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Hsu SK, Lai WY, Novak J, Lehner F, Jakšić AM, Versace E, Schlötterer C. Reproductive isolation arises during laboratory adaptation to a novel hot environment. Genome Biol 2024; 25:141. [PMID: 38807159 PMCID: PMC11134630 DOI: 10.1186/s13059-024-03285-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Accepted: 05/17/2024] [Indexed: 05/30/2024] Open
Abstract
BACKGROUND Reproductive isolation can result from adaptive processes (e.g., ecological speciation and mutation-order speciation) or stochastic processes such as "system drift" model. Ecological speciation predicts barriers to gene flow between populations from different environments, but not among replicate populations from the same environment. In contrast, reproductive isolation among populations independently adapted to the same/similar environment can arise from both mutation-order speciation or system drift. RESULTS In experimentally evolved populations adapting to a hot environment for over 100 generations, we find evidence for pre- and postmating reproductive isolation. On one hand, an altered lipid metabolism and cuticular hydrocarbon composition pointed to possible premating barriers between the ancestral and replicate evolved populations. On the other hand, the pronounced gene expression differences in male reproductive genes may underlie the postmating isolation among replicate evolved populations adapting to the same environment with the same standing genetic variation. CONCLUSION Our study confirms that replicated evolution experiments provide valuable insights into the mechanisms of speciation. The rapid emergence of the premating reproductive isolation during temperature adaptation showcases incipient ecological speciation. The potential evidence of postmating reproductive isolation among replicates gave rise to two hypotheses: (1) mutation-order speciation through a common selection on early fecundity leading to an inherent inter-locus sexual conflict; (2) system drift with genetic drift along the neutral ridges.
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Affiliation(s)
- Sheng-Kai Hsu
- Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
- Vienna Graduate School of Population Genetics, Vetmeduni Vienna, Vienna, Austria
| | - Wei-Yun Lai
- Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
- Vienna Graduate School of Population Genetics, Vetmeduni Vienna, Vienna, Austria
| | - Johannes Novak
- Institute of Animal Nutrition and Functional Plant Compounds, Vetmeduni Vienna, Vienna, Austria
| | - Felix Lehner
- Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
| | - Ana Marija Jakšić
- Institut für Populationsgenetik, Vetmeduni Vienna, Vienna, Austria
- Vienna Graduate School of Population Genetics, Vetmeduni Vienna, Vienna, Austria
- Present Address: École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | - Elisabetta Versace
- Department of Biological and Experimental Psychology, Queen Mary University of London, London, UK
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2
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Goyal E, Singh AK, Mahajan MM, Kanika K. Comparative transcriptome profiling of contrasting finger millet (Eleusine coracana (L.) Gaertn) genotypes under heat stress. Mol Biol Rep 2024; 51:283. [PMID: 38324135 DOI: 10.1007/s11033-024-09233-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 01/09/2024] [Indexed: 02/08/2024]
Abstract
BACKGROUND Eleusine coracana (L.) Gaertn is a crucial C4 species renowned for its stress robustness and nutritional significance. Because of its adaptability traits, finger millet (ragi) is a storehouse of critical genomic resources for crop improvement. However, more knowledge about this crop's molecular responses to heat stress needs to be gained. METHODS AND RESULTS In the present study, a comparative RNA sequencing analysis was done in the leaf tissue of the finger millet, between the heat-sensitive (KJNS-46) and heat-tolerant (PES-110) cultivars of Ragi, in response to high temperatures. On average, each sample generated about 24 million reads. Interestingly, a comparison of transcriptomic profiling identified 684 transcripts which were significantly differentially expressed genes (DEGs) examined between the heat-stressed samples of both genotypes. The heat-induced change in the transcriptome was confirmed by qRT-PCR using a set of randomly selected genes. Pathway analysis and functional annotation analysis revealed the activation of various genes involved in response to stress specifically heat, oxidation-reduction process, water deprivation, and changes in heat shock protein (HSP) and transcription factors, calcium signaling, and kinase signaling. The basal regulatory genes, such as bZIP, were involved in response to heat stress, indicating that heat stress activates genes involved in housekeeping or related to basal regulatory processes. A substantial percentage of the DEGs belonged to proteins of unknown functions (PUFs), i.e., not yet characterized. CONCLUSION These findings highlight the importance of candidate genes, such as HSPs and pathways that can confer tolerance towards heat stress in ragi. These results will provide valuable information to improve the heat tolerance in heat-susceptible agronomically important varieties of ragi and other crops.
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Affiliation(s)
- Etika Goyal
- Biotechnology and Climate Change Laboratory, National Institute for Plant Biotechnology, New Delhi, India
| | - Amit Kumar Singh
- Biotechnology and Climate Change Laboratory, National Institute for Plant Biotechnology, New Delhi, India
| | - Mahesh Mohanrao Mahajan
- Biotechnology and Climate Change Laboratory, National Institute for Plant Biotechnology, New Delhi, India
| | - Kumar Kanika
- Biotechnology and Climate Change Laboratory, National Institute for Plant Biotechnology, New Delhi, India.
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3
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Friis G, Smith EG, Lovelock CE, Ortega A, Marshell A, Duarte CM, Burt JA. Rapid diversification of grey mangroves (Avicennia marina) driven by geographic isolation and extreme environmental conditions in the Arabian Peninsula. Mol Ecol 2024; 33:e17260. [PMID: 38197286 DOI: 10.1111/mec.17260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 11/13/2023] [Accepted: 12/11/2023] [Indexed: 01/11/2024]
Abstract
Biological systems occurring in ecologically heterogeneous and spatially discontinuous habitats provide an ideal opportunity to investigate the relative roles of neutral and selective factors in driving lineage diversification. The grey mangroves (Avicennia marina) of Arabia occur at the northern edge of the species' range and are subject to variable, often extreme, environmental conditions, as well as historic large fluctuations in habitat availability and connectivity resulting from Quaternary glacial cycles. Here, we analyse fully sequenced genomes sampled from 19 locations across the Red Sea, the Arabian Sea and the Persian/Arabian Gulf (PAG) to reconstruct the evolutionary history of the species in the region and to identify adaptive mechanisms of lineage diversification. Population structure and phylogenetic analyses revealed marked genetic structure correlating with geographic distance and highly supported clades among and within the seas surrounding the Arabian Peninsula. Demographic modelling showed times of divergence consistent with recent periods of geographic isolation and low marine connectivity during glaciations, suggesting the presence of (cryptic) glacial refugia in the Red Sea and the PAG. Significant migration was detected within the Red Sea and the PAG, and across the Strait of Hormuz to the Arabian Sea, suggesting gene flow upon secondary contact among populations. Genetic-environment association analyses revealed high levels of adaptive divergence and detected signs of multi-loci local adaptation driven by temperature extremes and hypersalinity. These results support a process of rapid diversification resulting from the combined effects of historical factors and ecological selection and reveal mangrove peripheral environments as relevant drivers of lineage diversity.
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Affiliation(s)
- Guillermo Friis
- Center for Genomics and Systems Biology (CGSB) and Mubadala ACCESS Center, New York University - Abu Dhabi, Abu Dhabi, United Arab Emirates
| | - Edward G Smith
- Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, North Carolina, USA
| | - Catherine E Lovelock
- School of Environment, The University of Queensland, St Lucia, Queensland, Australia
| | - Alejandra Ortega
- Red Sea Research Center (RSRC) and Computational Bioscience Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
| | - Alyssa Marshell
- Department of Marine Science and Fisheries, College of Agricultural and Marine Sciences, Sultan Qaboos University, Muscat, Oman
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
| | - Carlos M Duarte
- Red Sea Research Center (RSRC) and Computational Bioscience Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia
| | - John A Burt
- Center for Genomics and Systems Biology (CGSB) and Mubadala ACCESS Center, New York University - Abu Dhabi, Abu Dhabi, United Arab Emirates
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4
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Páez-Vacas MI, Funk WC. Thermal limits along tropical elevational gradients: Poison frog tadpoles show plasticity but maintain divergence across elevation. J Therm Biol 2024; 120:103815. [PMID: 38402728 DOI: 10.1016/j.jtherbio.2024.103815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Revised: 02/04/2024] [Accepted: 02/05/2024] [Indexed: 02/27/2024]
Abstract
Temperature is arguably one of the most critical environmental factors impacting organisms at molecular, organismal, and ecological levels. Temperature variation across elevation may cause divergent selection in physiological critical thermal limits (CTMAX and CTMIN). Generally, high elevation populations are predicted to withstand lower environmental temperatures than low elevation populations. Organisms can also exhibit phenotypic plasticity when temperature varies, although theory and empirical evidence suggest that tropical ectotherms have relatively limited ability to acclimate. To study the effect of temperature variation along elevational transects on thermal limits, we measured CTMAX and CTMIN of 934 tadpoles of a poison frog species, Epipedobates anthonyi, along two elevational gradients (200-1700 m asl) in southwestern Ecuador to investigate their thermal tolerance across elevation. We also tested if tadpoles could plastically shift their critical thermal limits in response to exposure to different temperatures representing the range of temperatures they experience in nature (20 °C, 24 °C, and 28 °C). Overall, we found that CTMAX did not change across elevation. In contrast, CTMIN was lower at higher elevations, suggesting that elevational variation in temperature influences this thermal trait. Moreover, all populations shifted their CTMAX and CTMIN according to treatment temperatures, demonstrating an acclimation response. Overall, trends in CTMIN among high, mid, and low elevation populations were maintained despite plastic responses to treatment temperature. These results demonstrate that, for tadpoles of E. anthonyi across tropical elevational gradients, temperature acts as a selective force for CTMIN, even when populations show acclimation abilities in both, CTMAX and CTMIN. Our findings advance our understanding on how environmental variation affects organisms' evolutionary trajectories and their abilities to persist in a changing climate in a tropical biodiversity hotspot.
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Affiliation(s)
- Mónica I Páez-Vacas
- Centro de Investigación en Biodiversidad y Cambio Climático (BioCamb), Ingeniería en Biodiversidad y Recursos Genéticos, Facultad de Ciencias del Medio Ambiente, Universidad Tecnológica Indoamérica, Av. Machala y Sabanilla, Quito, Ecuador; Biology Department, Colorado State University, Fort Collins, CO, USA; Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA; Centro Jambatu de Investigación y Conservación de Anfibios, Fundación Jambatu, San Rafael, Quito, Ecuador.
| | - W Chris Funk
- Biology Department, Colorado State University, Fort Collins, CO, USA; Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA
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Goerge TM, Miles DB. Behavioral plasticity during acute heat stress: heat hardening increases the expression of boldness. J Therm Biol 2024; 119:103778. [PMID: 38171068 DOI: 10.1016/j.jtherbio.2023.103778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 12/14/2023] [Accepted: 12/14/2023] [Indexed: 01/05/2024]
Abstract
Climate change is creating novel thermal environments via rising temperatures and increased frequency of severe weather events. Short-term phenotypic adjustments, i.e., phenotypic plasticity, may facilitate species persistence during adverse environmental conditions. A plastic response that increases thermal tolerance is heat hardening, which buffers organisms from extreme heat and may enhance short term survival. However, heat hardening responses may incur a cost with concomitant decreases in thermal preference and physiological performance. Thus, phenotypic shifts accompanying a hardening response may be maladaptive in warming climates. Understanding how heat hardening influences other traits associated with fitness and survival will clarify its potential as an adaptive response to altered thermal niches. Here, we studied the effects of heat hardening on boldness behavior in the color polymorphic tree lizard, Urosaurus ornatus. Boldness in lizards influences traits such as territory maintenance, mating success, and survivorship and is repeatable in U. ornatus. We found that when lizards underwent a heat hardening response, boldness expression significantly increased. This trend was driven by males. Bolder individuals also exhibited lower field active body temperatures. This behavioral response to heat hardening may increase resource holding potential and territoriality in stressful environments but may also increase predation risk. This study highlights the need to detail associated phenotypic shifts with stress responses to fully understand their adaptive potential in rapidly changing environments.
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Affiliation(s)
- Tyler M Goerge
- Department of Biological Sciences, Ohio University, 7 Irvine Hall, Athens, OH 45701, USA.
| | - Donald B Miles
- Department of Biological Sciences, Ohio University, 7 Irvine Hall, Athens, OH 45701, USA.
