphologically than more closely related but behaviorally divergent taxa, and we were able to identify a suite of 11 somatic features that show significant correlation with particular behaviors. We discuss these findings in light of the function of particular morphological features, niche dynamics within the Mygalomorphae, and constraints on the mygalomorph adaptive landscape relative to other spiders.
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Affiliation(s)
- Jeremy D. Wilson
- Biodiversity and Geosciences ProgramQueensland Museum Collections and Research CentreHendraQueenslandAustralia
| | - Jason E. Bond
- Department of Entomology and NematologyUniversity of CaliforniaDavisCaliforniaUSA
| | - Mark S. Harvey
- Collections and ResearchWestern Australian MuseumWelshpoolWestern AustraliaAustralia
- School of Biological SciencesUniversity of Western AustraliaCrawleyWestern AustraliaAustralia
| | - Martín J. Ramírez
- Museo Argentino de Ciencias NaturalesConsejo Nacional de Investigaciones Científicas y TécnicasBuenos AiresArgentina
| | - Michael G. Rix
- Biodiversity and Geosciences ProgramQueensland Museum Collections and Research CentreHendraQueenslandAustralia
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Keimasi M, Salehifard K, Keimasi M, Amirsadri M, Esfahani NMJ, Moradmand M, Esmaeili F, Mofid MR. Alleviation of cognitive deficits in a rat model of glutamate-induced excitotoxicity, using an N-type voltage-gated calcium channel ligand, extracted from Agelena labyrinthica crude venom. Front Mol Neurosci 2023; 16:1123343. [PMID: 36873105 PMCID: PMC9981952 DOI: 10.3389/fnmol.2023.1123343] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Accepted: 02/06/2023] [Indexed: 02/19/2023] Open
Abstract
Excitotoxicity is a common pathological process in Alzheimer's disease (AD) which is caused by the over-activity of N-Methyl-D-Aspartate receptors (NMDARs). The release of neurotransmitters depends on the activity of voltage-gated calcium channels (VGCCs). Hyper-stimulation of NMDARs can enhance the releasement of neurotransmitters through the VGCCs. This malfunction of channels can be blocked by selective and potent N-type VGCCs ligand. Under excitotoxicity condition, glutamate has negative effects on the pyramidal cells of the hippocampus, which ends in synaptic loss and elimination of these cells. These events leads to learning and memory elimination through the hippocampus circuit's dysfunction. A suitable ligand has a high affinity to receptor or channel and is selective for its target. The bioactive small proteins of venom have these characteristics. Therefore, peptides and small proteins of animal venom are precious sources for pharmacological applications. The omega-agatoxin-Aa2a was purified, and identified from Agelena labyrinthica specimens, as an N-type VGCCs ligand for this study. The effect of the omega-agatoxin-Aa2a on the glutamate-induced excitotoxicity in rats was evaluated through behavioral tests including Morris Water Maze, and Passive avoidance. The syntaxin1A (SY1A), synaptotagmin1 (SYT1), and synaptophysin (SYN) genes expression were measured via Real-Time PCR. The local expression of synaptosomal-associated protein, 25 k Da (SNAP-25) was visualized using an immunofluorescence assay for synaptic quantification. Electrophysiological amplitude of field excitatory postsynaptic potentials (fEPSPs) in the input-output and LTP curves of mossy fiber were recorded. The cresyl violet staining of hippocampus sections was performed for the groups. Our results demonstrated that the omega-agatoxin-Aa2a treatment could recover the learning, and memory impairment caused by NMDA-induced excitotoxicity in rat hippocampus.
