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Soong TH, Hotze C, Khandelwal NK, Tomasiak TM. Structural Basis for Oxidized Glutathione Recognition by the Yeast Cadmium Factor 1. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.31.578287. [PMID: 38352558 PMCID: PMC10862839 DOI: 10.1101/2024.01.31.578287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/24/2024]
Abstract
Transporters from the ABCC family have an essential role in detoxifying electrophilic compounds including metals, drugs, and lipids, often through conjugation with glutathione complexes. The Yeast Cadmium Factor 1 (Ycf1) transports glutathione alone as well as glutathione conjugated to toxic heavy metals including Cd2+, Hg2+, and As3+. To understand the complicated selectivity and promiscuity of heavy metal substrate binding, we determined the cryo-EM structure of Ycf1 bound to the substrate, oxidized glutathione. We systematically tested binding determinants with cellular survival assays against cadmium to determine how the substrate site accommodates different-sized metal complexes. We identify a "flex-pocket" for substrate binding that binds glutathione complexes asymmetrically and flexes to accommodate different size complexes.
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Affiliation(s)
- Tik Hang Soong
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
| | - Clare Hotze
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
| | - Nitesh Kumar Khandelwal
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
- Department of Biochemistry and Physics, University of California San Francisco, San Francisco, CA 94158, USA
| | - Thomas M Tomasiak
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, USA
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Guo J, Fu Q, Tang M, Bai J, Liu R, Zhang H, Siddique KHM, Mao H. Fulvic acid modified ZnO nanoparticles improve nanoparticle stability, mung bean growth, grain zinc content, and soil biodiversity. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 913:169840. [PMID: 38184256 DOI: 10.1016/j.scitotenv.2023.169840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 12/12/2023] [Accepted: 12/30/2023] [Indexed: 01/08/2024]
Abstract
Zinc oxide nanoparticles (ZnO NPs) have emerged as a novel solution to combat Zn deficiency in agriculture. However, challenges persist regarding their Zn utilization efficiency and environmental impact. Fulvic acid (FA), as a relatively mature modified material, is a promising candidate to enhance the environmental stability of ZnO NPs. This study investigates modifying ZnO NPs with FA to improve their stability and increase Zn content in mung bean fruit and explores their effect on plants and the soil ecosystem. We combined FA and ZnO NPs (FZ-50) at mass ratios of 1: 5, 1: 2, and 4: 5, denoted as 20 % FZ, 50 % FZ, and 80 % FZ, respectively. Initial germination tests revealed that the 50 % FZ treatment improved sprout growth and Zn content and minimized agglomeration the most. A subsequent pot experiment compared FZ-50 with ZnO, ZnO NPs, and F + Z (1: 1 FA: ZnO NPs). Notably, the FZ-50 treatment (50 % FZ applied to the soil) demonstrated superior results, exhibiting a 30.25 % increase in yield, 121 % improvement in root nodule quality, and 56.38 % increase in Zn content, with no significant changes in enzyme activities (catalase and peroxidase). Furthermore, FZ-50 increased soil available Zn content and promoted soil microorganism diversity, outperforming ZnO and ZnO NPs. This study underscores the potential of FA as a relatively mature material for modifying ZnO NPs to increase grain Zn content, presenting a novel approach to addressing Zn deficiency in agriculture.
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Affiliation(s)
- Jiao Guo
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Qian Fu
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Mengshan Tang
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Junrui Bai
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Ruiyu Liu
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Haoyue Zhang
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China
| | - Kadambot H M Siddique
- The UWA Institute of Agriculture, The University of Western Australia, Perth, WA 6001, Australia
| | - Hui Mao
- School of Resources and Environment, Northwest A&F University, Yangling, Shaanxi 712100, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, Shaanxi 712100, PR China.
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Tsushima S, Nishi Y, Suzuki R, Tachibana M, Kanaly RA, Mori JF. Formation of Biogenic Manganese Oxide Nodules on Hyphae of a New Fungal Isolate of Periconia That Immobilizes Aqueous Copper. Microbes Environ 2024; 39:ME23102. [PMID: 38866480 PMCID: PMC11220447 DOI: 10.1264/jsme2.me23102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Accepted: 04/15/2024] [Indexed: 06/14/2024] Open
Abstract
Mn(II)-oxidizing microorganisms are considered to play significant roles in the natural geochemical cycles of Mn and other heavy metals because the insoluble biogenic Mn oxides (BMOs) that are produced by these microorganisms adsorb other dissolved heavy metals and immobilize them as precipitates. In the present study, a new Mn(II)-oxidizing fungal strain belonging to the ascomycete genus Periconia, a well-studied plant-associating fungal genus with Mn(II)-oxidizing activity that has not yet been exami-ned in detail, was isolated from natural groundwater outflow sediment. This isolate, named strain TS-2, was confirmed to oxidize dissolved Mn(II) and produce insoluble BMOs that formed characteristic, separately-located nodules on their hyphae while leaving major areas of the hyphae free from encrustation. These BMO nodules also adsorbed and immobilized dissolved Cu(II), a model analyte of heavy metals, as evidenced by elemental mapping ana-lyses of fungal hyphae-BMO assemblages using a scanning electron microscope with energy-dispersive X-ray spectroscopy (SEM-EDX). Analyses of functional genes within the whole genome of strain TS-2 further revealed the presence of multiple genes predicted to encode laccases/multicopper oxidases that were potentially responsible for Mn(II) oxidation by this strain. The formation of BMO nodules may have functioned to prevent the complete encrustation of fungal hyphae, thereby enabling the control of heavy metal concentrations in their local microenvironments while maintaining hyphal functionality. The present results will expand our knowledge of the physiological and morphological traits of Mn(II)-oxidizing Periconia, which may affect the natural cycle of heavy metals through their immobilization.
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Affiliation(s)
- Shihori Tsushima
- Graduate School of Nanobioscience, Yokohama City University, Japan
| | - Yuma Nishi
- Graduate School of Nanobioscience, Yokohama City University, Japan
| | - Ryo Suzuki
- Graduate School of Nanobioscience, Yokohama City University, Japan
| | - Masaru Tachibana
- Graduate School of Nanobioscience, Yokohama City University, Japan
| | - Robert A. Kanaly
- Graduate School of Nanobioscience, Yokohama City University, Japan
| | - Jiro F. Mori
- Graduate School of Nanobioscience, Yokohama City University, Japan
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de Almeida TT, Tschoeke BAP, Quecine MC, Tezzoto T, Gaziola SA, Azevedo RA, Piotto FA, Orlandelli RC, Dourado MN, Azevedo JL. Mechanisms of Mucor sp. CM3 isolated from the aquatic macrophyte Eichhornia crassipes (Mart.) Solms to increase cadmium bioremediation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:93846-93861. [PMID: 37523087 DOI: 10.1007/s11356-023-29003-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Accepted: 07/22/2023] [Indexed: 08/01/2023]
Abstract
Bioremediation of toxic metals is a feasible and low-cost remediation tool to reduce metal contamination. Plant-fungus interactions can improve this technique. Eichhornia crassipes (Mart.) Solms is a macrophyte reported to bioremediate contaminated water. Thus, the present study aimed to isolate endophytic fungi from E. crassipes, select a highly cadmium (Cd) tolerant isolate and evaluate its bioremediation potential. This was evaluated by (1) the fungus tolerance and capacity to accumulate Cd; (2) Cd effects on cell morphology (using SEM and TEM) and on the fungal antioxidant defense system, as well as (3) the effect on model plant Solanum lycopersicum L. cultivar Calabash Rouge, inoculated with the endophyte fungus and exposed to Cd. Our results selected the endophyte Mucor sp. CM3, which was able to tolerate up to 1000 g/L of Cd and to accumulate 900 mg of Cd/g of biomass. Significant changes in Mucor sp. CM3 morphology were observed when exposed to high Cd concentrations, retaining this metal both in its cytoplasm and in its cell wall, which may be linked to detoxification and metal sequestration mechanisms related to the formation of Cd-GSH complexes. In addition, Cd stress induced the activation of all tested antioxidant enzymes - superoxide dismutase (SOD), catalase (CAT), and glutathione reductase (GR) - in this endophytic fungus. Moreover, when inoculated in tomato plants, this fungus promoted plant growth (in treatments without Cd) and induced an increased metal translocation to plant shoot, showing its potential to increase metal bioremediation. Therefore, this study indicates that the isolated endophyte Mucor sp. CM3 can be applied as a tool in different plant conditions, improving plant bioremediation and reducing the environmental damage caused by Cd, while also promoting plant growth in the absence of contaminants.
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Affiliation(s)
- Tiago Tognolli de Almeida
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Av. Centenário, 303 - São Dimas, Piracicaba, SP, 13400-970, Brazil.
- Stricto Sensu Postgraduate Program in Environmental Sciences and Agricultural Sustainability, Dom Bosco Catholic University (UCDB), Av. Tamandaré, 6000 - Jardim Seminário, Campo Grande, MS, 79117-900, Brazil.
| | - Bruno Augusto Prohmann Tschoeke
- Department of Genetics, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
| | - Maria Carolina Quecine
- Department of Genetics, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
| | - Tiago Tezzoto
- Plant Production Department, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
| | - Salete Aparecida Gaziola
- Department of Genetics, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
| | - Ricardo Antunes Azevedo
- Department of Genetics, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
| | - Fernando Angelo Piotto
- Department of Genetics, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
| | - Ravely Casarotti Orlandelli
- Department of Biotechnology, Genetics and Cell Biology, State University of Maringá (UEM), Av. Colombo, 5790, Bloco H67, Maringá, PR, 87020-900, Brazil
| | - Manuella Nóbrega Dourado
- Postgraduate Program in Technological and Environmental Processes, University of Sorocaba (UNISO), Rod. Raposo Tavares, Km 92,5 - Vila Artura, Sorocaba, SP, 18023-000, Brazil
| | - João Lucio Azevedo
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Av. Centenário, 303 - São Dimas, Piracicaba, SP, 13400-970, Brazil
- Department of Genetics, Superior School of Agriculture'Luiz de Queiroz', University of São Paulo (USP), Av. Pádua Dias, 11 - Agronomia, Piracicaba, SP, 13418-260, Brazil
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Zsigmond AR, Fejér I, Kántor I, May Z, Urák I. Influence of the urban environment on four mushroom species in the light of their elemental composition. CHEMOSPHERE 2023:139052. [PMID: 37245597 DOI: 10.1016/j.chemosphere.2023.139052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Revised: 05/23/2023] [Accepted: 05/26/2023] [Indexed: 05/30/2023]
Abstract
The mushrooms are living organisms with excellent capability to adapt to the multiple challenges of their environment. Several species are well represented in urban green areas (parks, green spots, and recreation grounds). We investigated the influence of the urban environment over two saprotrophic (Bovista plumbea, Lycoperdon perlatum) and two mycorrhizal (Amanita rubescens, Suillus granulatus) species commonly present in urban parks of Cluj-Napoca, a major city of Romania. Three control sites close to the city were chosen. We determined 19 elements (Ag, Al, Ba, Ca, Cd, Cr, Cu, Fe, K, Mg, Mn, Na, Ni, P, S, Si, Sr, Ti, and Zn) in the fruiting bodies of mushrooms and in soils by ICP OES technique. S. granulatus was the most sensible species to the urban pollution; this species accumulated 130 and 4.40 mg kg-1 (dry weight) median concentrations of Al and Ni, respectively. The highest concentration of Ag, Cu and Fe was determined in B. plumbea (3.18, 83.7 and 141 mg kg-1, respectively) and L. perlatum (4.68, 91.0 and 125 kg-1, respectively) collected from the city. The saprotrophic species contained appreciably higher concentrations of Ag, Cu, Fe, Mg, P, and S than the mycorrhizal ones. Common feature of all four species was the higher Ag and Sr concentrations in the fruiting bodies of urban origin. Our results suggest that the unique defence mechanisms of the species might have higher impact over the elemental profile of the mushrooms than the soil properties. We propose L. perlatum and S. granulatus as suitable indicator species of the urban pollution with regard to inorganic pollutants.
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Affiliation(s)
- Andreea R Zsigmond
- Department of Environmental Science, Sapientia Hungarian University of Transylvania, Calea Turzii 4, 400193, Cluj-Napoca, Romania.
| | - Ingrid Fejér
- Department of Environmental Science, Sapientia Hungarian University of Transylvania, Calea Turzii 4, 400193, Cluj-Napoca, Romania
| | - Izolda Kántor
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Magyar Tudósok Krt. 2, H-1117, Budapest, Hungary
| | - Zoltán May
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Magyar Tudósok Krt. 2, H-1117, Budapest, Hungary
| | - István Urák
- Department of Environmental Science, Sapientia Hungarian University of Transylvania, Calea Turzii 4, 400193, Cluj-Napoca, Romania
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Quan L, Shi L, Zhang S, Yao Q, Yang Q, Zhu Y, Liu Y, Lian C, Chen Y, Shen Z, Duan K, Xia Y. Ectomycorrhizal fungi, two species of Laccaria, differentially block the migration and accumulation of cadmium and copper in Pinus densiflora. CHEMOSPHERE 2023; 334:138857. [PMID: 37187383 DOI: 10.1016/j.chemosphere.2023.138857] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 04/09/2023] [Accepted: 05/04/2023] [Indexed: 05/17/2023]
Abstract
The root tips of host plant species can establish ectomycorrhizae with their fungal partners, thereby altering the responses of the host plants to heavy metal (HM) toxicity. Here, two species of Laccaria, L. bicolor and L. japonica, were investigated in symbiosis with Pinus densiflora to study their potential for promotion of phytoremediation of HM-contaminated soils in pot experiments. The results showed that L. japonica had significantly higher dry biomass than L. bicolor in mycelia grown on modified Melin-Norkrans medium containing elevated levels of cadmium (Cd) or copper (Cu). Meanwhile, the accumulations of Cd or Cu in L. bicolor mycelia were much higher than that in L. japonica at the same level of Cd or Cu. Therefore, L. japonica displayed a stronger tolerance to HM toxicity than L. bicolor in situ. Compared with non-mycorrhizal P. densiflora seedlings, inoculation with two Laccaria species significantly increased the growth of P. densiflora seedlings in absence or presence of HM. The mantle of host roots blocked the uptake and migration of HM, which led to the decrease of Cd and Cu accumulation in the P. densiflora shoots and roots, except for the root Cd accumulation of L. bicolor-mycorrhizal plants when 25 mg kg-1 Cd exposure. Furthermore, HM distribution in mycelia showed Cd and Cu are mainly retained in the cell walls of mycelia. These results provide strong evidence that the two species of Laccaria in this system may have different strategies to assist host tree against HM toxicity.
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Affiliation(s)
- Lingtong Quan
- College of Life Sciences, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agricultural University, Nanjing, 210095, China
| | - Liang Shi
- College of Life Sciences, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agricultural University, Nanjing, 210095, China
| | - Shijie Zhang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing, 210014, China
| | - Qian Yao
- China Tobacco Henan Industrial Co., Ltd, Zhengzhou, 450000, China
| | - Qi Yang
- China Tobacco Henan Industrial Co., Ltd, Zhengzhou, 450000, China
| | - Yongwei Zhu
- College of Life Sciences, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yanli Liu
- Jinpu Landscape Architecture Limited Company, Nanjing, 211100, China
| | - Chunlan Lian
- Asian Research Center for Bioresource and Environmental Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Midori-cho, Nishitokyo, Tokyo, 188-0002, Japan
| | - Yahua Chen
- College of Life Sciences, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agricultural University, Nanjing, 210095, China
| | - Zhenguo Shen
- College of Life Sciences, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agricultural University, Nanjing, 210095, China.
| | - Kun Duan
- China Tobacco Henan Industrial Co., Ltd, Zhengzhou, 450000, China.
| | - Yan Xia
- College of Life Sciences, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agricultural University, Nanjing, 210095, China.
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Chandwani S, Kayasth R, Naik H, Amaresan N. Current status and future prospect of managing lead (Pb) stress through microbes for sustainable agriculture. ENVIRONMENTAL MONITORING AND ASSESSMENT 2023; 195:479. [PMID: 36930330 DOI: 10.1007/s10661-023-11061-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 02/25/2023] [Indexed: 06/18/2023]
Abstract
Soil is an important residence under various biotic and abiotic conditions. Contamination of soil by various means has hazardous effects on both plants and humans. Soil contamination by heavy metals occurs due to various man-made activities, including improper industrial and agricultural practices. Among the heavy metals, after arsenic, lead (Pb) was found to be the second most toxic metal and potent pollutants that accumulate in sediments and soils. Pb is not considered an essential element for promoting plant growth but is readily absorbed and accumulated in different plant parts. Many parameters such as pH, root exudation, soil particle size, cation exchange capacity, and other physicochemical parameters are involved in Pb uptake in plants. Excess amounts of Pb pose a threat to plant growth and cause toxicity such as chlorosis, blackening of the root system, and stunted growth. Pb toxicity may inhibit photosynthesis, disturb water balance and mineral nutrition, and alter the hormonal status, structure, and membrane permeability of plants. Therefore, this review addresses the effects of Pb toxicity and its impact on plant growth, including the morphological, physiological, and biological effects of Pb toxicity, the mechanisms behind different strategies promoting plant growth, and in combating Pb-induced stress. The bioremediation strategy for Pb removal from Pb-contaminated soil also plays an important role in combating Pb toxicity using bacterial community. Pb-contaminated soil may be remediated using different technologies such as rhizofiltration and phytoremediation, which tend to have a great capacity to curb Pb-contamination within the soil.
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Affiliation(s)
- Sapna Chandwani
- C.G. Bhakta Institute of Biotechnology, Uka Tarsadia University, Maliba Campus, Bardoli Surat, 394 350, Gujarat, India
| | - Rinkal Kayasth
- C.G. Bhakta Institute of Biotechnology, Uka Tarsadia University, Maliba Campus, Bardoli Surat, 394 350, Gujarat, India
| | - Hetvi Naik
- C.G. Bhakta Institute of Biotechnology, Uka Tarsadia University, Maliba Campus, Bardoli Surat, 394 350, Gujarat, India
| | - Natarajan Amaresan
- C.G. Bhakta Institute of Biotechnology, Uka Tarsadia University, Maliba Campus, Bardoli Surat, 394 350, Gujarat, India.
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Greeshma K, Kim HS, Ramanan R. The emerging potential of natural and synthetic algae-based microbiomes for heavy metal removal and recovery from wastewaters. ENVIRONMENTAL RESEARCH 2022; 215:114238. [PMID: 36108721 DOI: 10.1016/j.envres.2022.114238] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Revised: 08/20/2022] [Accepted: 08/27/2022] [Indexed: 06/15/2023]
Abstract
Heavy Metal (HM) bioremoval by microbes is a successful, environment-friendly technique, particularly at low concentrations of HMs. Studies using algae, bacteria, and fungi reveal promising capabilities in isolation and when used in consortia. Yet, few reviews have emphasized individual and collective HM removal rates and the associated mechanisms in natural or synthetic microbiomes. Besides discussing the limitations of conventional and synthetic biology approaches, this review underscores the utility of indigenous microbial taxon, i.e., algae, fungi, and bacteria, in HM removal with adsorption capacities and their synergistic role in microbiome-led studies. The detoxification mechanisms studied for certain HMs indicate distinctive removal pathways in each taxon which points to an enhanced effect when used as a microbiome. The role and higher efficacies of the designer microbiomes with complementing and mutualistic taxa are also considered, followed by recovery options for a circular bioeconomy. The citation network analysis further validates the multi-metal removal ability of microbiomes and the restricted capabilities of the individual counterparts. In precis, the study reemphasizes increased metal removal efficiencies of inter-taxon microbiomes and the mechanisms for synergistic and improved removal, eventually drawing attention to the benefits of ecological engineering approaches compared to other alternatives.
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Affiliation(s)
- Kozhumal Greeshma
- Sustainable Resources Laboratory, Department of Environmental Science, Central University of Kerala, Tejaswini Hills, Periya, Kasaragod, Kerala, 671 316, India
| | - Hee-Sik Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon, 34141, Republic of Korea; Department of Environmental Biotechnology, KRIBB School of Biotechnology, Korea University of Science and Technology (UST), 34113, Daejeon, Republic of Korea
| | - Rishiram Ramanan
- Sustainable Resources Laboratory, Department of Environmental Science, Central University of Kerala, Tejaswini Hills, Periya, Kasaragod, Kerala, 671 316, India; Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Yuseong-gu, Daejeon, 34141, Republic of Korea.
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Dusengemungu L, Gwanama C, Simuchimba G, Mubemba B. Potential of bioaugmentation of heavy metal contaminated soils in the Zambian Copperbelt using autochthonous filamentous fungi. Front Microbiol 2022; 13:1045671. [PMID: 36532421 PMCID: PMC9752026 DOI: 10.3389/fmicb.2022.1045671] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 10/21/2022] [Indexed: 11/07/2023] Open
Abstract
There is great potential to remediate heavy metal contaminated environments through bioaugmentation with filamentous fungi. However, these fungi have been poorly investigated in most developing countries, such as Zambia. Therefore, the present study aimed at isolating indigenous filamentous fungi from heavy metal contaminated soil and to explore their potential for use in bioaugmentation. The conventional streak plate method was used to isolate fungi from heavy metal-contaminated soil. Filamentous fungal isolates were identified using morphological and molecular techniques. The radial growth diameter technique was used to evaluate heavy metal tolerance of the fungi. The most abundant and highly tolerant fungi, identified as Aspergillus transmontanensis, Cladosporium cladosporioides, and Geotrichum candidum species, were used to bioremediate heavy metal contaminated soil samples with uncontaminated soil sample being employed as a control. A maximum tolerance index (TI) between 0.7 and 11.0 was observed for A. transmontanensis, and G. candidum while C. cladosporioides displayed the TI between 0.2 and 1.2 in the presence of 1,000 ppm of Cu, Co, Fe, Mn, and Zn. The interspecific interaction was analyzed to determine the compatibility among isolates. Our results showed mutual intermingling between the three evaluated fungal species, which confirms their common influence in biomineralization of heavy metals in contaminated soils. Maximum bio-removal capacities after 90 days were 72% for Cu, 99.8% for Co, 60.6% for Fe, 82.2% for Mn, and 100% for both Pb and Zn. This study has demonstrated the potential of highly resistant autochthonous fungal isolates to remediate the heavy metal contamination problem.
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Affiliation(s)
- Leonce Dusengemungu
- School of Mathematics and Natural Sciences, The Copperbelt University, Kitwe, Zambia
- Africa Centre of Excellence for Sustainable Mining, The Copperbelt University, Kitwe, Zambia
| | - Cousins Gwanama
- School of Natural Resources, The Copperbelt University, Kitwe, Zambia
| | - Grant Simuchimba
- School of Natural Resources, The Copperbelt University, Kitwe, Zambia
| | - Benjamin Mubemba
- School of Natural Resources, The Copperbelt University, Kitwe, Zambia
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Gupta A, Dubey P, Kumar M, Roy A, Sharma D, Khan MM, Bajpai AB, Shukla RP, Pathak N, Hasanuzzaman M. Consequences of Arsenic Contamination on Plants and Mycoremediation-Mediated Arsenic Stress Tolerance for Sustainable Agriculture. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11233220. [PMID: 36501260 PMCID: PMC9735799 DOI: 10.3390/plants11233220] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Revised: 11/10/2022] [Accepted: 11/22/2022] [Indexed: 05/13/2023]
Abstract
Arsenic contamination in water and soil is becoming a severe problem. It is toxic to the environment and human health. It is usually found in small quantities in rock, soil, air, and water which increase due to natural and anthropogenic activities. Arsenic exposure leads to several diseases such as vascular disease, including stroke, ischemic heart disease, and peripheral vascular disease, and also increases the risk of liver, lungs, kidneys, and bladder tumors. Arsenic leads to oxidative stress that causes an imbalance in the redox system. Mycoremediation approaches can potentially reduce the As level near the contaminated sites and are procuring popularity as being eco-friendly and cost-effective. Many fungi have specific metal-binding metallothionein proteins, which are used for immobilizing the As concentration from the soil, thereby removing the accumulated As in crops. Some fungi also have other mechanisms to reduce the As contamination, such as biosynthesis of glutathione, cell surface precipitation, bioaugmentation, biostimulation, biosorption, bioaccumulation, biovolatilization, methylation, and chelation of As. Arsenic-resistant fungi and recombinant yeast have a significant potential for better elimination of As from contaminated areas. This review discusses the relationship between As exposure, oxidative stress, and signaling pathways. We also explain how to overcome the detrimental effects of As contamination through mycoremediation, unraveling the mechanism of As-induced toxicity.
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Affiliation(s)
- Anmol Gupta
- IIRC-3, Plant-Microbe Interaction and Molecular Immunology Laboratory, Department of Biosciences, Faculty of Science, Integral University, Lucknow 226026, Uttar Pradesh, India
| | - Priya Dubey
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India
| | - Manoj Kumar
- Institute of Plant Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion 7505101, Israel
- Correspondence: (M.K.); (M.H.)
| | - Aditi Roy
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India
| | - Deeksha Sharma
- Plant Molecular Biology Laboratory, CSIR National Botanical Research Institute, Lucknow 226001, Uttar Pradesh, India
| | - Mohammad Mustufa Khan
- Department of Basic Medical Sciences, Integral Institute of Allied Health Sciences & Research (IIAHS&R), Integral University, Lucknow 226026, Uttar Pradesh, India
| | - Atal Bihari Bajpai
- Department of Botany, D.B.S. (PG) College, Dehradun 248001, Uttarakhand, India
| | | | - Neelam Pathak
- Department of Biochemistry, Dr. Rammanohar Lohia Avadh University, Ayodhya 224001, Uttar Pradesh, India
| | - Mirza Hasanuzzaman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh
- Correspondence: (M.K.); (M.H.)
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Mycosynthesis of Metal-Containing Nanoparticles-Fungal Metal Resistance and Mechanisms of Synthesis. Int J Mol Sci 2022; 23:ijms232214084. [PMID: 36430561 PMCID: PMC9696665 DOI: 10.3390/ijms232214084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 11/08/2022] [Accepted: 11/11/2022] [Indexed: 11/17/2022] Open
Abstract
In the 21st century, nanomaterials play an increasingly important role in our lives with applications in many sectors, including agriculture, biomedicine, and biosensors. Over the last two decades, extensive research has been conducted to find ways to synthesise nanoparticles (NPs) via mediation with fungi or fungal extracts. Mycosynthesis can potentially be an energy-efficient, highly adjustable, environmentally benign alternative to conventional physico-chemical procedures. This review investigates the role of metal toxicity in fungi on cell growth and biochemical levels, and how their strategies of resistance, i.e., metal chelation, biomineral formation, biosorption, bioaccumulation, compartmentalisation, and efflux of metals from cells, contribute to the synthesis of metal-containing NPs used in different applications, e.g., biomedical, antimicrobial, catalytic, biosensing, and precision agriculture. The role of different synthesis conditions, including that of fungal biomolecules serving as nucleation centres or templates for NP synthesis, reducing agents, or capping agents in the synthesis process, is also discussed. The authors believe that future studies need to focus on the mechanism of NP synthesis, as well as on the influence of such conditions as pH, temperature, biomass, the concentration of the precursors, and volume of the fungal extracts on the efficiency of the mycosynthesis of NPs.
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12
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Ciadamidaro L, Pfendler S, Girardclos O, Zappelini C, Binet P, Bert V, Khasa D, Blaudez D, Chalot M. Mycorrhizal inoculation effects on growth and the mycobiome of poplar on two phytomanaged sites after 7-year-short rotation coppicing. FRONTIERS IN PLANT SCIENCE 2022; 13:993301. [PMID: 36388565 PMCID: PMC9650387 DOI: 10.3389/fpls.2022.993301] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 10/05/2022] [Indexed: 06/16/2023]
Abstract
AIMS Afforestation of trace-element contaminated soils, notably with fast growing trees, has been demonstrated to be an attractive option for bioremediation due to the lower costs and dispersion of contaminants than conventional cleanup methods. Mycorrhizal fungi form symbiotic associations with plants, contributing to their tolerance towards toxic elements and actively participating to the biorestoration processes. The aim of this study was to deepen our understanding on the effects of mycorrhizal inoculation on plant development and fungal community at two trace-element contaminated sites (Pierrelaye and Fresnes-sur-Escaut, France) planted with poplar (Populus trichocarpa x Populus maximowiczii). METHODS The 2 sites were divided into 4 replicated field blocks with a final plant density of 2200 tree h-1. Half of the trees were inoculated with a commercial inoculum made of a mix of mycorrhizal species. The sites presented different physico-chemical characteristics (e.g., texture: sandy soil versus silty-loam soil and organic matter: 5.7% versus 3.4% for Pierrelaye and Fresnes-sur-Escaut, respectively) and various trace element contamination levels. RESULTS After 7 years of plantation, inoculation showed a significant positive effect on poplar biomass production at the two sites. Fungal composition study demonstrated a predominance of the phylum Ascomycota at both sites, with a dominance of Geopora Arenicola and Mortierella elongata, and a higher proportion of ectomycorrhizal and endophytic fungi (with the highest values observed in Fresnes-sur-Escaut: 45% and 28% for ECM and endophytic fungi, respectively), well known for their capacity to have positive effects on plant development in stressful conditions. Furthermore, Pierrelaye site showed higher frequency (%) of mycorrhizal tips for ectomycorrhizal fungi (ECM) and higher intensity (%) of mycorrhizal root cortex colonization for arbuscular mycorrhizal fungi (AMF) than Fresnes-sur-Escaut site, which translates in a higher level of diversity. CONCLUSIONS Finally, this study demonstrated that this biofertilization approach could be recommended as an appropriate phytomanagement strategy, due to its capacity to significantly improve poplar productivity without any perturbations in soil mycobiomes.
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Affiliation(s)
- Lisa Ciadamidaro
- Chrono-environnement UMR6249, CNRS, Université Bourgogne Franche-Comté, Besançon, France
| | - Stéphane Pfendler
- Laboratoire Chrono-environnement UMR6249, CNRS, Université Bourgogne Franche-Comté, Besançon, France
| | - Olivier Girardclos
- Laboratoire Chrono-environnement UMR6249, CNRS, Université Bourgogne Franche-Comté, Besançon, France
| | - Cyril Zappelini
- Agroécologie, INRAE, Institut Agro, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, Dijon, France
| | - Philippe Binet
- Laboratoire Chrono-environnement UMR6249, CNRS, Université Bourgogne Franche-Comté, Besançon, France
| | - Valerie Bert
- INERIS, Clean Technologies and Circular Economy Unit, SIT, Parc Technologique Alata, BP2, Verneuil-en- Halatte, France
| | - Damase Khasa
- Centre for Forest Research and Institute for Systems and Integrative Biology, Université Laval, Québec, QC, Canada
| | | | - Michel Chalot
- Laboratoire Chrono-environnement UMR6249, CNRS, Université Bourgogne Franche-Comté, Besançon, France
- Université de Lorraine, Faculté des Sciences et Technologies, Nancy, France
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Pang B, Yu H, Zhang J, Ye F, Wu H, Shang C. Identification of differentially expressed genes for Pseudomonas sp. Cr13 stimulated by hexavalent chromium. PLoS One 2022; 17:e0272528. [PMID: 35930609 PMCID: PMC9355187 DOI: 10.1371/journal.pone.0272528] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2021] [Accepted: 07/20/2022] [Indexed: 12/02/2022] Open
Abstract
Over exploitation of mineral resources has increasingly caused serious heavy metal contamination such as chromium (Cr). Cr(VI), the pathogenicity factor, is one of common environmental contaminants and widely known health hazards to living organisms. Therefore, it is urgent to control the polluted soil. Up to now, little is known about the regulatory mechanisms of Cr response in Pseudomonas sp. Cr13. In this study, transcriptome and differentially expressed genes in Pseudomonas sp. Cr13 strain was characterized by a comparison between Cr(VI)-treated sample and control sample using transcriptome sequencing approach. In total, 2974 genes were annotated, including 1245 (1154 down-regulated genes and 91 up-regulated genes) differentially expressed genes (DEGs). All DEGs could be assigned to 29 pathways, of which pathways related to amino acid metabolism, carbohydrate metabolism, energy metabolism and signal transduction mechanism were significantly enriched in Pseudomonas sp. Cr13. A possible mechanism for Cr toxicity response might be an active efflux which utilized a heavy metal translocating P-type ATPase to lower the intracellular Cr concentration. The down-regulated genes related to the antioxidant defense system had a key role in Cr reduction, such as SodA, Gst, osmC, BtuE, KatE, csdA and AhpC. The proteins that were visibly up-regulated, were likely to involve in alleviating Cr(VI) stress, and the significantly down-regulated genes such as MarR, Lrp, FhlA, GntR, HrcA, LysR family genes, were likely to reduce Cr(VI) induced oxidative stress. In addition, real-time quantitative PCR was used to analyze the expression patterns of some Cr responsive genes. This study reported the first identification of Cr responsive genes, and inferred the underlying regulatory mechanisms of response to Cr(VI) stress in Pseudomonas sp. Cr13.
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Affiliation(s)
- Bingbing Pang
- College of Life Science, Guangxi Normal University, Guilin, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin, China
- Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China
| | - Hongling Yu
- College of Life Science, Guangxi Normal University, Guilin, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin, China
- Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China
| | - Jin Zhang
- College of Life Science, Guangxi Normal University, Guilin, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin, China
- Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China
| | - Fengcai Ye
- College of Life Science, Guangxi Normal University, Guilin, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin, China
- Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China
| | - Haifeng Wu
- College of Life Science, Guangxi Normal University, Guilin, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin, China
- Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China
| | - Changhua Shang
- College of Life Science, Guangxi Normal University, Guilin, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, Guilin, China
- Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, Guilin, China
- * E-mail:
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14
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Shi Y, Yan T, Yuan C, Li C, Rensing C, Chen Y, Xie R, Zhang T, Lian C. Comparative Physiological and Transcriptome Analysis Provide Insights into the Response of Cenococcum geophilum, an Ectomycorrhizal Fungus to Cadmium Stress. J Fungi (Basel) 2022; 8:jof8070724. [PMID: 35887479 PMCID: PMC9323960 DOI: 10.3390/jof8070724] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 07/01/2022] [Accepted: 07/07/2022] [Indexed: 02/07/2023] Open
Abstract
Cadmium (Cd) displays strong toxicity, high mobility, and cannot be degraded, which poses a serious threat to the environment. Cenococcum geophilum (C. geophilum) is one of the most common ectomycorrhizal fungi (ECMF) in the natural environment. In this study, three Cd sensitive and three Cd tolerant strains of C. geophilum were used to analyze the physiological and molecular responses to Cd exposure. The results showed that Cd inhibited the growth of all strains of C. geophilum but had a less toxic effect on the tolerant strains, which may be correlated to a lower content of Cd and higher activity of antioxidant enzymes in the mycelia of tolerant strains. Comparative transcriptomic analysis was used to identify differentially expressed genes (DEGs) of four selected C. geophilum strains after 2 mg/L Cd treatment. The results showed that the defense response of C. geophilum strain to Cd may be closely related to the differential expression of functional genes involved in cell membrane ion transport, macromolecular compound metabolism, and redox pathways. The results were further confirmed by RT-qPCR analysis. Collectively, this study provides useful information for elucidation of the Cd tolerance mechanism of ECMF.
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Affiliation(s)
- Yuyu Shi
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (Y.S.); (T.Y.); (C.Y.)
| | - Tianyi Yan
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (Y.S.); (T.Y.); (C.Y.)
| | - Chao Yuan
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (Y.S.); (T.Y.); (C.Y.)
| | - Chaofeng Li
- Asian Research Center for Bioresource and Environmental Sciences, School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Midori-cho, Nishitokyo, Tokyo 188-0002, Japan; (C.L.); (C.L.)
| | - Christopher Rensing
- College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China;
| | - Yahua Chen
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China;
| | - Rongzhang Xie
- Forestry Bureau, Sanyuan District, Sanming 365000, China;
| | - Taoxiang Zhang
- International Joint Laboratory of Forest Symbiology, College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; (Y.S.); (T.Y.); (C.Y.)
- Correspondence: ; Tel.: +86-180-0691-1945
| | - Chunlan Lian
- Asian Research Center for Bioresource and Environmental Sciences, School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Midori-cho, Nishitokyo, Tokyo 188-0002, Japan; (C.L.); (C.L.)
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15
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Jan S, Anna C, Antonín K, Jiří Š, Jan B, Tereza L, Pavel K. Intracellular sequestration of cadmium and zinc in ectomycorrhizal fungus Amanita muscaria (Agaricales, Amanitaceae) and characterization of its metallothionein gene. Fungal Genet Biol 2022; 162:103717. [PMID: 35764233 DOI: 10.1016/j.fgb.2022.103717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 06/10/2022] [Accepted: 06/22/2022] [Indexed: 11/16/2022]
Abstract
Amanita muscaria is an ectomycorrhizal mushroom that commonly grows at metal-polluted sites. Sporocarps from the lead smelter-polluted area near Příbram (Central Bohemia, Czech Republic) showed elevated concentrations of Cd and Zn. Size exclusion chromatography of the cell extracts of the sporocarps from both polluted and unpolluted sites indicated that substantial part of intracellular Cd and Zn was sequestered in 6-kDa complexes, presumably with metallothionein(s) (MT). When the cultured mycelial isolates were compared, those from Příbram were more Cd-tolerant and accumulated slightly less Cd and Zn than those from the unpolluted site. The analysis of the available A.muscaria sequence data returned a 67-amino acid (AA) MT encoded by the AmMT1 gene. Weak Cd and Zn responsiveness of AmMT1 in the mycelia suggested its metal homeostasis function in A.muscaria, rather than a major role in detoxification. The AmMT1 belongs to a ubiquitous peptide group in the Agaricomycetes consisting of 60-70-AA MTs containing seven cysteinyl domains and a conserved histidyl, features observed also in a newly predicted, atypical 45-AA RaMT1 of the Zn-accumulator Russula bresadolae in which the C-terminal cysteinyl domains VI and VII are missing. Heterologous expression in metal-sensitive yeast mutants indicated that AmMT1 and RaMT1 encode functional peptides that can protect cells against Cd, Zn, and Cu toxicity. The metal protection phenotype observed in yeasts with mutant variants of AmMT1 and RaMT1 further indicated that the conserved histidyl seems to play a structural, not metal binding role, and the cysteinyls of the C-terminal domains VI and VII are important for Cu binding. The data provide an important insight into the metal handling of site-associated ectomycorrhizal species disturbed by excess metals and the properties of MTs common in Agaricomycetes.
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Affiliation(s)
- Sácký Jan
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Chaloupecká Anna
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Kaňa Antonín
- Department of Analytical Chemistry, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague, Czech Republic
| | - Šantrůček Jiří
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Borovička Jan
- Institute of Geology of the Czech Academy of Sciences, Rozvojová 269, 16500 Prague 6, Czech Republic; Nuclear Physics Institute of the Czech Academy of Sciences, Hlavní 130, 25068 Husinec-Řež, Czech Republic
| | - Leonhardt Tereza
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Kotrba Pavel
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic.
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16
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Borovička J, Braeuer S, Walenta M, Hršelová H, Leonhardt T, Sácký J, Kaňa A, Goessler W. A new mushroom hyperaccumulator: Cadmium and arsenic in the ectomycorrhizal basidiomycete Thelephora penicillata. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 826:154227. [PMID: 35240185 DOI: 10.1016/j.scitotenv.2022.154227] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 02/24/2022] [Accepted: 02/25/2022] [Indexed: 06/14/2023]
Abstract
Fruit-bodies of six Thelephora species (Fungi, Basidiomycota, Thelephoraceae) were analyzed for their trace element concentrations. In Thelephora penicillata, extremely high concentrations of Cd and As were found, followed by highly elevated concentrations of Cu and Zn. The highest accumulation ability was found for Cd with a mean concentration of 1.17 ± 0.37 g kg-1 (dry mass) in fruit-bodies collected from 20 unpolluted sites; the mean As concentration was 0.878 ± 0.242 g kg-1. Furthermore, striking accumulation of Se (923 ± 28 mg kg-1) was found in one sample of T. vialis and elevated concentrations of S were detected in T. palmata (19.6 ± 5.9 g kg-1). The analyzed Thelephora species were sequenced and, based on the Maximum Likelihood phylogenetic analysis (ITS rDNA) of the genus, possible other Thelephora (hyper)accumulators were predicted on the basis of their phylogenetic relationship with the discovered (hyper)accumulators. The striking ability of T. penicillata to accumulate simultaneously Cd, As, Cu, and Zn has no parallel in the Fungal Kingdom and raises the question of a biological importance of metal(loid) hyperaccumulation in mushrooms.
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Affiliation(s)
- Jan Borovička
- Institute of Geology of the Czech Academy of Sciences, Rozvojová 269, 16500 Prague 6, Czech Republic; Nuclear Physics Institute of the Czech Academy of Sciences, Hlavní 130, 25068 Husinec-Řež, Czech Republic.
| | - Simone Braeuer
- University of Graz, Institute of Chemistry, Universitätsplatz 1, 8010 Graz, Austria
| | - Martin Walenta
- University of Graz, Institute of Chemistry, Universitätsplatz 1, 8010 Graz, Austria
| | - Hana Hršelová
- Institute of Microbiology of the Czech Academy of Sciences, Vídeňská 1083, 14220 Praha 4, Czech Republic
| | - Tereza Leonhardt
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague, Czech Republic
| | - Jan Sácký
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague, Czech Republic
| | - Antonín Kaňa
- Department of Analytical Chemistry, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague, Czech Republic
| | - Walter Goessler
- University of Graz, Institute of Chemistry, Universitätsplatz 1, 8010 Graz, Austria
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17
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Naseri T, Mousavi SM. Insights into the polysaccharides and proteins production from Penicillium citrinum during bioleaching of spent coin cells. Int J Biol Macromol 2022; 209:1133-1143. [PMID: 35413324 DOI: 10.1016/j.ijbiomac.2022.04.042] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2022] [Revised: 04/04/2022] [Accepted: 04/05/2022] [Indexed: 11/15/2022]
Abstract
The essential role of polysaccharides and proteins of extracellular polymeric substances (EPS) has been well known in the bioleaching process. However, there is no information on the role of these compositions in the bioleaching of spent coin cells (SCCs). This study investigated protein and polysaccharide production as biological macromolecules during the bioleaching of SCCs at various pulp densities using adapted Penicillium citrinum. The adaptation improved the tolerance index of fungi for the bioleaching up to a pulp density of 30 g/L. The EPS analysis indicated that loosely bound EPS (LB-EPS) contained a high concentration of polysaccharides. Instead, the most protein content was concentrated at tightly bound EPS (TB-EPS). Both protein and polysaccharide keep growing up to 20 g/L of pulp density during the entire period of bioleaching, and the maximum binding rate of Mn and Li to EPS was 43% and 15%, respectively. Pearson correlation indicated the positive correlation of the protein and the polysaccharides content on bioleaching efficiencies. From the FTIR spectroscopy, the principal functional groups on Mn and Li binding were OH and carboxyl. The FE-SEM analysis revealed the deformation of EPS at 30 g/L of pulp density, which suggested the toxic effect of this pulp density.
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Affiliation(s)
- Tannaz Naseri
- Biotechnology Group, Chemical Engineering Department, Tarbiat Modares University, Tehran, Iran
| | - Seyyed Mohammad Mousavi
- Biotechnology Group, Chemical Engineering Department, Tarbiat Modares University, Tehran, Iran; Modares Environmental Research Institute, Tarbiat Modares University, Tehran, Iran.
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18
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Lalinská-Voleková B, Majerová H, Kautmanová I, Brachtýr O, Szabóová D, Arendt D, Brčeková J, Šottník P. Hydrous ferric oxides (HFO's) precipitated from contaminated waters at several abandoned Sb deposits - Interdisciplinary assessment. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 821:153248. [PMID: 35051450 DOI: 10.1016/j.scitotenv.2022.153248] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 01/14/2022] [Accepted: 01/14/2022] [Indexed: 06/14/2023]
Abstract
The presented paper represents a comprehensive analysis of ochre sediments precipitated from Fe rich drainage waters contaminated by arsenic and antimony. Ochre samples from three abandoned Sb deposits were collected in three different seasons and were characterized from the mineralogical, geochemical, and microbiological point of view. They were formed mainly by poorly crystallized 2-line ferrihydrite, with the content of arsenic in samples ranging from 7 g·kg-1 to 130 g·kg-1 and content of antimony ranging from 0.25 g·kg-1 up to 12 g·kg-1. Next-generation sequencing approach with 16S RNA, 18S RNA and ITS markers was used to characterize bacterial, fungal, algal, metazoal and protozoal communities occurring in the HFOs. In the 16S RNA, the analysis dominated bacteria (96.2%) were mainly Proteobacteria (68.8%) and Bacteroidetes (10.2%) and to less extent also Acidobacteria, Actinobacteria, Cyanobacteria, Firmicutes, Nitrosprae and Chloroflexi. Alpha and beta diversity analysis revealed that the bacterial communities of individual sites do not differ significantly, and only subtle seasonal changes were observed. In this As and Sb rich, circumneutral microenvironment, rich in iron, sulfates and carbonates, methylotrophic bacteria (Methylobacter, Methylotenera), metal/reducing bacteria (Geobacter, Rhodoferax), metal-oxidizing and denitrifying bacteria (Gallionella, Azospira, Sphingopyxis, Leptothrix and Dechloromonas), sulfur-oxidizing bacteria (Sulfuricurvum, Desulphobulbaceae) and nitrifying bacteria (Nitrospira, Nitrosospira) accounted for the most dominant ecological groups and their impact over Fe, As, Sb, sulfur and nitrogen geocycles is discussed. This study provides evidence of diverse microbial communities that exist in drainage waters and are highly important in the process of mobilization or immobilization of the potentially toxic elements.
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Affiliation(s)
| | - Hana Majerová
- Hana Majerová, Cancer Research Institute, Department of Tumor Immunology, Biomedical Research Center, Slovak Academy of Sciences, Dubravska cesta 9, 84505 Bratislava, Slovakia
| | - Ivona Kautmanová
- SNM-Natural History Museum, Vajanského náb. 2, P.O. BOX 13, 810 06 Bratislava, Slovakia
| | - Ondrej Brachtýr
- Comenius University in Bratislava, Faculty of Natural Sciences, Department of Mineralogy, Petrology and Economic Geology, Ilkovičova 6, 842 15 Bratislava, Slovakia
| | - Dana Szabóová
- SNM-Natural History Museum, Vajanského náb. 2, P.O. BOX 13, 810 06 Bratislava, Slovakia
| | - Darina Arendt
- SNM-Natural History Museum, Vajanského náb. 2, P.O. BOX 13, 810 06 Bratislava, Slovakia
| | - Jana Brčeková
- Comenius University in Bratislava, Faculty of Natural Sciences, Department of Mineralogy, Petrology and Economic Geology, Ilkovičova 6, 842 15 Bratislava, Slovakia
| | - Peter Šottník
- Comenius University in Bratislava, Faculty of Natural Sciences, Department of Mineralogy, Petrology and Economic Geology, Ilkovičova 6, 842 15 Bratislava, Slovakia
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19
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Gajewska J, Floryszak-Wieczorek J, Sobieszczuk-Nowicka E, Mattoo A, Arasimowicz-Jelonek M. Fungal and oomycete pathogens and heavy metals: an inglorious couple in the environment. IMA Fungus 2022; 13:6. [PMID: 35468869 PMCID: PMC9036806 DOI: 10.1186/s43008-022-00092-4] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2021] [Accepted: 04/07/2022] [Indexed: 01/30/2023] Open
Abstract
Heavy metal (HM) contamination of the environment is a major problem worldwide. The rate of global deposition of HMs in soil has dramatically increased over the past two centuries and there of facilitated their rapid accumulation also in living systems. Although the effects of HMs on plants, animals and humans have been extensively studied, yet little is known about their effects on the (patho)biology of the microorganisms belonging to a unique group of filamentous eukaryotic pathogens, i.e., fungi and oomycetes. Much of the literature concerning mainly model species has revealed that HM stress affects their hyphal growth, morphology, and sporulation. Toxicity at cellular level leads to disturbance of redox homeostasis manifested by the formation of nitro-oxidative intermediates and to the induction of antioxidant machinery. Despite such adverse effects, published data is indicative of the fact that fungal and oomycete pathogens have a relatively high tolerance to HMs in comparison to other groups of microbes such as bacteria. Likely, these pathogens may harbor a network of detoxification mechanisms that ensure their survival in a highly HM-polluted (micro)habitat. Such a network may include extracellular HMs immobilization, biosorption to cell wall, and/or their intracellular sequestration to proteins or other ligands. HMs may also induce a hormesis-like phenomenon allowing the pathogens to maintain or even increase fitness against chemical challenges. Different scenarios linking HMs stress and modification of the microorganisms pathogenicity are disscused in this review.
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Fortin Faubert M, Labrecque M, Hijri M. Ectomycorrhizal Fungi Dominated the Root and Rhizosphere Microbial Communities of Two Willow Cultivars Grown for Six-Years in a Mixed-Contaminated Environment. J Fungi (Basel) 2022; 8:jof8020145. [PMID: 35205899 PMCID: PMC8880157 DOI: 10.3390/jof8020145] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Revised: 01/25/2022] [Accepted: 01/28/2022] [Indexed: 02/06/2023] Open
Abstract
There is a growing interest in plant microbiome’s engineering to optimize desired functions such as improved phytoremediation. This study is aimed at examining the microbial communities inhabiting the roots and rhizospheres of two Salix miyabeana cultivars that had been grown in a short-rotation intensive culture (SRIC) system for six years in a soil contaminated with the discharge from a petrochemical factory. DNA was extracted from roots and rhizospheric soils, and fungal ITS and bacterial and archaeal 16S rDNA regions were amplified and sequenced using Illumina MiSeq technology. Cultivars ‘SX61’ and ‘SX64’ were found to harbor a similar diversity of fungal, bacterial, and archaeal amplicon sequence variants (ASVs). As expected, a greater microbial diversity was found in the rhizosphere biotope than in the roots of both cultivars, except for cultivar ‘SX64’, where a similar fungal diversity was observed in both biotopes. However, we found that microbial community structures were cultivar- and biotope-specific. Although the implication of some identified taxa for plant adaptability and biomass production capacity remains to be explored, this study provides valuable and useful information regarding microbes that could potentially favor the implantation and phytoremediation efficiency of Salix miyabeana in mixed contamination sites in similar climatic environments.
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Affiliation(s)
- Maxime Fortin Faubert
- Institut de Recherche en Biologie végétale, Département de Sciences Biologiques, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke East, Montreal, QC H1X 2B2, Canada; (M.F.F.); (M.L.)
| | - Michel Labrecque
- Institut de Recherche en Biologie végétale, Département de Sciences Biologiques, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke East, Montreal, QC H1X 2B2, Canada; (M.F.F.); (M.L.)
| | - Mohamed Hijri
- African Genome Center, Mohammed VI Polytechnic University (UM6P), Lot 660, Hay Moulay Rachid, Ben Guerir 43150, Morocco
- Correspondence:
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21
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Zhao H, Lin J, Wang X, Shi J, Dahlgren RA, Xu J. Dynamics of Soil Microbial N-Cycling Strategies in Response to Cadmium Stress. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:14305-14315. [PMID: 34617741 DOI: 10.1021/acs.est.1c04409] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Globally increasing trace metal contamination of soils requires a better mechanistic understanding of metal-stress impacts on microbially mediated nutrient cycling. Herein, a 5-month laboratory experiment was employed to assess the effects of cadmium (Cd) on soil microbial N-cycling processes and associated functional gene abundance, with and without urea amendment. In non-N-amended soils, Cd progressively stimulated microbial populations for N acquisition from initial dissolved organic N (DON) to later recalcitrant organic N. The acceleration of N catabolism was synchronously coupled with C catabolism resulting in increased CO2/N2O fluxes and adenosine triphosphate (ATP) contents. The abundance of microbes deemed inefficient in N catabolism was gradually repressed after an initial stimulation period. We posit that enhanced exergonic N processes diminished the need for endergonic activities as a survival strategy for N communities experiencing metal stress. With urea amendment, Cd exhibited an initial stimulation effect on soil nitrification and a later a promotion effect on mineralization, along with an increase in the associated microbial populations. In N-amended soils, Cd accelerated N/C transformation processes, but decreased N2O and CO2 fluxes by 19 and 14%, respectively. This implies that under eutrophic conditions, Cd synchronously altered microbial C/N metabolism from a dominance of catabolic to anabolic processes. These results infer a nutrient-based adjustment of microbial N-cycling strategies to enhance their metal resistance.
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Affiliation(s)
- Haochun Zhao
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Jiahui Lin
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Xuehua Wang
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Jiachun Shi
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Randy A Dahlgren
- Department of Land, Air and Water Resources, University of California, Davis, California 95616, United States
| | - Jianming Xu
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
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22
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Potisek M, Likar M, Vogel-Mikuš K, Arčon I, Grdadolnik J, Regvar M. 1,8-dihydroxy naphthalene (DHN) - melanin confers tolerance to cadmium in isolates of melanised dark septate endophytes. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 222:112493. [PMID: 34265529 DOI: 10.1016/j.ecoenv.2021.112493] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Revised: 06/10/2021] [Accepted: 07/03/2021] [Indexed: 05/25/2023]
Abstract
The contribution of 1,8-dihydroxy naphthalene (DHN) melanin to cadmium (Cd) tolerance in two dark septate endophytes (DSE) of the genus Cadophora with different melanin content was investigated in vitro. The DSE isolate Cad#148 with higher melanin content showed higher tolerance to Cd than the less melanised Cad#149. Melanin synthesis was significantly reduced by Cd in both isolates with uninhibited melanin synthesis, in a dose-dependent manner. Inhibition of melanin synthesis by tricyclazole reduced the relative growth of Cad#148 exposed to Cd and did not affect Cad#149. Cd accumulation was not altered by tricyclazole in the two isolates, but it increased catalase and reduced glutathione reductase activity in more melanised Cad#148, indicating higher stress levels. In contrast, in Cad#149 the enzyme activity was less affected by tricyclazole, indicating a more pronounced role of melanin-independent Cd tolerance mechanisms. Cd ligand environment in fungal mycelia was analysed by extended EXAFS (X-ray absorption fine structure). It revealed that Cd was mainly bound to O- and S-ligands, including hydroxyl, carboxyl, phosphate and thiol groups. A similar proportion of S- and O- ligands (~35% and ~65%) were found in both isolates with uninhibited melanin synthesis. Among O-ligands two types with Cd-O-C- and Cd-O-P- coordination were identified. Tricyclazole altered Cd-O- ligand environment in both fungal isolates by reducing the proportion of Cd-O-C- and increasing the proportion of Cd-O-P coordination. DHN-melanin, among other tolerance mechanisms, significantly contributes to Cd tolerance in more melanised DSE fungi by immobilising Cd to hydroxyl groups and maintaining the integrity of the fungal cell wall.
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Affiliation(s)
- Mateja Potisek
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Večna pot 111, SI-1000 Ljubljana, Slovenia.
| | - Matevž Likar
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Večna pot 111, SI-1000 Ljubljana, Slovenia
| | - Katarina Vogel-Mikuš
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Večna pot 111, SI-1000 Ljubljana, Slovenia; Jožef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia
| | - Iztok Arčon
- Jožef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia; University of Nova Gorica, Vipavska 13, POB 301, SI-5001 Nova Gorica, Slovenia
| | - Jože Grdadolnik
- National Institute of Chemistry, Hajdrihova 19, SI-1000 Ljubljana, Slovenia
| | - Marjana Regvar
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Večna pot 111, SI-1000 Ljubljana, Slovenia
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Tibbett M, Green I, Rate A, De Oliveira VH, Whitaker J. The transfer of trace metals in the soil-plant-arthropod system. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 779:146260. [PMID: 33744587 DOI: 10.1016/j.scitotenv.2021.146260] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Revised: 02/26/2021] [Accepted: 02/28/2021] [Indexed: 06/12/2023]
Abstract
Essential and non-essential trace metals are capable of causing toxicity to organisms above a threshold concentration. Extensive research has assessed the behaviour of trace metals in biological and ecological systems, but has typically focused on single organisms within a trophic level and not on multi-trophic transfer through terrestrial food chains. This reinforces the notion of metal toxicity as a closed system, failing to consider one trophic level as a pollution source to another; therefore, obscuring the full extent of ecosystem effects. Given the relatively few studies on trophic transfer of metals, this review has taken a compartment-based approach, where transfer of metals through trophic pathways is considered as a series of linked compartments (soil-plant-arthropod herbivore-arthropod predator). In particular, we consider the mechanisms by which trace metals are taken up by organisms, the forms and transformations that can occur within the organism and the consequences for trace metal availability to the next trophic level. The review focuses on four of the most prevalent metal cations in soil which are labile in terrestrial food chains: Cd, Cu, Zn and Ni. Current knowledge of the processes and mechanisms by which these metals are transformed and moved within and between trophic levels in the soil-plant-arthropod system are evaluated. We demonstrate that the key factors controlling the transfer of trace metals through the soil-plant-arthropod system are the form and location in which the metal occurs in the lower trophic level and the physiological mechanisms of each organism in regulating uptake, transformation, detoxification and transfer. The magnitude of transfer varies considerably depending on the trace metal concerned, as does its toxicity, and we conclude that biomagnification is not a general property of plant-arthropod and arthropod-arthropod systems. To deliver a more holistic assessment of ecosystem toxicity, integrated studies across ecosystem compartments are needed to identify critical pathways that can result in secondary toxicity across terrestrial food-chains.
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Affiliation(s)
- Mark Tibbett
- Department of Sustainable Land Management & Soil Research Centre, School of Agriculture Policy and Development, University of Reading, Whiteknights, RG6 6AR, UK.
| | - Iain Green
- Department of Life and Environmental Sciences, Faculty of Science and Technology, Bournemouth University, Poole, Dorset BH12 5BB, UK
| | - Andrew Rate
- School of Agriculture and Environment, The University of Western Australia, Perth, WA 6009, Australia
| | - Vinícius H De Oliveira
- Department of Plant Biology, Institute of Biology, University of Campinas, Campinas, Sao Paulo 13083-970, Brazil
| | - Jeanette Whitaker
- UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Library Avenue, Lancaster LA1 4AP, UK
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Sácký J, Černý J, Šantrůček J, Borovička J, Leonhardt T, Kotrba P. Cadmium hyperaccumulating mushroom Cystoderma carcharias has two metallothionein isoforms usable for cadmium and copper storage. Fungal Genet Biol 2021; 153:103574. [PMID: 34015433 DOI: 10.1016/j.fgb.2021.103574] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2021] [Revised: 05/05/2021] [Accepted: 05/07/2021] [Indexed: 10/21/2022]
Abstract
Cystoderma carcharias is one of the few macrofungal species that can hyperaccumulate Cd. As we have previously documented in C. carcharias collected from a smelter-polluted area, it stores 40% of Cd and nearly 90% of Cu in sporocarps in complex(es) of identical size. In this paper we examined whether metallothionein (MT) peptides that bind Cd and Cu through cysteinyl-thiolate bonds were associated with the metals in these complexes. Screening of a sporocarp cDNA expression library in yeasts allowed the identification of two transcripts, CcMT1 and CcMT2, encoding functional 34-amino acid (AA) MTs sharing 56% identity and appearing to be encoded by duplicate genes. CcMT1 conferred reasonable tolerance to Cu and a substantially higher tolerance to Cd than CcMT2, while CcMT2 clearly protected the yeasts better against Cu toxicity. While size-exclusion chromatography revealed that CcMT1 was contained in all Cd/Cu complexes isolated from wild grown sporocarps, CcMT2 was detected in a much narrower subset of the fractions. The striking difference between the CcMTs is that CcMT1 lacks the third metal-biding cysteinyl (C) within an otherwise highly conserved-in-agaricomycetes-MTs C-AA4-C-AA-C-AA3-C-AA-C-AA4-C-AA-C motif. The elimination of the corresponding cysteinyl in CcMT2 only reduced the Cu-tolerant phenotype in yeasts to the levels observed with CcMT1. Altogether, these results indicate that CcMT2 is rather adjusted to perform Cu-related tasks and point to CcMT1 as the ligand for the storage of both Cd and Cu in C.carcharias, which is the first macrofungal species in which the potential of MT in Cd handling can be seen.
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Affiliation(s)
- Jan Sácký
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic.
| | - Jiří Černý
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Jiří Šantrůček
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Jan Borovička
- Institute of Geology of the Czech Academy of Sciences, Rozvojová 269, 165 00 Prague 6, Czech Republic; Nuclear Physics Institute of the Czech Academy of Sciences, Hlavní 130, 250 68 Husinec-Řež, Czech Republic
| | - Tereza Leonhardt
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
| | - Pavel Kotrba
- Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Technická 3, 166 28 Prague 6, Czech Republic
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25
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Wang G, Zhang Q, Du W, Ai F, Yin Y, Ji R, Guo H. Microbial communities in the rhizosphere of different willow genotypes affect phytoremediation potential in Cd contaminated soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 769:145224. [PMID: 33485209 DOI: 10.1016/j.scitotenv.2021.145224] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Revised: 01/11/2021] [Accepted: 01/12/2021] [Indexed: 05/22/2023]
Abstract
Plant-associated microorganisms play an important role in controlling heavy metal uptake and accumulation in aerial parts. The microbial community and its interaction with Cd accumulation by willow were assessed to explore the association of phytoextraction efficiency and rhizospheric microbial populations. Therefore, the rhizosphere microbial compositions of three willow genotypes grown in two Cd polluted sites were investigated, focusing on their interactions with phytoremediation potential. Principal coordinate analysis revealed a significant effect of genotype on the rhizosphere microbial communities. Distinct beneficial microorganisms, such as plant growth promoting bacteria (PGPB) and mycorrhizal fungi, were assembled in the rhizosphere of different willow genotypes. Linear mixed models showed that the relative abundance of PGPB was positively associated (p < 0.01) with Cd accumulation, since these microbes significantly increased willow growth. The higher abundance of arbuscular mycorrhizal fungi in the rhizosphere of Salix × aureo-pendula CL 'J1011' at the Kejing site, showed a negative correlation with the Cd content, but a positive correlation with biomass. Conversely, mycorrhizal fungi, were more abundant in the rhizosphere of S. × jiangsuensis CL. 'J2345' and positively correlated with the Cd content in willow tissues. This study provides new insights into the distinctive microbial communities in rhizosphere of different willow genotypes, which may be consistent with the phytoremediation potential.
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Affiliation(s)
- Guobing Wang
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210046, China; Joint International Research Centre for Critical Zone Science-University of Leeds and Nanjing University, Nanjing University, Nanjing 210023, China.
| | - Qingquan Zhang
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210046, China; Joint International Research Centre for Critical Zone Science-University of Leeds and Nanjing University, Nanjing University, Nanjing 210023, China.
| | - Wenchao Du
- School of Environment, Nanjing Normal University, Nanjing 210036, China.
| | - Fuxun Ai
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210046, China; Joint International Research Centre for Critical Zone Science-University of Leeds and Nanjing University, Nanjing University, Nanjing 210023, China.
| | - Ying Yin
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210046, China; Joint International Research Centre for Critical Zone Science-University of Leeds and Nanjing University, Nanjing University, Nanjing 210023, China.
| | - Rong Ji
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210046, China; Joint International Research Centre for Critical Zone Science-University of Leeds and Nanjing University, Nanjing University, Nanjing 210023, China.
| | - Hongyan Guo
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210046, China; Joint International Research Centre for Critical Zone Science-University of Leeds and Nanjing University, Nanjing University, Nanjing 210023, China.
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26
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Urík M, Farkas B, Miglierini MB, Bujdoš M, Mitróová Z, Kim H, Matúš P. Mobilisation of hazardous elements from arsenic-rich mine drainage ochres by three Aspergillus species. JOURNAL OF HAZARDOUS MATERIALS 2021; 409:124938. [PMID: 33450513 DOI: 10.1016/j.jhazmat.2020.124938] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Revised: 12/01/2020] [Accepted: 12/21/2020] [Indexed: 06/12/2023]
Abstract
Natural ferric ochres that precipitate in streambeds at abandoned mining sites are natural scavengers of various metals and metalloids. Thus, their chemical and structural modification via microbial activity should be considered in evaluation of the risks emerging from probable spread of contamination at mining sites. Our results highlight the role of various aspergilli strains in this process via production of acidic metabolites that affect mobility and bioavailability of coprecipitated contaminants. The Mössbauer analysis revealed subtle structural changes of iron in ochres, while the elemental analysis of non-dissolved residues of ochres that were exposed to filamentous fungi suggest coinciding bioextraction of arsenic and antimony with extensive iron mobilisation. However, the zinc bioextraction by filamentous fungi is less likely dependent on iron leaching from ferric ochres. The strain specific bioextraction efficiency and subsequent bioaccumulation of mobilised metals resulted in distinct tolerance responses among the studied soil fungal strains. However, regardless the burden of bioextracted metal(loid)s on its activity, the Aspergillus niger strain has shown remarkable capability to decrease pH of its environment and, thus, bioextract significant and environmentally relevant amounts of potentially toxic elements from the natural ochres.
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Affiliation(s)
- Martin Urík
- Institute of Laboratory Research on Geomaterials, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská dolina, 84215 Bratislava, Slovakia.
| | - Bence Farkas
- Institute of Laboratory Research on Geomaterials, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská dolina, 84215 Bratislava, Slovakia
| | - Marcel B Miglierini
- Slovak University of Technology, Institute of Nuclear and Physical Engineering, Ilkovičova 3, 81219 Bratislava, Slovakia; Department of Nuclear Reactors, Faculty of Nuclear Sciences and Physical Engineering, Czech Technical University in Prague, V Holešovičkách 2, 18000 Prague, Czech Republic
| | - Marek Bujdoš
- Institute of Laboratory Research on Geomaterials, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská dolina, 84215 Bratislava, Slovakia
| | - Zuzana Mitróová
- Institute of Experimental Physics, Slovak Academy of Sciences, Watsonova 47, 04001 Košice, Slovakia
| | - Hyunjung Kim
- Department of Mineral Resources and Energy Engineering & Department of Environment and Energy, Jeonbuk National University, 567, Baekje-daero, Deokjin-gu, Jeonju, 54896 Jeonbuk, Republic of Korea
| | - Peter Matúš
- Institute of Laboratory Research on Geomaterials, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská dolina, 84215 Bratislava, Slovakia
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Pb Stress and Ectomycorrhizas: Strong Protective Proteomic Responses in Poplar Roots Inoculated with Paxillus involutus Isolate and Characterized by Low Root Colonization Intensity. Int J Mol Sci 2021; 22:ijms22094300. [PMID: 33919023 PMCID: PMC8122328 DOI: 10.3390/ijms22094300] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Revised: 04/16/2021] [Accepted: 04/18/2021] [Indexed: 01/11/2023] Open
Abstract
The commonly observed increased heavy metal tolerance of ectomycorrhized plants is usually linked with the protective role of the fungal hyphae covering colonized plant root tips. However, the molecular tolerance mechanisms in heavy metal stressed low-colonized ectormyocrrhizal plants characterized by an ectomycorrhiza-triggered increases in growth are unknown. Here, we examined Populus × canescens microcuttings inoculated with the Paxillus involutus isolate, which triggered an increase in poplar growth despite successful colonization of only 1.9% ± 0.8 of root tips. The analyzed plants, lacking a mantle—a protective fungal biofilter—were grown for 6 weeks in agar medium enriched with 0.75 mM Pb(NO3)2. In minimally colonized ‘bare’ roots, the proteome response to Pb was similar to that in noninoculated plants (e.g., higher abundances of PM- and V-type H+ ATPases and lower abundance of ribosomal proteins). However, the more intensive activation of molecular processes leading to Pb sequestration or redirection of the root metabolic flux into amino acid and Pb chelate (phenolics and citrate) biosynthesis coexisted with lower Pb uptake compared to that in controls. The molecular Pb response of inoculated roots was more intense and effective than that of noninoculated roots in poplars.
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28
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Rocha Vasconcelos da Silva G, Henrique De Oliveira V, Tibbett M. Cadmium stress causes differential effects on growth and the secretion of carbon-degrading enzymes in four mycorrhizal basidiomycetes. MYCOSCIENCE 2021; 62:132-136. [PMID: 37089253 PMCID: PMC9721516 DOI: 10.47371/mycosci.2020.12.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Revised: 12/09/2020] [Accepted: 12/09/2020] [Indexed: 11/16/2022]
Abstract
We hypothesised that cadmium exposure would hinder growth and secretion of carbon-degrading enzymes by mycorrhizal fungi, and that this would vary according to their tolerance to cadmium stress. The enzymes measured were β-Glucosidase, β-Xylosidase, β-D-cellubiosidase, N-acetyl-β-Glucosaminidase in three strains of ectomycorrhizal fungi Hebeloma subsaponaceum, Scleroderma sp., Hebeloma sp. and a feremycorrhizal fungus Austroboletus occidentalis. Fungi were subjected to cadmium stress for 28 d (in modified Melin-Norkrans liquid medium). The results showed unanticipated differential response of enzyme activities among the fungal species, including potential hormesis effects. Austroboletus occidentalis showed an increase in enzyme activity under cadmium stress.
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Affiliation(s)
- Gilka Rocha Vasconcelos da Silva
- Department of Sustainable Land Management and Soil Research Centre, School of Agriculture Policy and Development, University of Reading Earley Gate
| | | | - Mark Tibbett
- Department of Sustainable Land Management and Soil Research Centre, School of Agriculture Policy and Development, University of Reading Earley Gate
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29
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Chen C, Unrine JM, Hu Y, Guo L, Tsyusko OV, Fan Z, Liu S, Wei G. Responses of soil bacteria and fungal communities to pristine and sulfidized zinc oxide nanoparticles relative to Zn ions. JOURNAL OF HAZARDOUS MATERIALS 2021; 405:124258. [PMID: 33153791 DOI: 10.1016/j.jhazmat.2020.124258] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Revised: 10/08/2020] [Accepted: 10/09/2020] [Indexed: 06/11/2023]
Abstract
Zinc oxide nanoparticles (ZnO NPs) are attracting much interest due to their potential toxicity and ubiquity in consumer products. However, understanding of pristine and transformed ZnO NPs impact on soil microbial communities is still limited. Here, we explored changes in the microbial communities of soils treated with pristine and sulfidized ZnO NPs (s-ZnO NPs), and their corresponding Zn ions (ZnSO4) for 30 and 90 days exposures at 100 and 500 mg Zn kg-1. The similarity in bacterial community responses was observed between ZnO NPs and s-ZnO NPs, and these Zn treatments significantly affected the bacterial communities at 90 days, which exhibited distinct patterns compared to ZnSO4. The single-time tested DTPA and H2O extractable Zn ions could not fully explain the observed ZnO NPs and s-ZnO NPs impact on bacterial communities. The two most dominant phylum Nitrospirae and Actinobacteria, associated with the reduction of NH4+-N and dissolved organic carbon, demonstrated significant changes in soils exposed to ZnO NPs and s-ZnO NPs. This suggests the potential long-term impact of transformed ZnO NPs on soil carbon and nitrogen cycling. For fungal communities, we did not find the distinct response patterns of fungal communities between nanoparticulate and ionic Zn exposures.
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Affiliation(s)
- Chun Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling 712100, Shaanxi, PR China.
| | - Jason M Unrine
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546, USA
| | - Yingwei Hu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling 712100, Shaanxi, PR China
| | - Lulu Guo
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling 712100, Shaanxi, PR China
| | - Olga V Tsyusko
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546, USA
| | - Zhen Fan
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling 712100, Shaanxi, PR China
| | - Shuang Liu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling 712100, Shaanxi, PR China
| | - Gehong Wei
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Shaanxi Key Laboratory of Agricultural and Environmental Microbiology, Northwest A&F University, Yangling 712100, Shaanxi, PR China.
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Kumar V, Dwivedi SK. Mycoremediation of heavy metals: processes, mechanisms, and affecting factors. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:10375-10412. [PMID: 33410020 DOI: 10.1007/s11356-020-11491-8] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Accepted: 10/30/2020] [Indexed: 05/27/2023]
Abstract
Industrial processes and mining of coal and metal ores are generating a number of threats by polluting natural water bodies. Contamination of heavy metals (HMs) in water and soil is the most serious problem caused by industrial and mining processes and other anthropogenic activities. The available literature suggests that existing conventional technologies are costly and generated hazardous waste that necessitates disposal. So, there is a need for cheap and green approaches for the treatment of such contaminated wastewater. Bioremediation is considered a sustainable way where fungi seem to be good bioremediation agents to treat HM-polluted wastewater. Fungi have high adsorption and accumulation capacity of HMs and can be potentially utilized. The most important biomechanisms which are involved in HM tolerance and removal by fungi are bioaccumulation, bioadsorption, biosynthesis, biomineralisation, bioreduction, bio-oxidation, extracellular precipitation, intracellular precipitation, surface sorption, etc. which vary from species to species. However, the time, pH, temperature, concentration of HMs, the dose of fungal biomass, and shaking rate are the most influencing factors that affect the bioremediation of HMs and vary with characteristics of the fungi and nature of the HMs. In this review, we have discussed the application of fungi, involved tolerance and removal strategies in fungi, and factors affecting the removal of HMs.
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Affiliation(s)
- Vinay Kumar
- Department of Environmental Science, Babasaheb Bhimrao Ambedkar University, Lucknow, 226025, India.
| | - Shiv Kumar Dwivedi
- Department of Environmental Science, Babasaheb Bhimrao Ambedkar University, Lucknow, 226025, India
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Kumar V, Dwivedi SK. Bioremediation mechanism and potential of copper by actively growing fungus Trichoderma lixii CR700 isolated from electroplating wastewater. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 277:111370. [PMID: 32979751 DOI: 10.1016/j.jenvman.2020.111370] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 09/05/2020] [Accepted: 09/07/2020] [Indexed: 06/11/2023]
Abstract
Present study investigated the Cu2+ removal potential of Trichoderma lixii CR700, isolated from enormously heavy metal polluted electroplating wastewater. In the batch study, actively growing CR700 was able to remove 84.6% of Cu2+ at the concentration 10 mg/L of Cu2+ within 120 h after incubation and the accumulated and surface adsorbed amount of Cu was 0.51 and 0.47 mg/g of dry biomass respectively. T. lixii CR700 also showed efficient Cu2+ removal potential in the pH ranges from 5.0 to 8.0, in the presence of other co-occurring contaminant such as heavy metal, anions and metabolic inhibitor as well from real tannery wastewater. Alteration on cell surface of Cu2+ treated mycelia of T. lixii CR700 was analyzed using scanning electron microscope. Fourier transform infrared spectroscopic analysis was performed to identify the role of surface functional group in Cu2+ adsorption which revealed that COO─ functional group lead Cu2+ adsorption onto the surface of T. lixii CR700. Thus, T. lixii CR700 uses simultaneous surface sorption and accumulation mechanism in Cu2+ removal and can be potentially applied for bioremediation of Cu2+ contaminated wastewater in ecofriendly, safe and sustainable way.
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Affiliation(s)
- Vinay Kumar
- Department of Environmental Science, School of Environmental Sciences, Babasaheb Bhimrao Ambedkar University, Lucknow, 226025, India
| | - S K Dwivedi
- Department of Environmental Science, School of Environmental Sciences, Babasaheb Bhimrao Ambedkar University, Lucknow, 226025, India.
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Mahmoud GAE. Microbial Scavenging of Heavy Metals Using Bioremediation Strategies. RHIZOBIONT IN BIOREMEDIATION OF HAZARDOUS WASTE 2021:265-289. [DOI: 10.1007/978-981-16-0602-1_12] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
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Mycoremediation: A Novel Approach to Rescue Soil from Heavy Metal Contamination. Fungal Biol 2021. [DOI: 10.1007/978-3-030-54422-5_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Hachani C, Lamhamedi MS, Cameselle C, Gouveia S, Zine El Abidine A, Khasa DP, Béjaoui Z. Effects of Ectomycorrhizal Fungi and Heavy Metals (Pb, Zn, and Cd) on Growth and Mineral Nutrition of Pinus halepensis Seedlings in North Africa. Microorganisms 2020; 8:E2033. [PMID: 33352645 PMCID: PMC7766719 DOI: 10.3390/microorganisms8122033] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2020] [Revised: 11/14/2020] [Accepted: 11/17/2020] [Indexed: 11/17/2022] Open
Abstract
The pollution of soils by heavy metals resulting from mining activities is one of the major environmental problems in North Africa. Mycorrhizoremediation using mycorrhizal fungi and adapted plant species is emerging as one of the most innovative methods to remediate heavy metal pollution. This study aims to assess the growth and the nutritional status of ectomycorrhizal Pinus halepensis seedlings subjected to high concentrations of Pb, Zn, and Cd for possible integration in the restoration of heavy metals contaminated sites. Ectomycorrhizal and non-ectomycorrhizal P. halepensis seedlings were grown in uncontaminated (control) and contaminated soils for 12 months. Growth, mineral nutrition, and heavy metal content were assessed. Results showed that ectomycorrhizae significantly improved shoot and roots dry masses of P. halepensis seedlings, as well as nitrogen shoot content. The absorption of Pb, Zn, and Cd was much higher in the roots than in the shoots, and significantly more pronounced in ectomycorrhizal seedlings-especially for Zn and Cd. The presence of ectomycorrhizae significantly reduced the translocation factor of Zn and Cd and bioaccumulation factor of Pb and Cd, which enhanced the phytostabilizing potential of P. halepensis seedlings. These results support the use of ectomycorrhizal P. halepensis in the remediation of heavy metal contaminated sites.
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Affiliation(s)
- Chadlia Hachani
- Faculty of Sciences of Bizerte, University of Carthage, Jarzouna 7021, Tunisia and Laboratory of Forest Ecology (LR11INRGREF03), National Institute of Research in Rural Engineering, Water and Forests (INRGREF), University of Carthage, Hédi Elkarray Street, Elmenzah IV, BP 10, Ariana 2080, Tunisia;
| | - Mohammed S. Lamhamedi
- Center for Forest Studies, Faculty of Forestry, Geography and Geomatics, Abitibi Price Building, Laval University, Quebec, QC G1V 0A6, Canada;
| | - Claudio Cameselle
- BiotecnIA, Department of Chemical Engineering, University of Vigo, Rua Maxwell s/n, Building Fundicion, 36310 Vigo, Spain; (C.C.); (S.G.)
| | - Susana Gouveia
- BiotecnIA, Department of Chemical Engineering, University of Vigo, Rua Maxwell s/n, Building Fundicion, 36310 Vigo, Spain; (C.C.); (S.G.)
| | | | - Damase P. Khasa
- Centre for Forest Research and Institute for Systems and Integrative Biology, Université Laval, 1030 Avenue de la Médecine, Québec, QC G1V0A6, Canada;
| | - Zoubeir Béjaoui
- Faculty of Sciences of Bizerte, University of Carthage, Jarzouna 7021, Tunisia and Laboratory of Forest Ecology (LR11INRGREF03), National Institute of Research in Rural Engineering, Water and Forests (INRGREF), University of Carthage, Hédi Elkarray Street, Elmenzah IV, BP 10, Ariana 2080, Tunisia;
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Barberis L, Michalet S, Piola F, Binet P. Root fungal endophytes: identity, phylogeny and roles in plant tolerance to metal stress. Fungal Biol 2020; 125:326-345. [PMID: 33766311 DOI: 10.1016/j.funbio.2020.11.011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 10/12/2020] [Accepted: 11/29/2020] [Indexed: 12/27/2022]
Abstract
Metal trace elements accumulate in soils mainly because of anthropic activities, leading living organisms to develop strategies to handle metal toxicity. Plants often associate with root endophytic fungi, including nonmycorrhizal fungi, and some of these organisms are associated with metal tolerance. The lack of synthetic analyses of plant-endophyte-metal tripartite systems and the scant consideration for taxonomy led to this review aiming (1) to inventory non-mycorrhizal root fungal endophytes described with respect to their taxonomic diversity and (2) to determine the mutualistic roles of these plant-fungus associations under metal stress. More than 1500 species in 100 orders (mainly Hypocreales and Pleosporales) were reported from a wide variety of environments and hosts. Most reported endophytes had a positive effect on their host under metal stress, but with various effects on metal uptake or translocation and no clear taxonomic consistency. Future research considering the functional patterns and dynamics of these associations is thus encouraged.
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Affiliation(s)
- Louise Barberis
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Serge Michalet
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, UMR5557 Écologie microbienne, Villeurbanne, France
| | - Florence Piola
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Philippe Binet
- Université de Bourgogne-Franche-Comté, CNRS-UFC, UMR6249 Chrono-environnement, Montbéliard, France.
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Durand A, Maillard F, Foulon J, Chalot M. Interactions between Hg and soil microbes: microbial diversity and mechanisms, with an emphasis on fungal processes. Appl Microbiol Biotechnol 2020; 104:9855-9876. [PMID: 33043392 DOI: 10.1007/s00253-020-10795-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Revised: 07/06/2020] [Accepted: 07/21/2020] [Indexed: 11/25/2022]
Abstract
Mercury (Hg) is a highly toxic metal with no known biological function, and it can be highly bioavailable in terrestrial ecosystems. Although fungi are important contributors to a number of soil processes including plant nutrient uptake and decomposition, little is known about the effect of Hg on fungi. Fungi accumulate the largest amount of Hg and are the organisms capable of the highest bioaccumulation of Hg. While referring to detailed mechanisms in bacteria, this mini-review emphasizes the progress made recently on this topic and represents the first step towards a better understanding of the mechanisms underlying Hg tolerance and accumulation in fungal species and hence on the role of fungi within the Hg cycle at Hg-contaminated sites. KEY POINTS: • The fungal communities are more resilient than bacterial communities to Hg exposure. • The exposure to Hg is a threat to microbial soil functions involved in both C and nutrient cycles. • Fungal (hyper)accumulation of Hg may be important for the Hg cycle in terrestrial environments. • Understanding Hg tolerance and accumulation by fungi may lead to new remediation biotechnologies.
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Affiliation(s)
- Alexis Durand
- Laboratoire Chrono-Environnement, UMR 6249, Université de Bourgogne Franche-Comté, Pôle Universitaire du Pays de Montbéliard, 4 place Tharradin, BP 71427, 25211, Montbéliard, France
- Laboratoire Sols et Environnement, UMR 1120, Université de Lorraine - INRAE, 2 avenue de la Forêt de Haye BP 20 163, 54505, Vandœuvre-lès-Nancy, France
| | - François Maillard
- Laboratoire Chrono-Environnement, UMR 6249, Université de Bourgogne Franche-Comté, Pôle Universitaire du Pays de Montbéliard, 4 place Tharradin, BP 71427, 25211, Montbéliard, France
- Department of Plant and Microbial Biology, University of Minnesota, St. Paul, MN, 55108, USA
| | - Julie Foulon
- Laboratoire Chrono-Environnement, UMR 6249, Université de Bourgogne Franche-Comté, Pôle Universitaire du Pays de Montbéliard, 4 place Tharradin, BP 71427, 25211, Montbéliard, France
- Institut des Sciences de la Mer de Rimouski, Université du Québec à Rimouski, 310 Allée des Ursulines, C.P. 3300, Rimouski, QC, G5L 3A1, Canada
| | - Michel Chalot
- Laboratoire Chrono-Environnement, UMR 6249, Université de Bourgogne Franche-Comté, Pôle Universitaire du Pays de Montbéliard, 4 place Tharradin, BP 71427, 25211, Montbéliard, France.
- Faculté des Sciences et Technologies, Université de Lorraine, BP 70239, 54506, Vandoeuvre-les-Nancy, France.
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Mahmoud GAE, Ibrahim ABM, Mayer P. Zn(II) and Cd(II) thiosemicarbazones for stimulation/inhibition of kojic acid biosynthesis from Aspergillus flavus and the fungal defense behavior against the metal complexes' excesses. J Biol Inorg Chem 2020; 25:797-809. [PMID: 32661783 DOI: 10.1007/s00775-020-01802-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2020] [Accepted: 06/29/2020] [Indexed: 11/29/2022]
Abstract
The complexes {[ZnL1Cl] C1, [ZnL2Cl].0.5H2O C2, [CdL1Cl] C3, and [CdL2Cl] C4} were prepared from tridentate thiosemicarbazones {HL1 = 4-(3-nitrophenyl)-1-((pyridin-2-yl)methylene) thiosemicarbazide and HL2 = 4-(2,4-dimethoxyphenyl)-1-((pyridin-2-yl)methylene)thiosemicarbazide} and identified by elemental CHNS, spectroscopic {IR and UV-Vis.}, thermal and DMF solution electrical conductivity data. On another hand, kojic acid (KA) which represents important secondary metabolite with numerous hot spot applications was successfully biosynthesized from Aspergillus flavus and structurally analyzed by single crystal analysis. The Zn(II) complexes C1&C2 (0.3 mM) enhanced the KA biosynthesis by 70.87% and 42.26%, while 76.09% of C1 and 72.78% of C2 were absorbed by the fungal cells. The Cd(II) complexes C3&C4 at 0.3 mM inhibited KA production by 87.95% and 97.03% with Cd(II) consumption reaching to 40.09% & 37.3%, while 0.4 mM of C3&C4 resulted in 100% inhibition of kojic acid biosynthesis. Light microscopic analysis showed the fungal structural abnormalities and the cell antioxidant behavior was detected. These complexes could be highly applicable as new stimulators and inhibitors of kojic acid production.
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Affiliation(s)
| | - Ahmed B M Ibrahim
- Department of Chemistry, Faculty of Science, Assiut University, Assiut, 71516, Egypt
| | - Peter Mayer
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, Haus, 81377, Munich, Germany
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Lotlikar N, Damare S, Meena RM, Jayachandran S. Variable protein expression in marine-derived filamentous fungus Penicillium chrysogenum in response to varying copper concentrations and salinity. Metallomics 2020; 12:1083-1093. [PMID: 32301940 DOI: 10.1039/c9mt00316a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Copper is one of the essential trace dietary minerals for all living organisms, but is potentially toxic at higher concentrations, mainly due to the redox reactions in its transition state. Tolerance of microbes towards copper is primarily attributed to chelation and biosorption. In this study, marine-derived filamentous fungi were evaluated for their ability to remove Cu(ii) from a culture medium. Further, the cellular response of a select isolate to salinity stress (0, 35 and 100 PSU) and Cu(ii) stress (0, 100, and 500 ppm) was studied using the peptide mass fingerprinting technique, which revealed expression of 919 proteins, of which 55 proteins were commonly expressed across all conditions. Housekeeping proteins such as citrate synthase, pyruvate carboxylase, ribosomal proteins, ATP synthases, and more were expressed across all conditions. Reactive oxygen species scavenging proteins such as glutaredoxin, mitochondrial peroxiredoxins and thioredoxins were expressed under Cu(ii) and salinity stresses individually as well as in combination. Up-regulation of glutaredoxin under Cu(ii) stress with fold change values of 18.3 and 13.9 under 100 ppm and 500 ppm of Cu(ii) indicated active scavenging of free radicals to combat oxidative damage. The common mechanisms reported were enzymatic scavenging of free radicals, activation of DNA damage and repair proteins and probable intracellular metal chelation. This indicated multiple stress mechanisms employed by the isolate to combat the singular and synergistic effects of Cu(ii) and salinity stress.
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Affiliation(s)
- Nikita Lotlikar
- Biological Oceanography Division, CSIR-National Institute of Oceanography, Dona Paula, Goa - 403004, India.
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Mercury Phytoremediation with Lolium perenne-Mycorrhizae in Contaminated Soils. SUSTAINABILITY 2020. [DOI: 10.3390/su12093795] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The symbiotic association between the roots of a plant and the mycelium of some fungi is identified as mycorrhizae. Symbiosis helps the plant to obtain nutrients from the soil more efficiently, and may favor the phytoremediation capacity of plants such as Lolium perenne, in soils contaminated with mercury. In this study, the morphological and molecular response was evaluated, as well as the variation in mercury accumulation in the different structures of L. perenne when associated with arbuscular mycorrhizal fungi. Association tests were performed to determine the optimal concentration of the biological inoculant and it was found that the best results were given with the proportion of one part of inoculant in three parts of soil (w/w ratio). The differential expression of the glutathione-S-transferase GST gene was evaluated through real-time PCR and the concentration of heavy metals inside and outside the plant was evaluated with inductively coupled plasma atomic emission spectroscopy (ICP). It was found that the plants that were inoculated with mycorrhizae developed longer stems and shorter roots; in the same way, the GST gene had greater expression in the stem than in the root, largely because the roots help the filtration of nutrients to the stem, retaining metals and detoxifying by GST-catalyzed glutathione.
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40
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Gil-Martínez M, Navarro-Fernández CM, Murillo JM, Domínguez MT, Marañón T. Trace elements and C and N isotope composition in two mushroom species from a mine-spill contaminated site. Sci Rep 2020; 10:6434. [PMID: 32296130 PMCID: PMC7160199 DOI: 10.1038/s41598-020-63194-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Accepted: 03/24/2020] [Indexed: 11/08/2022] Open
Abstract
Fungi play a key role in the functioning of soil in terrestrial ecosystems, and in particular in the remediation of degraded soils. The contribution of fungi to carbon and nutrient cycles, along with their capability to mobilise soil trace elements, is well-known. However, the importance of life history strategy for these functions has not yet been thoroughly studied. This study explored the soil-fungi relationship of two wild edible fungi, the ectomycorrhizal Laccaria laccata and the saprotroph Volvopluteus gloiocephalus. Fruiting bodies and surrounding soils in a mine-spill contaminated area were analysed. Isotope analyses revealed Laccaria laccata fruiting bodies were 15N-enriched when compared to Volvopluteus gloiocephalus, likely due to the transfer of 15N-depleted compounds to their host plant. Moreover, Laccaria laccata fruiting bodies δ13C values were closer to host plant values than surrounding soil, while Volvopluteus gloiocephalus matched the δ13C composition to that of the soil. Fungal species presented high bioaccumulation and concentrations of Cd and Cu in their fruiting bodies. Human consumption of these fruiting bodies may represent a toxicological risk due to their elevated Cd concentrations.
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Affiliation(s)
- Marta Gil-Martínez
- Departamento de Protección del Sistema Suelo, Planta, Agua. Instituto de Recursos Naturales y Agrobiología de Sevilla, CSIC, Seville, Spain.
| | - Carmen M Navarro-Fernández
- Departamento de Protección del Sistema Suelo, Planta, Agua. Instituto de Recursos Naturales y Agrobiología de Sevilla, CSIC, Seville, Spain
| | - José M Murillo
- Departamento de Protección del Sistema Suelo, Planta, Agua. Instituto de Recursos Naturales y Agrobiología de Sevilla, CSIC, Seville, Spain
| | - María T Domínguez
- Departamento de Cristalografía, Mineralogía y Química Agrícola. Universidad de Sevilla, Seville, Spain
| | - Teodoro Marañón
- Departamento de Protección del Sistema Suelo, Planta, Agua. Instituto de Recursos Naturales y Agrobiología de Sevilla, CSIC, Seville, Spain
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Berthelot C, Zegeye A, Gaber DA, Chalot M, Franken P, Kovács GM, Leyval C, Blaudez D. Unravelling the Role of Melanin in Cd and Zn Tolerance and Accumulation of Three Dark Septate Endophytic Species. Microorganisms 2020; 8:E537. [PMID: 32276491 PMCID: PMC7232325 DOI: 10.3390/microorganisms8040537] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Revised: 03/30/2020] [Accepted: 04/01/2020] [Indexed: 02/06/2023] Open
Abstract
Dark septate endophytes (DSEs) are often trace element (TE)-tolerant fungi and are abundant in TE-polluted environments. The production of melanin, a black polymer found in cell walls, was hypothesized by several authors to play a role in the TE tolerance of DSEs. To test this hypothesis, we established a series of experiments using albino strains and melanin inhibitors and examined the responses to Cd and Zn. Six DSEs belonging to genera Cadophora sp., Leptodontidium sp. and Phialophora mustea, were evaluated. The strains mainly produced 1,8-dihydroxynaphthalene (DHN) melanin whereas 3,4-dihydroxyphenylalanin melanin was also synthetized. Cd and Zn decreased melanin synthesis in most of the strains. A reduction in melanin concentration in hyphae through the use of tricyclazole, an inhibitor of DHN-melanin synthesis, did not reduce the tolerance of the strains to Cd and Zn. Similarly, albino mutants of Leptodontidium sp. were not more sensitive to Cd and Zn than the WT strain. Moreover, tricyclazole-treated colonies accumulated less Cd but more Zn compared to untreated colonies. The Cd and Zn contents of Leptodontidium albino strains were variable and similar to that of the WT. The results suggest that melanin production is not an important functional trait that contributes to Cd and Zn tolerance, but might contribute to Cd accumulation.
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Affiliation(s)
- Charlotte Berthelot
- Université de Lorraine, CNRS, LIEC, F-54000 Nancy, France
- CTIFL, Centre de Carquefou, F-44483 Carquefou, France
| | - Asfaw Zegeye
- Université de Lorraine, CNRS, LIEC, F-54000 Nancy, France
| | - Dalia A. Gaber
- Botany and Microbiology Department, Faculty of Sciences, Assiut University, Assiut 71515, Egypt
- Leibniz Institute for Vegetable and Ornamental Crops, 14979 Groβbeeren, Germany
| | - Michel Chalot
- Université de Bourgogne-Franche-Comté, CNRS, Laboratoire Chrono-Environnement, F-25211 Montbéliard, France
- Université de Lorraine, F-54000 Nancy, France
| | - Philipp Franken
- Leibniz Institute for Vegetable and Ornamental Crops, 14979 Groβbeeren, Germany
- Erfurt Research Centre for Horticultural Crops, University of Applied Sciences Erfurt, 99090 Erfurt, Germany
| | - Gábor M. Kovács
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, 1117 Budapest, Hungary
- Plant Protection Institute, Centre for Agricultural Research, 1022 Budapest, Hungary
| | - Corinne Leyval
- Université de Lorraine, CNRS, LIEC, F-54000 Nancy, France
| | - Damien Blaudez
- Université de Lorraine, CNRS, LIEC, F-54000 Nancy, France
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Khullar S, Reddy MS. Arsenic toxicity and its mitigation in ectomycorrhizal fungus Hebeloma cylindrosporum through glutathione biosynthesis. CHEMOSPHERE 2020; 240:124914. [PMID: 31557642 DOI: 10.1016/j.chemosphere.2019.124914] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2019] [Revised: 09/16/2019] [Accepted: 09/18/2019] [Indexed: 05/27/2023]
Abstract
Arsenic (As) contamination is one of the most daunting environmental problem bothering the whole world. Exploring a suitable bioremediation technique is an urgent need of the hour. The present study focusses on scrutinizing the ectomycorrhizal (ECM) fungus for its potential role in As detoxification and understanding the molecular mechanisms responsible for its tolerance. When exposed to increasing concentrations of external As, the ECM fungus H. cylindrosporum accumulated the metalloid intracellularly, inducing the glutathione biosynthesis pathway. The genes coding for GSH biosynthesis enzymes, γ-glutamylcysteine synthetase (Hcγ-GCS) and glutathione synthetase (HcGS) were highly regulated by As stress. Arsenic coordinately upregulated the expression of both Hcγ-GCS and HcGS genes, thus resulting in increased Hcγ-GCS and HcGS protein expressions and enzyme activities, with substantial increase in intracellular GSH. Functional complementation of the two genes (Hcγ-GCS and HcGS) in their respective yeast mutants (gsh1Δ and gsh2Δ) further validated the role of both enzymes in mitigating As toxicity. These findings clearly highlight the potential importance of GSH antioxidant defense system in regulating the As induced responses and its detoxification in ECM fungus H. cylindrosporum.
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Affiliation(s)
- Shikha Khullar
- Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, 147004, Punjab, India
| | - M Sudhakara Reddy
- Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, 147004, Punjab, India.
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Shi L, Dong P, Song W, Li C, Lu H, Wen Z, Wang C, Shen Z, Chen Y. Comparative transcriptomic analysis reveals novel insights into the response to Cr(VI) exposure in Cr(VI) tolerant ectomycorrhizal fungi Pisolithus sp. 1 LS-2017. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 188:109935. [PMID: 31740233 DOI: 10.1016/j.ecoenv.2019.109935] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2019] [Revised: 10/21/2019] [Accepted: 11/08/2019] [Indexed: 06/10/2023]
Abstract
Chromium (Cr) is one of the most toxic heavy metals and a health hazard to millions of people worldwide. Ectomycorrhizal (ECM) fungi can assist plants in phytoremediation of heavy metal contaminated soil. Cr tolerance differs among ECM fungal varieties, but the underlying molecular mechanisms of Cr tolerance in ECM fungi are not clear. This study identified, analysed and compared the Cr(VI)-induced transcriptional changes between Cr(VI)-tolerant strain (Pisolithus sp. 1 LS-2017) and Cr(VI)-sensitive strain (Pisolithus sp. 2 LS-2017) by de novo transcriptomic analysis. The results showed that 93,642 assembled unique transcripts representing the 22,353 (46.76%) unigenes matched the proteins we have known in the Nr database and 47,801 unigenes were got from the Pisolithus spp. For DEGs between the control and 10 mg/L Cr(VI) treatment, cyanoamino acid metabolic, type I diabetes mellitus metabolism, nitrogen metabolism and beta-Alanine metabolism pathways were significantly enriched (p < 0.05) in Pisolithus sp. 1 LS-2017. Two nitrate reductase family genes (nidD, niiA) provide Cr(VI) tolerance for Pisolithus sp. 1 LS-2017 by regulating Cr(VI) reduction. In addition, NO produced by nidD, niiA regulated denitrification can alleviate Cr(VI) induced oxidative stress. In Pisolithus sp. 2 LS-2017, the alcC, aldA and lcf2 gene may alleviate Cr(VI) induced oxidative stress by protecting SH groups and increasing secondary metabolism, reducing detoxify aldehydes to carboxylic acids and producing LCPUFAs respectively; .T gene regulate Cr(VI) induced wound healing by pigmentation and stability of melanin in spore; MKP2 gene accelerate Cr(VI) induced cell death and gpmA gene regulated Cr(VI) induced energy emergency.
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Affiliation(s)
- Liang Shi
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
| | - Pengcheng Dong
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
| | - Wuyu Song
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
| | - Chenxi Li
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
| | - Haining Lu
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
| | - Zhugui Wen
- Jiangsu Coastal Area Institute of Agricultural Sciences, Yancheng, Jiangsu, 224002, China.
| | - Chunchun Wang
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
| | - Zhenguo Shen
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China; The Collaborated Lab. of Plant Molecular Ecology (between College of Life Sciences of Nanjing Agricultural University and Asian Natural Environmental Science Center of the University of Tokyo), Nanjing Agricultural University, Nanjing, 210095, China; Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agiricultural University, Nanjing, Jiangsu, 210095, China; National Joint Local Engineering Research Center for Rural Land Resources Use and Consolidation, Nanjing Agiricultural University, Nanjing, Jiangsu, 210095, China.
| | - Yahua Chen
- College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China; The Collaborated Lab. of Plant Molecular Ecology (between College of Life Sciences of Nanjing Agricultural University and Asian Natural Environmental Science Center of the University of Tokyo), Nanjing Agricultural University, Nanjing, 210095, China; Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource, Nanjing Agiricultural University, Nanjing, Jiangsu, 210095, China; National Joint Local Engineering Research Center for Rural Land Resources Use and Consolidation, Nanjing Agiricultural University, Nanjing, Jiangsu, 210095, China.
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Narendrula-Kotha R, Theriault G, Mehes-Smith M, Kalubi K, Nkongolo K. Metal Toxicity and Resistance in Plants and Microorganisms in Terrestrial Ecosystems. REVIEWS OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2020; 249:1-27. [PMID: 30725190 DOI: 10.1007/398_2018_22] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
Metals are major abiotic stressors of many organisms, but their toxicity in plants is not as studied as in microorganisms and animals. Likewise, research in plant responses to metal contamination is sketchy. Candidate genes associated with metal resistance in plants have been recently discovered and characterized. Some mechanisms of plant adaptation to metal stressors have been now decrypted. New knowledge on microbial reaction to metal contamination and the relationship between bacterial, archaeal, and fungal resistance to metals has broadened our understanding of metal homeostasis in living organisms. Recent reviews on metal toxicity and resistance mechanisms focused only on the role of transcriptomics, proteomics, metabolomics, and ionomics. This review is a critical analysis of key findings on physiological and genetic processes in plants and microorganisms in responses to soil metal contaminations.
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Affiliation(s)
| | - Gabriel Theriault
- Biomolecular Sciences Program, Laurentian University, Sudbury, ON, Canada
| | | | - Kersey Kalubi
- Biomolecular Sciences Program, Laurentian University, Sudbury, ON, Canada
| | - Kabwe Nkongolo
- Biomolecular Sciences Program, Laurentian University, Sudbury, ON, Canada.
- Department of Biology, Laurentian University, Sudbury, ON, Canada.
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The Role of Fungi and Genes for the Removal of Environmental Contaminants from Water/Wastewater Treatment Plants. Fungal Biol 2020. [DOI: 10.1007/978-3-030-41870-0_15] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Accumulation and Translocation of Phosphorus, Calcium, Magnesium, and Aluminum in Pinus massoniana Lamb. Seedlings Inoculated with Laccaria bicolor Growing in an Acidic Yellow Soil. FORESTS 2019. [DOI: 10.3390/f10121153] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Research Highlights: We demonstrate that ectomycorrhizal (ECM) fungi improve plant aluminum (Al)-tolerance in the field and Laccaria bicolor S238A is a promising ECM isolate. Furthermore, we interpret the underlying nutritional mechanism that ECM inoculation facilitates aboveground biomass production as well as nutrients accumulation and translocation. Background and Objectives: Al toxicity is a primary limiting factor for plants growing in acidic soils. Hydroponic/sand culture studies have shown that some ECM fungi could enhance plant Al-tolerance. However, the underlying mechanisms of ECM fungi in improving plant Al-tolerance in the field are still unknown. To fill this knowledge gap, the present study aimed to examine roles of ECM inoculation in biomass production, accumulation and translocation of nutrients and Al in the host plant grown in the field under Al treatment. Materials and Methods: 4-week-old Pinus massoniana seedlings were inoculated with three Laccaria bicolor isolates (L. bicolor 270, L. bicolor S238A or L. bicolor S238N) and grown in an acidic yellow soil under 1.0 mM Al treatment for 12 weeks in the field. Biomass production, accumulation and translocation of P, Ca, Mg, and Al were investigated in these 16-week-old P. massoniana seedlings. Results: All three of these L. bicolor isolates improved biomass production as well as P, Ca and Mg accumulation in P. massoniana seedlings. Moreover, the three ECM isolates facilitated the translocation of P, Ca, and Mg to aboveground in response to Al treatment, particularly when seedlings were inoculated with L. bicolor S238A. In addition, both L. bicolor 270 and L. bicolor S238A had no apparent effects on Al accumulation, while enhanced Al translocation to aboveground. In contrast, L. bicolor S238N decreased Al accumulation but had no significant effect on Al translocation. Conclusions: ECM fungi in the field improved plant Al-resistance by increasing nutrient uptake, and this was mostly due to translocation of P, Ca, and Mg to aboveground, not by decreasing the uptake and translocation of Al.
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Kumar V, Dwivedi SK. Hexavalent chromium stress response, reduction capability and bioremediation potential of Trichoderma sp. isolated from electroplating wastewater. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 185:109734. [PMID: 31574371 DOI: 10.1016/j.ecoenv.2019.109734] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2019] [Revised: 09/23/2019] [Accepted: 09/24/2019] [Indexed: 06/10/2023]
Abstract
In the present study we are investigating the Cr(VI) reduction potential of a multi-metal tolerant fungus (isolate CR700); isolated from electroplating wastewater. Based on the ITS region sequencing, the isolate was identified as Trichoderma lixii isolate CR700 and able to tolerate As(2000 mg/L), Ni(1500 mg/L), Zn(1200 mg/L), Cu(1200 mg/L), Cr(1000 mg/L), and 100 mg/L of Pb and Cd evident from tolerance assay. Cr(VI) reduction experiment was conducted in Erlenmeyer flasks containing different concentration of Cr(VI) (0-200 mg/L) amended potato dextrose broth medium followed by inoculating with a disk (0.5 cm diameter) of 7 days grown isolate CR700, and achieved a maximum of 99.4% within 120 h at 50 mg/L of Cr(VI). However, the accumulation of total Cr by isolate CR700 was 2.12 ± 0.15 mg/g of dried biomass at the same concentration after 144 h of exposure. Isolate CR700 showed the capability to reduce Cr(VI) at different physicochemical stress conditions such as pH, temperature, heavy metals, metabolic inhibitor and also in tannery wastewater. Fungus exhibited multifarious morphological and biochemical response under the exposure of Cr(VI); the scanning electron microscopic analysis revealed that Cr(VI) treated mycelia of isolate CR700 comparatively irregular, aggregated and swelled than without treated mycelia which might be due to the tolerance mechanism and vacuolar compartmentation of chromium. Moreover, energy dispersive spectroscopy and x-ray photoelectron spectroscopic analysis exposed the Cr(III) precipitation on the mycelia surface of isolate CR700 and Fourier-transform infrared spectroscopic analysis suggested the contribution of the protein associated functional group in the complexation of Cr(VI). The phytotoxicity test of fungal treated 100 mg/L of Cr(VI) supernatant on Vigna radiata and Cicer arietinum revealed the successful detoxification/remediation of Cr(VI).
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Affiliation(s)
- Vinay Kumar
- Department of Environmental Science, Babasaheb Bhimarao Ambedkar University, Lucknow, 226025, India.
| | - S K Dwivedi
- Department of Environmental Science, Babasaheb Bhimarao Ambedkar University, Lucknow, 226025, India
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Zulfiqar U, Farooq M, Hussain S, Maqsood M, Hussain M, Ishfaq M, Ahmad M, Anjum MZ. Lead toxicity in plants: Impacts and remediation. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2019; 250:109557. [PMID: 31545179 DOI: 10.1016/j.jenvman.2019.109557] [Citation(s) in RCA: 125] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2018] [Revised: 09/05/2019] [Accepted: 09/07/2019] [Indexed: 05/07/2023]
Abstract
Lead (Pb) is the second most toxic heavy metal after arsenic (As), which has no role in biological systems. Pb toxicity causes a range of damages to plants from germination to yield formation; however, its toxicity is both time and concentration dependent. Its exposure at higher rates disturbs the plant water and nutritional relations and causes oxidative damages to plants. Reduced rate of seed germination and plant growth under stress is mainly due to Pb interference with enzymatic activities, membrane damage and stomatal closure because of induction of absicic acid and negative correlation of Pb with potassium in plants. Pb induced structural changes in photosynthetic apparatus and reduced biosynthesis of chlorophyll pigments cause retardation of carbon metabolism. In this review, the noxious effects of Pb on germination, stand establishment, growth, water relations, nutrient uptake and assimilation, ultra-structural and oxidative damages, carbon metabolism and enzymatic activities in plants are reported. The Pb dynamics in soil rhizosphere and role of remediation strategies i.e. physical, chemical and biological to decontaminate the Pb polluted soils has also been described. Among them, biological strategies, including phytoremediation, microbe-assisted remediation and remediation by organic amendments, are cost effective and environmentally sound remedies for cleaning Pb contaminated soils. Use of organic manures and some agricultural practices have the potential to harvest better crops yield of good quality form Pb contaminated soils.
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Affiliation(s)
- Usman Zulfiqar
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Muhammad Farooq
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan; Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, PO Box 34, Al-Khoud 123, Oman; The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, 6001, Australia.
| | - Saddam Hussain
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Muhammad Maqsood
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Mubshar Hussain
- Department of Agronomy, Bahauddin Zakariya University, Multan, Pakistan; Agriculture Discipline, College of Science Health, Engineering and Education, Murdoch University, 90 South Street, Murdoch, WA, 6150, Australia
| | - Muhammad Ishfaq
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Muhammad Ahmad
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Muhammad Zohaib Anjum
- Department of Forestry and Range Management, University of Agriculture, Faisalabad, 38040, Pakistan
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Lalancette S, Lerat S, Roy S, Beaulieu C. Fungal Endophytes of Alnus incana ssp. rugosa and Alnus alnobetula ssp. crispa and Their Potential to Tolerate Heavy Metals and to Promote Plant Growth. MYCOBIOLOGY 2019; 47:415-429. [PMID: 32010463 PMCID: PMC6968708 DOI: 10.1080/12298093.2019.1660297] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/29/2019] [Revised: 08/20/2019] [Accepted: 08/22/2019] [Indexed: 06/10/2023]
Abstract
Soil contamination by metals is of particular interest, given that their retention times within the profile can be indefinite. Thus, phytostabilization can be viewed as a means of limiting metal toxicity in soils. Due to their ability to grow on contaminated soils, alders have repeatedly been used as key species in phytostabilization efforts. Alder ability to grow on contaminated sites stems, in part, from its association with microbial endophytes. This work emphasizes the fungal endophytes populations associated with Alnus incana ssp. rugosa and Alnus alnobetula ssp. crispa (previously A. viridis ssp. crispa) under a phytostabilization angle. Fungal endophytes were isolated from alder trees that were growing on or near disturbed environments; their tolerances to Cu, Ni, Zn, and As, and acidic pH (4.3, 3, and 2) were subsequently assessed. Cryptosporiopsis spp. and Rhizoscyphus spp. were identified as fungal endophytes of Alnus for the first time. When used as inoculants for alder, some isolates promoted plant growth, while others apparently presented antagonistic relationships with the host plant. This study reports the first step in finding the right fungal endophytic partners for two species of alder used in phytostabilization of metal-contaminated mining sites.
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Affiliation(s)
- Steve Lalancette
- Département de Biologie, Université de Sherbrooke, Sherbrooke, Canada
| | - Sylvain Lerat
- Département de Biologie, Université de Sherbrooke, Sherbrooke, Canada
| | - Sébastien Roy
- Département de Biologie, Université de Sherbrooke, Sherbrooke, Canada
| | - Carole Beaulieu
- Département de Biologie, Université de Sherbrooke, Sherbrooke, Canada
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50
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Borges KLR, Salvato F, Loziuk PL, Muddiman DC, Azevedo RA. Quantitative proteomic analysis of tomato genotypes with differential cadmium tolerance. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:26039-26051. [PMID: 31278641 DOI: 10.1007/s11356-019-05766-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Accepted: 06/17/2019] [Indexed: 05/06/2023]
Abstract
This is a report on comprehensive characterization of cadmium (Cd)-exposed root proteomes in tomato using label-free quantitative proteomic approach. Two genotypes differing in Cd tolerance, Pusa Ruby (Cd-tolerant) and Calabash Rouge (Cd-sensitive), were exposed during 4 days to assess the Cd-induced effects on root proteome. The overall changes in both genotypes in terms of differentially accumulated proteins (DAPs) were mainly associated to cell wall, redox, and stress responses. The proteome of the sensitive genotype was more responsive to Cd excess, once it presented higher number of DAPs. Contrasting protein accumulation in cellular component was observed: Cd-sensitive enhanced intracellular components, while the Cd-tolerant increased proteins of extracellular and envelope regions. Protective and regulatory mechanisms were different between genotypes, once the tolerant showed alterations of various protein groups that lead to a more efficient system to cope with Cd challenge. These findings could shed some light on the molecular basis underlying the Cd stress response in tomato, providing fundamental insights for the development of Cd-safe cultivars. Graphical abstract.
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Affiliation(s)
- Karina Lima Reis Borges
- Departamento de Genética, Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, Piracicaba, São Paulo, 13418-900, Brasil
| | - Fernanda Salvato
- Departamento de Genética, Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, Piracicaba, São Paulo, 13418-900, Brasil
- Departamento de Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, São Paulo, 13083-862, Brasil
| | - Philip L Loziuk
- W.M. Keck FTMS Laboratory for Human Health Research, Department of Chemistry, North Carolina State University, Raleigh, NC, 27695, USA
| | - David C Muddiman
- W.M. Keck FTMS Laboratory for Human Health Research, Department of Chemistry, North Carolina State University, Raleigh, NC, 27695, USA
| | - Ricardo Antunes Azevedo
- Departamento de Genética, Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, Piracicaba, São Paulo, 13418-900, Brasil.
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