1
|
Ikeda S, Tomita K, Nakagawa G, Kouzuma A, Watanabe K. Supplementation with Amino Acid Sources Facilitates Fermentative Growth of Shewanella oneidensis MR-1 in Defined Media. Appl Environ Microbiol 2023; 89:e0086823. [PMID: 37367298 PMCID: PMC10370299 DOI: 10.1128/aem.00868-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 06/04/2023] [Indexed: 06/28/2023] Open
Abstract
Shewanella oneidensis MR-1 is a facultative anaerobe that grows by respiration using a variety of electron acceptors. This organism serves as a model to study how bacteria thrive in redox-stratified environments. A glucose-utilizing engineered derivative of MR-1 has been reported to be unable to grow in glucose minimal medium (GMM) in the absence of electron acceptors, despite this strain having a complete set of genes for reconstructing glucose to lactate fermentative pathways. To gain insights into why MR-1 is incapable of fermentative growth, this study examined a hypothesis that this strain is programmed to repress the expression of some carbon metabolic genes in the absence of electron acceptors. Comparative transcriptomic analyses of the MR-1 derivative were conducted in the presence and absence of fumarate as an electron acceptor, and these found that the expression of many genes involved in carbon metabolism required for cell growth, including several tricarboxylic acid (TCA) cycle genes, was significantly downregulated in the absence of fumarate. This finding suggests a possibility that MR-1 is unable to grow fermentatively on glucose in minimal media owing to the shortage of nutrients essential for cell growth, such as amino acids. This idea was demonstrated in subsequent experiments that showed that the MR-1 derivative fermentatively grows in GMM containing tryptone or a defined mixture of amino acids. We suggest that gene regulatory circuits in MR-1 are tuned to minimize energy consumption under electron acceptor-depleted conditions, and that this results in defective fermentative growth in minimal media. IMPORTANCE It is an enigma why S. oneidensis MR-1 is incapable of fermentative growth despite having complete sets of genes for reconstructing fermentative pathways. Understanding the molecular mechanisms behind this defect will facilitate the development of novel fermentation technologies for the production of value-added chemicals from biomass feedstocks, such as electro-fermentation. The information provided in this study will also improve our understanding of the ecological strategies of bacteria living in redox-stratified environments.
Collapse
Affiliation(s)
- Sota Ikeda
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| | - Keisuke Tomita
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| | - Gen Nakagawa
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| | - Atsushi Kouzuma
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| | - Kazuya Watanabe
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| |
Collapse
|
2
|
Wang H, Zheng Y, Liu J, Zhu B, Qin W, Zhao F. An electrochemical system for the rapid and accurate quantitation of microbial exoelectrogenic ability. Biosens Bioelectron 2022; 215:114584. [DOI: 10.1016/j.bios.2022.114584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2022] [Revised: 07/15/2022] [Accepted: 07/19/2022] [Indexed: 11/02/2022]
|
3
|
Barakat NAM, Amen MT, Ali RH, Nassar MM, Fadali OA, Ali MA, Kim HY. Carbon Nanofiber Double Active Layer and Co-Incorporation as New Anode Modification Strategies for Power-Enhanced Microbial Fuel Cells. Polymers (Basel) 2022; 14:1542. [PMID: 35458291 PMCID: PMC9030816 DOI: 10.3390/polym14081542] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2022] [Revised: 03/19/2022] [Accepted: 03/23/2022] [Indexed: 12/04/2022] Open
Abstract
Co-doped carbon nanofiber mats can be prepared by the addition of cobalt acetate to the polyacrylonitrile/DMF electrospun solution. Wastewater obtained from food industries was utilized as the anolyte as well as microorganisms as the source in single-chamber batch mode microbial fuel cells. The results indicated that the single Co-free carbon nanofiber mat was not a good anode in the used microbial fuel cells. However, the generated power can be distinctly enhanced by using double active layers of pristine carbon nanofiber mats or a single layer Co-doped carbon nanofiber mat as anodes. Typically, after 24 h batching time, the estimated generated power densities were 10, 92, and 121 mW/m2 for single, double active layers, and Co-doped carbon nanofiber anodes, respectively. For comparison, the performance of the cell was investigated using carbon cloth and carbon paper as anodes, the observed power densities were smaller than the introduced modified anodes at 58 and 62 mW/m2, respectively. Moreover, the COD removal and Columbic efficiency were calculated for the proposed anodes as well as the used commercial ones. The results further confirm the priority of using double active layer or metal-doped carbon nanofiber anodes over the commercial ones. Numerically, the calculated COD removals were 29.16 and 38.95% for carbon paper and carbon cloth while 40.53 and 45.79% COD removals were obtained with double active layer and Co-doped carbon nanofiber anodes, respectively. With a similar trend, the calculated Columbic efficiencies were 26, 42, 52, and 71% for the same sequence.
Collapse
Affiliation(s)
- Nasser A M Barakat
- Chemical Engineering Department, Faculty of Engineering, Minia University, El-Minia 61519, Egypt
| | - Mohamed Taha Amen
- Microbiology Department, Faculty of Agriculture, Zagazig University, Zagazig 44511, Egypt
| | - Rasha H Ali
- Chemical Engineering Department, Faculty of Engineering, Minia University, El-Minia 61519, Egypt
| | - Mamdouh M Nassar
- Chemical Engineering Department, Faculty of Engineering, Minia University, El-Minia 61519, Egypt
| | - Olfat A Fadali
- Chemical Engineering Department, Faculty of Engineering, Minia University, El-Minia 61519, Egypt
| | - Marwa A Ali
- Chemical Engineering Department, Faculty of Engineering, Minia University, El-Minia 61519, Egypt
| | - Hak Yong Kim
- Department of Nano Convergence Engineering, Jeonbuk National University, Jeonju 54896, Korea
- Department of Organic Materials and Fiber Engineering, Jeonbuk National University, Jeonju 54896, Korea
| |
Collapse
|
4
|
Kuchenbuch A, Frank R, Ramos JV, Jahnke HG, Harnisch F. Electrochemical Microwell Plate to Study Electroactive Microorganisms in Parallel and Real-Time. Front Bioeng Biotechnol 2022; 9:821734. [PMID: 35242754 PMCID: PMC8887713 DOI: 10.3389/fbioe.2021.821734] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 12/28/2021] [Indexed: 11/26/2022] Open
Abstract
Microbial resource mining of electroactive microorganism (EAM) is currently methodically hampered due to unavailable electrochemical screening tools. Here, we introduce an electrochemical microwell plate (ec-MP) composed of a 96 electrochemical deepwell plate and a recently developed 96-channel multipotentiostat. Using the ec-MP we investigated the electrochemical and metabolic properties of the EAM models Shewanella oneidensis and Geobacter sulfurreducens with acetate and lactate as electron donor combined with an individual genetic analysis of each well. Electrochemical cultivation of pure cultures achieved maximum current densities (j max) and coulombic efficiencies (CE) that were well in line with literature data. The co-cultivation of S. oneidensis and G. sulfurreducens led to an increased current density of j max of 88.57 ± 14.04 µA cm-2 (lactate) and j max of 99.36 ± 19.12 µA cm-2 (lactate and acetate). Further, a decreased time period of reaching j max and biphasic current production was revealed and the microbial electrochemical performance could be linked to the shift in the relative abundance.
