• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4605581)   Today's Articles (0)   Subscriber (49373)
For: Westfall KM, Therriault TW, Abbott CL. A new approach to molecular biosurveillance of invasive species using DNA metabarcoding. Glob Chang Biol 2020;26:1012-1022. [PMID: 31657513 DOI: 10.1111/gcb.14886] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Revised: 09/10/2019] [Accepted: 10/17/2019] [Indexed: 06/10/2023]
Number Cited by Other Article(s)
1
Hakimzadeh A, Asbun AA, Albanese D, Bernard M, Buchner D, Callahan B, Caporaso JG, Curd E, Djemiel C, Durling MB, Elbrecht V, Gold Z, Gweon HS, Hajibabaei M, Hildebrand F, Mikryukov V, Normandeau E, Özkurt E, Palmer JM, Pascal G, Porter TM, Straub D, Vasar M, Větrovský T, Zafeiropoulos H, Anslan S. A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses. Mol Ecol Resour 2024;24:e13847. [PMID: 37548515 PMCID: PMC10847385 DOI: 10.1111/1755-0998.13847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 06/05/2023] [Accepted: 07/06/2023] [Indexed: 08/08/2023]
2
Mu Y, Zhang J, Yang J, Wu J, Zhang Y, Yu H, Zhang X. Enhancing amphibian biomonitoring through eDNA metabarcoding. Mol Ecol Resour 2024;24:e13931. [PMID: 38345249 DOI: 10.1111/1755-0998.13931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 01/03/2024] [Accepted: 01/10/2024] [Indexed: 02/17/2024]
3
McGaughran A, Dhami MK, Parvizi E, Vaughan AL, Gleeson DM, Hodgins KA, Rollins LA, Tepolt CK, Turner KG, Atsawawaranunt K, Battlay P, Congrains C, Crottini A, Dennis TPW, Lange C, Liu XP, Matheson P, North HL, Popovic I, Rius M, Santure AW, Stuart KC, Tan HZ, Wang C, Wilson J. Genomic Tools in Biological Invasions: Current State and Future Frontiers. Genome Biol Evol 2024;16:evad230. [PMID: 38109935 PMCID: PMC10776249 DOI: 10.1093/gbe/evad230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 11/16/2023] [Accepted: 12/12/2023] [Indexed: 12/20/2023]  Open
4
Shashank PR, Parker BM, Rananaware SR, Plotkin D, Couch C, Yang LG, Nguyen LT, Prasannakumar NR, Braswell WE, Jain PK, Kawahara AY. CRISPR-based diagnostics detects invasive insect pests. Mol Ecol Resour 2024;24:e13881. [PMID: 37888995 PMCID: PMC10842307 DOI: 10.1111/1755-0998.13881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Revised: 08/24/2023] [Accepted: 09/28/2023] [Indexed: 10/28/2023]
5
Emerson BC, Borges PAV, Cardoso P, Convey P, deWaard JR, Economo EP, Gillespie RG, Kennedy S, Krehenwinkel H, Meier R, Roderick GK, Strasberg D, Thébaud C, Traveset A, Creedy TJ, Meramveliotakis E, Noguerales V, Overcast I, Morlon H, Papadopoulou A, Vogler AP, Arribas P, Andújar C. Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands. Mol Ecol 2023;32:6161-6176. [PMID: 36156326 DOI: 10.1111/mec.16683] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 08/11/2022] [Accepted: 08/19/2022] [Indexed: 12/01/2022]
6
Carvalho S, Shchepanik H, Aylagas E, Berumen ML, Costa FO, Costello MJ, Duarte S, Ferrario J, Floerl O, Heinle M, Katsanevakis S, Marchini A, Olenin S, Pearman JK, Peixoto RS, Rabaoui LJ, Ruiz G, Srėbalienė G, Therriault TW, Vieira PE, Zaiko A. Hurdles and opportunities in implementing marine biosecurity systems in data-poor regions. Bioscience 2023;73:494-512. [PMID: 37560322 PMCID: PMC10408360 DOI: 10.1093/biosci/biad056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Revised: 05/26/2023] [Accepted: 06/06/2023] [Indexed: 08/11/2023]  Open
7
Chen J, Zhang T, Sun L, Liu Y, Li D, Leng X, An S. Abundance trade-offs and dominant taxa maintain the stability of the bacterioplankton community underlying Microcystis blooms. Front Microbiol 2023;14:1181341. [PMID: 37275174 PMCID: PMC10235547 DOI: 10.3389/fmicb.2023.1181341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Accepted: 05/09/2023] [Indexed: 06/07/2023]  Open
8
Shashank PR, Parker BM, Rananaware SR, Plotkin D, Couch C, Yang LG, Nguyen LT, Prasannakumar NR, Braswell WE, Jain PK, Kawahara AY. CRISPR-based diagnostics detects invasive insect pests. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.05.16.541004. [PMID: 37292907 PMCID: PMC10245733 DOI: 10.1101/2023.05.16.541004] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
9
Shea MM, Kuppermann J, Rogers MP, Smith DS, Edwards P, Boehm AB. Systematic review of marine environmental DNA metabarcoding studies: toward best practices for data usability and accessibility. PeerJ 2023;11:e14993. [PMID: 36992947 PMCID: PMC10042160 DOI: 10.7717/peerj.14993] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 02/12/2023] [Indexed: 03/31/2023]  Open