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Vega-Sánchez YM, Oyama K, Mendoza-Cuenca LF, Gaytán-Legaria R, González-Rodríguez A. Genomic differentiation and niche divergence in the Hetaerina americana (Odonata) cryptic species complex. Mol Ecol 2024; 33:e17207. [PMID: 37975486 DOI: 10.1111/mec.17207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 10/11/2023] [Accepted: 10/27/2023] [Indexed: 11/19/2023]
Abstract
The evolution of reproductive barriers, that is, the speciation process, implies the limitation of gene flow between populations. Different patterns of genomic differentiation throughout the speciation continuum may provide insights into the causal evolutionary forces of species divergence. In this study, we analysed a cryptic species complex of the genus Hetaerina (Odonata). This complex includes H. americana and H. calverti; however, in H. americana two highly differentiated genetic groups have been previously detected, which, we hypothesize, may correspond to different species with low morphological variation. We obtained single nucleotide polymorphism (SNP) data for 90 individuals belonging to the different taxa in the complex and carried out differentiation tests to identify genetic isolation. The results from STRUCTURE and discriminant analysis of principal components (DAPC), based on almost 5000 SNPs, confirmed the presence of three highly differentiated taxa. Also, we found FST values above 0.5 in pairwise comparisons, which indicates a considerable degree of genetic isolation among the suggested species. We also found low climatic niche overlap among all taxa, suggesting that each group occurs at specific conditions of temperature, precipitation and elevation. We propose that H. americana comprises two cryptic species, which may be reproductively isolated by ecological barriers related to niche divergence, since the morphological variation is minimal and, therefore, mechanical barriers are probably less effective compared to other related species such as H. calverti.
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Affiliation(s)
- Yesenia Margarita Vega-Sánchez
- Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México (UNAM), Morelia, Mexico
| | - Ken Oyama
- Escuela Nacional de Estudios Superiores (ENES) Unidad Morelia, Universidad Nacional Autónoma de México (UNAM), Morelia, Mexico
| | | | - Ricardo Gaytán-Legaria
- Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México (UNAM), Morelia, Mexico
| | - Antonio González-Rodríguez
- Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México (UNAM), Morelia, Mexico
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Zhang YH, Zhao L, Zhang MY, Cao RD, Hou GM, Teng HJ, Zhang JX. Fatty acid metabolism decreased while sexual selection increased in brown rats spreading south. iScience 2023; 26:107742. [PMID: 37731619 PMCID: PMC10507208 DOI: 10.1016/j.isci.2023.107742] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 06/27/2023] [Accepted: 08/24/2023] [Indexed: 09/22/2023] Open
Abstract
For mammals that originate in the cold north, adapting to warmer environments is crucial for southwards invasion. The brown rat (Rattus norvegicus) originated in Northeast China and has become a global pest. R. n. humiliatus (RNH) spread from the northeast, where R. n. caraco (RNC) lives, to North China and diverged to form a subspecies. Genomic analyses revealed that subspecies differentiation was promoted by temperature but impeded by gene flow and that genes related to fatty acid metabolism were under the strongest selection. Transcriptome analyses revealed downregulated hepatic genes related to fatty acid metabolism and upregulated those related to pheromones in RNH vs. RNC. Similar patterns were observed in relation to cold/warm acclimation. RNH preferred mates with stronger pheromone signals intra-populationally and more genetic divergence inter-populationally. We concluded that RNH experienced reduced fat utilization and increased pheromone-mediated sexual selection during its invasion from the cold north to warm south.
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Affiliation(s)
- Yao-Hua Zhang
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
| | - Lei Zhao
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ming-Yu Zhang
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Rui-Dong Cao
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guan-Mei Hou
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hua-Jing Teng
- Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education/Beijing), Department of Radiation Oncology, Peking University Cancer Hospital & Institute, Beijing 100142, China
| | - Jian-Xu Zhang
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beichen West Road 1-5, Chaoyang District, Beijing 100101, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China
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Lü Z, Liu T, Liu Y, Wang Y, Liu J, Liu B, Gong L, Liu L. Climate Adaptation and Drift Shape the Genomes of Two Eel-Goby Sister Species Endemic to Contrasting Latitude. Animals (Basel) 2023; 13:3240. [PMID: 37893964 PMCID: PMC10603712 DOI: 10.3390/ani13203240] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Revised: 10/12/2023] [Accepted: 10/16/2023] [Indexed: 10/29/2023] Open
Abstract
Deciphering the role of climate adaptation in generating genetic divergence and hence speciation is a central question in evolution. Comparisons of genomes of closely related species spanning selective climate gradients are particularly informative in discerning the signatures of selection and thereby providing valuable information concerning the role of climate adaptation in speciation. Here we re-sequenced 99 genomes of the two sister eel-goby species Odontamblyopus lacepedii and O. rebecca, which are endemic to tidal mudflats spanning contrasting latitude gradients, to estimate the influence of divergent climate selection on shaping genome-wide patterns of divergence. The results indicated that genome-wide differentiation between the two species was evident (genome-wide FST = 0.313). Against a background of high baseline genomic divergence, 588 and 1202 elevated divergent loci were detected to be widespread throughout their genomes, as opposed to focused within small islands of genomic regions. These patterns of divergence may arise from divergent climate selection in addition to genetic drift acting through past glacial segregation (1.46 million years ago). We identified several candidate genes that exhibited elevated divergence between the two species, including genes associated with substance metabolism, energy production, and response to environmental cues, all putative candidates closely linked to thermal adaptation expected from the latitude gradient. Interestingly, several candidates related to gamete recognition and time of puberty, and also exhibited elevated divergence, indicating their possible role in pre-zygote isolation and speciation of the two species. Our results would expand our knowledge on the roles of latitude climate adaptation and genetic drift in generating and maintaining biodiversity in marine teleosts.
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Affiliation(s)
- Zhenming Lü
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
| | - Tianwei Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
| | - Yantao Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
| | - Yuzhen Wang
- National Engineering Research Center for Facilitated Marine Aquaculture, Zhejiang Ocean University, Zhoushan 316022, China;
| | - Jing Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
| | - Bingjian Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
| | - Li Gong
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
| | - Liqin Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences and Technology, Zhejiang Ocean University, Zhoushan 316022, China; (Z.L.); (T.L.); (Y.L.); (J.L.); (B.L.); (L.G.)
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Wendering P, Nikoloski Z. Model-driven insights into the effects of temperature on metabolism. Biotechnol Adv 2023; 67:108203. [PMID: 37348662 DOI: 10.1016/j.biotechadv.2023.108203] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Revised: 05/22/2023] [Accepted: 06/18/2023] [Indexed: 06/24/2023]
Abstract
Temperature affects cellular processes at different spatiotemporal scales, and identifying the genetic and molecular mechanisms underlying temperature responses paves the way to develop approaches for mitigating the effects of future climate scenarios. A systems view of the effects of temperature on cellular physiology can be obtained by focusing on metabolism since: (i) its functions depend on transcription and translation and (ii) its outcomes support organisms' development, growth, and reproduction. Here we provide a systematic review of modelling efforts directed at investigating temperature effects on properties of single biochemical reactions, system-level traits, metabolic subsystems, and whole-cell metabolism across different prokaryotes and eukaryotes. We compare and contrast computational approaches and theories that facilitate modelling of temperature effects on key properties of enzymes and their consideration in constraint-based as well as kinetic models of metabolism. In addition, we provide a summary of insights from computational approaches, facilitating integration of omics data from temperature-modulated experiments with models of metabolic networks, and review the resulting biotechnological applications. Lastly, we provide a perspective on how different types of metabolic modelling can profit from developments in machine learning and models of different cellular layers to improve model-driven insights into the effects of temperature relevant for biotechnological applications.
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Affiliation(s)
- Philipp Wendering
- Bioinformatics, Institute of Biochemistry and Biology, University of Potsdam, 14476 Potsdam, Germany; Systems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany
| | - Zoran Nikoloski
- Bioinformatics, Institute of Biochemistry and Biology, University of Potsdam, 14476 Potsdam, Germany; Systems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, 14476 Potsdam, Germany.
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10
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Sil M, Roy A, Bhat HNP, Palden T, Karanth KP, Aravind NA. Role of paleoclimatic and paleohydrological processes in lineage divergence in freshwater organisms: A snippet from lentic genus Pila. Mol Phylogenet Evol 2023; 181:107723. [PMID: 36720420 DOI: 10.1016/j.ympev.2023.107723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 11/09/2022] [Accepted: 01/24/2023] [Indexed: 01/31/2023]
Abstract
The Indian subcontinent is extremely diverse in terms of its flora and fauna. However, only a handful of studies have aimed to understand the diversity of freshwater invertebrates using multiple lines of evidence in recent times. Here we aimed to estimate the cryptic diversity of two widespread freshwater snail species within the genus Pila (Röding, 1798) and uncover the processes behind lineage diversification in these species. We sequenced mitochondrial and nuclear markers from a comprehensive sampling of specimens from different river basins in India. We implemented an integrative taxonomy approach to delimit the lineages in these groups, employing phylogenetic, geometric morphometric and niche modelling-based methods. Then, we investigated the drivers of lineage divergence in these species using population genetic tools in conjunction with divergence time estimation. We found that both species consist of several genetically and ecologically distinct lineages. The genetic data showed that several of these lineages are restricted to a single or a few river basins. The divergence time estimation analyses indicated that the time frame of divergence within the species coincided with paleohydrological and paleoclimatic events in the Miocene. The diversification was primarily driven by allopatric isolation into different river basins. To conclude, the study sheds light on the complex interaction between the habitat preference of the species and the environment in shaping the diversification patterns in this group.
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Affiliation(s)
- Maitreya Sil
- Suri Sehgal Centre for Biodiversity and Conservation, Ashoka Trust for Research in Ecology and the Environment (ATREE), Royal Enclave, Srirampura, Jakkur PO, Bangalore 560064, India; National Institute for Science Education and Research, Bhubaneswar 752050, India.
| | - Abhisikta Roy
- Suri Sehgal Centre for Biodiversity and Conservation, Ashoka Trust for Research in Ecology and the Environment (ATREE), Royal Enclave, Srirampura, Jakkur PO, Bangalore 560064, India
| | - H N Poorna Bhat
- Suri Sehgal Centre for Biodiversity and Conservation, Ashoka Trust for Research in Ecology and the Environment (ATREE), Royal Enclave, Srirampura, Jakkur PO, Bangalore 560064, India
| | - Tenzin Palden
- Centre for Ecological Sciences, Indian Institute of Science, Malleshwaram, Bangalore 560012, India
| | - K Praveen Karanth
- Centre for Ecological Sciences, Indian Institute of Science, Malleshwaram, Bangalore 560012, India
| | - N A Aravind
- Suri Sehgal Centre for Biodiversity and Conservation, Ashoka Trust for Research in Ecology and the Environment (ATREE), Royal Enclave, Srirampura, Jakkur PO, Bangalore 560064, India; Yenepoya Research Centre, Yenepoya University, Derlakatte, Mangalore, India.
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11
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Friedman ST, Muñoz MM. A latitudinal gradient of deep-sea invasions for marine fishes. Nat Commun 2023; 14:773. [PMID: 36774385 PMCID: PMC9922314 DOI: 10.1038/s41467-023-36501-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 02/03/2023] [Indexed: 02/13/2023] Open
Abstract
Although the tropics harbor the greatest species richness globally, recent work has demonstrated that, for many taxa, speciation rates are faster at higher latitudes. Here, we explore lability in oceanic depth as a potential mechanism for this pattern in the most biodiverse vertebrates - fishes. We demonstrate that clades with the highest speciation rates also diversify more rapidly along the depth gradient, drawing a fundamental link between evolutionary and ecological processes on a global scale. Crucially, these same clades also inhabit higher latitudes, creating a prevailing latitudinal gradient of deep-sea invasions concentrated in poleward regions. We interpret these findings in the light of classic ecological theory, unifying the latitudinal variation of oceanic features and the physiological tolerances of the species living there. This work advances the understanding of how niche lability sculpts global patterns of species distributions and underscores the vulnerability of polar ecosystems to changing environmental conditions.
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Affiliation(s)
- Sarah T Friedman
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, 06511, USA. .,Yale Institute for Biospheric Studies, Yale University, New Haven, CT, 06511, USA.
| | - Martha M Muñoz
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, 06511, USA
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12
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Costa APB, Archer FI, Rosel PE, Perrin WF. Tursiops truncatus nuuanu, a new subspecies of the common bottlenose dolphin from the eastern tropical Pacific. J MAMM EVOL 2022. [DOI: 10.1007/s10914-022-09641-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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13
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Bossard RL. Thermal niche partitioning and phenology of Nearctic and Palearctic flea (Siphonaptera) communities on rodents (Mammalia: Rodentia) from five ecoregions. JOURNAL OF VECTOR ECOLOGY : JOURNAL OF THE SOCIETY FOR VECTOR ECOLOGY 2022; 47:217-226. [PMID: 36314677 DOI: 10.52707/1081-1710-47.2.217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Accepted: 08/23/2022] [Indexed: 06/16/2023]
Abstract
Seasonality of fleas (Siphonaptera) may be due to species competition, prompting the idea that flea species partition temperature, along with correlated variables such as moisture (thermal-niche partitioning hypothesis). I compared the fleas of five rodent-flea communities described from the literature for thermal-niche optima by fitting non-linear LRF (Lobry-Rosso-Flandrois) curves to examine whether flea species in a community show distinct, partitioned thermal niches. LRF curves estimate physiological parameters of temperature minimum, optimum, maximum, and maximum abundance, and facilitate comparison between species by summarizing seasonal data. Flea-communities were on Nearctic Southern flying squirrel (Glaucomys volans volans), Richardson's ground-squirrel (Urocitellus richardsonii), North American deer-mouse (Peromyscus maniculatus), and Palearctic Midday jird (Meriones meridianus), and Wagner's gerbil (Dipodillus dasyurus). Flea communities appeared to show seasonality consistent with thermal-niche partitioning. Several flea families and genera had characteristic thermal niches: Ceratophyllidae had broad tolerance to extreme temperature, Leptopsyllidae (one species in this study) to cold, and Pulicidae to hot. In contrast, at the local, species level, climatic speciation could be significant in flea diversification. Non-competition hypotheses (environmental filtering, neutrality) require testing, too. Thermal-niche partitioning may increase flea species richness on hosts and could occur in other insect and plant communities. Implications for biodiversity conservation and disease ecology under global warming are wide-ranging.
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Affiliation(s)
- Robert L Bossard
- Biology Department, Westminster College, Salt Lake City, Utah 84105 U.S.A.,
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14
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Leaver M, Moreno E, Kayhan M, McGaughran A, Rödelsperger C, Sommer RJ, Hyman AA. Adaptation to environmental temperature in divergent clades of the nematode Pristionchus pacificus. Evolution 2022; 76:1660-1673. [PMID: 35696526 DOI: 10.1111/evo.14520] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 02/03/2022] [Accepted: 03/10/2022] [Indexed: 01/22/2023]
Abstract
Because of ongoing climate change, populations of organisms are being subjected to stressful temperatures more often. This is especially problematic for ectothermic organisms, which are likely to be more sensitive to changes in temperature. Therefore, we need to know if ectotherms have adapted to environmental temperature and, if so, what are the evolutionary mechanisms behind such adaptation. Here, we use the nematode Pristionchus pacificus as a case study to investigate thermal adaptation on the Indian Ocean island of La Réunion, which experiences a range of temperatures from coast to summit. We study the evolution of high-temperature tolerance by constructing a phylogenetic tree of strains collected from many different thermal niches. We show that populations of P. pacificus at low altitudes have higher fertility at warmer temperatures. Most likely, this phenotype has arisen recently and at least twice independently, consistent with parallel evolution. We also studied low-temperature tolerance and showed that populations from high altitudes have increased their fertility at cooler temperatures. Together, these data indicate that P. pacificus strains on La Réunion are subject to divergent selection, adapting to hot and cold niches at the coast and summit of the volcano. Precisely defining these thermal niches provides essential information for models that predict the impact of future climate change on these populations.
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Affiliation(s)
- Mark Leaver
- Biotechnologische Zentrum, Technische Universität Dresden, 01307, Dresden, Germany.,Max Planck Institute of Molecular Cell Biology and Genetics, 01307, Dresden, Germany
| | - Eduardo Moreno
- Department of Evolutionary Biology, Max Planck Institute for Developmental Biology, 72076, Tübingen, Germany
| | - Merve Kayhan
- Max Planck Institute of Molecular Cell Biology and Genetics, 01307, Dresden, Germany.,Physiologisches Institut der Universität Zürich, Zürich, CH-8057, Switzerland
| | - Angela McGaughran
- Department of Evolutionary Biology, Max Planck Institute for Developmental Biology, 72076, Tübingen, Germany.,Te Aka Mātuatua - School of Science, University of Waikato, Hamilton, 3240, New Zealand
| | - Christian Rödelsperger
- Department of Evolutionary Biology, Max Planck Institute for Developmental Biology, 72076, Tübingen, Germany
| | - Ralf J Sommer
- Department of Evolutionary Biology, Max Planck Institute for Developmental Biology, 72076, Tübingen, Germany
| | - Anthony A Hyman
- Biotechnologische Zentrum, Technische Universität Dresden, 01307, Dresden, Germany
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15
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Zhu W, Qi Y, Wang X, Shi X, Chang L, Liu J, Zhu L, Jiang J. Multi-Omics Approaches Revealed the Associations of Host Metabolism and Gut Microbiome With Phylogeny and Environmental Adaptation in Mountain Dragons. Front Microbiol 2022; 13:913700. [PMID: 35836421 PMCID: PMC9273973 DOI: 10.3389/fmicb.2022.913700] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Accepted: 05/25/2022] [Indexed: 11/13/2022] Open
Abstract
The molecular basis enabling the adaptation of animals to spatially heterogeneous environments is a critical clue for understanding the variation, formation, and maintenance of biodiversity in the context of global climate change. Mountain dragons (Agamidae: Diploderma) thrive in the Hengduan Mountain Region, a biodiversity hotspot and a typical spatially heterogeneous environment. Here, we compare the liver and muscle metabolome and gut microbiome of 11 geographical populations from three Diploderma species (D. iadinum, D. yulongsense, and D. vela) after 7 days acclimation in the same laboratory conditions. Amino acid metabolism, particularly the products of the glutathione cycle, accounted for major interspecies variations, implying its significance in genetic differentiation among mountain dragons. Notably, the cold-dwelling D. vela and D. yulongense populations tended to have higher glycerophosphate, glycerol-3-phosphocholine, and kinetin levels in their liver, higher carnosine levels in their muscle, and higher Lachnospiraceae levels in their gut. Phylogeny, net primary productivity (NPP), and the temperature had the highest explanation rate to the variations in muscle metabolome, liver metabolome, and gut microbiome, respectively, suggesting heterogeneity of biological systems in response to climatic variations. Therefore, we suggested that the organ heterogeneity in environmental responsiveness might be substantial for mountain dragons to thrive in complicated environments.
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Affiliation(s)
- Wei Zhu
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Yin Qi
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
- Mangkang Ecological Station, Tibet Ecological Safety Monitor Network, Chengdu, China
| | - Xiaoyi Wang
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Xiudong Shi
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Liming Chang
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Jiongyu Liu
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Lifeng Zhu
- College of Life Sciences, Nanjing Normal University, Nanjing, China
- *Correspondence: Lifeng Zhu,
| | - Jianping Jiang
- CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization and Ecological Restoration Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chengdu, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
- Mangkang Ecological Station, Tibet Ecological Safety Monitor Network, Chengdu, China
- Jiangping Jiang,
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16
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Wooliver R, Vtipilthorpe EE, Wiegmann AM, Sheth SN. A viewpoint on ecological and evolutionary study of plant thermal performance curves in a warming world. AOB PLANTS 2022; 14:plac016. [PMID: 35615255 PMCID: PMC9126585 DOI: 10.1093/aobpla/plac016] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 04/07/2022] [Indexed: 06/06/2023]
Abstract
We can understand the ecology and evolution of plant thermal niches through thermal performance curves (TPCs), which are unimodal, continuous reaction norms of performance across a temperature gradient. Though there are numerous plant TPC studies, plants remain under-represented in syntheses of TPCs. Further, few studies quantify plant TPCs from fitness-based measurements (i.e. growth, survival and reproduction at the individual level and above), limiting our ability to draw conclusions from the existing literature about plant thermal adaptation. We describe recent plant studies that use a fitness-based TPC approach to test fundamental ecological and evolutionary hypotheses, some of which have uncovered key drivers of climate change responses. Then, we outline three conceptual questions in ecology and evolutionary biology for future plant TPC studies: (i) Do populations and species harbour genetic variation for TPCs? (ii) Do plant TPCs exhibit plastic responses to abiotic and biotic factors? (iii) Do fitness-based TPCs scale up to population-level thermal niches? Moving forward, plant ecologists and evolutionary biologists can capitalize on TPCs to understand how plasticity and adaptation will influence plant responses to climate change.
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Affiliation(s)
- Rachel Wooliver
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Emma E Vtipilthorpe
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Amelia M Wiegmann
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
| | - Seema N Sheth
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695, USA
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17
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Mejía O, Martínez-Méndez N, Pérez-Miranda F, Matamoros WA. Climatic niche evolution of a widely distributed Neotropical freshwater fish clade. Biol J Linn Soc Lond 2022. [DOI: 10.1093/biolinnean/blab153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Abstract
The role of climate in the speciation process has been documented widely in ectotherms but poorly in freshwater fishes, which represent the richest clade among vertebrates. In this study, we have evaluated the occurrence of phylogenetic niche evolution as a promoter of diversification in the herichthyines (Cichliformes: Cichlidae) clade. We used distributional and bioclimatic data, niche modelling algorithms and phylogenetic comparative methods to study patterns of climatic niche evolution in the herichthyines clade. Our results suggested that herichthyines display signals of phylogenetic niche conservatism, but also signals of niche evolution in the last 14 Myr associated with the availability of new habitats promoting ecological opportunity within the clade. We also concluded that niche conservatism is equally strong in the fundamental and realized niches, which indicates a need to evaluate the potential role of biotic interactions in the evolution of the niche in future studies.
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Affiliation(s)
- Omar Mejía
- Departamento de Zoología, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Ciudad de México, México
| | - Norberto Martínez-Méndez
- Departamento de Zoología, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Ciudad de México, México
| | - Fabian Pérez-Miranda
- Departamento de Zoología, Escuela Nacional de Ciencias Biológicas del Instituto Politécnico Nacional, Ciudad de México, México
- Instituto de Ciencias Biológicas, Universidad de Ciencias y Artes de Chiapas, Chiapas, México
| | - Wilfredo A Matamoros
- Instituto de Ciencias Biológicas, Universidad de Ciencias y Artes de Chiapas, Chiapas, México
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18
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Rivi V, Batabyal A, Benatti C, Blom JM, Lukowiak K. Nature versus nurture in heat stress induced learning between inbred and outbred populations of Lymnaea stagnalis. J Therm Biol 2022; 103:103170. [PMID: 35027189 DOI: 10.1016/j.jtherbio.2021.103170] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 12/03/2021] [Accepted: 12/16/2021] [Indexed: 12/31/2022]
Abstract
Changing environmental conditions often lead to microevolution of traits that are adaptive under the current selection pressure. Currently, one of the major selection pressures is the rise in temperatures globally that has a severe impact on the behavioral ecology of animals. However, the role of thermal stress on neuronal plasticity and memory formation is not well understood. Thermal tolerance and sensitivity to heat stress show variation across populations of the same species experiencing different thermal regimes. We used two populations of the pond snail Lymnaea stagnalis: one lab-bred W-snails and the other wild Delta snails to test heat shock induced learning and memory formation for the Garcia effect learning paradigm. In Garcia effect, a single pairing of a heat stressor (30 °C for 1h) with a novel taste results in a taste-specific negative hedonic shift lasting 24h as long-term memory (LTM) in lab bred W-snails. In this study we used a repeated heat stress procedure to test for increased or decreased sensitivity to the heat before testing for the Garcia effect. We found that lab-bred W-snails show increased sensitivity to heat stress after repeated heat exposure for 7days, leading to enhanced LTM for Garcia effect with only 15min of heat exposure instead of standard 1h. Surprisingly, the freshly collected wild snails do not show Garcia effect. Additionally, F1 generation of wild snails raised and maintained under laboratory conditions still retain their heat stress tolerance similar to their parents and do not show a Garcia effect under standard learning paradigm or even after repeated heat stressor. Thus, we found a differential effect of heat stress on memory formation in wild and lab bred snails. Most interestingly we also show that local environmental (temperature) conditions for one generation is not enough to alter thermal sensitivity in a wild population of L. stagnalis.
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Affiliation(s)
- Veronica Rivi
- Department of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, Modena, Italy; Department of Physiology and Pharmacology, Hotchkiss Brain Institute, Cumming School of Medicine, University of Calgary, Alberta, Canada
| | - Anuradha Batabyal
- Department of Physiology and Pharmacology, Hotchkiss Brain Institute, Cumming School of Medicine, University of Calgary, Alberta, Canada.
| | - Cristina Benatti
- Department of Life Sciences, University of Modena and Reggio Emilia, Modena, Italy; Centre of Neuroscience and Neurotechnology, University of Modena and Reggio Emilia, Modena, Italy
| | - Johanna Mc Blom
- Department of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, Modena, Italy; Centre of Neuroscience and Neurotechnology, University of Modena and Reggio Emilia, Modena, Italy
| | - Ken Lukowiak
- Department of Physiology and Pharmacology, Hotchkiss Brain Institute, Cumming School of Medicine, University of Calgary, Alberta, Canada
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19
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Contrasting environmental drivers of genetic and phenotypic divergence in an Andean poison frog (Epipedobates anthonyi). Heredity (Edinb) 2022; 128:33-44. [PMID: 34718332 PMCID: PMC8733028 DOI: 10.1038/s41437-021-00481-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Revised: 10/17/2021] [Accepted: 10/18/2021] [Indexed: 01/03/2023] Open
Abstract
Phenotypic and genetic divergence are shaped by the homogenizing effects of gene flow and the differentiating processes of genetic drift and local adaptation. Herein, we examined the mechanisms that underlie phenotypic (size and color) and genetic divergence in 35 populations (535 individuals) of the poison frog Epipedobates anthonyi along four elevational gradients (0-1800 m asl) in the Ecuadorian Andes. We found phenotypic divergence in size and color despite relatively low genetic divergence at neutral microsatellite loci. Genetic and phenotypic divergence were both explained by landscape resistance between sites (isolation-by-resistance, IBR), likely due to a cold and dry mountain ridge between the northern and southern elevational transects that limits dispersal and separates two color morphs. Moreover, environmental differences among sites also explained genetic and phenotypic divergence, suggesting isolation-by-environment (IBE). When northern and southern transects were analyzed separately, genetic divergence was predicted either by distance (isolation-by-distance, IBD; northern) or environmental resistance between sites (IBR; southern). In contrast, phenotypic divergence was primarily explained by environmental differences among sites, supporting the IBE hypothesis. These results indicate that although distance and geographic barriers are important drivers of population divergence, environmental variation has a two-fold effect on population divergence. On the one hand, landscape resistance between sites reduces gene flow (IBR), while on the other hand, environmental differences among sites exert divergent selective pressures on phenotypic traits (IBE). Our work highlights the importance of studying both genetic and phenotypic divergence to better understand the processes of population divergence and speciation along ecological gradients.
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20
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Ahmad M, Waraich EA, Skalicky M, Hussain S, Zulfiqar U, Anjum MZ, Habib ur Rahman M, Brestic M, Ratnasekera D, Lamilla-Tamayo L, Al-Ashkar I, EL Sabagh A. Adaptation Strategies to Improve the Resistance of Oilseed Crops to Heat Stress Under a Changing Climate: An Overview. FRONTIERS IN PLANT SCIENCE 2021; 12:767150. [PMID: 34975951 PMCID: PMC8714756 DOI: 10.3389/fpls.2021.767150] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Accepted: 11/11/2021] [Indexed: 05/16/2023]
Abstract
Temperature is one of the decisive environmental factors that is projected to increase by 1. 5°C over the next two decades due to climate change that may affect various agronomic characteristics, such as biomass production, phenology and physiology, and yield-contributing traits in oilseed crops. Oilseed crops such as soybean, sunflower, canola, peanut, cottonseed, coconut, palm oil, sesame, safflower, olive etc., are widely grown. Specific importance is the vulnerability of oil synthesis in these crops against the rise in climatic temperature, threatening the stability of yield and quality. The natural defense system in these crops cannot withstand the harmful impacts of heat stress, thus causing a considerable loss in seed and oil yield. Therefore, a proper understanding of underlying mechanisms of genotype-environment interactions that could affect oil synthesis pathways is a prime requirement in developing stable cultivars. Heat stress tolerance is a complex quantitative trait controlled by many genes and is challenging to study and characterize. However, heat tolerance studies to date have pointed to several sophisticated mechanisms to deal with the stress of high temperatures, including hormonal signaling pathways for sensing heat stimuli and acquiring tolerance to heat stress, maintaining membrane integrity, production of heat shock proteins (HSPs), removal of reactive oxygen species (ROS), assembly of antioxidants, accumulation of compatible solutes, modified gene expression to enable changes, intelligent agricultural technologies, and several other agronomic techniques for thriving and surviving. Manipulation of multiple genes responsible for thermo-tolerance and exploring their high expressions greatly impacts their potential application using CRISPR/Cas genome editing and OMICS technology. This review highlights the latest outcomes on the response and tolerance to heat stress at the cellular, organelle, and whole plant levels describing numerous approaches applied to enhance thermos-tolerance in oilseed crops. We are attempting to critically analyze the scattered existing approaches to temperature tolerance used in oilseeds as a whole, work toward extending studies into the field, and provide researchers and related parties with useful information to streamline their breeding programs so that they can seek new avenues and develop guidelines that will greatly enhance ongoing efforts to establish heat stress tolerance in oilseeds.
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Affiliation(s)
- Muhammad Ahmad
- Department of Agronomy, University of Agriculture, Faisalabad, Pakistan
- Horticultural Sciences Department, Tropical Research and Education Center, Institute of Food and Agricultural Sciences, University of Florida, Homestead, FL, United States
| | | | - Milan Skalicky
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Prague, Czechia
| | - Saddam Hussain
- Department of Agronomy, University of Agriculture, Faisalabad, Pakistan
| | - Usman Zulfiqar
- Department of Agronomy, University of Agriculture, Faisalabad, Pakistan
| | - Muhammad Zohaib Anjum
- Department of Forestry and Range Management, University of Agriculture, Faisalabad, Pakistan
| | - Muhammad Habib ur Rahman
- Department of Agronomy, Muhammad Nawaz Shareef University of Agriculture, Multan, Pakistan
- Crop Science Group, Institute of Crop Science and Resource Conservation (INRES), University Bonn, Bonn, Germany
| | - Marian Brestic
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Prague, Czechia
- Department of Plant Physiology, Slovak University of Agriculture, Nitra, Slovakia
| | - Disna Ratnasekera
- Department of Agricultural Biology, Faculty of Agriculture, University of Ruhuna, Kamburupitiya, Sri Lanka
| | - Laura Lamilla-Tamayo
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Prague, Czechia
| | - Ibrahim Al-Ashkar
- Department of Plant Production, College of Food and Agriculture, King Saud University, Riyadh, Saudi Arabia
- Agronomy Department, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Ayman EL Sabagh
- Department of Field Crops, Faculty of Agriculture, Siirt University, Siirt, Turkey
- Department of Agronomy, Faculty of Agriculture, Kafrelsheikh University, Kafr El-Shaikh, Egypt
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21
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Varying Intensities of Introgression Obscure Incipient Venom-Associated Speciation in the Timber Rattlesnake ( Crotalus horridus). Toxins (Basel) 2021; 13:toxins13110782. [PMID: 34822565 PMCID: PMC8625053 DOI: 10.3390/toxins13110782] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 10/14/2021] [Accepted: 10/25/2021] [Indexed: 11/16/2022] Open
Abstract
Ecologically divergent selection can lead to the evolution of reproductive isolation through the process of ecological speciation, but the balance of responsible evolutionary forces is often obscured by an inadequate assessment of demographic history and the genetics of traits under selection. Snake venoms have emerged as a system for studying the genetic basis of adaptation because of their genetic tractability and contributions to fitness, and speciation in venomous snakes can be associated with ecological diversification such as dietary shifts and corresponding venom changes. Here, we explored the neurotoxic (type A)–hemotoxic (type B) venom dichotomy and the potential for ecological speciation among Timber Rattlesnake (Crotalus horridus) populations. Previous work identified the genetic basis of this phenotypic difference, enabling us to characterize the roles geography, history, ecology, selection, and chance play in determining when and why new species emerge or are absorbed. We identified significant genetic, proteomic, morphological, and ecological/environmental differences at smaller spatial scales, suggestive of incipient ecological speciation between type A and type B C. horridus. Range-wide analyses, however, rejected the reciprocal monophyly of venom type, indicative of varying intensities of introgression and a lack of reproductive isolation across the range. Given that we have now established the phenotypic distributions and ecological niche models of type A and B populations, genome-wide data are needed and capable of determining whether type A and type B C. horridus represent distinct, reproductively isolated lineages due to incipient ecological speciation or differentiated populations within a single species.
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22
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Delclos PJ, Adhikari K, Hassan O, Cambric JE, Matuk AG, Presley RI, Tran J, Sriskantharajah V, Meisel RP. Thermal tolerance and preference are both consistent with the clinal distribution of house fly proto-Y chromosomes. Evol Lett 2021; 5:495-506. [PMID: 34621536 PMCID: PMC8484723 DOI: 10.1002/evl3.248] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 05/20/2021] [Accepted: 06/24/2021] [Indexed: 12/17/2022] Open
Abstract
Selection pressures can vary within localized areas and across massive geographical scales. Temperature is one of the best studied ecologically variable abiotic factors that can affect selection pressures across multiple spatial scales. Organisms rely on physiological (thermal tolerance) and behavioral (thermal preference) mechanisms to thermoregulate in response to environmental temperature. In addition, spatial heterogeneity in temperatures can select for local adaptation in thermal tolerance, thermal preference, or both. However, the concordance between thermal tolerance and preference across genotypes and sexes within species and across populations is greatly understudied. The house fly, Musca domestica, is a well-suited system to examine how genotype and environment interact to affect thermal tolerance and preference. Across multiple continents, house fly males from higher latitudes tend to carry the male-determining gene on the Y chromosome, whereas those from lower latitudes usually have the male determiner on the third chromosome. We tested whether these two male-determining chromosomes differentially affect thermal tolerance and preference as predicted by their geographical distributions. We identify effects of genotype and developmental temperature on male thermal tolerance and preference that are concordant with the natural distributions of the chromosomes, suggesting that temperature variation across the species range contributes to the maintenance of the polymorphism. In contrast, female thermal preference is bimodal and largely independent of congener male genotypes. These sexually dimorphic thermal preferences suggest that temperature-dependent mating dynamics within populations could further affect the distribution of the two chromosomes. Together, the differences in thermal tolerance and preference across sexes and male genotypes suggest that different selection pressures may affect the frequencies of the male-determining chromosomes across different spatial scales.
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Affiliation(s)
- Pablo J. Delclos
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Kiran Adhikari
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Oluwatomi Hassan
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Jessica E. Cambric
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Anna G. Matuk
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Rebecca I. Presley
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Jessica Tran
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
| | - Vyshnika Sriskantharajah
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
- School of Biomedical InformaticsUniversity of Texas Health Science Center at HoustonHoustonTexas77030
| | - Richard P. Meisel
- Department of Biology and BiochemistryUniversity of HoustonHoustonTexas77004
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23
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Pontarp M. Ecological opportunity and adaptive radiations reveal eco-evolutionary perspectives on community structure in competitive communities. Sci Rep 2021; 11:19560. [PMID: 34599238 PMCID: PMC8486866 DOI: 10.1038/s41598-021-98842-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Accepted: 09/14/2021] [Indexed: 11/09/2022] Open
Abstract
It is well known that ecological and evolutionary processes act in concert while shaping biological communities. Diversification can, for example, arise through ecological opportunity and adaptive radiations and competition play an essential role in such diversification. Eco-evolutionary components of competition are thus important for our understanding of community assembly. Such understanding in turn facilitates interpretation of trait- and phylogenetic community patterns in the light of the processes that shape them. Here, I investigate the link between competition, diversification, and trait- and phylogenetic- community patterns using a trait-based model of adaptive radiations. I evaluate the paradigm that competition is an ecological process that drives large trait- and phylogenetic community distances through limiting similarity. Contrary to the common view, I identify low or in some cases counterintuitive relationships between competition and mean phylogenetic distances due to diversification late in evolutionary time and peripheral parts of niche space when competition is weak. Community patterns as a function of competition also change as diversification progresses as the relationship between competition and trait similarity among species can flip from positive to negative with time. The results thus provide novel perspectives on community assembly and emphasize the importance of acknowledging eco-evolutionary processes when interpreting community data.
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Affiliation(s)
- Mikael Pontarp
- Department of Biology, Lund University Biology Building, Sölvegatan 35, 223 62, Lund, Sweden.
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24
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Dwane C, Rundle SD, Tills O, Rezende EL, Galindo J, Rolán-Alvarez E, Truebano M. Divergence in Thermal Physiology Could Contribute to Vertical Segregation in Intertidal Ecotypes of Littorina saxatilis. Physiol Biochem Zool 2021; 94:353-365. [PMID: 34431748 DOI: 10.1086/716176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractThermal stress is a potentially important selective agent in intertidal marine habitats, but the role that thermal tolerance might play in local adaptation across shore height has been underexplored. Northwest Spain is home to two morphologically distinct ecotypes of the periwinkle Littorina saxatilis, separated by shore height and subject to substantial differences in thermal stress exposure. However, despite other biotic and abiotic drivers of ecotype segregation being well studied, their thermal tolerance has not been previously characterized. We investigated thermal tolerance across multiple life history stages by employing the thermal death time (TDT) approach to determine (i) whether the two ecotypes differ in thermal tolerance and (ii) how any differences vary with life history stage. Adults of the two ecotypes differed in their thermal tolerance in line with their shore position: the upper-shore ecotype, which experiences more extreme temperatures, exhibited greater endurance of thermal stress compared with the lower-shore ecotype. This difference was most pronounced at the highest temperatures tested. The proximate physiological basis for these differences is unknown but likely due to a multifarious interaction of traits affecting different parts of the TDT curve. Differences in tolerance between ecotypes were less pronounced in early life history stages but increased with ontogeny, suggesting partial divergence of this trait during development. Thermal tolerance could potentially play an important role in maintaining population divergence and genetic segregation between the two ecotypes, since the increased thermal sensitivity of the lower-shore ecotype may limit its dispersal onto the upper shore and so restrict gene flow.
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25
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Moore MP, Hersch K, Sricharoen C, Lee S, Reice C, Rice P, Kronick S, Medley KA, Fowler-Finn KD. Sex-specific ornament evolution is a consistent feature of climatic adaptation across space and time in dragonflies. Proc Natl Acad Sci U S A 2021; 118:e2101458118. [PMID: 34260398 PMCID: PMC8285952 DOI: 10.1073/pnas.2101458118] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
Adaptation to different climates fuels the origins and maintenance of biodiversity. Detailing how organisms optimize fitness for their local climates is therefore an essential goal in biology. Although we increasingly understand how survival-related traits evolve as organisms adapt to climatic conditions, it is unclear whether organisms also optimize traits that coordinate mating between the sexes. Here, we show that dragonflies consistently adapt to warmer climates across space and time by evolving less male melanin ornamentation-a mating-related trait that also absorbs solar radiation and heats individuals above ambient temperatures. Continent-wide macroevolutionary analyses reveal that species inhabiting warmer climates evolve less male ornamentation. Community-science observations across 10 species indicate that populations adapt to warmer parts of species' ranges through microevolution of smaller male ornaments. Observations from 2005 to 2019 detail that contemporary selective pressures oppose male ornaments in warmer years; and our climate-warming projections predict further decreases by 2070. Conversely, our analyses show that female ornamentation responds idiosyncratically to temperature across space and time, indicating the sexes evolve in different ways to meet the demands of the local climate. Overall, these macro- and microevolutionary findings demonstrate that organisms predictably optimize their mating-related traits for the climate just as they do their survival-related traits.
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Affiliation(s)
- Michael P Moore
- Living Earth Collaborative, Washington University, St. Louis, MO 63130;
| | - Kaitlyn Hersch
- Department of Biology, Washington University, St. Louis, MO 63130
| | | | - Sarah Lee
- Department of Biology, Washington University, St. Louis, MO 63130
| | - Caitlin Reice
- Department of Biology, Washington University, St. Louis, MO 63130
| | - Paul Rice
- Department of Biology, Washington University, St. Louis, MO 63130
| | - Sophie Kronick
- Department of Earth and Planetary Sciences, Washington University, St. Louis, MO 63130
| | - Kim A Medley
- Living Earth Collaborative, Washington University, St. Louis, MO 63130
- Tyson Research Center, Washington University, Eureka, MO 63025
| | - Kasey D Fowler-Finn
- Living Earth Collaborative, Washington University, St. Louis, MO 63130
- Department of Biology, Saint Louis University, St. Louis, MO 63103
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26
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Hagen O, Flück B, Fopp F, Cabral JS, Hartig F, Pontarp M, Rangel TF, Pellissier L. gen3sis: A general engine for eco-evolutionary simulations of the processes that shape Earth's biodiversity. PLoS Biol 2021; 19:e3001340. [PMID: 34252071 PMCID: PMC8384074 DOI: 10.1371/journal.pbio.3001340] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 07/22/2021] [Accepted: 06/23/2021] [Indexed: 11/21/2022] Open
Abstract
Understanding the origins of biodiversity has been an aspiration since the days of early naturalists. The immense complexity of ecological, evolutionary, and spatial processes, however, has made this goal elusive to this day. Computer models serve progress in many scientific fields, but in the fields of macroecology and macroevolution, eco-evolutionary models are comparatively less developed. We present a general, spatially explicit, eco-evolutionary engine with a modular implementation that enables the modeling of multiple macroecological and macroevolutionary processes and feedbacks across representative spatiotemporally dynamic landscapes. Modeled processes can include species' abiotic tolerances, biotic interactions, dispersal, speciation, and evolution of ecological traits. Commonly observed biodiversity patterns, such as α, β, and γ diversity, species ranges, ecological traits, and phylogenies, emerge as simulations proceed. As an illustration, we examine alternative hypotheses expected to have shaped the latitudinal diversity gradient (LDG) during the Earth's Cenozoic era. Our exploratory simulations simultaneously produce multiple realistic biodiversity patterns, such as the LDG, current species richness, and range size frequencies, as well as phylogenetic metrics. The model engine is open source and available as an R package, enabling future exploration of various landscapes and biological processes, while outputs can be linked with a variety of empirical biodiversity patterns. This work represents a key toward a numeric, interdisciplinary, and mechanistic understanding of the physical and biological processes that shape Earth's biodiversity.
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Affiliation(s)
- Oskar Hagen
- Landscape Ecology, Institute of Terrestrial Ecosystems, Department of
Environmental Systems Science, ETH Zürich, Zürich, Switzerland
- Land Change Science Research Unit, Swiss Federal Institute for Forest,
Snow and Landscape Research, WSL, Birmensdorf, Switzerland
| | - Benjamin Flück
- Landscape Ecology, Institute of Terrestrial Ecosystems, Department of
Environmental Systems Science, ETH Zürich, Zürich, Switzerland
- Land Change Science Research Unit, Swiss Federal Institute for Forest,
Snow and Landscape Research, WSL, Birmensdorf, Switzerland
| | - Fabian Fopp
- Landscape Ecology, Institute of Terrestrial Ecosystems, Department of
Environmental Systems Science, ETH Zürich, Zürich, Switzerland
- Land Change Science Research Unit, Swiss Federal Institute for Forest,
Snow and Landscape Research, WSL, Birmensdorf, Switzerland
| | - Juliano S. Cabral
- Ecosystem Modeling, Center for Computational and Theoretical Biology,
University of Würzburg, Würzburg, Germany
| | - Florian Hartig
- Theoretical Ecology, University of Regensburg, Regensburg,
Germany
| | | | - Thiago F. Rangel
- Department of Ecology, Institute of Biological Sciences, Federal
University of Goiás, Goiânia, Brazil
| | - Loïc Pellissier
- Landscape Ecology, Institute of Terrestrial Ecosystems, Department of
Environmental Systems Science, ETH Zürich, Zürich, Switzerland
- Land Change Science Research Unit, Swiss Federal Institute for Forest,
Snow and Landscape Research, WSL, Birmensdorf, Switzerland
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27
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Zheng HY, Guo XL, Price M, He XJ, Zhou SD. Effects of Mountain Uplift and Climatic Oscillations on Phylogeography and Species Divergence of Chamaesium (Apiaceae). FRONTIERS IN PLANT SCIENCE 2021; 12:673200. [PMID: 34108984 PMCID: PMC8183463 DOI: 10.3389/fpls.2021.673200] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Accepted: 04/07/2021] [Indexed: 05/13/2023]
Abstract
Exploring the effects of orographic events and climatic shifts on the geographic distribution of organisms in the Himalayas-Hengduan Mountains (HHM) region and Qinghai-Tibetan Plateau (QTP) is crucial to understand the impact of environmental changes on organism evolution. To gain further insight into these processes, we reconstructed the evolutionary history of nine Chamaesium species distributed across the HHM and QTP regions. In total, 525 individuals from 56 populations of the nine species were analyzed based on three maternally inherited chloroplast fragments (rpl16, trnT-trnL, and trnQ-rps16) and one nuclear DNA region (internal transcribed spacer, ITS). Fifty-two chloroplast DNA (cpDNA) and 47 ITS haplotypes were identified in nine species. All of the cpDNA and ITS haplotypes were species-specific. Phylogenetic analysis suggested that all nine species form a monophyletic clade with high support. Dating analysis and ancestral area reconstruction revealed that the ancestral group of Chamaesium originated in the southern Himalayan region at the beginning of the Paleogene (60.85 Ma). The nine species of Chamaesium then separated well during the last 25 million years started in Miocene. Our maxent modeling indicated the broad-scale distributions of all nine species remained fairly stable from LIG to the present and predicted that it will remain stable into the future. The initial split of Chamaesium was triggered by climate changes following the collision of the Indian plate with the Eurasia plate during the Eocene. Subsequently, divergences within Chamaesium may have been induced by the intense uplift of the QTP, the onset of the monsoon system, and Central Asian aridification. Long evolutionary history, sexual reproduction, and habitat fragmentation could contribute to the high level of genetic diversity of Chamaesium. The higher genetic differentiation among Chamaesium populations may be related to the drastic changes of the external environment in this region and limited seed/pollen dispersal capacity.
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Affiliation(s)
- Hong-Yi Zheng
- Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
| | - Xian-Lin Guo
- Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
| | - Megan Price
- Sichuan Key Laboratory of Conservation Biology on Endangered Wildlife, College of Life Sciences, Sichuan University, Chengdu, China
| | - Xing-Jin He
- Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
| | - Song-Dong Zhou
- Key Laboratory of Bio-Resources and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
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28
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Heat tolerance in desert rodents is correlated with microclimate at inter- and intraspecific levels. J Comp Physiol B 2021; 191:575-588. [PMID: 33638667 DOI: 10.1007/s00360-021-01352-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Revised: 12/14/2020] [Accepted: 01/23/2021] [Indexed: 01/21/2023]
Abstract
Physiological diversity in thermoregulatory traits has been extensively investigated in both endo- and ectothermic vertebrates, with many studies revealing that thermal physiology has evolved in response to selection arising from climate. The majority of studies have investigated how adaptative variation in thermal physiology is correlated with broad-scale climate, but the role of fine-scale microclimate remains less clear . We hypothesised that the heat tolerance limits and evaporative cooling capacity of desert rodents are correlated with microclimates within species-specific diurnal refugia. We tested predictions arising from this hypothesis by comparing thermoregulation in the heat among arboreal black-tailed tree rats (Thallomys nigricauda), Namaqua rock rats (Micaelamys namaquensis) and hairy-footed gerbils (Gerbillurus paeba). Species and populations that occupy hotter diurnal microsites tolerated air temperatures (Ta) ~ 2-4 ℃ higher compared to those species occupying cooler, more thermally buffered microsites. Inter- and intraspecific variation in heat tolerance was attributable to ~ 30% greater evaporative water loss and ~ 44 % lower resting metabolic rates at high Ta, respectively. Our results suggest that microclimates within rodent diurnal refugia are an important correlate of intra- and interspecific physiological variation and reiterate the need to incorporate fine-scale microclimatic conditions when investigating adaptative variation in thermal physiology.
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29
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McGaughran A, Laver R, Fraser C. Evolutionary Responses to Warming. Trends Ecol Evol 2021; 36:591-600. [PMID: 33726946 DOI: 10.1016/j.tree.2021.02.014] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2020] [Revised: 02/23/2021] [Accepted: 02/26/2021] [Indexed: 12/24/2022]
Abstract
Climate change is predicted to dramatically alter biological diversity and distributions, driving extirpations, extinctions, and extensive range shifts across the globe. Warming can also, however, lead to phenotypic or behavioural plasticity, as species adapt to new conditions. Recent genomic research indicates that some species are capable of rapid evolution as selection favours adaptive responses to environmental change and altered or novel niche spaces. New advances are providing mechanistic insights into how temperature might accelerate evolution in the Anthropocene. These discoveries highlight intriguing new research directions - such as using geothermal and polar systems combined with powerful genomic tools - that will help us to understand the processes underpinning adaptive evolution and better project how ecosystems will change in a warming world.
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Affiliation(s)
- Angela McGaughran
- Te Aka Mātuatua - School of Science, University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand.
| | - Rebecca Laver
- Research School of Biology, Australian National University, Canberra, ACT 2601, Australia
| | - Ceridwen Fraser
- Department of Marine Science, University of Otago, PO Box 56, Dunedin 9054, New Zealand
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30
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van Jaarsveld B, Bennett NC, Czenze ZJ, Kemp R, van de Ven TMFN, Cunningham SJ, McKechnie AE. How hornbills handle heat: sex-specific thermoregulation in the southern yellow-billed hornbill. J Exp Biol 2021; 224:jeb.232777. [PMID: 33504586 DOI: 10.1242/jeb.232777] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Accepted: 01/06/2021] [Indexed: 12/22/2022]
Abstract
At a global scale, thermal physiology is correlated with climatic variables such as temperature and aridity. There is also evidence that thermoregulatory traits vary with fine-scale microclimate, but this has received less attention in endotherms. Here, we test the hypothesis that avian thermoregulation varies with microclimate and behavioural constraints in a non-passerine bird. Male and female southern yellow-billed hornbills (Tockus leucomelas) experience markedly different microclimates while breeding, with the female sealing herself into a tree cavity and moulting all her flight feathers during the breeding attempt, becoming entirely reliant on the male for provisioning. We examined interactions between resting metabolic rate (RMR), evaporative water loss (EWL) and core body temperature (T b) at air temperatures (T a) between 30°C and 52°C in male and female hornbills, and quantified evaporative cooling efficiencies and heat tolerance limits. At thermoneutral T a, neither RMR, EWL nor T b differed between sexes. At T a >40°C, however, RMR and EWL of females were significantly lower than those of males, by ∼13% and ∼17%, respectively, despite similar relationships between T b and T a, maximum ratio of evaporative heat loss to metabolic heat production and heat tolerance limits (∼50°C). These sex-specific differences in hornbill thermoregulation support the hypothesis that avian thermal physiology can vary within species in response to fine-scale microclimatic factors. In addition, Q 10 for RMR varied substantially, with Q 10 ≤2 in some individuals, supporting recent arguments that active metabolic suppression may be an underappreciated aspect of endotherm thermoregulation in the heat.
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Affiliation(s)
- Barry van Jaarsveld
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria 0001, South Africa .,DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Nigel C Bennett
- Mammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria 0001, South Africa
| | - Zenon J Czenze
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria 0001, South Africa.,DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Ryno Kemp
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria 0001, South Africa.,DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Tanja M F N van de Ven
- FitzPatrick Institute of African Ornithology, DSI-NRF Centre of Excellence, Department of Biological Sciences, University of Cape Town, Private Bag X3, Rondebosch 7701, South Africa.,Brain Function Research Group, School of Physiology, Faculty of Health Sciences, University of the Witwatersrand, Parktown 2193, South Africa
| | - Susan J Cunningham
- FitzPatrick Institute of African Ornithology, DSI-NRF Centre of Excellence, Department of Biological Sciences, University of Cape Town, Private Bag X3, Rondebosch 7701, South Africa
| | - Andrew E McKechnie
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria 0001, South Africa.,DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
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31
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Coman A, Potter S, Moritz C, Campbell CD, Joseph L. Biotic and abiotic drivers of evolution in some Australian thornbills (Passeriformes:
Acanthiza
) in allopatry, sympatry, and parapatry including a case of character displacement. J ZOOL SYST EVOL RES 2020. [DOI: 10.1111/jzs.12355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Amelia Coman
- Division of Ecology and Evolution Research School of Biology, and Centre for Biodiversity Analysis The Australian National University Acton ACT Australia
- Australian National Wildlife Collection CSIRO National Research Collections Australia Canberra ACT Australia
| | - Sally Potter
- Division of Ecology and Evolution Research School of Biology, and Centre for Biodiversity Analysis The Australian National University Acton ACT Australia
| | - Craig Moritz
- Division of Ecology and Evolution Research School of Biology, and Centre for Biodiversity Analysis The Australian National University Acton ACT Australia
| | - Catriona D. Campbell
- Australian National Wildlife Collection CSIRO National Research Collections Australia Canberra ACT Australia
| | - Leo Joseph
- Australian National Wildlife Collection CSIRO National Research Collections Australia Canberra ACT Australia
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32
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Yebra-Pimentel ES, Reis B, Gessner J, Wuertz S, Dirks RPH. Temperature training improves transcriptional homeostasis after heat shock in juvenile Atlantic sturgeon (Acipenser oxyrinchus). FISH PHYSIOLOGY AND BIOCHEMISTRY 2020; 46:1653-1664. [PMID: 32583280 DOI: 10.1007/s10695-020-00818-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2019] [Accepted: 05/05/2020] [Indexed: 06/11/2023]
Abstract
Exposure to high temperatures can lead to thermotolerance in fish, which is hypothesized to potentially improve post-release survival in species under restocking programs, like Atlantic sturgeon. The aim of this study was to determine whether Atlantic sturgeon juveniles exposed to a 4-week temperature treatment respond differently to a subsequent heat shock than juveniles exposed to heat shock for the first time (naive fish). Response to heat shock was assessed by mapping the liver transcriptome. In total, 838 unique contigs were differentially expressed between the trained and the control group (592 downregulated, 261 upregulated, and 15 down- or upregulated, depending on the condition), corresponding to genes involved in the response to heat, tissue damage, proteolysis, and metabolism. Temperature-trained fish showed 2-4-fold fewer dysregulated contigs than naive fish, indicating their ability to maintain and recover homeostasis faster. During heat shock, hspc1 was upregulated in both experimental groups, while hspa1 and dnaja4 were exclusively upregulated in the control. Overall, compensatory mechanisms were observed in addition to the heat shock response. Only two genes, fgg and apnl, were upregulated at nearly all timepoints in both groups. Peptidases were more strongly downregulated in control fish, which also showed a reduction in lipid metabolism during recovery. Keratins, pck1, gadd45ga, and gadd45gb were differentially expressed between trained and control fish, and due to their roles in tissue protection and ER stress reduction, they might be responsible for the maintenance of the transcriptional homeostasis observed in trained fish.
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Affiliation(s)
- Elena Santidrián Yebra-Pimentel
- ZF-screens B.V., 2333 CH, Leiden, The Netherlands.
- Department of Basic Sciences and Aquatic Medicine, Norwegian University of Life Sciences, 0454, Oslo, Norway.
| | - Bruno Reis
- Centro Interdisciplinar de Investigação Marinha e Ambiental (CIIMAR), Universidade do Porto, 4450-208, Matosinhos, Portugal
| | - Jörn Gessner
- Leibniz Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
| | - Sven Wuertz
- Leibniz Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
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33
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Martin BT, Douglas MR, Chafin TK, Placyk JS, Birkhead RD, Phillips CA, Douglas ME. Contrasting signatures of introgression in North American box turtle (
Terrapene
spp.) contact zones. Mol Ecol 2020; 29:4186-4202. [DOI: 10.1111/mec.15622] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2019] [Revised: 08/19/2020] [Accepted: 08/24/2020] [Indexed: 12/14/2022]
Affiliation(s)
- Bradley T. Martin
- Department of Biological Sciences University of Arkansas Fayetteville AR USA
| | - Marlis R. Douglas
- Department of Biological Sciences University of Arkansas Fayetteville AR USA
| | - Tyler K. Chafin
- Department of Biological Sciences University of Arkansas Fayetteville AR USA
| | - John S. Placyk
- Department of Biology University of Texas Tyler TX USA
- Science Division Trinity Valley Community College Athens TX USA
| | | | - Christopher A. Phillips
- Illinois Natural History Survey Prairie Research Institute University of Illinois Champaign IL USA
| | - Michael E. Douglas
- Department of Biological Sciences University of Arkansas Fayetteville AR USA
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34
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Garcia-Elfring A, Barrett RDH, Millien V. Genomic Signatures of Selection along a Climatic Gradient in the Northern Range Margin of the White-Footed Mouse (Peromyscus leucopus). J Hered 2020; 110:684-695. [PMID: 31300816 DOI: 10.1093/jhered/esz045] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2018] [Accepted: 07/10/2019] [Indexed: 02/07/2023] Open
Abstract
Identifying genetic variation involved in thermal adaptation is likely to yield insights into how species adapt to different climates. Physiological and behavioral responses associated with overwintering (e.g., torpor) are thought to serve important functions in climate adaptation. In this study, we use 2 isolated Peromyscus leucopus lineages on the northern margin of the species range to identify single nucleotide polymorphisms (SNPs) showing a strong environmental association and test for evidence of parallel evolution. We found signatures of clinal selection in each lineage, but evidence of parallelism was limited, with only 2 SNPs showing parallel allele frequencies across transects. These parallel SNPs map to a gene involved in protection against iron-dependent oxidative stress (Fxn) and to a gene with unknown function but containing a forkhead-associated domain (Fhad1). Furthermore, within transects, we find significant clinal patterns in genes enriched for functions associated with glycogen homeostasis, synaptic function, intracellular Ca2+ balance, H3 histone modification, as well as the G2/M transition of cell division. Our results are consistent with recent literature on the cellular and molecular basis of climate adaptation in small mammals and provide candidate genomic regions for further study.
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Affiliation(s)
- Alan Garcia-Elfring
- Redpath Museum, McGill University, Montreal, QC, Canada.,Department of Biology, McGill University, Montreal, QC, Canada
| | - Rowan D H Barrett
- Redpath Museum, McGill University, Montreal, QC, Canada.,Department of Biology, McGill University, Montreal, QC, Canada
| | - Virginie Millien
- Redpath Museum, McGill University, Montreal, QC, Canada.,Department of Biology, McGill University, Montreal, QC, Canada
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35
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Li B, Yaegashi S, Carvajal TM, Gamboa M, Chiu M, Ren Z, Watanabe K. Machine-learning-based detection of adaptive divergence of the stream mayfly Ephemera strigata populations. Ecol Evol 2020; 10:6677-6687. [PMID: 32724541 PMCID: PMC7381564 DOI: 10.1002/ece3.6398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Revised: 04/21/2020] [Accepted: 04/30/2020] [Indexed: 11/07/2022] Open
Abstract
Adaptive divergence is a key mechanism shaping the genetic variation of natural populations. A central question linking ecology with evolutionary biology is how spatial environmental heterogeneity can lead to adaptive divergence among local populations within a species. In this study, using a genome scan approach to detect candidate loci under selection, we examined adaptive divergence of the stream mayfly Ephemera strigata in the Natori River Basin in northeastern Japan. We applied a new machine-learning method (i.e., random forest) besides traditional distance-based redundancy analysis (dbRDA) to examine relationships between environmental factors and adaptive divergence at non-neutral loci. Spatial autocorrelation analysis based on neutral loci was employed to examine the dispersal ability of this species. We conclude the following: (a) E. strigata show altitudinal adaptive divergence among the populations in the Natori River Basin; (b) random forest showed higher resolution for detecting adaptive divergence than traditional statistical analysis; and (c) separating all markers into neutral and non-neutral loci could provide full insight into parameters such as genetic diversity, local adaptation, and dispersal ability.
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Affiliation(s)
- Bin Li
- Insititute of Environmental and EcologyShandong Normal UniversityJinanChina
- Department of Civil and Environmental EngineeringEhime UniversityMatsuyamaJapan
| | - Sakiko Yaegashi
- Department of Civil and Environmental EngineeringEhime UniversityMatsuyamaJapan
- Department of Civil and Environmental EngineeringUniversity of YamanashiYamanashiJapan
| | | | - Maribet Gamboa
- Department of Civil and Environmental EngineeringEhime UniversityMatsuyamaJapan
| | - Ming‐Chih Chiu
- Department of Civil and Environmental EngineeringEhime UniversityMatsuyamaJapan
| | - Zongming Ren
- Insititute of Environmental and EcologyShandong Normal UniversityJinanChina
| | - Kozo Watanabe
- Department of Civil and Environmental EngineeringEhime UniversityMatsuyamaJapan
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36
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Wadsworth CB, Okada Y, Dopman EB. Phenology-dependent cold exposure and thermal performance of Ostrinia nubilalis ecotypes. BMC Evol Biol 2020; 20:34. [PMID: 32138649 PMCID: PMC7059338 DOI: 10.1186/s12862-020-1598-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Accepted: 02/26/2020] [Indexed: 01/28/2023] Open
Abstract
Background Understanding adaptation involves establishing connections between selective agents and beneficial population responses. However, relatively little attention has been paid to seasonal adaptation, in part, because it requires complex and integrative knowledge about seasonally fluctuating environmental factors, the effects of variable phenology on exposure to those factors, and evidence for temporal specialization. In the European corn borer moth, Ostrinia nubilalis, sympatric pheromone strains exploit the same host plant (Zea mays) but may genetically differ in phenology and be reproductively “isolated by time.” Z strain populations in eastern North America have been shown to have a prolonged larval diapause and produce one annual mating flight (July), whereas E strain populations complete an earlier (June) and a later (August) mating flight by shortening diapause duration. Here, we find evidence consistent with seasonal “adaptation by time” between these ecotypes. Results We use 12 years of field observation of adult seasonal abundance to estimate phenology of ecotype life cycles and to quantify life-stage specific climatic conditions. We find that the observed reduction of diapause duration in the E strain leads their non-diapausing, active life stages to experience a ~ 4 °C colder environment compared to the equivalent life stages in the Z strain. For a representative pair of populations under controlled laboratory conditions, we compare life-stage specific cold tolerance and find non-diapausing, active life stages in the E strain have as much as a 60% greater capacity to survive rapid cold shock. Enhanced cold hardiness appears unrelated to life-stage specific changes in the temperature at which tissues freeze. Conclusions Our results suggest that isolation by time and adaptation by time may both contribute to population divergence, and they argue for expanded study in this species of allochronic populations in nature experiencing the full spectrum of seasonal environments. Cyclical selective pressures are inherent properties of seasonal habitats. Diverse fluctuating selective agents across each year (temperature, predation, competition, precipitation, etc.) may therefore be underappreciated drivers of biological diversity.
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Affiliation(s)
- Crista B Wadsworth
- Department of Biology, Tufts University, 200 Boston Ave, Suite 4700, Medford, MA, 02155, USA. .,Current Affiliation: Rochester Institute of Technology, Thomas H. Gosnell School of Life Sciences, 85 Lomb Memorial Drive, Rochester, NY, 14623, USA.
| | - Yuta Okada
- Department of Biology, Tufts University, 200 Boston Ave, Suite 4700, Medford, MA, 02155, USA
| | - Erik B Dopman
- Department of Biology, Tufts University, 200 Boston Ave, Suite 4700, Medford, MA, 02155, USA.
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Walden N, Lucek K, Willi Y. Lineage‐specific adaptation to climate involves flowering time in North American
Arabidopsis lyrata. Mol Ecol 2020; 29:1436-1451. [DOI: 10.1111/mec.15338] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 11/16/2019] [Accepted: 12/10/2019] [Indexed: 01/06/2023]
Affiliation(s)
- Nora Walden
- Department of Environmental Sciences University of Basel Basel Switzerland
- Centre for Organismal Studies Heidelberg University of Heidelberg Heidelberg Germany
| | - Kay Lucek
- Department of Environmental Sciences University of Basel Basel Switzerland
| | - Yvonne Willi
- Department of Environmental Sciences University of Basel Basel Switzerland
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Skúlason S, Parsons KJ, Svanbäck R, Räsänen K, Ferguson MM, Adams CE, Amundsen P, Bartels P, Bean CW, Boughman JW, Englund G, Guðbrandsson J, Hooker OE, Hudson AG, Kahilainen KK, Knudsen R, Kristjánsson BK, Leblanc CA, Jónsson Z, Öhlund G, Smith C, Snorrason SS. A way forward with eco evo devo: an extended theory of resource polymorphism with postglacial fishes as model systems. Biol Rev Camb Philos Soc 2019; 94:1786-1808. [PMID: 31215138 PMCID: PMC6852119 DOI: 10.1111/brv.12534] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2018] [Revised: 05/12/2019] [Accepted: 05/20/2019] [Indexed: 12/16/2022]
Abstract
A major goal of evolutionary science is to understand how biological diversity is generated and altered. Despite considerable advances, we still have limited insight into how phenotypic variation arises and is sorted by natural selection. Here we argue that an integrated view, which merges ecology, evolution and developmental biology (eco evo devo) on an equal footing, is needed to understand the multifaceted role of the environment in simultaneously determining the development of the phenotype and the nature of the selective environment, and how organisms in turn affect the environment through eco evo and eco devo feedbacks. To illustrate the usefulness of an integrated eco evo devo perspective, we connect it with the theory of resource polymorphism (i.e. the phenotypic and genetic diversification that occurs in response to variation in available resources). In so doing, we highlight fishes from recently glaciated freshwater systems as exceptionally well-suited model systems for testing predictions of an eco evo devo framework in studies of diversification. Studies on these fishes show that intraspecific diversity can evolve rapidly, and that this process is jointly facilitated by (i) the availability of diverse environments promoting divergent natural selection; (ii) dynamic developmental processes sensitive to environmental and genetic signals; and (iii) eco evo and eco devo feedbacks influencing the selective and developmental environments of the phenotype. We highlight empirical examples and present a conceptual model for the generation of resource polymorphism - emphasizing eco evo devo, and identify current gaps in knowledge.
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Affiliation(s)
- Skúli Skúlason
- Department of Aquaculture and Fish BiologyHólar UniversitySauðárkrókur, 551Iceland
- Icelandic Museum of Natural History, Brynjólfsgata 5ReykjavíkIS‐107Iceland
| | - Kevin J. Parsons
- Institute of Biodiversity, Animal Health & Comparative MedicineUniversity of GlasgowGlasgow, G12 8QQU.K.
| | - Richard Svanbäck
- Animal Ecology, Department of Ecology and Genetics, Science for Life LaboratoryUppsala University, Norbyvägen 18DUppsala, SE‐752 36Sweden
| | - Katja Räsänen
- Department of Aquatic EcologyEAWAG, Swiss Federal Institute of Aquatic Science and Technology, and Institute of Integrative Biology, ETH‐Zurich, Ueberlandstrasse 133CH‐8600DübendorfSwitzerland
| | - Moira M. Ferguson
- Department of Integrative BiologyUniversity of GuelphGuelph, Ontario N1G 2W1Canada
| | - Colin E. Adams
- Scottish Centre for Ecology and the Natural Environment, IBAHCMUniversity of GlasgowGlasgow G12 8QQU.K.
| | - Per‐Arne Amundsen
- Freshwater Ecology Group, Department of Arctic and Marine Biology, Faculty of Biosciences, Fisheries and EconomicsUniversity of TromsöTromsö, N‐9037Norway
| | - Pia Bartels
- Department of Ecology and Environmental ScienceUmeå UniversityUmeå, SE‐90187Sweden
| | - Colin W. Bean
- Scottish Natural Heritage, Caspian House, Mariner Court, Clydebank Business ParkClydebank, G81 2NRU.K.
| | - Janette W. Boughman
- Department of Integrative BiologyMichigan State UniversityEast Lansing, MI 48824U.S.A.
| | - Göran Englund
- Department of Ecology and Environmental ScienceUmeå UniversityUmeå, SE‐90187Sweden
| | - Jóhannes Guðbrandsson
- Institute of Life and Environmental SciencesUniversity of IcelandReykjavik, 101Iceland
| | | | - Alan G. Hudson
- Department of Ecology and Environmental ScienceUmeå UniversityUmeå, SE‐90187Sweden
| | - Kimmo K. Kahilainen
- Inland Norway University of Applied Sciences, Department of Forestry and Wildlife Management, Campus Evenstad, Anne Evenstadvei 80Koppang, NO‐2480Norway
| | - Rune Knudsen
- Freshwater Ecology Group, Department of Arctic and Marine Biology, Faculty of Biosciences, Fisheries and EconomicsUniversity of TromsöTromsö, N‐9037Norway
| | | | - Camille A‐L. Leblanc
- Department of Aquaculture and Fish BiologyHólar UniversitySauðárkrókur, 551Iceland
| | - Zophonías Jónsson
- Institute of Life and Environmental SciencesUniversity of IcelandReykjavik, 101Iceland
| | - Gunnar Öhlund
- Department of Ecology and Environmental ScienceUmeå UniversityUmeå, SE‐90187Sweden
| | - Carl Smith
- School of BiologyUniversity of St Andrews, St. AndrewsFife, KY16 9AJU.K.
| | - Sigurður S. Snorrason
- Institute of Life and Environmental SciencesUniversity of IcelandReykjavik, 101Iceland
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Hidalgo K, Beaugeard E, Renault D, Dedeine F, Lécureuil C. Physiological and biochemical responses to thermal stress vary among genotypes in the parasitic wasp Nasonia vitripennis. JOURNAL OF INSECT PHYSIOLOGY 2019; 117:103909. [PMID: 31295454 DOI: 10.1016/j.jinsphys.2019.103909] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Revised: 06/26/2019] [Accepted: 06/28/2019] [Indexed: 06/09/2023]
Abstract
In ectotherm species such as insects, thermal fluctuations represent a major environmental factor driving development, survival and reproduction of individuals. Reproductive traits are particularly sensitive to heat stress that can induce a permanent sterility, or at least hypofertility, of adult males. This study aims to compare physiological and biochemical responses associated to male performances to an exposure of 24 h to moderately high temperature (36 °C) among three inbred lines of N. vitripennis (AsymC, Cor, Oul). Cor males showed very specific metabolic adjustments compared to the two other lines. By contrast, Oul males showed stronger phenotypic adjustment of its life cycle, and produced metabolic water to compensate water loss by heat stress. Finally, AsymC males had probably more difficulties to acclimate at 36 °C, even for a short period, as their adult longevity was significantly reduced. Thus, the ability of developmental plasticity in N. vitripennis males exposed to heat stress appears to be dependent of their genotypes.
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Affiliation(s)
- Kevin Hidalgo
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS Université de Tours, UFR Sciences et Techniques, Parc Grandmont, Tours, France
| | - Erika Beaugeard
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS Université de Tours, UFR Sciences et Techniques, Parc Grandmont, Tours, France
| | - David Renault
- Université de Rennes 1, UMR CNRS 6553 Ecobio, Campus de Beaulieu, 263 Avenue du Gal Leclerc, CS 74205 35042 Rennes Cedex, France; Institut Universitaire de France, 1 rue Descartes, 75231 Paris Cedex 05, France
| | - Franck Dedeine
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS Université de Tours, UFR Sciences et Techniques, Parc Grandmont, Tours, France
| | - Charlotte Lécureuil
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS Université de Tours, UFR Sciences et Techniques, Parc Grandmont, Tours, France.
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40
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Stock W, Vanelslander B, Rüdiger F, Sabbe K, Vyverman W, Karsten U. Thermal Niche Differentiation in the Benthic Diatom Cylindrotheca closterium (Bacillariophyceae) Complex. Front Microbiol 2019; 10:1395. [PMID: 31293543 PMCID: PMC6598499 DOI: 10.3389/fmicb.2019.01395] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Accepted: 06/04/2019] [Indexed: 01/01/2023] Open
Abstract
Coastal waters are expected to undergo severe warming in the coming decades. Very little is known about how diatoms, the dominant primary producers in these habitats, will cope with these changes. We investigated the thermal niche of Cylindrotheca closterium, a widespread benthic marine diatom, using 24 strains collected over a wide latitudinal gradient. A multi-marker phylogeny in combination with a species delimitation approach shows that C. closterium represents a (pseudo)cryptic species complex, and this is reflected in distinct growth response patterns in terms of optimum growth temperature, maximum growth rate, and thermal niche width. Strains from the same clade displayed a similar thermal response, suggesting niche conservation between closely related strains. Due to their lower maximum growth rate and smaller thermal niche width, we expect the polar species to be particularly sensitive to warming, and, in the absence of adaptation, to be replaced with species from lower latitudes.
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Affiliation(s)
- Willem Stock
- Laboratory of Protistology and Aquatic Ecology, Department of Biology, Ghent University, Ghent, Belgium
| | - Bart Vanelslander
- Laboratory of Protistology and Aquatic Ecology, Department of Biology, Ghent University, Ghent, Belgium
| | - Franziska Rüdiger
- Institute of Biological Sciences, Applied Ecology and Phycology, University of Rostock, Rostock, Germany
| | - Koen Sabbe
- Laboratory of Protistology and Aquatic Ecology, Department of Biology, Ghent University, Ghent, Belgium
| | - Wim Vyverman
- Laboratory of Protistology and Aquatic Ecology, Department of Biology, Ghent University, Ghent, Belgium
| | - Ulf Karsten
- Institute of Biological Sciences, Applied Ecology and Phycology, University of Rostock, Rostock, Germany
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41
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Aguirre-Liguori JA, Gaut BS, Jaramillo-Correa JP, Tenaillon MI, Montes-Hernández S, García-Oliva F, Hearne SJ, Eguiarte LE. Divergence with gene flow is driven by local adaptation to temperature and soil phosphorus concentration in teosinte subspecies (Zea mays parviglumis and Zea mays mexicana). Mol Ecol 2019; 28:2814-2830. [PMID: 30980686 DOI: 10.1111/mec.15098] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2018] [Revised: 03/27/2019] [Accepted: 04/08/2019] [Indexed: 01/03/2023]
Abstract
Patterns of genomic divergence between hybridizing taxa can be heterogeneous along the genome. Both differential introgression and local adaptation may contribute to this pattern. Here, we analysed two teosinte subspecies, Zea mays ssp. parviglumis and ssp. mexicana, to test whether their divergence has occurred in the face of gene flow and to infer which environmental variables have been important drivers of their ecological differentiation. We generated 9,780 DArTseqTM SNPs for 47 populations, and used an additional data set containing 33,454 MaizeSNP50 SNPs for 49 populations. With these data, we inferred features of demographic history and performed genome wide scans to determine the number of outlier SNPs associated with climate and soil variables. The two data sets indicate that divergence has occurred or been maintained despite continuous gene flow and/or secondary contact. Most of the significant SNP associations were to temperature and to phosphorus concentration in the soil. A large proportion of these candidate SNPs were located in regions of high differentiation that had been identified previously as putative inversions. We therefore propose that genomic differentiation in teosintes has occurred by a process of adaptive divergence, with putative inversions contributing to reduced gene flow between locally adapted populations.