Collapse
Affiliation(s)
- Anne Kuchenbuch
- Department of Environmental Microbiology, UFZ—Helmholtz-Centre for Environmental Research GmbH, Leipzig, Germany
| | - Ronny Frank
- Centre for Biotechnology and Biomedicine, Molecular Biological-Biochemical Processing Technology, Leipzig University, Leipzig, Germany
| | - José Vazquez Ramos
- Centre for Biotechnology and Biomedicine, Molecular Biological-Biochemical Processing Technology, Leipzig University, Leipzig, Germany
| | - Heinz-Georg Jahnke
- Centre for Biotechnology and Biomedicine, Molecular Biological-Biochemical Processing Technology, Leipzig University, Leipzig, Germany
| | - Falk Harnisch
- Department of Environmental Microbiology, UFZ—Helmholtz-Centre for Environmental Research GmbH, Leipzig, Germany
| |
Collapse
|
5
|
Liang D, Liu X, Woodard TL, Holmes DE, Smith JA, Nevin KP, Feng Y, Lovley DR. Extracellular Electron Exchange Capabilities of Desulfovibrio ferrophilus and Desulfopila corrodens. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:16195-16203. [PMID: 34748326 DOI: 10.1021/acs.est.1c04071] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Microbial extracellular electron transfer plays an important role in diverse biogeochemical cycles, metal corrosion, bioelectrochemical technologies, and anaerobic digestion. Evaluation of electron uptake from pure Fe(0) and stainless steel indicated that, in contrast to previous speculation in the literature, Desulfovibrio ferrophilus and Desulfopila corrodens are not able to directly extract electrons from solid-phase electron-donating surfaces. D. ferrophilus grew with Fe(III) as the electron acceptor, but Dp. corrodens did not. D. ferrophilus reduced Fe(III) oxide occluded within porous alginate beads, suggesting that it released a soluble electron shuttle to promote Fe(III) oxide reduction. Conductive atomic force microscopy revealed that the D. ferrophilus pili are electrically conductive and the expression of a gene encoding an aromatics-rich putative pilin was upregulated during growth on Fe(III) oxide. The expression of genes for multi-heme c-type cytochromes was not upregulated during growth with Fe(III) as the electron acceptor, and genes for a porin-cytochrome conduit across the outer membrane were not apparent in the genome. The results suggest that D. ferrophilus has adopted a novel combination of strategies to enable extracellular electron transport, which may be of biogeochemical and technological significance.
Collapse
Affiliation(s)
- Dandan Liang
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P. R. China
| | - Xinying Liu
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing 100083, China
| | - Trevor L Woodard
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
| | - Dawn E Holmes
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- Department of Physical and Biological Sciences, Western New England University, Springfield, Massachusetts 01119-2612, United States
| | - Jessica A Smith
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
- Department of Biomolecular Sciences, Central Connecticut State University, New Britain, Connecticut 06053-2490, United States
| | - Kelly P Nevin
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
| | - Yujie Feng
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P. R. China
| | - Derek R Lovley
- Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, United States
| |
Collapse
|
6
|
Erben J, Wang X, Kerzenmacher S. High Current Production of
Shewanella Oneidensis
with Electrospun Carbon Nanofiber Anodes is Directly Linked to Biofilm Formation**. ChemElectroChem 2021. [DOI: 10.1002/celc.202100192] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Johannes Erben
- Center for Environmental Research and Sustainable Technology (UFT) University of Bremen 28359 Bremen Germany
| | - Xinyu Wang
- Laboratory for MEMS Applications IMTEK – Department of Microsystems Engineering University of Freiburg Georges-Koehler-Allee 103 79110 Freiburg Germany
| | - Sven Kerzenmacher
- Center for Environmental Research and Sustainable Technology (UFT) University of Bremen 28359 Bremen Germany
| |
Collapse
|
7
|
Yang X, Chen S. Microorganisms in sediment microbial fuel cells: Ecological niche, microbial response, and environmental function. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 756:144145. [PMID: 33303196 DOI: 10.1016/j.scitotenv.2020.144145] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Revised: 11/05/2020] [Accepted: 11/24/2020] [Indexed: 06/12/2023]
Abstract
A sediment microbial fuel cell (SMFC) is a device that harvests electrical energy from sediments rich in organic matter. SMFCs have been attracting increasing amounts of interest in environmental remediation, since they are capable of providing a clean and inexhaustible source of electron donors or acceptors and can be easily controlled by adjusting the electrochemical parameters. The microorganisms inhabiting sediments and the overlying water play a pivotal role in SMFCs. Since the SMFC is applied in an open environment rather than in an enclosed chamber, the effects of the environment on the microbes should be intense and the microbial community succession should be extremely complex. Thus, this review aims to provide an overview of the microorganisms in SMFCs, which few previous review papers have reported. In this study, the anodic and cathodic niches for the microorganisms in SMFCs are summarized, how the microbial population and community interact with the SMFC environment is discussed, a new microbial succession strategy called the electrode stimulation succession is proposed, and recent developments in the environmental functions of SMFCs are discussed from the perspective of microorganisms. Future studies are needed to investigate the electrode stimulation succession, the environmental function and the electron transfer mechanism in order to boost the application of SMFCs for power generation and environmental remediation.
Collapse
Affiliation(s)
- Xunan Yang
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, 510070, China.
| | - Shanshan Chen
- Guangdong Provincial Key Laboratory of Water Quality Improvement and Ecological Restoration for Watersheds, Institute of Environmental and Ecological Engineering, Guangdong University of Technology, Guangzhou 510006, China.
| |
Collapse
|
8
|
Benaiges-Fernandez R, Offeddu FG, Margalef-Marti R, Palau J, Urmeneta J, Carrey R, Otero N, Cama J. Geochemical and isotopic study of abiotic nitrite reduction coupled to biologically produced Fe(II) oxidation in marine environments. CHEMOSPHERE 2020; 260:127554. [PMID: 32688313 DOI: 10.1016/j.chemosphere.2020.127554] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2020] [Revised: 06/25/2020] [Accepted: 06/27/2020] [Indexed: 06/11/2023]
Abstract
Estuarine sediments are often characterized by abundant iron oxides, organic matter, and anthropogenic nitrogen compounds (e.g., nitrate and nitrite). Anoxic dissimilatory iron reducing bacteria (e.g., Shewanella loihica) are ubiquitous in these environments where they can catalyze the reduction of Fe(III) (oxyhydr)oxides, thereby releasing aqueous Fe(II). The biologically produced Fe(II) can later reduce nitrite to form nitrous oxide. The effect on nitrite reduction by both biologically produced and artificially amended Fe(II) was examined experimentally. Ferrihydrite was reduced by Shewanella loihica in a batch reaction with an anoxic synthetic sea water medium. Some of the Fe(II) released by S. loihica adsorbed onto ferrihydrite, which was involved in the transformation of ferrihydrite to magnetite. In a second set of experiments with identical medium, no microorganism was present, instead, Fe(II) was amended. The amount of solid-bound Fe(II) in the experiments with bioproduced Fe(II) increased the rate of abiotic NO2- reduction with respect to that with synthetic Fe(II), yielding half-lives of 0.07 and 0.47 d, respectively. The δ18O and δ15N of NO2- was measured through time for both the abiotic and innoculated experiments. The ratio of ε18O/ε15N was 0.6 for the abiotic experiments and 3.1 when NO2- was reduced by S. loihica, thus indicating two different mechanisms for the NO2- reduction. Notably, there is a wide range of the ε18O/ε15N values in the literature for abiotic and biotic NO2- reduction, as such, the use of this ratio to distinguish between reduction mechanisms in natural systems should be taken with caution. Therefore, we suggest an additional constraint to identify the mechanisms (i.e. abiotic/biotic) controlling NO2- reduction in natural settings through the correlation of δ15N-NO2- and the aqueous Fe(II) concentration.
Collapse
Affiliation(s)
- R Benaiges-Fernandez
- Institute of Environmental Assessment and Water Research (IDAEA, CSIC), 08034, Barcelona, Catalonia, Spain; Departament de Genètica, Microbiologia I Estadística, Universitat de Barcelona, 08028, Barcelona, Catalonia, Spain.
| | - F G Offeddu
- Institute of Environmental Assessment and Water Research (IDAEA, CSIC), 08034, Barcelona, Catalonia, Spain
| | - R Margalef-Marti
- Grup MAiMA, SGR Mineralogia Aplicada, Geoquímica I Geomicrobiologia, Departament de Mineralogia, Petrologia I Geologia Aplicada, Facultat de Ciències de La Terra, Universitat de Barcelona (UB), 08028, Barcelona, Catalonia, Spain; Institut de Recerca de L'Aigua (IdRA), Universitat de Barcelona (UB), 08001, Barcelona, Catalonia, Spain
| | - J Palau
- Institute of Environmental Assessment and Water Research (IDAEA, CSIC), 08034, Barcelona, Catalonia, Spain; Grup MAiMA, SGR Mineralogia Aplicada, Geoquímica I Geomicrobiologia, Departament de Mineralogia, Petrologia I Geologia Aplicada, Facultat de Ciències de La Terra, Universitat de Barcelona (UB), 08028, Barcelona, Catalonia, Spain; Institut de Recerca de L'Aigua (IdRA), Universitat de Barcelona (UB), 08001, Barcelona, Catalonia, Spain
| | - J Urmeneta
- Departament de Genètica, Microbiologia I Estadística, Universitat de Barcelona, 08028, Barcelona, Catalonia, Spain; Institut de Recerca de La Biodiversitat (IRBio), Universitat de Barcelona, 08028, Barcelona, Catalonia, Spain
| | - R Carrey
- Grup MAiMA, SGR Mineralogia Aplicada, Geoquímica I Geomicrobiologia, Departament de Mineralogia, Petrologia I Geologia Aplicada, Facultat de Ciències de La Terra, Universitat de Barcelona (UB), 08028, Barcelona, Catalonia, Spain; Institut de Recerca de L'Aigua (IdRA), Universitat de Barcelona (UB), 08001, Barcelona, Catalonia, Spain
| | - N Otero
- Grup MAiMA, SGR Mineralogia Aplicada, Geoquímica I Geomicrobiologia, Departament de Mineralogia, Petrologia I Geologia Aplicada, Facultat de Ciències de La Terra, Universitat de Barcelona (UB), 08028, Barcelona, Catalonia, Spain; Institut de Recerca de L'Aigua (IdRA), Universitat de Barcelona (UB), 08001, Barcelona, Catalonia, Spain; Serra Húnter Fellowship. Generalitat de Catalunya, Catalonia, Spain
| | - J Cama
- Institute of Environmental Assessment and Water Research (IDAEA, CSIC), 08034, Barcelona, Catalonia, Spain
| |
Collapse
|
9
|
Inohana Y, Katsuya S, Koga R, Kouzuma A, Watanabe K. Shewanella algae Relatives Capable of Generating Electricity from Acetate Contribute to Coastal-Sediment Microbial Fuel Cells Treating Complex Organic Matter. Microbes Environ 2020; 35. [PMID: 32147604 PMCID: PMC7308575 DOI: 10.1264/jsme2.me19161] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
To identify exoelectrogens involved in the generation of electricity from complex organic matter in coastal sediment (CS) microbial fuel cells (MFCs), MFCs were inoculated with CS obtained from tidal flats and estuaries in the Tokyo bay and supplemented with starch, peptone, and fish extract as substrates. Power output was dependent on the CS used as inocula and ranged between 100 and 600 mW m–2 (based on the projected area of the anode). Analyses of anode microbiomes using 16S rRNA gene amplicons revealed that the read abundance of some bacteria, including those related to Shewanella algae, positively correlated with power outputs from MFCs. Some fermentative bacteria were also detected as major populations in anode microbiomes. A bacterial strain related to S. algae was isolated from MFC using an electrode plate-culture device, and pure-culture experiments demonstrated that this strain exhibited the ability to generate electricity from organic acids, including acetate. These results suggest that acetate-oxidizing S. algae relatives generate electricity from fermentation products in CS-MFCs that decompose complex organic matter.
Collapse
Affiliation(s)
- Yoshino Inohana
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences
| | - Shohei Katsuya
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences
| | - Ryota Koga
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences
| | - Atsushi Kouzuma
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences
| | - Kazuya Watanabe
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences
| |
Collapse
|
10
|
Hirose A, Kouzuma A, Watanabe K. Hydrogen-dependent current generation and energy conservation by Shewanella oneidensis MR-1 in bioelectrochemical systems. J Biosci Bioeng 2020; 131:27-32. [PMID: 32958393 DOI: 10.1016/j.jbiosc.2020.08.012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Revised: 08/27/2020] [Accepted: 08/28/2020] [Indexed: 11/17/2022]
Abstract
Bioelectrochemical systems (BESs) are engineered systems that utilize electrochemical interactions between electrochemically active bacteria (EAB) and electrodes. BESs have attracted considerable attention for their utility in biotechnological processes. In a BES, hydrogen is generated by the reduction of water on low-potential cathode electrodes. However, limited information is available on the effect of hydrogen on the metabolism and growth of EAB and current generation in BESs. Here, we investigated the effect of hydrogen on current generation by a model EAB, Shewanella oneidensis MR-1. We found that this strain utilizes hydrogen as an electron donor for electrode respiration, thereby facilitating current generation and cell growth in the presence of organic substrates. Inner membrane (IM) quinones (i.e., ubiquinone and menaquinone), IM quinone-reactive hydrogenase Hya, and IM-bound quinone reductase CymA are involved in hydrogen-dependent current generation, suggesting that the redox cycling of IM quinones catalyzed by Hya and CymA contributes to the generation of the proton motive force and the synthesis of ATP via F0F1-ATPase. These findings indicate that the evolution of hydrogen on the cathode facilitates energy metabolism and growth of hydrogen-utilizing EAB associated with anodes. The results also suggest that hydrogen cycling between cathodes and anodes can hinder quantitative evaluation of organic substrate-dependent current generation in BESs.
Collapse
Affiliation(s)
- Atsumi Hirose
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji 192-0392, Tokyo, Japan
| | - Atsushi Kouzuma
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji 192-0392, Tokyo, Japan.
| | - Kazuya Watanabe
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji 192-0392, Tokyo, Japan
| |
Collapse
|
11
|
Min D, Cheng L, Liu DF, Li WW, Yu HQ. Electron transfer via the non-Mtr respiratory pathway from Shewanella putrefaciens CN-32 for methyl orange bioreduction. Process Biochem 2020. [DOI: 10.1016/j.procbio.2020.05.015] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
12
|
Gonzalez NM, Fitch A, Al-Bazi J. Development of a RP-HPLC method for determination of glucose in Shewanella oneidensis cultures utilizing 1-phenyl-3-methyl-5-pyrazolone derivatization. PLoS One 2020; 15:e0229990. [PMID: 32163461 PMCID: PMC7067395 DOI: 10.1371/journal.pone.0229990] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Accepted: 02/18/2020] [Indexed: 12/24/2022] Open
Abstract
A method was developed and validated for low-level detection of glucose. The method involves quantitation of glucose though derivitization with 1-phenyl-3-methyl-5-pyrazolone (PMP) and HPLC-DAD analysis. The developed method was found to be accurate and robust achieving detection limits as low as 0.09 nM. The applicability of the method was tested against microbial samples with glucose acting as a carbon fuel source. The method was shown to be able to accurately discriminate and quantify PMP-glucose derivatives within Shewanella oneidensis MR-1 samples. The method proved capable at examining glucose usage during the early hours of microbial growth, with detectable usage occurring as early as two hours. S. oneidensis cultures were found to grow more effectively in the presence of oxygen which coincided with more efficient glucose usage. Glucose usage further increased in the presence of competing electron acceptors. The rate at which S. oneidensis reached exponential growth was affected by the presence of ferric iron under microaerobic conditions. Such samples reached exponential growth approximately two hours sooner than aerobic samples.
Collapse
Affiliation(s)
- Norberto M. Gonzalez
- Department of Chemistry and Biochemistry, Loyola University Chicago, Chicago, IL, United States of America
- * E-mail:
| | - Alanah Fitch
- Department of Chemistry and Biochemistry, Loyola University Chicago, Chicago, IL, United States of America
| | - John Al-Bazi
- Department of Chemistry, Northeastern Illinois University, Chicago, IL, United States of America
| |
Collapse
|
13
|
Kong G, Song D, Guo J, Sun G, Zhu C, Chen F, Yang Y, Xu M. Lack of Periplasmic Non-heme Protein SorA Increases Shewanella decolorationis Current Generation. Front Microbiol 2020; 11:262. [PMID: 32158435 PMCID: PMC7052111 DOI: 10.3389/fmicb.2020.00262] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2019] [Accepted: 02/04/2020] [Indexed: 11/13/2022] Open
Abstract
Bacterial extracellular electron transport (EET) plays an important role in many natural and engineering processes. Some periplasmic non-heme redox proteins usually coexist with c-type cytochromes (CTCs) during the EET process. However, in contrast to CTCs, little is known about the roles of these non-heme redox proteins in EET. In this study, the transcriptome of Shewanella decolorationis S12 showed that the gene encoding a periplasmic sulfite dehydrogenase molybdenum-binding subunit SorA was significantly up-regulated during electrode respiration in microbial fuel cells (MFCs) compared with that during azo-dye reduction. The maximum current density of MFCs catalyzed by a mutant strain lacking SorA (ΔsorA) was 25% higher than that of wild strain S12 (20 vs. 16 μA/cm2). Both biofilm formation and the current generation of the anodic biofilms were increased by the disruption of sorA, which suggests that the existence of SorA in S. decolorationis S12 inhibits electrode respiration. In contrast, disruption of sorA had no effect on respiration by S. decolorationis S12 with oxygen, fumarate, azo dye, or ferric citrate as electron acceptors. This is the first report of the specific effect of a periplasmic non-heme redox protein on EET to electrode and provides novel information for enhancing bacterial current generation.
Collapse
Affiliation(s)
- Guannan Kong
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China
| | - Da Song
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China
| | - Jun Guo
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China
| | - Guoping Sun
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
| | - Chunjie Zhu
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
| | - Fusheng Chen
- College of Food Science and Technology, Henan University of Technology, Zhengzhou, China
| | - Yonggang Yang
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangzhou, China
| | - Meiying Xu
- Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou, China
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China
| |
Collapse
|
14
|
Chitin biomass powered microbial fuel cell for electricity production using halophilic Bacillus circulans BBL03 isolated from sea salt harvesting area. Bioelectrochemistry 2019; 130:107329. [DOI: 10.1016/j.bioelechem.2019.107329] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Revised: 07/06/2019] [Accepted: 07/06/2019] [Indexed: 12/15/2022]
|
15
|
Ren L, McCuskey SR, Moreland A, Bazan GC, Nguyen TQ. Tuning Geobacter sulfurreducens biofilm with conjugated polyelectrolyte for increased performance in bioelectrochemical system. Biosens Bioelectron 2019; 144:111630. [DOI: 10.1016/j.bios.2019.111630] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Revised: 08/17/2019] [Accepted: 08/22/2019] [Indexed: 12/12/2022]
|
16
|
Enzmann F, Mayer F, Stöckl M, Mangold KM, Hommel R, Holtmann D. Transferring bioelectrochemical processes from H-cells to a scalable bubble column reactor. Chem Eng Sci 2019. [DOI: 10.1016/j.ces.2018.08.056] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
|
17
|
Phansroy N, Khawdas W, Watanabe K, Aso Y, Ohara H. Microbial fuel cells equipped with an iron-plated carbon-felt anode and Shewanella oneidensis MR-1 with corn steep liquor as a fuel. J Biosci Bioeng 2018; 126:514-521. [PMID: 29764764 DOI: 10.1016/j.jbiosc.2018.04.011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Revised: 04/16/2018] [Accepted: 04/16/2018] [Indexed: 11/17/2022]
Abstract
A single chamber type microbial fuel cell (MFC) with 100 mL of chamber volume and 50 cm2 of air-cathode was developed in this study wherein a developed iron-plated carbon-felt anode and Shewanella oneidensis MR-1 were used. The performance of the iron-plated carbon-felt anode and the possibility of corn steep liquor (CSL) as a fuel, which was the byproduct of corn wet milling and contained lactic acid, was investigated here. MFCs equipped with iron-plated or non-plated carbon-felt anodes exhibited maximum current densities of 443 or 302 mA/m2 using 10 g/L of reagent-grade lactic acid, respectively. In addition, using centrifuged CSL without insoluble ingredients or non-centrifuged CSL as a fuel, the maximum current densities of the MFCs with iron-plated carbon-felt anode were 321 or 158 mA/m2, respectively. This report demonstrated the effect of iron-plated carbon-felt anode for electricity generation of MFC using S. oneidensis MR-1 and the performance of CSL as a fuel.
Collapse
Affiliation(s)
- Nichanan Phansroy
- Department of Biobased Materials Science, Kyoto Institute of Technology, 1 Hashigami-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan; Department of Materials and Metallurgical Engineering, Faculty of Engineering, Rajamangala University of Technology Thanyaburi, Klong 6, Thanyaburi, Pathumthani 12110, Thailand
| | - Wichean Khawdas
- Department of Biobased Materials Science, Kyoto Institute of Technology, 1 Hashigami-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Keigo Watanabe
- Department of Biobased Materials Science, Kyoto Institute of Technology, 1 Hashigami-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Yuji Aso
- Department of Biobased Materials Science, Kyoto Institute of Technology, 1 Hashigami-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Hitomi Ohara
- Department of Biobased Materials Science, Kyoto Institute of Technology, 1 Hashigami-cho, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.
| |
Collapse
|
18
|
Hirose A, Kasai T, Aoki M, Umemura T, Watanabe K, Kouzuma A. Electrochemically active bacteria sense electrode potentials for regulating catabolic pathways. Nat Commun 2018; 9:1083. [PMID: 29540717 PMCID: PMC5852097 DOI: 10.1038/s41467-018-03416-4] [Citation(s) in RCA: 77] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2017] [Accepted: 02/09/2018] [Indexed: 01/08/2023] Open
Abstract
Electrochemically active bacteria (EAB) receive considerable attention for their utility in bioelectrochemical processes. Although electrode potentials are known to affect the metabolic activity of EAB, it is unclear whether EAB are able to sense and respond to electrode potentials. Here, we show that, in the presence of a high-potential electrode, a model EAB Shewanella oneidensis MR-1 can utilize NADH-dependent catabolic pathways and a background formate-dependent pathway to achieve high growth yield. We also show that an Arc regulatory system is involved in sensing electrode potentials and regulating the expression of catabolic genes, including those for NADH dehydrogenase. We suggest that these findings may facilitate the use of EAB in biotechnological processes and offer the molecular bases for their ecological strategies in natural habitats.
Collapse
Affiliation(s)
- Atsumi Hirose
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Takuya Kasai
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Motohide Aoki
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Tomonari Umemura
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Kazuya Watanabe
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan
| | - Atsushi Kouzuma
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
| |
Collapse
|
19
|
Tang Y, Deng D, Zhou L, Jiang Y, Ma Y, Tian G, Liu Y. Analysis of electricity generation and community of electroactive biofilms enriched from various wastewater treatment stages. J Electroanal Chem (Lausanne) 2017. [DOI: 10.1016/j.jelechem.2017.09.004] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
|
20
|
Uno M, Phansroy N, Aso Y, Ohara H. Starch-fueled microbial fuel cells by two-step and parallel fermentation using Shewanella oneidensis MR-1 and Streptococcus bovis 148. J Biosci Bioeng 2017; 124:189-194. [DOI: 10.1016/j.jbiosc.2017.03.016] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2016] [Accepted: 03/27/2017] [Indexed: 12/31/2022]
|
21
|
Resilience, Dynamics, and Interactions within a Model Multispecies Exoelectrogenic-Biofilm Community. Appl Environ Microbiol 2017; 83:AEM.03033-16. [PMID: 28087529 DOI: 10.1128/aem.03033-16] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2016] [Accepted: 01/02/2017] [Indexed: 01/08/2023] Open
Abstract
Anode-associated multispecies exoelectrogenic biofilms are essential for the function of bioelectrochemical systems (BESs). The individual activities of anode-associated organisms and physiological responses resulting from coculturing are often hard to assess due to the high microbial diversity in these systems. Therefore, we developed a model multispecies biofilm comprising three exoelectrogenic proteobacteria, Shewanella oneidensis, Geobacter sulfurreducens, and Geobacter metallireducens, with the aim to study in detail the biofilm formation dynamics, the interactions between the organisms, and the overall activity of an exoelectrogenic biofilm as a consequence of the applied anode potential. The experiments revealed that the organisms build a stable biofilm on an electrode surface that is rather resilient to changes in the redox potential of the anode. The community operated at maximum electron transfer rates at electrode potentials that were higher than 0.04 V versus a normal hydrogen electrode. Current densities decreased gradually with lower potentials and reached half-maximal values at -0.08 V. Transcriptomic results point toward a positive interaction among the individual strains. S. oneidensis and G. sulfurreducens upregulated their central metabolisms as a response to cultivation under mixed-species conditions. G. sulfurreducens was detected in the planktonic phase of the bioelectrochemical reactors in mixed-culture experiments but not when it was grown in the absence of the other two organisms.IMPORTANCE In many cases, multispecies communities can convert organic substrates into electric power more efficiently than axenic cultures, a phenomenon that remains unresolved. In this study, we aimed to elucidate the potential mutual effects of multispecies communities in bioelectrochemical systems to understand how microbes interact in the coculture anodic network and to improve the community's conversion efficiency for organic substrates into electrical energy. The results reveal positive interactions that might lead to accelerated electron transfer in mixed-species anode communities. The observations made within this model biofilm might be applicable to a variety of nonaxenic systems in the field.
Collapse
|
22
|
Isolation and Characterization of a Novel Electrogenic Bacterium, Dietzia sp. RNV-4. PLoS One 2017; 12:e0169955. [PMID: 28192491 PMCID: PMC5305051 DOI: 10.1371/journal.pone.0169955] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2016] [Accepted: 12/27/2016] [Indexed: 11/30/2022] Open
Abstract
Electrogenic bacteria are organisms that can transfer electrons to extracellular electron acceptors and have the potential to be used in devices such as bioelectrochemical systems (BES). In this study, Dietzia sp. RNV-4 bacterium has been isolated and identified based on its biochemical, physiological and morphological characteristics, as well as by its 16S rRNA sequence analysis. Furthermore, the current density production and electron transfer mechanisms were investigated using bioelectrochemical methods. The chronoamperometric data showed that the biofilm of Dietzia sp. RNV-4 grew as the current increased with time, reaching a maximum of 176.6 ± 66.1 mA/m2 at the end of the experiment (7 d); this highly suggests that the current was generated by the biofilm. The main electron transfer mechanism, indicated by the cyclic voltammograms, was due to secreted redox mediators. By high performance liquid chromatography, canthaxanthin was identified as the main compound involved in charge transfer between the bacteria and the solid electrodes. Dietzia sp. RNV-4 was used as biological material in a microbial fuel cell (MFC) and the current density production was 299.4 ± 40.2 mA/m2. This is the first time that Dietzia sp. RNV-4 has been electrochemically characterized and identified as a new electrogenic strain.
Collapse
|
23
|
Tkach O, Sangeetha T, Maria S, Wang A. Performance of low temperature Microbial Fuel Cells (MFCs) catalyzed by mixed bacterial consortia. J Environ Sci (China) 2017; 52:284-292. [PMID: 28254049 DOI: 10.1016/j.jes.2016.11.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2016] [Revised: 08/03/2016] [Accepted: 11/08/2016] [Indexed: 06/06/2023]
Abstract
Microbial Fuel Cells (MFCs) are a promising technology for treating wastewater in a sustainable manner. In potential applications, low temperatures substantially reduce MFC performance. To better understand the effect of temperature and particularly how bioanodes respond to changes in temperature, we investigated the current generation of mixed-culture and pure-culture MFCs at two low temperatures, 10°C and 5°C. The results implied that the mixed-culture MFC sustainably performed better than the pure-culture (Shewanella) MFC at 10°C, but the electrogenic activity of anodic bacteria was substantially reduced at the lower temperature of 5°C. At 10°C, the maximum output voltage generated with the mixed-culture was 540-560mV, which was 10%-15% higher than that of Shewanella MFCs. The maximum power density reached 465.3±5.8mW/m2 for the mixed-culture at 10°C, while only 68.7±3.7mW/m2 was achieved with the pure-culture. It was shown that the anodic biofilm of the mixed-culture MFC had a lower overpotential and resistance than the pure-culture MFC. Phylogenetic analysis disclosed the prevalence of Geobacter and Pseudomonas rather than Shewanella in the mixed-culture anodic biofilm, which mitigated the increase of resistance or overpotential at low temperatures.
Collapse
Affiliation(s)
- Olga Tkach
- State Key Laboratory of Urban Water Resources and Environment (SKLUWRE), Harbin Institute of Technology, Harbin 150090, China.
| | - Thangavel Sangeetha
- State Key Laboratory of Urban Water Resources and Environment (SKLUWRE), Harbin Institute of Technology, Harbin 150090, China.
| | - Spiridonova Maria
- Krasnoyarsk State Institution of Railway Vehicles, Krasnoyarsk 660028, Russia
| | - Aijie Wang
- State Key Laboratory of Urban Water Resources and Environment (SKLUWRE), Harbin Institute of Technology, Harbin 150090, China; Key Laboratory of Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.
| |
Collapse
|
24
|
Membrane Separated Flow Cell for Parallelized Electrochemical Impedance Spectroscopy and Confocal Laser Scanning Microscopy to Characterize Electro-Active Microorganisms. Electrochim Acta 2016. [DOI: 10.1016/j.electacta.2016.10.057] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
25
|
Rudolph D, Bates D, DiChristina TJ, Mizaikoff B, Kranz C. Detection of Metal-reducing Enzyme Complexes by Scanning Electrochemical Microscopy. ELECTROANAL 2016. [DOI: 10.1002/elan.201600333] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Douglas Rudolph
- School of Chemistry and Biochemistry; Georgia Institute of Technology; Atlanta GA 30332-0230 U.S.A
| | - David Bates
- School of Biology; Georgia Institute of Technology; Atlanta GA 30332-0230 U.S.A
| | | | - Boris Mizaikoff
- Institute of Analytical and Bioanalytical Chemistry; Ulm University; Albert-Einstein-Allee 11 89081 Ulm Germany
| | - Christine Kranz
- Institute of Analytical and Bioanalytical Chemistry; Ulm University; Albert-Einstein-Allee 11 89081 Ulm Germany
| |
Collapse
|
26
|
Cheng Q, Call DF. Hardwiring microbes via direct interspecies electron transfer: mechanisms and applications. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2016; 18:968-80. [PMID: 27349520 DOI: 10.1039/c6em00219f] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Multicellular microbial communities are important catalysts in engineered systems designed to treat wastewater, remediate contaminated sediments, and produce energy from biomass. Understanding the interspecies interactions within them is therefore essential to design effective processes. The flow of electrons within these communities is especially important in the determination of reaction possibilities (thermodynamics) and rates (kinetics). Conventional models of electron transfer incorporate the diffusion of metabolites generated by one organism and consumed by a second, frequently referred to as mediated interspecies electron transfer (MIET). Evidence has emerged in the last decade that another method, called direct interspecies electron transfer (DIET), may occur between organisms or in conjunction with electrically conductive materials. Recent research has suggested that DIET can be stimulated in engineered systems to improve desired treatment goals and energy recovery in systems such as anaerobic digesters and microbial electrochemical technologies. In this review, we summarize the latest understanding of DIET mechanisms, the associated microorganisms, and the underlying thermodynamics. We also critically examine approaches to stimulate DIET in engineered systems and assess their effectiveness. We find that in most cases attempts to promote DIET in mixed culture systems do not yield the improvements expected based on defined culture studies. Uncertainties of other processes that may be co-occurring in real systems, such as contaminant sorption and biofilm promotion, need to be further investigated. We conclude by identifying areas of future research related to DIET and its application in biological treatment processes.
Collapse
Affiliation(s)
- Qiwen Cheng
- Department of Civil, Construction, and Environmental Engineering, North Carolina State University, Campus Box 7908, Raleigh, NC 27695, USA.
| | - Douglas F Call
- Department of Civil, Construction, and Environmental Engineering, North Carolina State University, Campus Box 7908, Raleigh, NC 27695, USA.
| |
Collapse
|
27
|
Yanuka-Golub K, Reshef L, Rishpon J, Gophna U. Community structure dynamics during startup in microbial fuel cells - The effect of phosphate concentrations. BIORESOURCE TECHNOLOGY 2016; 212:151-159. [PMID: 27092994 DOI: 10.1016/j.biortech.2016.04.016] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2016] [Revised: 04/03/2016] [Accepted: 04/04/2016] [Indexed: 06/05/2023]
Abstract
For microbial fuel cells (MFCs) to become a cost-effective wastewater treatment technology, they must produce a stable electro-active microbial community quickly and operate under realistic wastewater nutrient conditions. The composition of the anodic-biofilm and planktonic-cells communities was followed temporally for MFCs operated under typical laboratory phosphate concentrations (134mgL(-1)P) versus wastewater phosphate concentrations (16mgL(-1)P). A stable peak voltage was attained two-fold faster in MFCs operating under lower phosphate concentration. All anodic-biofilms were composed of well-known exoelectrogenic bacterial families; however, MFCs showing faster startup and a stable voltage had a Desulfuromonadaceae-dominated-biofilm, while biofilms co-dominated by Desulfuromonadaceae and Geobacteraceae characterized slower or less stable MFCs. Interestingly,planktonic-cell concentrations of these bacteria followed a similar trend as the anodic-biofilm and could therefore serve as a biomarker for its formation. These results demonstrate that wastewater-phosphate concentrations do not compromise MFCs efficiency, and considerably speed up startup times.
Collapse
Affiliation(s)
- Keren Yanuka-Golub
- The Porter School of Environmental Studies, Tel Aviv University, P.O. Box 39040, Tel Aviv 6997801, Israel.
| | - Leah Reshef
- Department of Molecular Microbiology and Biotechnology, Tel Aviv University, P.O. Box 39040, Tel Aviv 6997801, Israel.
| | - Judith Rishpon
- The Porter School of Environmental Studies, Tel Aviv University, P.O. Box 39040, Tel Aviv 6997801, Israel; Department of Molecular Microbiology and Biotechnology, Tel Aviv University, P.O. Box 39040, Tel Aviv 6997801, Israel.
| | - Uri Gophna
- The Porter School of Environmental Studies, Tel Aviv University, P.O. Box 39040, Tel Aviv 6997801, Israel; Department of Molecular Microbiology and Biotechnology, Tel Aviv University, P.O. Box 39040, Tel Aviv 6997801, Israel.
| |
Collapse
|
28
|
Tan Y, Adhikari RY, Malvankar NS, Ward JE, Nevin KP, Woodard TL, Smith JA, Snoeyenbos-West OL, Franks AE, Tuominen MT, Lovley DR. The Low Conductivity of Geobacter uraniireducens Pili Suggests a Diversity of Extracellular Electron Transfer Mechanisms in the Genus Geobacter. Front Microbiol 2016; 7:980. [PMID: 27446021 PMCID: PMC4923279 DOI: 10.3389/fmicb.2016.00980] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2016] [Accepted: 06/07/2016] [Indexed: 11/30/2022] Open
Abstract
Studies on the mechanisms for extracellular electron transfer in Geobacter species have primarily focused on Geobacter sulfurreducens, but the poor conservation of genes for some electron transfer components within the Geobacter genus suggests that there may be a diversity of extracellular electron transport strategies among Geobacter species. Examination of the gene sequences for PilA, the type IV pilus monomer, in Geobacter species revealed that the PilA sequence of Geobacter uraniireducens was much longer than that of G. sulfurreducens. This is of interest because it has been proposed that the relatively short PilA sequence of G. sulfurreducens is an important feature conferring conductivity to G. sulfurreducens pili. In order to investigate the properties of the G. uraniireducens pili in more detail, a strain of G. sulfurreducens that expressed pili comprised the PilA of G. uraniireducens was constructed. This strain, designated strain GUP, produced abundant pili, but generated low current densities and reduced Fe(III) very poorly. At pH 7, the conductivity of the G. uraniireducens pili was 3 × 10-4 S/cm, much lower than the previously reported 5 × 10-2 S/cm conductivity of G. sulfurreducens pili at the same pH. Consideration of the likely voltage difference across pili during Fe(III) oxide reduction suggested that G. sulfurreducens pili can readily accommodate maximum reported rates of respiration, but that G. uraniireducens pili are not sufficiently conductive to be an effective mediator of long-range electron transfer. In contrast to G. sulfurreducens and G. metallireducens, which require direct contact with Fe(III) oxides in order to reduce them, G. uraniireducens reduced Fe(III) oxides occluded within microporous beads, demonstrating that G. uraniireducens produces a soluble electron shuttle to facilitate Fe(III) oxide reduction. The results demonstrate that Geobacter species may differ substantially in their mechanisms for long-range electron transport and that it is important to have information beyond a phylogenetic affiliation in order to make conclusions about the mechanisms by which Geobacter species are transferring electrons to extracellular electron acceptors.
Collapse
Affiliation(s)
- Yang Tan
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Ramesh Y Adhikari
- Department of Physics, University of Massachusetts Amherst Amherst, MA, USA
| | - Nikhil S Malvankar
- Department of Microbiology, University of Massachusetts Amherst,Amherst, MA, USA; Department of Physics, University of Massachusetts AmherstAmherst, MA, USA; Department of Molecular Biophysics and Biochemistry, Microbial Sciences Institute, Yale UniversityNew Haven, CT, USA
| | - Joy E Ward
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Kelly P Nevin
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Trevor L Woodard
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | - Jessica A Smith
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| | | | - Ashley E Franks
- Department of Microbiology, University of Massachusetts Amherst,Amherst, MA, USA; Department of Physiology, Anatomy and Microbiology, La Trobe UniversityMelbourne, VIC, Australia
| | - Mark T Tuominen
- Department of Physics, University of Massachusetts Amherst Amherst, MA, USA
| | - Derek R Lovley
- Department of Microbiology, University of Massachusetts Amherst, Amherst, MA, USA
| |
Collapse
|
29
|
Eaktasang N, Kang CS, Lim H, Kwean OS, Cho S, Kim Y, Kim HS. Production of electrically-conductive nanoscale filaments by sulfate-reducing bacteria in the microbial fuel cell. BIORESOURCE TECHNOLOGY 2016; 210:61-67. [PMID: 26818576 DOI: 10.1016/j.biortech.2015.12.090] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2015] [Revised: 12/29/2015] [Accepted: 12/30/2015] [Indexed: 06/05/2023]
Abstract
This study reports that the obligate anaerobic microorganism, Desulfovibrio desulfuricans, a predominant sulfate-reducing bacterium (SRB) in soils and sediments, can produce nanoscale bacterial appendages for extracellular electron transfer. These nanofilaments were electrically-conductive (5.81S·m(-1)) and allowed SRBs to directly colonize the surface of insoluble or solid electron acceptors. Thus, the direct extracellular electron transfer to the insoluble electrode in the microbial fuel cell (MFC) was possible without inorganic electron-shuttling mediators. The production of nanofilaments was stimulated when only insoluble electron acceptors were available for cellular respiration. These results suggest that when availability of a soluble electron acceptor for SRBs (SO4(2-)) is limited, D. desulfuricans initiates the production of conductive nanofilaments as an alternative strategy to transfer electrons to insoluble electron acceptors. The findings of this study contribute to understanding of the role of SRBs in the biotransformation of various substances in soils and sediments and in the MFC.
Collapse
Affiliation(s)
- Numfon Eaktasang
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea
| | - Christina S Kang
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea
| | - Heejun Lim
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea
| | - Oh Sung Kwean
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea
| | - Suyeon Cho
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea
| | - Yohan Kim
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea
| | - Han S Kim
- Environmental Engineering, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 143-701 Republic of Korea.
| |
Collapse
|
30
|
Kim C, Ainala SK, Oh YK, Jeon BH, Park S, Kim JR. Metabolic flux change in Klebsiella pneumoniae L17 by anaerobic respiration in microbial fuel cell. BIOTECHNOL BIOPROC E 2016. [DOI: 10.1007/s12257-015-0777-6] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
31
|
Yoshida N, Miyata Y, Doi K, Goto Y, Nagao Y, Tero R, Hiraishi A. Graphene oxide-dependent growth and self-aggregation into a hydrogel complex of exoelectrogenic bacteria. Sci Rep 2016; 6:21867. [PMID: 26899353 PMCID: PMC4761877 DOI: 10.1038/srep21867] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2015] [Accepted: 02/02/2016] [Indexed: 01/20/2023] Open
Abstract
Graphene oxide (GO) is reduced by certain exoelectrogenic bacteria, but its effects on bacterial growth and metabolism are a controversial issue. This study aimed to determine whether GO functions as the terminal electron acceptor to allow specific growth of and electricity production by exoelectrogenic bacteria. Cultivation of environmental samples with GO and acetate as the sole substrate could specifically enrich exoelectrogenic bacteria with Geobacter species predominating (51-68% of the total populations). Interestingly, bacteria in these cultures self-aggregated into a conductive hydrogel complex together with biologically reduced GO (rGO). A novel GO-respiring bacterium designated Geobacter sp. strain R4 was isolated from this hydrogel complex. This organism exhibited stable electricity production at >1000 μA/cm(3) (at 200 mV vs Ag/AgCl) for more than 60 d via rGO while temporary electricity production using graphite felt. The better electricity production depends upon the characteristics of rGO such as a large surface area for biofilm growth, greater capacitance, and smaller internal resistance. This is the first report to demonstrate GO-dependent growth of exoelectrogenic bacteria while forming a conductive hydrogel complex with rGO. The simple put-and-wait process leading to the formation of hydrogel complexes of rGO and exoelectrogens will enable wider applications of GO to bioelectrochemical systems.
Collapse
Affiliation(s)
- Naoko Yoshida
- Center for Fostering Young and Innovative Researchers, Nagoya Institute of Technology, Nagoya, Aichi 466-8555, Japan.,Electronics-Inspired Interdisciplinary Research Institute (EIIRIS), Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan
| | - Yasushi Miyata
- Nagoya Municipal Industrial Research Institute, Nagoya, Aichi 456-0058, Japan
| | - Kasumi Doi
- Department of Civil Engineering, Nagoya Institute of Technology, Nagoya, Aichi 466-8555, Japan
| | - Yuko Goto
- Electronics-Inspired Interdisciplinary Research Institute (EIIRIS), Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan.,Department of Biomedical Science, College of Life and Health Science, Chubu University, Kasugai, Aichi 487-8501, Japan
| | - Yuji Nagao
- Department of Environmental and Life Sciences, Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan
| | - Ryugo Tero
- Electronics-Inspired Interdisciplinary Research Institute (EIIRIS), Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan.,Department of Environmental and Life Sciences, Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan
| | - Akira Hiraishi
- Electronics-Inspired Interdisciplinary Research Institute (EIIRIS), Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan.,Department of Environmental and Life Sciences, Toyohashi University of Technology, Toyohashi, Aichi 441-8580, Japan
| |
Collapse
|
32
|
Luo S, Guo W, Nealson KH, Feng X, He Z. ¹³C Pathway Analysis for the Role of Formate in Electricity Generation by Shewanella Oneidensis MR-1 Using Lactate in Microbial Fuel Cells. Sci Rep 2016; 6:20941. [PMID: 26868848 PMCID: PMC4751489 DOI: 10.1038/srep20941] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2015] [Accepted: 01/14/2016] [Indexed: 12/16/2022] Open
Abstract
Microbial fuel cell (MFC) is a promising technology for direct electricity generation from organics by microorganisms. The type of electron donors fed into MFCs affects the electrical performance, and mechanistic understanding of such effects is important to optimize the MFC performance. In this study, we used a model organism in MFCs, Shewanella oneidensis MR-1, and (13)C pathway analysis to investigate the role of formate in electricity generation and the related microbial metabolism. Our results indicated a synergistic effect of formate and lactate on electricity generation, and extra formate addition on the original lactate resulted in more electrical output than using formate or lactate as a sole electron donor. Based on the (13)C tracer analysis, we discovered decoupled cell growth and electricity generation in S. oneidensis MR-1 during co-utilization of lactate and formate (i.e., while the lactate was mainly metabolized to support the cell growth, the formate was oxidized to release electrons for higher electricity generation). To our best knowledge, this is the first time that (13)C tracer analysis was applied to study microbial metabolism in MFCs and it was demonstrated to be a valuable tool to understand the metabolic pathways affected by electron donors in the selected electrochemically-active microorganisms.