10
Hao R, Liu Y, Shen W, Zhao R, Jiang B, Song H, Yan M, Ma H. Surveillance of emerging infectious diseases for biosecurity. SCIENCE CHINA LIFE SCIENCES 2022;65:1504-1516. [PMID: 35287183 PMCID: PMC8918423 DOI: 10.1007/s11427-021-2071-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Accepted: 01/26/2022] [Indexed: 12/03/2022]
11
Haubrock PJ, Ahmed DA, Cuthbert RN, Stubbington R, Domisch S, Marquez JRG, Beidas A, Amatulli G, Kiesel J, Shen LQ, Soto I, Angeler DG, Bonada N, Cañedo-Argüelles M, Csabai Z, Datry T, de Eyto E, Dohet A, Drohan E, England J, Feio MJ, Forio MAE, Goethals P, Graf W, Heino J, Hudgins EJ, Jähnig SC, Johnson RK, Larrañaga A, Leitner P, L'Hoste L, Lizee MH, Maire A, Rasmussen JJ, Schäfer RB, Schmidt-Kloiber A, Vannevel R, Várbíró G, Wiberg-Larsen P, Haase P. Invasion impacts and dynamics of a European-wide introduced species. GLOBAL CHANGE BIOLOGY 2022;28:4620-4632. [PMID: 35570183 DOI: 10.1111/gcb.16207] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Accepted: 04/16/2022] [Indexed: 06/15/2023]
12
Butterwort V, Dansby H, Zink FA, Tembrock LR, Gilligan TM, Godoy A, Braswell WE, Kawahara AY. A DNA Extraction Method for Insects From Sticky Traps: Targeting a Low Abundance Pest, Phthorimaea absoluta (Lepidoptera: Gelechiidae), in Mixed Species Communities. JOURNAL OF ECONOMIC ENTOMOLOGY 2022;115:844-851. [PMID: 35391487 DOI: 10.1093/jee/toac046] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Indexed: 06/14/2023]
13
Couton M, Lévêque L, Daguin-Thiébaut C, Comtet T, Viard F. Water eDNA metabarcoding is effective in detecting non-native species in marinas, but detection errors still hinder its use for passive monitoring. BIOFOULING 2022;38:367-383. [PMID: 35575060 DOI: 10.1080/08927014.2022.2075739] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 04/21/2022] [Accepted: 05/05/2022] [Indexed: 06/15/2023]
14
Pinho CJ, Lopes EP, Paupério J, Gomes I, Romeiras MM, Vasconcelos R. Trust your guts? The effect of gut section on diet composition and impact of Mus musculus on islands using metabarcoding. Ecol Evol 2022;12:e8638. [PMID: 35309743 PMCID: PMC8901889 DOI: 10.1002/ece3.8638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Revised: 01/20/2022] [Accepted: 01/27/2022] [Indexed: 11/11/2022]  Open
15
Zhang L, Yang J, Zhang Y, Shi J, Yu H, Zhang X. eDNA biomonitoring revealed the ecological effects of water diversion projects between Yangtze River and Tai Lake. WATER RESEARCH 2022;210:117994. [PMID: 34974345 DOI: 10.1016/j.watres.2021.117994] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 12/17/2021] [Accepted: 12/18/2021] [Indexed: 06/14/2023]
16
ITS DNA Barcoding Reveals That Halophila stipulacea Still Remains the Only Non-Indigenous Seagrass of the Mediterranean Sea. DIVERSITY 2022. [DOI: 10.3390/d14020076] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
17
Saito T. Monitoring and databasing nonnative species to manage establishment debt in aquatic ecosystems. Ecol Res 2022. [DOI: 10.1111/1440-1703.12295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
18
New developments in the field of genomic technologies and their relevance to conservation management. CONSERV GENET 2021. [DOI: 10.1007/s10592-021-01415-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
19
Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates. WATER 2021. [DOI: 10.3390/w13030331] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
20
Duarte S, Vieira PE, Lavrador AS, Costa FO. Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021;751:141729. [PMID: 32889465 DOI: 10.1016/j.scitotenv.2020.141729] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 08/14/2020] [Accepted: 08/14/2020] [Indexed: 06/11/2023]
21
Gleason JE, Elbrecht V, Braukmann TWA, Hanner RH, Cottenie K. Assessment of stream macroinvertebrate communities with eDNA is not congruent with tissue-based metabarcoding. Mol Ecol 2020;30:3239-3251. [PMID: 32799390 DOI: 10.1111/mec.15597] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Accepted: 07/18/2020] [Indexed: 02/06/2023]
22
Xiong W, Huang X, Chen Y, Fu R, Du X, Chen X, Zhan A. Zooplankton biodiversity monitoring in polluted freshwater ecosystems: A technical review. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2019;1:100008. [PMCID: PMC9488063 DOI: 10.1016/j.ese.2019.100008] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Revised: 12/16/2019] [Accepted: 12/20/2019] [Indexed: 05/26/2023]
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA