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Sipiczki M. Identification of antagonistic yeasts as potential biocontrol agents: Diverse criteria and strategies. Int J Food Microbiol 2023; 406:110360. [PMID: 37591131 DOI: 10.1016/j.ijfoodmicro.2023.110360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 07/30/2023] [Accepted: 08/07/2023] [Indexed: 08/19/2023]
Abstract
Plant pathogenic and food spoilage microorganisms cause serious losses in crop production and severe damage during food manufacturing, transportation and storage. Synthetic antimicrobial agents are commonly used to control their propagation and harmful activities. However, the recent trend is shifting from chemicals towards safer and more eco-friendly alternatives. The use of antagonistic microorganisms as biological antimicrobial agents is becoming popular throughout the world to replace chemical agents. High numbers of microorganisms have turned out to exert adverse/inhibitory effects on other microorganisms including pathogens and spoiling strains. However, most of them are only active under laboratory conditions and their activity is sensitive to environmental changes. Only a small number of them can be used to manufacture biological protective products on an industrial scale. Therefore, there is a great need to identify additional antagonists. Yeasts have come to the forefront of attention because antimicrobial antagonism is fairly widespread among them. In the recent years, numerous excellent review articles covered various aspects of the phenomenon of antimicrobial antagonism of yeasts. However, none of them dealt with how antagonistic yeasts can be sought and identified, despite the high number and diverse efficiency of screening and identification procedures. As researchers working in different laboratories use different criteria and different experimental set-ups, a yeast strain found antagonistic in one laboratory may prove to be non-antagonistic in another laboratory. This review aims to provide a comprehensive and partially critical overview of the wide diversity of identification criteria and procedures to help researchers choose appropriate screening and identification strategies.
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Affiliation(s)
- M Sipiczki
- Department of Genetics and Applied Microbiology, University of Debrecen, Debrecen, Hungary.
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Manzano-Gómez LA, Rincón-Rosales R, Flores-Felix JD, Gen-Jimenez A, Ruíz-Valdiviezo VM, Ventura-Canseco LMC, Rincón-Molina FA, Villalobos-Maldonado JJ, Rincón-Molina CI. Cost-Effective Cultivation of Native PGPB Sinorhizobium Strains in a Homemade Bioreactor for Enhanced Plant Growth. Bioengineering (Basel) 2023; 10:960. [PMID: 37627845 PMCID: PMC10451550 DOI: 10.3390/bioengineering10080960] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Revised: 08/09/2023] [Accepted: 08/11/2023] [Indexed: 08/27/2023] Open
Abstract
The implementation of bioreactor systems for the production of bacterial inoculants as biofertilizers has become very important in recent decades. However, it is essential to know the bacterial growth optimal conditions to optimize the production and efficiency of bioinoculants. The aim of this work was to identify the best nutriment and mixing conditions to improve the specific cell growth rates (µ) of two PGPB (plant growth-promoting bacteria) rhizobial strains at the bioreactor level. For this purpose, the strains Sinorhizobium mexicanum ITTG-R7T and Sinorhizobium chiapanecum ITTG-S70T were previously reactivated in a PY-Ca2+ (peptone casein, yeast extract, and calcium) culture medium. Afterward, a master cell bank (MCB) was made in order to maintain the viability and quality of the strains. The kinetic characterization of each bacterial strain was carried out in s shaken flask. Then, the effect of the carbon and nitrogen sources and mechanical agitation was evaluated through a factorial design and response surface methodology (RSM) for cell growth optimization, where µ was considered a response variable. The efficiency of biomass production was determined in a homemade bioreactor, taking into account the optimal conditions obtained during the experiment conducted at the shaken flask stage. In order to evaluate the biological quality of the product obtained in the bioreactor, the bacterial strains were inoculated in common bean (Phaseolus vulgaris var. Jamapa) plants under bioclimatic chamber conditions. The maximum cell growth rate in both PGPB strains was obtained using a Y-Ca2+ (yeast extract and calcium) medium and stirred at 200 and 300 rpm. Under these growth conditions, the Sinorhizobium strains exhibited a high nitrogen-fixing capacity, which had a significant (p < 0.05) impact on the growth of the test plants. The bioreactor system was found to be an efficient alternative for the large-scale production of PGPB rhizobial bacteria, which are intended for use as biofertilizers in agriculture.
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Affiliation(s)
- Luis Alberto Manzano-Gómez
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
- Departamento de Investigación y Desarrollo, 3R Biotec SA de CV, Tuxtla Gutiérrez 29000, Chiapas, Mexico
| | - Reiner Rincón-Rosales
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
| | | | - Adriana Gen-Jimenez
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
| | - Víctor Manuel Ruíz-Valdiviezo
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
| | - Lucia María Cristina Ventura-Canseco
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
| | - Francisco Alexander Rincón-Molina
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
| | - Juan José Villalobos-Maldonado
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
| | - Clara Ivette Rincón-Molina
- Laboratorio de Ecología Genómica, Tecnológico Nacional de México, Instituto Tecnológico de Tuxtla Gutiérrez, Tuxtla Gutiérrez 29050, Chiapas, Mexico; (L.A.M.-G.); (R.R.-R.); (A.G.-J.); (V.M.R.-V.); (L.M.C.V.-C.); (F.A.R.-M.); (J.J.V.-M.)
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Biocontrol Efficacy of the Vishniacozyma Victoriae in Semi-Commercial Assays for the Control of Postharvest Fungal Diseases of Organic Pears. Curr Microbiol 2022; 79:259. [PMID: 35852635 DOI: 10.1007/s00284-022-02934-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Accepted: 06/14/2022] [Indexed: 11/03/2022]
Abstract
Vishniacozyma victoriae NPCC 1263 was selected for this work because of the active antagonistic effect over several fungi in postharvest organic pears. Yeast biomass production was carried out in a 15 L stirred-tank bioreactor with 12 L of working volume at 20 °C and 300 rpm and 0.64 vvm of aeration. The selected production medium was based on cheese whey powder and salts. The present study aims to evaluate the possibility of using an inexpensive growth substrate for production of added value products (yeast biomass), this innovation also requires evaluate biocontrol efficacy of yeast against fungal diseases of pears in semi-commercial assays. The yeast biomass was collected, cold stored for 60 days (Treatment 1) and 15 days (Treatment 2) and sprayed on the pears in semi-commercial level testing assays. After 180 days of postharvest conservation, significant reduction of fungal infection by Penicillium expansum, Botrytis cinerea and Cladosporium sp. was observed. The Treatment 1 reduced total diseases incidence by 71%, instead Treatment 2 reduced it by 92%. The effect of spray application on the yeast viability with different cold storage was tested. These work provides information on the bench-scale bioreactor yeast production using a new low-cost medium, viability and biocontrol efficacy of Vishniacozyma victoriae in controlling common diseases affecting pears in semi-commercial assays.