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Affiliation(s)
- Mohammad Keimasi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Kowsar Salehifard
- Department of Physiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Mohammadjavad Keimasi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Mohammadreza Amirsadri
- Department of Clinical Pharmacy and Pharmacy Practice, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Noushin Mirshah Jafar Esfahani
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Majid Moradmand
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Fariba Esmaeili
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Mohammad Reza Mofid
- Department of Clinical Biochemistry, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran
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Keimasi M, Salehifard K, Shahidi M, Esmaeili F, Mirshah Jafar Esfahani N, Beheshti S, Amirsadri M, Naseri F, Keimasi M, Ghorbani N, Mofid MR, Moradmand M. Ameliorative effects of omega-lycotoxin-Gsp2671e purified from the spider venom of Lycosa praegrandis on memory deficits of glutamate-induced excitotoxicity rat model. Front Pharmacol 2022; 13:1048563. [PMID: 36588719 PMCID: PMC9800828 DOI: 10.3389/fphar.2022.1048563] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Accepted: 12/07/2022] [Indexed: 12/23/2022] Open
Abstract
Memory impairment is one of the main complications of Alzheimer's disease (AD). This condition can be induced by hyper-stimulation of N-Methyl-D-aspartate receptors (NMDARs) of glutamate in the hippocampus, which ends up to pyramidal neurons determination. The release of neurotransmitters relies on voltage-gated calcium channels (VGCCs) such as P/Q-types. Omega-lycotoxin-Gsp2671e (OLG1e) is a P/Q-type VGCC modulator with high affinity and selectivity. This bio-active small protein was purified and identified from the Lycosa praegrandis venom. The effect of this state-dependent low molecular weight P/Q-type calcium modulator on rats was investigated via glutamate-induced excitotoxicity by N-Methyl-D-aspartate. Also, Electrophysiological amplitude of field excitatory postsynaptic potentials (fEPSPs) in the input-output and Long-term potentiation (LTP) curves were recorded in mossy fiber and the amount of synaptophysin (SYN), synaptosomal-associated protein, 25 kDa (SNAP-25), and synaptotagmin 1(SYT1) genes expression were measured using Real-time PCR technique for synaptic quantification. The outcomes of the current study suggest that OLG1e as a P/Q-type VGCC modulator has an ameliorative effect on excitotoxicity-induced memory defects and prevents the impairment of pyramidal neurons in the rat hippocampus.
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Affiliation(s)
- Mohammad Keimasi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran,*Correspondence: Majid Moradmand, ; Mohammad Reza Mofid, ; Mohammad Keimasi,
| | - Kowsar Salehifard
- Department of Physiology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Marzieh Shahidi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Fariba Esmaeili
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Noushin Mirshah Jafar Esfahani
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Siamak Beheshti
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Mohammadreza Amirsadri
- Department of Clinical Pharmacy and Pharmacy Practice, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran
| | - Faezeh Naseri
- Department of Clinical Biochemistry, Faculty of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Mohammadjavad Keimasi
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Najmeh Ghorbani
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran
| | - Mohammad Reza Mofid
- Department of Clinical Biochemistry, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran,*Correspondence: Majid Moradmand, ; Mohammad Reza Mofid, ; Mohammad Keimasi,
| | - Majid Moradmand
- Department of Plant and Animal Biology, Faculty of Biological Sciences and Technology, University of Isfahan, Isfahan, Iran,*Correspondence: Majid Moradmand, ; Mohammad Reza Mofid, ; Mohammad Keimasi,
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Correa-Garhwal SM, Baker RH, Clarke TH, Ayoub NA, Hayashi CY. The evolutionary history of cribellate orb-weaver capture thread spidroins. BMC Ecol Evol 2022; 22:89. [PMID: 35810286 PMCID: PMC9270836 DOI: 10.1186/s12862-022-02042-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Accepted: 06/21/2022] [Indexed: 11/19/2022] Open
Abstract
Background Spiders have evolved two types of sticky capture threads: one with wet adhesive spun by ecribellate orb-weavers and another with dry adhesive spun by cribellate spiders. The evolutionary history of cribellate capture threads is especially poorly understood. Here, we use genomic approaches to catalog the spider-specific silk gene family (spidroins) for the cribellate orb-weaver Uloborus diversus. Results We show that the cribellar spidroin, which forms the puffy fibrils of cribellate threads, has three distinct repeat units, one of which is conserved across cribellate taxa separated by ~ 250 Mya. We also propose candidates for a new silk type, paracribellar spidroins, which connect the puffy fibrils to pseudoflagelliform support lines. Moreover, we describe the complete repeat architecture for the pseudoflagelliform spidroin (Pflag), which contributes to extensibility of pseudoflagelliform axial fibers. Conclusions Our finding that Pflag is closely related to Flag, supports homology of the support lines of cribellate and ecribellate capture threads. It further suggests an evolutionary phase following gene duplication, in which both Flag and Pflag were incorporated into the axial lines, with subsequent loss of Flag in uloborids, and increase in expression of Flag in ecribellate orb-weavers, explaining the distinct mechanical properties of the axial lines of these two groups. Supplementary Information The online version contains supplementary material available at 10.1186/s12862-022-02042-5.