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Affiliation(s)
- Jonás A Aguirre-Liguori
- Departamento de Ecología Evolutiva, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México, México
| | - Brandon S Gaut
- Department of Ecology and Evolutionary Biology, University of California, Irvine, California
| | - Juan Pablo Jaramillo-Correa
- Departamento de Ecología Evolutiva, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México, México
| | - Maud I Tenaillon
- Génétique Quantitative et Evolution- Le Moulon, INRA, Gif-sur-Yvette, France
| | - Salvador Montes-Hernández
- Campo Experimental Bajío, Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias, Celaya, México
| | - Felipe García-Oliva
- Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México, Morelia, México
| | - Sarah J Hearne
- International Maize and Wheat Improvement Center (CIMMYT), Texcoco, México
| | - Luis E Eguiarte
- Departamento de Ecología Evolutiva, Instituto de Ecología, Universidad Nacional Autónoma de México, Ciudad de México, México
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42
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Gilbert AL, Miles DB. Spatiotemporal variation in thermal niches suggests lability rather than conservatism of thermal physiology along an environmental gradient. Biol J Linn Soc Lond 2019. [DOI: 10.1093/biolinnean/blz093] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
Abstract
Temperature variation throughout a species range can be extensive and exert divergent spatiotemporal patterns of selection. The estimation of phenotypic differences of populations along environmental gradients provides information regarding population-level responses to changing environments and evolutionary lability in climate-relevant traits. However, few studies have found physiological differentiation across environmental gradients attributable to behavioural thermoregulation buffering physiological evolution. Here, we compared thermal sensitivity of physiological performance among three populations of the ornate tree lizard (Urosaurus ornatus) along a 1100 m elevational gradient in southeastern Arizona across years in order to determine whether spatial differences in thermal environments are capable of driving local physiological differentiation. Lizards exhibited significant population-level differences in thermal physiology. The thermal traits of lizards at low elevations included warmer body temperatures and higher preferred and critical thermal temperatures. In contrast, lizards at higher elevations had cooler body temperatures and lower preferred and critical thermal temperatures. Populations also exhibited differences in the optimal temperature for performance and thermal performance breadth. The direction of population variation was consistent across years. Environmental gradients can provide model systems for studying the evolution of thermal physiology, and our study is one of the first to suggest that population differentiation in thermal physiology could be more prominent than previously thought.
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Affiliation(s)
- Anthony L Gilbert
- Department of Biological Sciences, Ohio University, Athens, OH, USA
- Ohio Center for Ecological and Evolutionary Studies, Athens, OH, USA
| | - Donald B Miles
- Department of Biological Sciences, Ohio University, Athens, OH, USA
- Ohio Center for Ecological and Evolutionary Studies, Athens, OH, USA
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43
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Delhey K, Dale J, Valcu M, Kempenaers B. Reconciling ecogeographical rules: rainfall and temperature predict global colour variation in the largest bird radiation. Ecol Lett 2019; 22:726-736. [DOI: 10.1111/ele.13233] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Revised: 01/09/2019] [Accepted: 01/16/2019] [Indexed: 01/04/2023]
Affiliation(s)
- Kaspar Delhey
- School of Biological Sciences; Monash University; Clayton Vic. Australia
| | - James Dale
- Institute of Natural and Mathematical Sciences; Massey University; Auckland New Zealand
| | - Mihai Valcu
- Max Planck Institute for Ornithology; Seewiesen Germany
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44
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Luquet E, Rödin Mörch P, Cortázar‐Chinarro M, Meyer‐Lucht Y, Höglund J, Laurila A. Post‐glacial colonization routes coincide with a life‐history breakpoint along a latitudinal gradient. J Evol Biol 2019; 32:356-368. [DOI: 10.1111/jeb.13419] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Revised: 01/23/2019] [Accepted: 01/24/2019] [Indexed: 01/17/2023]
Affiliation(s)
- Emilien Luquet
- Univ LyonUniversité Claude Bernard Lyon 1CNRSENTPEUMR5023 LEHNA Villeurbanne France
| | - Patrik Rödin Mörch
- Animal Ecology/Department of Ecology and GeneticsEvolutionary Biology CentreUppsala University Uppsala Sweden
| | - Maria Cortázar‐Chinarro
- Animal Ecology/Department of Ecology and GeneticsEvolutionary Biology CentreUppsala University Uppsala Sweden
| | - Yvonne Meyer‐Lucht
- Animal Ecology/Department of Ecology and GeneticsEvolutionary Biology CentreUppsala University Uppsala Sweden
| | - Jacob Höglund
- Animal Ecology/Department of Ecology and GeneticsEvolutionary Biology CentreUppsala University Uppsala Sweden
| | - Anssi Laurila
- Animal Ecology/Department of Ecology and GeneticsEvolutionary Biology CentreUppsala University Uppsala Sweden
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45
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Teske PR, Sandoval-Castillo J, Golla TR, Emami-Khoyi A, Tine M, von der Heyden S, Beheregaray LB. Thermal selection as a driver of marine ecological speciation. Proc Biol Sci 2019; 286:20182023. [PMID: 30963923 PMCID: PMC6408613 DOI: 10.1098/rspb.2018.2023] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2018] [Accepted: 01/11/2019] [Indexed: 12/19/2022] Open
Abstract
Intraspecific genetic structure in widely distributed marine species often mirrors the boundaries between temperature-defined bioregions. This suggests that the same thermal gradients that maintain distinct species assemblages also drive the evolution of new biodiversity. Ecological speciation scenarios are often invoked to explain such patterns, but the fact that adaptation is usually only identified when phylogenetic splits are already evident makes it impossible to rule out the alternative scenario of allopatric speciation with subsequent adaptation. We integrated large-scale genomic and environmental datasets along one of the world's best-defined marine thermal gradients (the South African coastline) to test the hypothesis that incipient ecological speciation is a result of divergence linked to the thermal environment. We identified temperature-associated gene regions in a coastal fish species that is spatially homogeneous throughout several temperature-defined biogeographic regions based on selectively neutral markers. Based on these gene regions, the species is divided into geographically distinct regional populations. Importantly, the ranges of these populations are delimited by the same ecological boundaries that define distinct infraspecific genetic lineages in co-distributed marine species, and biogeographic disjunctions in species assemblages. Our results indicate that temperature-mediated selection represents an early stage of marine ecological speciation in coastal regions that lack physical dispersal barriers.
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Affiliation(s)
- Peter R. Teske
- Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2006, South Africa
| | - Jonathan Sandoval-Castillo
- Molecular Ecology Lab, College of Science and Engineering, Flinders University, Adelaide 5001, Australia
| | - Tirupathi Rao Golla
- Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2006, South Africa
| | - Arsalan Emami-Khoyi
- Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2006, South Africa
| | - Mbaye Tine
- Centre for Ecological Genomics and Wildlife Conservation, Department of Zoology, University of Johannesburg, Auckland Park 2006, South Africa
| | - Sophie von der Heyden
- Evolutionary Genomics Lab, Department of Botany and Zoology, Stellenbosch University, Matieland 7602, South Africa
| | - Luciano B. Beheregaray
- Molecular Ecology Lab, College of Science and Engineering, Flinders University, Adelaide 5001, Australia
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46
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Graham AM, Barreto FS. Novel microRNAs are associated with population divergence in transcriptional response to thermal stress in an intertidal copepod. Mol Ecol 2018; 28:584-599. [PMID: 30548575 DOI: 10.1111/mec.14973] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Revised: 11/09/2018] [Accepted: 11/13/2018] [Indexed: 12/29/2022]
Abstract
The role of gene expression in adaptation to differing thermal environments has been assayed extensively. Yet, in most natural systems, analyses of gene expression reveal only one level of the complexity of regulatory machineries. MicroRNAs (miRNAs) are small noncoding RNAs which are key components of many gene regulatory networks, and they play important roles in a variety of cellular pathways by modulating post-transcriptional quantities of mRNA available for protein synthesis. The characterization of miRNA loci and their regulatory dynamics in nonmodel systems are still largely understudied. In this study, we examine the role of miRNAs in response to high thermal stress in the intertidal copepod Tigriopus californicus. Allopatric populations of this species show varying levels of local adaptation with respect to thermal regimes, and previous studies showed divergence in gene expression between populations from very different thermal environments. We examined the transcriptional response to temperature stress in two populations separated by only 8 km by utilizing RNA-seq to quantify both mRNA and miRNA levels. Using the currently available genome sequence, we first describe the repertoire of miRNAs in T. californicus and assess the degree to which transcriptional response to temperature stress is governed by miRNA activity. The two populations showed large differences in the number of genes involved, the magnitude of change in commonly used genes and in the number of miRNAs involved in transcriptional modulation during stress. Our results suggest that an increased level of regulatory network complexity may underlie improved survivorship under thermal stress in one of the populations.
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Affiliation(s)
- Allie M Graham
- Department of Integrative Biology, Oregon State University, Corvallis, Oregon
| | - Felipe S Barreto
- Department of Integrative Biology, Oregon State University, Corvallis, Oregon
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47
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Paraskevopoulou S, Tiedemann R, Weithoff G. Differential response to heat stress among evolutionary lineages of an aquatic invertebrate species complex. Biol Lett 2018; 14:rsbl.2018.0498. [PMID: 30487258 DOI: 10.1098/rsbl.2018.0498] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2018] [Accepted: 10/31/2018] [Indexed: 11/12/2022] Open
Abstract
Under global warming scenarios, rising temperatures can constitute heat stress to which species may respond differentially. Within a described species, knowledge on cryptic diversity is of further relevance, as different lineages/cryptic species may respond differentially to environmental change. The Brachionus calyciflorus species complex (Rotifera), which was recently described using integrative taxonomy, is an essential component of aquatic ecosystems. Here, we tested the hypothesis that these (formerly cryptic) species differ in their heat tolerance. We assigned 47 clones with nuclear ITS1 (nuITS1) and mitochondrial COI (mtCOI) markers to evolutionary lineages, now named B. calyciflorus sensu stricto (s.s.) and B. fernandoi We selected 15 representative clones and assessed their heat tolerance as a bi-dimensional phenotypic trait affected by both the intensity and duration of heat stress. We found two distinct groups, with B. calyciflorus s.s. clones having higher heat tolerance than the novel species B. fernandoi This apparent temperature specialization among former cryptic species underscores the necessity of a sound species delimitation and assignment, when organismal responses to environmental changes are investigated.
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Affiliation(s)
- Sofia Paraskevopoulou
- Institute of Biochemistry and Biology, Unit of Evolutionary Biology and Systematic Zoology, University of Potsdam, D-14476 Potsdam, Germany .,Institute of Biochemistry and Biology, Unit of Ecology and Ecosystem Modelling, University of Potsdam, D-14469 Potsdam, Germany
| | - Ralph Tiedemann
- Institute of Biochemistry and Biology, Unit of Evolutionary Biology and Systematic Zoology, University of Potsdam, D-14476 Potsdam, Germany
| | - Guntram Weithoff
- Institute of Biochemistry and Biology, Unit of Ecology and Ecosystem Modelling, University of Potsdam, D-14469 Potsdam, Germany.,Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Altensteinstr. 6, 14195 Berlin, Germany
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48
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Thompson KA, Rieseberg LH, Schluter D. Speciation and the City. Trends Ecol Evol 2018; 33:815-826. [DOI: 10.1016/j.tree.2018.08.007] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2017] [Revised: 08/18/2018] [Accepted: 08/22/2018] [Indexed: 12/30/2022]
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49
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Fincke OM, Xu M, Khazan ES, Wilson M, Ware JL. Tests of hypotheses for morphological and genetic divergence in Megaloprepus damselflies across Neotropical forests. Biol J Linn Soc Lond 2018. [DOI: 10.1093/biolinnean/bly148] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Ola M Fincke
- Department of Biology, University of Oklahoma, Norman, OK, USA
| | - Mingzi Xu
- Department of Biology, University of Oklahoma, Norman, OK, USA
| | - Emily S Khazan
- Department of Biology, University of Oklahoma, Norman, OK, USA
| | - Megan Wilson
- Department of Biological Sciences, Rutgers University, Newark, NJ, USA
| | - Jessica L Ware
- Department of Biological Sciences, Rutgers University, Newark, NJ, USA
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Distribution of Canthon rutilans rutilans and Canthon rutilans cyanescens Along Spatio-Temporal and Temperature Gradients. INSECTS 2018; 9:insects9040124. [PMID: 30248894 PMCID: PMC6316853 DOI: 10.3390/insects9040124] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Revised: 09/05/2018] [Accepted: 09/18/2018] [Indexed: 11/17/2022]
Abstract
Subspecies is a debated taxonomic rank that, in some cases, could indicate that a speciation process is taking place. Studying the degree of co-occurrence among subspecies along environmental gradients may help to determine its taxonomic status. In this study, we explore the distribution of two subspecies of Canthon rutilans along spatio-temporal and temperature gradients in the Atlantic Forest of southern Brazil in order to reinforce their current subspecies status or to support their consideration as two different species. A yearly survey conducted along an elevational transect (from 250 m to 1630 m) shows that there is no spatio-temporal overlap between the two taxa. We collected 899 individuals of Canthon rutilans cyanescens and 29 individuals of Canthon rutilans rutilans. C. rutilans cyanescens can be found at 250 m (all year except in June), 430 m (August to April), and 840 m (September to April) in elevation, and when the air temperature oscillates from 15.3 °C to 24.0 °C. C. rutilans rutilans can be found at 1360 m (October to February), 1630 m (January) in elevation, and when the air temperature oscillates from 14.4 °C to 18.6 °C. Furthermore, local temperature data taken during the survey indicates that both subspecies also have a limited overlap in their thermal response curves. All these results suggest that these two taxa could be considered as two different species with dissimilar physiological and ecological requirements probably as a consequence of temperature-mediated divergent adaptation. Further molecular data can confirm or reject this supposition in the near future.
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