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Ciofini A, Negrini F, Baroncelli R, Baraldi E. Management of Post-Harvest Anthracnose: Current Approaches and Future Perspectives. PLANTS 2022; 11:plants11141856. [PMID: 35890490 PMCID: PMC9319655 DOI: 10.3390/plants11141856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Revised: 07/08/2022] [Accepted: 07/11/2022] [Indexed: 11/16/2022]
Abstract
Anthracnose is a severe disease caused by Colletotrichum spp. on several crop species. Fungal infections can occur both in the field and at the post-harvest stage causing severe lesions on fruits and economic losses. Physical treatments and synthetic fungicides have traditionally been the preferred means to control anthracnose adverse effects; however, the urgent need to decrease the use of toxic chemicals led to the investigation of innovative and sustainable protection techniques. Evidence for the efficacy of biological agents and vegetal derivates has been reported; however, their introduction into actual crop protection strategies requires the solutions of several critical issues. Biotechnology-based approaches have also been explored, revealing the opportunity to develop innovative and safe methods for anthracnose management through genome editing and RNA interference technologies. Nevertheless, besides the number of advantages related to their use, e.g., the putative absence of adverse effects due to their high specificity, a number of aspects remain to be clarified to enable their introduction into Integrated Pest Management (IPM) protocols against Colletotrichum spp. disease.
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Insight into a Successful Development of Biocontrol Agents: Production, Formulation, Packaging, and Shelf Life as Key Aspects. HORTICULTURAE 2022. [DOI: 10.3390/horticulturae8040305] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
Abstract
Biocontrol agents (BCAs) have been proposed and studied over recent decades as a suitable alternative to diminish or substitute synthetic fungicides used to control pre- and postharvest diseases. However, the development of BCAs has many constraints and obstacles that would have to be overcome before they could be successfully implemented in the market. For the BCA commercial development, the microorganism should be mass-produced on a large-scale, and, independently of the method used for the production, a particular plan regarding the formulation of BCAs by multidisciplinary approaches (liquid or solid) is required to optimize the yield, efficacy, and shelf life of the developed product. Unfortunately, not all BCAs can survive the conditions imposed during the formulation process. Improved stability can be achieved by either using special conditions during growing or by adding protective substances to the formulation medium. Finally, BCAs should be formulated in such a way as to guarantee long-term stability and ease of application of the product. Therefore, an accurate range of the packaging conditions should be considered to extend the shelf life of the formulated product, preferably up to two years. Herein, we discussed the main aspects regarding the production, formulation, packaging, and shelf life of BCAs.
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Cantabella D, Dolcet-Sanjuan R, Solsona C, Vilanova L, Torres R, Teixidó N. Optimization of a food industry-waste-based medium for the production of the plant growth promoting microorganism Pseudomonas oryzihabitans PGP01 based on agro-food industries by-products. BIOTECHNOLOGY REPORTS (AMSTERDAM, NETHERLANDS) 2021; 32:e00675. [PMID: 34603978 PMCID: PMC8473457 DOI: 10.1016/j.btre.2021.e00675] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 08/13/2021] [Accepted: 09/07/2021] [Indexed: 01/03/2023]
Abstract
Several agro-food industry wastes based on potato peels and pulp (FPP), tomato seeds (TS) and cereals (WB) industries were tested for their feasibility in producing P. oryzihabitans PGP01. The production of P. oryzihabitans PGP01 in a medium based on FPP supplemented with 10 g L−1 of tryptone, 10 g L−1 of sugar cane molasses, 5 g L−1 nacl and 2.5 g L−1 of K2HPO4 allowed to reach similar growth than the commercial medium. In 2 L bioreactors, a maximum of 4.4 × 109 CFU mL−1 of P. oryzihabitans PGP01 was obtained after 24 h of growth in the optimized medium, similar than laboratory medium. P. oryzihabitans PGP01 grown on the optimized medium preserved its biological activity, maintaining the same effect on roots of in vitro cultured plantlets than when it was grown in the commercial medium. This study shows how to re-use food-industry wastes for microbial production, reducing the amount of generated wastes.
In this study, three wastes based on potato peels and pulps, tomato seeds and wheat bran were used as basis for the preparation of a cheap medium to produce the bacterium P. oryzihabitans PGP01. In flasks experiments, P. oryzihabitans PGP01 growth at 25 °C in a medium based on frozen potato peels and pulp (FPP) with tryptone as a nitrogen source resulted in the maximum production compared to the commercial TSB medium. In the scale-up to 2 L bioreactors, FPP supplemented with tryptone, molasses, NaCl and K2HPO4 allowed to reach similar biomass production than in the TSB medium. A maximum growth of 4.4 × 109 CFU mL−1 after setting the agitation and the air flux conditions at 400 rpm and 0.75 vvm. Finally, P. oryzihabitans PGP01 growing in this optimized medium conserved its biological activity showing the expected effect in root development previously reported for this microorganism.