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Wang S, Lu Y, Li Y, Li S, Lin Y. Systematic notes on three troglobitic Anapistula (Araneae, Symphytognathidae) spiders from China, with the descriptions of two new species. Zookeys 2022; 1130:167-189. [PMID: 36761017 PMCID: PMC9836665 DOI: 10.3897/zookeys.1130.91467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 10/27/2022] [Indexed: 11/23/2022] Open
Abstract
Three cave-dwelling spider species belonging to the family Symphytognathidae Hickman, 1931, i.e., Anapistulasanjiao sp. nov. (♂♀), A.walayaku sp. nov. (♂♀), and A.panensis Lin, Tao & Li, 2013 (♂♀), are reported from southwest China. DNA sequences and detailed illustrations of the habitus, male palps and epigynes are provided, and their distributions are mapped. Their phylogenetic position within symphytognathids and relationships were tested and assessed using previously published phylogenetic analyses on symphytognathoids. The results showed that they form a clade with A.choojaiae Rivera-Quiroz, Petcharad & Miller, 2021 from Thailand.
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Affiliation(s)
- Shuqiao Wang
- Key Laboratory of Bio-resources and Eco-environment (Ministry of Education), College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Ying Lu
- The Sichuan Key Laboratory for Conservation Biology of Endangered Wildlife, Sichuan University, Chengdu, Sichuan 610064, China
| | - Ya Li
- Key Laboratory of Bio-resources and Eco-environment (Ministry of Education), College of Life Sciences, Sichuan University, Chengdu 610065, China
| | - Shuqiang Li
- The Sichuan Key Laboratory for Conservation Biology of Endangered Wildlife, Sichuan University, Chengdu, Sichuan 610064, China
| | - Yucheng Lin
- Key Laboratory of Bio-resources and Eco-environment (Ministry of Education), College of Life Sciences, Sichuan University, Chengdu 610065, China
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Král J, Ávila Herrera IM, Šťáhlavský F, Sadílek D, Pavelka J, Chatzaki M, Huber BA. Karyotype differentiation and male meiosis in European clades of the spider genus Pholcus (Araneae, Pholcidae). COMPARATIVE CYTOGENETICS 2022; 16:185-209. [PMID: 36760487 PMCID: PMC9836407 DOI: 10.3897/compcytogen.v16i4.85059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 09/28/2022] [Indexed: 06/18/2023]
Abstract
Haplogyne araneomorphs are a diverse spider clade. Their karyotypes are usually predominated by biarmed (i.e., metacentric and submetacentric) chromosomes and have a specific sex chromosome system, X1X2Y. These features are probably ancestral for haplogynes. Nucleolus organizer regions (NORs) spread frequently from autosomes to sex chromosomes in these spiders. This study focuses on pholcids (Pholcidae), a highly diverse haplogyne family. Despite considerable recent progress in pholcid cytogenetics, knowledge on many clades remains insufficient including the most species-rich pholcid genus, Pholcus Walckenaer, 1805. To characterize the karyotype differentiation of Pholcus in Europe, we compared karyotypes, sex chromosomes, NORs, and male meiosis of seven species [P.alticeps Spassky, 1932; P.creticus Senglet, 1971; P.dentatus Wunderlich, 1995; P.fuerteventurensis Wunderlich, 1992; P.phalangioides (Fuesslin, 1775); P.opilionoides (Schrank, 1781); P.silvai Wunderlich, 1995] representing the dominant species groups in this region. The species studied show several features ancestral for Pholcus, namely the 2n♂ = 25, the X1X2Y system, and a karyotype predominated by biarmed chromosomes. Most taxa have a large acrocentric NOR-bearing pair, which evolved from a biarmed pair by a pericentric inversion. In some lineages, the acrocentric pair reverted to biarmed. Closely related species often differ in the morphology of some chromosome pairs, probably resulting from pericentric inversions and/or translocations. Such rearrangements have been implicated in the formation of reproductive barriers. While the X1 and Y chromosomes retain their ancestral metacentric morphology, the X2 chromosome shows a derived (acrocentric or subtelocentric) morphology. Pairing of this element is usually modified during male meiosis. NOR patterns are very diverse. The ancestral karyotype of Pholcus contained five or six terminal NORs including three X chromosome-linked loci. The number of NORs has been frequently reduced during evolution. In the Macaronesian clade, there is only a single NOR-bearing pair. Sex chromosome-linked NORs are lost in Madeiran species and in P.creticus. Our study revealed two cytotypes in the synanthropic species P.phalangioides (Madeiran and Czech), which differ by their NOR pattern and chromosome morphology. In the Czech cytotype, the large acrocentric pair was transformed into a biarmed pair by pericentric inversion.