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Affiliation(s)
- Daniel Cantabella
- IRTA Plant In Vitro Culture Laboratory, Fruticulture Programme Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain.,IRTA Postharvest Programme; Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
| | - Ramon Dolcet-Sanjuan
- IRTA Plant In Vitro Culture Laboratory, Fruticulture Programme Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
| | - Cristina Solsona
- IRTA Postharvest Programme; Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
| | - Laura Vilanova
- IRTA Postharvest Programme; Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
| | - Rosario Torres
- IRTA Postharvest Programme; Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
| | - Neus Teixidó
- IRTA Postharvest Programme; Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
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Kheireddine A, Palmieri D, Vitullo D, Barberio A, Zouaoui M, De Curtis F, Sadfi-Zouaoui N, Lima G. Characterization of new yeast isolates collected from different fruits in Tunisia and biocontrol activity against Penicillium expansum on apples. JOURNAL OF PLANT PATHOLOGY 2021; 103:1169-1184. [DOI: 10.1007/s42161-021-00921-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 07/22/2021] [Indexed: 01/04/2025]
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Wu P, Wang Z, Zhu Q, Xie Z, Mei Y, Liang Y, Chen Z. Stress preadaptation and overexpression of rpoS and hfq genes increase stress resistance of Pseudomonas fluorescens ATCC13525. Microbiol Res 2021; 250:126804. [PMID: 34144508 DOI: 10.1016/j.micres.2021.126804] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Revised: 03/17/2021] [Accepted: 06/02/2021] [Indexed: 01/06/2023]
Abstract
Pseudomonas fluorescens ATCC13525 is an important growth-promoting rhizobacteria (PGPR) and plant disease biocontrol bacterium. However, due to poor stress resistance, it is prone to be inactivated by preparation, drying and storage. In this study, we investigated the effects of different stress preadaptation methods (2.0∼3.0 wt% NaCl, 0.01∼0.20 wt% H2O2, and 35∼44 °C) and two stress adaptation genes (rpoS, and hfq) on the stress resistance of P. fluorescens ATCC13525 (PF-WT). After stress preadaptation with low stress of 3.0 wt% NaCl, 0.05 wt% H2O2, and 41 °C for 30 min, the tolerance of PF-WT toward high lethal stress environments (20.0 wt% NaCl, 1.00 wt% H2O2, and 47 °C) were significantly improved. Moreover, knockout of rpoS and hfq genes resulted in slower culture growth than PF-WT under the sublethal stress culture conditions (5.0 wt% NaCl, 0.08 wt% H2O2, and 35 °C), whereas rpoS and hfq overexpressed strains (PF-pBBR2-rpoS and PF-pBBR2-hfq) obviously grew better than the control strain PF-pBBR2. Further, we prepared biocontrol agents (BACs) of different strains after different stress preadaptation treatments. Compared to PF-WT without stress preadaptation, preadaptation by 0.05 wt% H2O2 for 30 min resulted in 5.65 times higher survival rate, while treatment with 3.0 wt% NaCl for 30 min of PF-pBBR2-rpoS led to 5.60 times higher survival rate. This finding provides the simple and effective protection methods for P. fluorescens ATCC13525 BACs preparation by stress preadaptation and overexpression of stress adaptation genes.
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Affiliation(s)
- Pengyu Wu
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, PR China
| | - Zhaopu Wang
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, PR China
| | - Qiuyan Zhu
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, PR China
| | - Zhixiong Xie
- College of Life Science, Wuhan University, Wuhan, 430072, PR China.
| | - Yuxia Mei
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, PR China
| | - Yunxiang Liang
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, PR China
| | - Zhenmin Chen
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, PR China.
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Guerrero-Barajas C, Constantino-Salinas EA, Amora-Lazcano E, Tlalapango-Ángeles D, Mendoza-Figueroa JS, Cruz-Maya JA, Jan-Roblero J. Bacillus mycoides A1 and Bacillus tequilensis A3 inhibit the growth of a member of the phytopathogen Colletotrichum gloeosporioides species complex in avocado. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2020; 100:4049-4056. [PMID: 32338377 DOI: 10.1002/jsfa.10450] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Revised: 04/19/2020] [Accepted: 04/27/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Avocado is affected by Colletotrichum gloeosporioides causing anthracnose. Antagonistic microorganisms against C. gloeosporioides represent an alternative for biological control. Accordingly, in the present study, we focused on the isolation and characterization of potential antagonist bacteria against a member of the C. gloeosporioides species complex with respect to their possible future application. RESULTS Samples of avocado rhizospheric soil were aquired from an orchard located in Ocuituco, Morelos, Mexico, aiming to obtain bacterial isolates with potential antifungal activity. From the soil samples, 136 bacteria were isolated and they were then challenged against a member of the C. gloeosporioides species complex; only three bacterial isolates A1, A2 and A3 significantly diminished mycelial fungal growth by 75%, 70% and 60%, respectively. Two of these isolates were identified by 16S rRNA as Bacillus mycoides (A1 and A2) and the third was identified as Bacillus tequilensis (A3). Bacillus mycoides bacterial cell-free supernatant reduced the mycelial growth of a member of the C. gloeosporioides species complex isolated from avocado by 65%, whereas Bacillus tequilensis A3 supernatant did so by 25% after 3 days post inoculation. Bacillus tequilensis mycoides A1 was a producer of proteases, indolacetic acid and siderophores. Preventive treatment using a cell-free supernatant of B. mycoides A1 diminished the severity of anthracnose disease (41.9%) on avocado fruit. CONCLUSION These results reveal the possibility of using B. mycoides A1 as a potential biological control agent. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Claudia Guerrero-Barajas
- Laboratorio de Biotecnología Ambiental, Departamento de Bioprocesos, Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Erick A Constantino-Salinas
- Laboratorio de Microbiología del Suelo, Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Enriqueta Amora-Lazcano
- Laboratorio de Microbiología del Suelo, Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Daniel Tlalapango-Ángeles
- Laboratorio de Biotecnología Ambiental, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, Mexico
| | - José S Mendoza-Figueroa
- Laboratorio de Biotecnología Ambiental, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, Mexico
- Department of Physics-Chemistry-Biology, Linköping University, Linköping, Sweden
| | - Juan A Cruz-Maya
- Unidad Profesional Interdisciplinaria en Ingeniería y Tecnologías Avanzadas, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Janet Jan-Roblero
- Laboratorio de Biotecnología Ambiental, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Mexico City, Mexico
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Bogacz-Radomska L, Harasym J. β-Carotene—properties and production methods. FOOD QUALITY AND SAFETY 2018. [DOI: 10.1093/fqsafe/fyy004] [Citation(s) in RCA: 78] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Ludmila Bogacz-Radomska
- Department of Biotechnology and Food Analysis, Faculty of Engineering and Economics, Wroclaw University of Economics, Wroclaw, Poland
| | - Joanna Harasym
- Department of Biotechnology and Food Analysis, Faculty of Engineering and Economics, Wroclaw University of Economics, Wroclaw, Poland
- Department of Agriculture and Forestry Engineering, College of Agricultural and Forestry Engineering, University of Valladolid, Valladolid, Spain
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Dukare AS, Paul S, Nambi VE, Gupta RK, Singh R, Sharma K, Vishwakarma RK. Exploitation of microbial antagonists for the control of postharvest diseases of fruits: a review. Crit Rev Food Sci Nutr 2018; 59:1498-1513. [DOI: 10.1080/10408398.2017.1417235] [Citation(s) in RCA: 153] [Impact Index Per Article: 21.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Ajinath Shridhar Dukare
- ICAR - Central Institute of Post-Harvest Engineering & Technology, Ludhiana/Abohar, Punjab, India
| | - Sangeeta Paul
- ICAR - Indian Agricultural Research Institute, New Delhi, India
| | - V. Eyarkai Nambi
- ICAR - Central Institute of Post-Harvest Engineering & Technology, Ludhiana/Abohar, Punjab, India
| | - Ram Kishore Gupta
- ICAR - Central Institute of Post-Harvest Engineering & Technology, Ludhiana/Abohar, Punjab, India
| | - Rajbir Singh
- ICAR - Agricultural Technology Application Research Institutes, Ludhiana, Punjab, India
| | - Kalyani Sharma
- ICAR - Central Institute of Post-Harvest Engineering & Technology, Ludhiana/Abohar, Punjab, India
| | - Rajesh Kumar Vishwakarma
- ICAR - Central Institute of Post-Harvest Engineering & Technology, Ludhiana/Abohar, Punjab, India
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Stevenson A, Hamill PG, Medina Á, Kminek G, Rummel JD, Dijksterhuis J, Timson DJ, Magan N, Leong SLL, Hallsworth JE. Glycerol enhances fungal germination at the water-activity limit for life. Environ Microbiol 2017; 19:947-967. [PMID: 27631633 PMCID: PMC5363249 DOI: 10.1111/1462-2920.13530] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2016] [Revised: 09/09/2016] [Accepted: 09/12/2016] [Indexed: 11/30/2022]
Abstract
For the most-extreme fungal xerophiles, metabolic activity and cell division typically halts between 0.700 and 0.640 water activity (approximately 70.0-64.0% relative humidity). Here, we investigate whether glycerol can enhance xerophile germination under acute water-activity regimes, using an experimental system which represents the biophysical limit of Earth's biosphere. Spores from a variety of species, including Aspergillus penicillioides, Eurotium halophilicum, Xerochrysium xerophilum (formerly Chrysosporium xerophilum) and Xeromyces bisporus, were produced by cultures growing on media supplemented with glycerol (and contained up to 189 mg glycerol g dry spores-1 ). The ability of these spores to germinate, and the kinetics of germination, were then determined on a range of media designed to recreate stresses experienced in microbial habitats or anthropogenic systems (with water-activities from 0.765 to 0.575). For A. penicillioides, Eurotium amstelodami, E. halophilicum, X. xerophilum and X. bisporus, germination occurred at lower water-activities than previously recorded (0.640, 0.685, 0.651, 0.664 and 0.637 respectively). In addition, the kinetics of germination at low water-activities were substantially faster than those reported previously. Extrapolations indicated theoretical water-activity minima below these values; as low as 0.570 for A. penicillioides and X. bisporus. Glycerol is present at high concentrations (up to molar levels) in many types of microbial habitat. We discuss the likely role of glycerol in expanding the water-activity limit for microbial cell function in relation to temporal constraints and location of the microbial cell or habitat. The findings reported here have also critical implications for understanding the extremes of Earth's biosphere; for understanding the potency of disease-causing microorganisms; and in biotechnologies that operate at the limits of microbial function.
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Affiliation(s)
- Andrew Stevenson
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
| | - Philip G Hamill
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
| | - Ángel Medina
- Applied Mycology Group, Cranfield Soil and AgriFood Institute, Cranfield University, Cranfield, Bedford, MK43 OAL, UK
| | - Gerhard Kminek
- Independent Safety Office, European Space Agency, 2200 AG Noordwijk, The Netherlands
| | - John D Rummel
- SETI Institute, Mountain View, California, 94043, USA
| | - Jan Dijksterhuis
- CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, Utrecht, CT, 3584, The Netherlands
| | - David J Timson
- School of Pharmacy and Biomolecular Sciences, University of Brighton, Huxley Building, Lewes Road, Brighton, BN2 4GJ, UK
| | - Naresh Magan
- Applied Mycology Group, Cranfield Soil and AgriFood Institute, Cranfield University, Cranfield, Bedford, MK43 OAL, UK
| | - Su-Lin L Leong
- Department of Microbiology, Swedish University of Agricultural Sciences, Box 7025, Uppsala, 75007, Sweden
| | - John E Hallsworth
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
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Vassilev N, Malusa E, Requena AR, Martos V, López A, Maksimovic I, Vassileva M. Potential application of glycerol in the production of plant beneficial microorganisms. J Ind Microbiol Biotechnol 2016; 44:735-743. [PMID: 27514665 DOI: 10.1007/s10295-016-1810-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2016] [Accepted: 07/30/2016] [Indexed: 12/24/2022]
Abstract
This review highlights the importance of research for development of biofertilizer and biocontrol products based on the use of glycerol for further process scale-up to industrial microbiology. Glycerol can be used successfully in all stages of production of plant beneficial microorganisms. It serves as an excellent substrate in both submerged and solid-state fermentation processes with free and immobilized microbial cells. Glycerol is also one of the most attractive formulation agents that ensures high cell density and viability including in harsh environmental conditions. Future research is discussed to make this inexpensive material a base for industrial production of plant beneficial microorganisms.
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Affiliation(s)
- Nikolay Vassilev
- Institute of Biotechnology, University of Granada, Granada, Spain. .,Department of Chemical Engineering, University of Granada, c/Fuentenueva s/n, 18071, Granada, Spain.
| | - Eligio Malusa
- Unit of Turin, CRA-Centre for Plant-Soil Systems, Turin, Italy
| | | | - Vanessa Martos
- Institute of Biotechnology, University of Granada, Granada, Spain
| | - Ana López
- Institute of Biotechnology, University of Granada, Granada, Spain
| | | | - Maria Vassileva
- Institute of Biotechnology, University of Granada, Granada, Spain
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Bautista Silva JP, Barbosa Barbosa HDJ, Uribe Vélez D. Prototipo de formulación a base de Rhodotorula mucilaginosa para el control de Botrytis cinerea en Rosas. REVISTA COLOMBIANA DE BIOTECNOLOGÍA 2016. [DOI: 10.15446/rev.colomb.biote.v18n2.55826] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
Los sistemas productivos de Rosas de corte para exportación poseen retos importantes debido a la presencia de diversos agentes fitopatógenos, siendo Botrytis cinerea uno de los más relevantes debido a su persistencia y número de hospederos alternativos. Los mercados internacionales son muy exigentes en el manejo ambientalmente sostenible de los cultivos, por lo que se ha hecho presión para la implementación de estrategias de control biológico de enfermedades. La levadura filosferica Rhodotorula mucilaginosa (Lv20) con potencial biocontrolador contra B. cinérea, fue empleada en este estudio con el objeto de generar un prototipo de formulación en base sólida con el fin de lograr una estabilidad de la actividad y viabilidad celular a través del tiempo. El empleo de mezclas de polímeros sintéticos y de origen natural permitió mantener la viabilidad de esta cepa durante 90 días a unos niveles de 1,90x109 células.mL-1 a una temperatura de 25°C en una formulación líquida. Así mismo, el prototipo de formulación, empleando manitol como agente nucleador en una formulación sólida de tipo granulada, logró una viabilidad celular de 1.2x108 células.gr-1 a los 90 días de almacenamiento a 4°C, logrando mantener una actividad biocontroladora igual a la cepa fresca sin formular o recién formulada. Estos resultados obtenidos permiten sugerir que los prototipos de formulación empleando como principio activo la levadura R. mucilaginosa, son una alternativa promisoria para el control de B. cinerea en la post cosecha de rosas variedad véndela.Palabras clave: levaduras, moho gris, formulación sólida, biopolimeros, control biológico, postcosecha.
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Cray JA, Connor MC, Stevenson A, Houghton JDR, Rangel DEN, Cooke LR, Hallsworth JE. Biocontrol agents promote growth of potato pathogens, depending on environmental conditions. Microb Biotechnol 2016; 9:330-54. [PMID: 26880001 PMCID: PMC4835571 DOI: 10.1111/1751-7915.12349] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2015] [Revised: 12/29/2015] [Accepted: 12/31/2015] [Indexed: 11/30/2022] Open
Abstract
There is a pressing need to understand and optimize biological control so as to avoid over‐reliance on the synthetic chemical pesticides that can damage environmental and human health. This study focused on interactions between a novel biocontrol‐strain, Bacillus sp. JC12GB43, and potato‐pathogenic Phytophthora and Fusarium species. In assays carried out in vitro and on the potato tuber, the bacterium was capable of near‐complete inhibition of pathogens. This Bacillus was sufficiently xerotolerant (water activity limit for growth = 0.928) to out‐perform Phytophthora infestans (~0.960) and challenge Fusarium coeruleum (~0.847) and Fusarium sambucinum (~0.860) towards the lower limits of their growth windows. Under some conditions, however, strain JC12GB43 stimulated proliferation of the pathogens: for instance, Fusarium coeruleum growth‐rate was increased under chaotropic conditions in vitro (132 mM urea) by >100% and on tubers (2‐M glycerol) by up to 570%. Culture‐based assays involving macromolecule‐stabilizing (kosmotropic) compatible solutes provided proof‐of‐principle that the Bacillus may provide kosmotropic metabolites to the plant pathogen under conditions that destabilize macromolecular systems of the fungal cell. Whilst unprecedented, this finding is consistent with earlier reports that fungi can utilize metabolites derived from bacterial cells. Unless the antimicrobial activities of candidate biocontrol strains are assayed over a full range of field‐relevant parameters, biocontrol agents may promote plant pathogen infections and thereby reduce crop yields. These findings indicate that biocontrol activity, therefore, ought to be regarded as a mode‐of‐behaviour (dependent on prevailing conditions) rather than an inherent property of a bacterial strain.
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Affiliation(s)
- Jonathan A Cray
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
| | - Mairéad C Connor
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
| | - Andrew Stevenson
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
| | - Jonathan D R Houghton
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
| | - Drauzio E N Rangel
- Instituto de Patologia Tropical e Saúde Pública, Universidade Federal de Goiás, Goiânia, GO, 74605-050, Brazil
| | - Louise R Cooke
- Agri-Food & Biosciences Institute (AFBI), Newforge Lane, Belfast, BT9 5PX, Northern Ireland
| | - John E Hallsworth
- Institute for Global Food Security, School of Biological Sciences, MBC, Queen's University Belfast, Belfast, BT9 7BL, Northern Ireland
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Sargeant LA, Mardell M, Saad‐Allah KM, Hussein AH, Whiffin F, Santomauro F, Chuck CJ. Production of lipid from depolymerised lignocellulose using the biocontrol yeast,
Rhodotorula minuta
: The fatty acid profile remains stable irrespective of environmental conditions. EUR J LIPID SCI TECH 2015. [DOI: 10.1002/ejlt.201500143] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Affiliation(s)
- Lisa A. Sargeant
- Doctoral Training Centre in Sustainable Chemical Technologies, Department of Chemical EngineeringUniversity of BathBathUnited Kingdom
| | - Matthew Mardell
- Department of Chemical EngineeringUniversity of BathBathUnited Kingdom
| | | | - Ali H. Hussein
- Department of Biology and BiochemistryUniversity of BathBathUnited Kingdom
| | - Fraeya Whiffin
- Doctoral Training Centre in Sustainable Chemical Technologies, Department of Chemical EngineeringUniversity of BathBathUnited Kingdom
| | - Fabio Santomauro
- Department of Chemical EngineeringUniversity of BathBathUnited Kingdom
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Desarrollo histórico y los retos tecnológicos y legales para comercializar Fungifree AB®, el primer biofungicida 100% mexicano. TIP REVISTA ESPECIALIZADA EN CIENCIAS QUÍMICO-BIOLÓGICAS 2015. [DOI: 10.1016/j.recqb.2015.05.005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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Sui Y, Wisniewski M, Droby S, Liu J. Responses of yeast biocontrol agents to environmental stress. Appl Environ Microbiol 2015; 81:2968-75. [PMID: 25710368 PMCID: PMC4393439 DOI: 10.1128/aem.04203-14] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Biological control of postharvest diseases, utilizing wild species and strains of antagonistic yeast species, is a research topic that has received considerable attention in the literature over the past 30 years. In principle, it represents a promising alternative to chemical fungicides for the management of postharvest decay of fruits, vegetables, and grains. A yeast-based biocontrol system is composed of a tritrophic interaction between a host (commodity), a pathogen, and a yeast species, all of which are affected by environmental factors such as temperature, pH, and UV light as well as osmotic and oxidative stresses. Additionally, during the production process, biocontrol agents encounter various severe abiotic stresses that also impact their viability. Therefore, understanding the ecological fitness of the potential yeast biocontrol agents and developing strategies to enhance their stress tolerance are essential to their efficacy and commercial application. The current review provides an overview of the responses of antagonistic yeast species to various environmental stresses, the methods that can be used to improve stress tolerance and efficacy, and the related mechanisms associated with improved stress tolerance.
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Affiliation(s)
- Yuan Sui
- School of Biotechnology and Food Engineering, Hefei University of Technology, Hefei, China
| | - Michael Wisniewski
- U.S. Department of Agriculture-Agricultural Research Service (USDA-ARS), Kearneysville, West Virginia, USA
| | - Samir Droby
- Agricultural Research Organization (ARO), The Volcani Center, Bet Dagan, Israel
| | - Jia Liu
- School of Biotechnology and Food Engineering, Hefei University of Technology, Hefei, China
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Li C, Zhang H, Yang Q, Komla MG, Zhang X, Zhu S. Ascorbic acid enhances oxidative stress tolerance and biological control efficacy of Pichia caribbica against postharvest blue mold decay of apples. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:7612-7621. [PMID: 25029482 DOI: 10.1021/jf501984n] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The effect of ascorbic acid (VC) on improving oxidative stress tolerance of Pichia caribbica and biocontrol efficacy against blue mold caused by Penicillium expansum on apples was investigated. P. caribbica showed susceptibility to the oxidative stress in vitro test, and 250 μg/mL VC treatment improved its oxidative stress tolerance. The higher viability exhibited by VC-treated yeast was associated with a lower intracellular ROS level. The activities of antioxidant enzymes of P. caribbica were improved by VC treatment, including catalase (CAT), superoxide dismutase (SOD), and glutathione peroxidase (GPX). Additionally, VC-treated yeast exhibited greater biocontrol activity against P. expansum and faster growth when stored at 25 and 4 °C, respectively, compared to the performance of the non-VC-treated yeast. In response to the VC treatment under oxidative stress, several differentially expressed proteins were identified in P. caribbica, and most of the poteins were confirmed to be related to basic metabolism. Therefore, the application of ascorbic acid is a useful approach to improve oxidative stress tolerance of P. caribbica and its biocontrol efficacy on apples.
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Affiliation(s)
- Chaolan Li
- School of Food and Biological Engineering, Jiangsu University , Zhenjiang 212013, Jiangsu, People's Republic of China
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21
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Relationship between ethanol and oxidative stress in laboratory and brewing yeast strains. J Biosci Bioeng 2013; 116:697-705. [DOI: 10.1016/j.jbiosc.2013.05.037] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2013] [Revised: 05/13/2013] [Accepted: 05/31/2013] [Indexed: 11/22/2022]
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Liu J, Sui Y, Wisniewski M, Droby S, Liu Y. Review: Utilization of antagonistic yeasts to manage postharvest fungal diseases of fruit. Int J Food Microbiol 2013; 167:153-60. [DOI: 10.1016/j.ijfoodmicro.2013.09.004] [Citation(s) in RCA: 229] [Impact Index Per Article: 19.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2013] [Revised: 09/02/2013] [Accepted: 09/10/2013] [Indexed: 01/30/2023]
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Scale-up from shake flasks to pilot-scale production of the plant growth-promoting bacterium Azospirillum brasilense for preparing a liquid inoculant formulation. Appl Microbiol Biotechnol 2013; 97:9665-74. [DOI: 10.1007/s00253-013-5199-9] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2013] [Revised: 07/16/2013] [Accepted: 08/13/2013] [Indexed: 11/25/2022]
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Najim N, Aryana KJ. A mild pulsed electric field condition that improves acid tolerance, growth, and protease activity of Lactobacillus acidophilus LA-K and Lactobacillus delbrueckii subspecies bulgaricus LB-12. J Dairy Sci 2013; 96:3424-34. [PMID: 23587394 DOI: 10.3168/jds.2012-5842] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2012] [Accepted: 01/19/2013] [Indexed: 11/19/2022]
Abstract
Pulsed electric field (PEF) processing involves the application of pulses of voltage for less than 1 s to fluid products placed between 2 electrodes. The effect of mild PEF on beneficial characteristics of probiotic bacteria Lactobacillus acidophilus and Lactobacillus delbrueckii ssp. bulgaricus is not clearly understood. The objective of this study was to determine the influence of mild PEF conditions on acid tolerance, growth, and protease activity of Lb. acidophilus LA-K and Lactobacillus delbrueckii ssp. bulgaricus LB-12. A pilot plant PEF system (OSU-4M; The Ohio State University, Columbus) was used. The PEF treatments were positive square unipolar pulse width of 3 µs, pulse period of 0.5s, electric field strength of 1 kV/cm, delay time of 20 µs, flow rate of 60 mL/min, and 40.5°C PEF treatment temperature. Both Lb. acidophilus LA-K and Lb. bulgaricus LB-12 subjected to mild PEF conditions were acid tolerant until the end of the 120 min of incubation, unlike the Lb. bulgaricus control, which was not acid tolerant after 30 min. The mild PEF-treated Lb. acidophilus LA-K and Lb. bulgaricus LB-12 reached the logarithmic phase of growth an hour earlier than the control. Mild PEF conditions studied significantly improved acid tolerance, exponential growth, and protease activity of both Lb. acidophilus LA-K and Lb. bulgaricus LB-12 compared with the control. The mild PEF conditions studied can be recommended for pretreating cultures to enhance these desirable attributes.