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Affiliation(s)
- Jiří Král
- Laboratory of Arachnid Cytogenetics, Department of Genetics and Microbiology, Faculty of Science, Charles University, Viničná 5, 128 44 Prague 2, Czech RepublicCharles UniversityPragueCzech Republic
| | - Ivalú M. Ávila Herrera
- Laboratory of Arachnid Cytogenetics, Department of Genetics and Microbiology, Faculty of Science, Charles University, Viničná 5, 128 44 Prague 2, Czech RepublicCharles UniversityPragueCzech Republic
| | - František Šťáhlavský
- Laboratory of Arachnid Cytogenetics, Department of Genetics and Microbiology, Faculty of Science, Charles University, Viničná 5, 128 44 Prague 2, Czech RepublicCharles UniversityPragueCzech Republic
| | - David Sadílek
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 44 Prague 2, Czech RepublicCharles UniversityPrague 2Czech Republic
| | - Jaroslav Pavelka
- Centre of Biology, Geosciences and Environmental Education, University of West Bohemia, Univerzitní 8, 306 14 Plzeň, Czech RepublicUniversity of West BohemiaPlzeňCzech Republic
| | - Maria Chatzaki
- Department of Molecular Biology and Genetics, Democritus University of Thrace, 68100 Alexandroupolis, GreeceDemocritus University of ThraceAlexandroupolisGreece
| | - Bernhard A. Huber
- Alexander Koenig Zoological Research Museum, Adenauerallee 127, 53113 Bonn, GermanyAlexander Koenig Zoological Research MuseumBonnGermany
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Fischer A, Gries R, Alamsetti SK, Hung E, Roman Torres AC, Fernando Y, Meraj S, Ren W, Britton R, Gries G. Origin, structure and functional transition of sex pheromone components in a false widow spider. Commun Biol 2022; 5:1156. [DOI: 10.1038/s42003-022-04072-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Accepted: 10/04/2022] [Indexed: 11/09/2022] Open
Abstract
AbstractFemale web-building spiders disseminate pheromone from their webs that attracts mate-seeking males and deposit contact pheromone on their webs that induces courtship by males upon arrival. The source of contact and mate attractant pheromone components, and the potential ability of females to adjust their web’s attractiveness, have remained elusive. Here, we report three new contact pheromone components produced by female false black widow spiders, Steatoda grossa: N-4-methylvaleroyl-O-butyroyl-L-serine, N-4-methylvaleroyl-O-isobutyroyl-L-serine and N-4-methylvaleroyl-O-hexanoyl-L-serine. The compounds originate from the posterior aggregate silk gland, induce courtship by males, and web pH-dependently hydrolyse at the carboxylic-ester bond, giving rise to three corresponding carboxylic acids that attract males. A carboxyl ester hydrolase (CEH) is present on webs and likely mediates the functional transition of contact sex pheromone components to the carboxylic acid mate attractant pheromone components. As CEH activity is pH-dependent, and female spiders can manipulate their silk’s pH, they might also actively adjust their webs’ attractiveness.
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48
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Zhong Y, Gong X, Yu H. A new species of the Clubionacorticalis-group (Araneae, Clubionidae) from Jiugong Mountains, Hubei Province, central China. Biodivers Data J 2022; 10:e94735. [PMID: 36761625 PMCID: PMC9836621 DOI: 10.3897/bdj.10.e94735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Accepted: 10/18/2022] [Indexed: 11/12/2022] Open
Abstract
Background The corticalis group is one of most diverse species-group in genus Clubiona Latreille, 1804. Currently, a total of 81 corticalis group species are known worldwide, amongst them 67 were recorded from China. However, the diversity of this group in China is still insufficiently known. New information Clubionaxianning sp. nov. is described as a new species of the C.corticalis species-group collected from Hubei Province, China.
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Affiliation(s)
- Yang Zhong
- Administrative Commission of Jiugongshan National Nature Reserve of Hubei Xianning, Xianning, ChinaAdministrative Commission of Jiugongshan National Nature Reserve of Hubei XianningXianningChina,School of Nuclear Technology and Chemistry & Biology, Hubei University of Science and Technology, Xianning, ChinaSchool of Nuclear Technology and Chemistry & Biology, Hubei University of Science and TechnologyXianningChina
| | - Xusheng Gong
- School of Nuclear Technology and Chemistry & Biology, Hubei University of Science and Technology, Xianning, ChinaSchool of Nuclear Technology and Chemistry & Biology, Hubei University of Science and TechnologyXianningChina
| | - Hao Yu
- School of Life Sciences, Guizhou Normal University, Guiyang, ChinaSchool of Life Sciences, Guizhou Normal UniversityGuiyangChina
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Zhang M, Ma N, Jiang Z, Xiao Y, Liu K. A new species of Orthobula Simon, 1897 (Araneae, Trachelidae) from South China. Biodivers Data J 2022; 10:e94202. [PMID: 36761584 PMCID: PMC9836638 DOI: 10.3897/bdj.10.e94202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Accepted: 10/08/2022] [Indexed: 11/12/2022] Open
Abstract
Background Only one trachelid species, Trachelassinensis Chen, Peng & Zhao, 1995 has been recorded from Jiangxi Province to date. New information A new species, Orthobulajiangxi Liu, sp. n., is described from Jiangxi Province of China, based on both sexes. Morphological illustrations are provided and its distribution is mapped.
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Affiliation(s)
- Mengzhen Zhang
- College of Life Science, Jinggangshan University, Ji'an, ChinaCollege of Life Science, Jinggangshan UniversityJi'anChina
| | - Ning Ma
- College of Life Science, Jinggangshan University, Ji'an, ChinaCollege of Life Science, Jinggangshan UniversityJi'anChina
| | - Zimin Jiang
- College of Life Science, Jinggangshan University, Ji'an, ChinaCollege of Life Science, Jinggangshan UniversityJi'anChina
| | - Yonghong Xiao
- College of Life Science, Jinggangshan University, Ji'an, ChinaCollege of Life Science, Jinggangshan UniversityJi'anChina
| | - Keke Liu
- College of Life Science, Jinggangshan University, Ji'an, ChinaCollege of Life Science, Jinggangshan UniversityJi'anChina
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50
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Arakawa K, Kono N, Malay AD, Tateishi A, Ifuku N, Masunaga H, Sato R, Tsuchiya K, Ohtoshi R, Pedrazzoli D, Shinohara A, Ito Y, Nakamura H, Tanikawa A, Suzuki Y, Ichikawa T, Fujita S, Fujiwara M, Tomita M, Blamires SJ, Chuah JA, Craig H, Foong CP, Greco G, Guan J, Holland C, Kaplan DL, Sudesh K, Mandal BB, Norma-Rashid Y, Oktaviani NA, Preda RC, Pugno NM, Rajkhowa R, Wang X, Yazawa K, Zheng Z, Numata K. 1000 spider silkomes: Linking sequences to silk physical properties. SCIENCE ADVANCES 2022; 8:eabo6043. [PMID: 36223455 PMCID: PMC9555773 DOI: 10.1126/sciadv.abo6043] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Accepted: 08/19/2022] [Indexed: 06/16/2023]
Abstract
Spider silks are among the toughest known materials and thus provide models for renewable, biodegradable, and sustainable biopolymers. However, the entirety of their diversity still remains elusive, and silks that exceed the performance limits of industrial fibers are constantly being found. We obtained transcriptome assemblies from 1098 species of spiders to comprehensively catalog silk gene sequences and measured the mechanical, thermal, structural, and hydration properties of the dragline silks of 446 species. The combination of these silk protein genotype-phenotype data revealed essential contributions of multicomponent structures with major ampullate spidroin 1 to 3 paralogs in high-performance dragline silks and numerous amino acid motifs contributing to each of the measured properties. We hope that our global sampling, comprehensive testing, integrated analysis, and open data will provide a solid starting point for future biomaterial designs.
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Affiliation(s)
- Kazuharu Arakawa
- Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan
- Faculty of Environment and Information Studies, Keio University, Fujisawa, Kanagawa 252-8520, Japan
- Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa 252-8520, Japan
- Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan
| | - Nobuaki Kono
- Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan
- Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa 252-8520, Japan
| | - Ali D. Malay
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
| | - Ayaka Tateishi
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Department of Material Chemistry, Kyoto University, Nishikyo, Kyoto 615-8510, Japan
| | - Nao Ifuku
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
| | - Hiroyasu Masunaga
- Japan Synchrotron Radiation Research Institute, Sayo-gun, Hyogo 679-5198, Japan
| | - Ryota Sato
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Spiber Inc., Tsuruoka, Yamagata 997-0052, Japan
| | - Kousuke Tsuchiya
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Department of Material Chemistry, Kyoto University, Nishikyo, Kyoto 615-8510, Japan
| | - Rintaro Ohtoshi
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Spiber Inc., Tsuruoka, Yamagata 997-0052, Japan
| | | | | | - Yusuke Ito
- Spiber Inc., Tsuruoka, Yamagata 997-0052, Japan
| | - Hiroyuki Nakamura
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Spiber Inc., Tsuruoka, Yamagata 997-0052, Japan
| | - Akio Tanikawa
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Yayoi, Bunkyo, Tokyo 113-8657, Japan
| | - Yuya Suzuki
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tennodai, Tsukuba, Ibaraki 305-8572, Japan
- The United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto, Kagoshima 890-0065, Japan
| | - Takeaki Ichikawa
- Kokugakuin Kugayama High School, Suginami, Tokyo 168-0082, Japan
| | - Shohei Fujita
- Graduate School of Agriculture, Saga University, Saga 840-8502, Japan
| | - Masayuki Fujiwara
- Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan
| | - Masaru Tomita
- Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan
- Faculty of Environment and Information Studies, Keio University, Fujisawa, Kanagawa 252-8520, Japan
- Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa 252-8520, Japan
| | - Sean J. Blamires
- Evolution and Ecology Research Centre, University of New South Wales, Sydney, NSW 2052, Australia
| | - Jo-Ann Chuah
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
| | - Hamish Craig
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Evolution and Ecology Research Centre, University of New South Wales, Sydney, NSW 2052, Australia
| | - Choon P. Foong
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Department of Material Chemistry, Kyoto University, Nishikyo, Kyoto 615-8510, Japan
| | - Gabriele Greco
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Via Mesiano 77, I-38123 Trento, Italy
| | - Juan Guan
- Beijing Advanced Innovation Center for Biomedical Engineering, School of Materials Science and Engineering, Beihang University, Beijing 100191, China
| | - Chris Holland
- Natural Materials Group, Department of Materials Science and Engineering, The University of Sheffield, Mappin Street, Sheffield S1 3JD, UK
| | - David L. Kaplan
- Department of Biomedical Engineering, Tufts University, Medford, MA 02155, USA
| | - Kumar Sudesh
- School of Biological Sciences, Universiti Sains Malaysia, 11800 Penang, Malaysia
| | - Biman B. Mandal
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati (IITG), Guwahati, 781 039 Assam, India
- Center for Nanotechnology, IITG, Guwahati, 781 039 Assam, India
- School of Health Sciences and Technology, IITG, Guwahati, 781 039 Assam, India
| | - Y. Norma-Rashid
- Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia
| | - Nur A. Oktaviani
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
| | - Rucsanda C. Preda
- Department of Biomedical Engineering, Tufts University, Medford, MA 02155, USA
| | - Nicola M. Pugno
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Via Mesiano 77, I-38123 Trento, Italy
- School of Engineering and Materials Science, Queen Mary University of London, Mile End Road, E1 4NS London, UK
| | - Rangam Rajkhowa
- Institute for Frontier Materials, Deakin University, Waurn Ponds, VIC 3216, Australia
| | - Xiaoqin Wang
- College of Textile and Clothing Engineering, Soochow University, Suzhou 215123, China
| | - Kenjiro Yazawa
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
| | - Zhaozhu Zheng
- College of Textile and Clothing Engineering, Soochow University, Suzhou 215123, China
| | - Keiji Numata
- Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, Wako, Saitama 351-0198, Japan
- Department of Material Chemistry, Kyoto University, Nishikyo, Kyoto 615-8510, Japan
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