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Affiliation(s)
- N Najim
- School of Animal Sciences, Louisiana State University Agricultural Center, Baton Rouge 70803, USA
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Jensen B, Knudsen IMB, Andersen B, Nielsen KF, Thrane U, Jensen DF, Larsen J. Characterization of microbial communities and fungal metabolites on field grown strawberries from organic and conventional production. Int J Food Microbiol 2012; 160:313-22. [PMID: 23290240 DOI: 10.1016/j.ijfoodmicro.2012.11.005] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Revised: 10/22/2012] [Accepted: 11/05/2012] [Indexed: 11/30/2022]
Abstract
The background levels of culturable indigenous microbial communities (microbiotas) on strawberries were examined in a field survey with four conventional and four organic growers with different production practise and geographic distribution. The microbiota on apparently healthy strawberries was complex including potential plant pathogens, opportunistic human pathogens, plant disease biocontrol agents and mycotoxin producers. The latter group was dominated by Penicillium spp. and Aspergillus niger was also isolated. As expected, bacteria were the most abundant and diverse group of the strawberry microbiota followed by yeasts and filamentous fungi. No obvious correlation between grower practice and the strawberry microbiota was observed. Differences between microbiotas on strawberries from conventional systems with up to 10 fungicide spray treatments and organic production systems were insignificant. Mycotoxins were not detected in mature strawberries from any of the eight different growers neither in additional samples of low quality berries. However, isolates of Penicillium expansum and A. niger produced high amounts of mycotoxins when incubated on strawberries at 25°C. Penicillium polonicum produced cyclopenol, cyclopenin, and viridicatin on the artificially infected berries, while Alternaria arborescens produced tenuazonic acid, Alternaria tenuissima produced altertoxin I and altenuene, and Trichoderma spp. produced several peptaibols. In conclusion, native strawberry microbiotas are highly diverse both in terms of taxonomic groups and functional traits that are important in relation to plant and human health.
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Affiliation(s)
- Birgit Jensen
- Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Denmark.
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Nopcharoenkul W, Pinphanichakarn P, Pinyakong O. The development of a liquid formulation of Pseudoxanthomonas sp. RN402 and its application in the treatment of pyrene-contaminated soil. J Appl Microbiol 2011; 111:36-47. [PMID: 21518158 DOI: 10.1111/j.1365-2672.2011.05037.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
AIM To develop a liquid formulation of Pseudoxanthomonas sp. RN402 for prolonged storage and maintaining high survival rates and pyrene biodegradability. METHODS AND RESULTS Liquid formulations of RN402, designated as L-RN402, were prepared by suspending bacterial cells (10⁹ CFU ml⁻¹) in various buffers. Analysis found that phosphate buffer containing glycerol maintained high survival rate (94%) as well as pyrene biodegradability of bacteria after a 30-day storage. This L-RN402 could be stored at 30°C for at least 6 months. Bioaugmentation treatment with stored L-RN402 resulted in the complete degradation of pyrene (300 mg kg⁻¹) in soil microcosms within 4 weeks. RN402 could be detected by denaturing gradient gel electrophoresis throughout the period; moreover, real-time PCR indicated the presence of high number of nidA-containing bacteria. CONCLUSIONS A liquid formulation of RN402, an effective pyrene degrader, was developed by suspending RN402 in phosphate buffer containing 1% glycerol. This formulation could be stored at 30°C for at least 6 months and maintain high efficacy in the treatment of pyrene-contaminated soil. SIGNIFICANCE AND IMPACT OF THE STUDY This work is the first description of a liquid formulation of pyrene-degrading bacteria for prolonged storage that retains biological activity for the treatment of environmental pollutants.
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Affiliation(s)
- W Nopcharoenkul
- Inter-department of Environmental Science, Graduate School, Chulalongkorn University, Bangkok, Thailand
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Glycine betaine improves oxidative stress tolerance and biocontrol efficacy of the antagonistic yeast Cystofilobasidium infirmominiatum. Int J Food Microbiol 2011; 146:76-83. [DOI: 10.1016/j.ijfoodmicro.2011.02.007] [Citation(s) in RCA: 79] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2010] [Revised: 01/25/2011] [Accepted: 02/07/2011] [Indexed: 11/20/2022]
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da Silva TL, Feijão D, Roseiro JC, Reis A. Monitoring Rhodotorula glutinis CCMI 145 physiological response and oil production growing on xylose and glucose using multi-parameter flow cytometry. BIORESOURCE TECHNOLOGY 2011; 102:2998-3006. [PMID: 21030251 DOI: 10.1016/j.biortech.2010.10.008] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2010] [Revised: 09/30/2010] [Accepted: 10/01/2010] [Indexed: 05/30/2023]
Abstract
Flow cytometry was used to monitor the lipid content, viability and intrinsic light scatter properties of Rhodotorula glutinis CCMI 145 cells growing on batch cultures using xylose and glucose as carbon sources. The highest lipid content was observed for cells grown on glucose, at the end of the exponential phase (17.8% w/w). The proportion of cells stained with PI attaining 77% at the end of the glucose growth. Cells growing on xylose produced a maximum lipid content of 10.6% (w/w), at the stationary phase. An increase in the proportion of cells stained with PI was observed, reaching 29% at the end of xylose growth. Changes in the side and forward light scatter detected during the yeast batch cultures supported that R. glutinis cells grown on glucose experienced harsher conditions, resulting in a high level of cytoplasmic membrane damage, which did not occur when R. glutinis cells grew on xylose.
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Affiliation(s)
- Teresa Lopes da Silva
- Laboratório Nacional de Energia e Geologia (LNEG), Unidade de Bioenergia, Estrada do Paço do Lumiar, Lisboa, Portugal.
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Srivastava R, Aragno M, Sharma AK. Cow dung extract: a medium for the growth of pseudomonads enhancing their efficiency as biofertilizer and biocontrol agent in rice. Indian J Microbiol 2010; 50:349-54. [PMID: 23100852 PMCID: PMC3450066 DOI: 10.1007/s12088-010-0032-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2008] [Accepted: 02/04/2009] [Indexed: 11/27/2022] Open
Abstract
Some pseudomands are being utilized as biofertilizers and biopesticides because of their role in plant growth promotion and plant protection against root parasites, respectively. Two strains of Pseudomonas, P. jessenii LHRE62 and P. synxantha HHRE81, recovered from wheat rhizosphere, have shown their potential in field bioinoculation tests under rice-wheat and pulse-wheat rotation systems. Normally, pseudomonads are cultivated on synthetic media-like King's B and used for inoculation on seeds/soil drench with talcum or charcoal as carrier material. Cow dung is being used for different purposes from the ancient time and has a significant role in crop growth because of the content in humic compounds and fertilizing bioelements available in it. Here, cow dung extract was tested as a growth medium for strains LHRE62 and HHRE81, in comparison with growth in King's B medium. The log phase was delayed by 2 h as compared to growth in King's B medium. The bacterial growth yield, lower in plain cow dung extract as compared to King's B medium, was improved upon addition of different carbon substrates. Growth of rice var. Pant Dhan 4 in pot cultures was increased using liquid formulation of cow dung extract and bacteria as foliar spray, compared to their respective controls. Biocontrol efficacy of the bioagents was assessed by challenging rice crop with Rhizoctonia solani, a sheath blight pathogen. The growth promotion and biocontrol efficiencies were more pronounced in the case of mixed inocula of strains LHRE62 and HHRE81.
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Affiliation(s)
- Rashmi Srivastava
- Department of Biological Sciences, CBSH, G.B. Pant University of Agriculture and Technology, Pantnagar, 263 145 Uttarakhand India
| | - Michel Aragno
- Laboratory of Microbiology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - A. K. Sharma
- Department of Biological Sciences, CBSH, G.B. Pant University of Agriculture and Technology, Pantnagar, 263 145 Uttarakhand India
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Spadaro D, Ciavorella A, Dianpeng Z, Garibaldi A, Gullino ML. Effect of culture media and pH on the biomass production and biocontrol efficacy of aMetschnikowia pulcherrimastrain to be used as a biofungicide for postharvest disease control. Can J Microbiol 2010; 56:128-37. [DOI: 10.1139/w09-117] [Citation(s) in RCA: 62] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Few strains of Metschnikowia pulcherrima (Pitt) M.W. Miller are under development for control of postharvest pathogens on fruit. A substrate was developed to optimize the biomass production of M. pulcherrima strain BIO126. Different complex nutrient sources, with or without pH control, were tested. Growth in yeast extract provided at concentrations ≥30 g·L–1yielded the highest biomass. The addition of two carbon sources, d-mannitol and l-sorbose, at 5 g·L–1each, significantly improved yeast growth. The greatest amount of yeast growth occurred when pH values of the medium ranged from 5.0 to 7.5. A combination of yeast extract, d-mannitol, and l-sorbose (YEMS), probably with diauxic utilization, showed a synergistic effect, widening the exponential phase (maximum specific growth rate of 0.45 h–1) and increasing the final cell number (1.5 × 109cells·mL–1) and dry biomass (6.0 g·L–1) in well-controlled batch fermentation. In efficacy trials on ‘Golden Delicious’ apples, M. pulcherrima grown in YEMS effectively reduced incidence and severity of Botrytis cinerea (51.1% and 70.8%, respectively) and Penicillium expansum (41.7% and 14.0%, respectively). Also on ‘Gala’ apples, the best reduction of grey and blue mould incidence was obtained with cells grown in YEMS (58.1% and 50.5%, respectively).
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Affiliation(s)
- D. Spadaro
- Department of Exploitation and Protection of Agricultural and Forestry Resources (DiVaPRA) – Plant Pathology, University of Turin, 10095 Grugliasco, Italy
- Centre of Competence for Innovation in the Agro-Environmental Sector (AGROINNOVA), University of Turin, 10095 Grugliasco, Italy
| | - A. Ciavorella
- Department of Exploitation and Protection of Agricultural and Forestry Resources (DiVaPRA) – Plant Pathology, University of Turin, 10095 Grugliasco, Italy
- Centre of Competence for Innovation in the Agro-Environmental Sector (AGROINNOVA), University of Turin, 10095 Grugliasco, Italy
| | - Z. Dianpeng
- Department of Exploitation and Protection of Agricultural and Forestry Resources (DiVaPRA) – Plant Pathology, University of Turin, 10095 Grugliasco, Italy
- Centre of Competence for Innovation in the Agro-Environmental Sector (AGROINNOVA), University of Turin, 10095 Grugliasco, Italy
| | - A. Garibaldi
- Department of Exploitation and Protection of Agricultural and Forestry Resources (DiVaPRA) – Plant Pathology, University of Turin, 10095 Grugliasco, Italy
- Centre of Competence for Innovation in the Agro-Environmental Sector (AGROINNOVA), University of Turin, 10095 Grugliasco, Italy
| | - M. L. Gullino
- Department of Exploitation and Protection of Agricultural and Forestry Resources (DiVaPRA) – Plant Pathology, University of Turin, 10095 Grugliasco, Italy
- Centre of Competence for Innovation in the Agro-Environmental Sector (AGROINNOVA), University of Turin, 10095 Grugliasco, Italy
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Production of the biocontrol agent Pantoea agglomerans PBC-1 in a stirred tank reactor by batch and fed-batch cultures. World J Microbiol Biotechnol 2009. [DOI: 10.1007/s11274-009-0229-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Current awareness on yeast. Yeast 2006. [DOI: 10.1002/yea.1289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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