Collapse
Affiliation(s)
- Shuai Luo
- Department of Civil and Environmental Engineering, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA
| | - Weihua Guo
- Department of Biological Systems Engineering, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA
| | - Kenneth H Nealson
- Department of Earth Sciences, University of Southern California, Los Angeles, CA 90089, USA
| | - Xueyang Feng
- Department of Biological Systems Engineering, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA
| | - Zhen He
- Department of Civil and Environmental Engineering, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA
| |
Collapse
|
33
|
Metabolic Characteristics of a Glucose-Utilizing Shewanella oneidensis Strain Grown under Electrode-Respiring Conditions. PLoS One 2015; 10:e0138813. [PMID: 26394222 PMCID: PMC4579138 DOI: 10.1371/journal.pone.0138813] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2015] [Accepted: 09/03/2015] [Indexed: 12/18/2022] Open
Abstract
In bioelectrochemical systems, the electrode potential is an important parameter affecting the electron flow between electrodes and microbes and microbial metabolic activities. Here, we investigated the metabolic characteristics of a glucose-utilizing strain of engineered Shewanella oneidensis under electrode-respiring conditions in electrochemical reactors for gaining insight into how metabolic pathways in electrochemically active bacteria are affected by the electrode potential. When an electrochemical reactor was operated with its working electrode poised at +0.4 V (vs. an Ag/AgCl reference electrode), the engineered S. oneidensis strain, carrying a plasmid encoding a sugar permease and glucose kinase of Escherichia coli, generated current by oxidizing glucose to acetate and produced D-lactate as an intermediate metabolite. However, D-lactate accumulation was not observed when the engineered strain was grown with a working electrode poised at 0 V. We also found that transcription of genes involved in pyruvate and D-lactate metabolisms was upregulated at a high electrode potential compared with their transcription at a low electrode potential. These results suggest that the carbon catabolic pathway of S. oneidensis can be modified by controlling the potential of a working electrode in an electrochemical bioreactor.
Collapse
|
34
|
Kouzuma A, Kasai T, Hirose A, Watanabe K. Catabolic and regulatory systems in Shewanella oneidensis MR-1 involved in electricity generation in microbial fuel cells. Front Microbiol 2015; 6:609. [PMID: 26136738 PMCID: PMC4468914 DOI: 10.3389/fmicb.2015.00609] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2015] [Accepted: 06/02/2015] [Indexed: 12/12/2022] Open
Abstract
Shewanella oneidensis MR-1 is a facultative anaerobe that respires using a variety of inorganic and organic compounds. MR-1 is also capable of utilizing extracellular solid materials, including anodes in microbial fuel cells (MFCs), as electron acceptors, thereby enabling electricity generation. As MFCs have the potential to generate electricity from biomass waste and wastewater, MR-1 has been extensively studied to identify the molecular systems that are involved in electricity generation in MFCs. These studies have demonstrated the importance of extracellular electron-transfer (EET) pathways that electrically connect the quinone pool in the cytoplasmic membrane to extracellular electron acceptors. Electricity generation is also dependent on intracellular catabolic pathways that oxidize electron donors, such as lactate, and regulatory systems that control the expression of genes encoding the components of catabolic and electron-transfer pathways. In addition, recent findings suggest that cell-surface polymers, e.g., exopolysaccharides, and secreted chemicals, which function as electron shuttles, are also involved in electricity generation. Despite these advances in our knowledge on the EET processes in MR-1, further efforts are necessary to fully understand the underlying intra- and extracellular molecular systems for electricity generation in MFCs. We suggest that investigating how MR-1 coordinates these systems to efficiently transfer electrons to electrodes and conserve electrochemical energy for cell proliferation is important for establishing the biological basis for MFCs.
Collapse
Affiliation(s)
- Atsushi Kouzuma
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences , Hachioji, Japan
| | - Takuya Kasai
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences , Hachioji, Japan
| | - Atsumi Hirose
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences , Hachioji, Japan
| | - Kazuya Watanabe
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences , Hachioji, Japan
| |
Collapse
|
35
|
Fang Y, Xu M, Wu WM, Chen X, Sun G, Guo J, Liu X. Characterization of the enhancement of zero valent iron on microbial azo reduction. BMC Microbiol 2015; 15:85. [PMID: 25888062 PMCID: PMC4428006 DOI: 10.1186/s12866-015-0419-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2014] [Accepted: 03/27/2015] [Indexed: 11/21/2022] Open
Abstract
BACKGROUND The microbial method for the treatment of azo dye is promising, but the reduction of azo dye is the rate-limiting step. Zero valent iron (Fe(0)) can enhance microbial azo reduction, but the interactions between microbes and Fe(0) and the potential mechanisms of enhancement remain unclear. Here, Shewanella decolorationis S12, a typical azo-reducing bacterium, was used to characterize the enhancement of Fe(0) on microbial decolorization. RESULTS The results indicated that anaerobic iron corrosion was a key inorganic chemical process for the enhancement of Fe(0) on microbial azo reduction, in which OH(-), H2, and Fe(2+) were produced. Once Fe(0) was added to the microbial azo reduction system, the proper pH for microbial azo reduction was maintained by OH(-), and H2 served as the favored electron donor for azo respiration. Subsequently, the bacterial biomass yield and viability significantly increased. Following the corrosion of Fe(0), nanometer-scale Fe precipitates were adsorbed onto cell surfaces and even accumulated inside cells as observed by transmission electron microscope energy dispersive spectroscopy (TEM-EDS). CONCLUSIONS A conceptual model for Fe(0)-assisted azo dye reduction by strain S12 was established to explain the interactions between microbes and Fe(0) and the potential mechanisms of enhancement. This model indicates that the enhancement of microbial azo reduction in the presence of Fe(0) is mainly due to the stimulation of microbial growth and activity by supplementation with elemental iron and H2 as an additional electron donor. This study has expanded our knowledge of the enhancement of microbial azo reduction by Fe(0) and laid a foundation for the development of Fe(0)-microbial integrated azo dye wastewater treatment technology.
Collapse
Affiliation(s)
- Yun Fang
- School of Minerals Processing and Bioengineering, Central South University, 410083, Changsha, China.
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, 510070, Guangzhou, China.
- State Key Laboratory of Applied Microbiology Southern China, 510070, Guangzhou, China.
- Key Laboratory of Biometallurgy of Ministry of Education, 410083, Changsha, China.
| | - Meiying Xu
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, 510070, Guangzhou, China.
- State Key Laboratory of Applied Microbiology Southern China, 510070, Guangzhou, China.
| | - Wei-Min Wu
- Department of Civil and Environmental Engineering, Center for Sustainable Development and Global Competitiveness, Codiga Resource Recovery Center, Stanford University, Stanford, CA, 94305, USA.
| | - Xingjuan Chen
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, 510070, Guangzhou, China.
- State Key Laboratory of Applied Microbiology Southern China, 510070, Guangzhou, China.
| | - Guoping Sun
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, 510070, Guangzhou, China.
- State Key Laboratory of Applied Microbiology Southern China, 510070, Guangzhou, China.
| | - Jun Guo
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, 510070, Guangzhou, China.
- State Key Laboratory of Applied Microbiology Southern China, 510070, Guangzhou, China.
| | - Xueduan Liu
- School of Minerals Processing and Bioengineering, Central South University, 410083, Changsha, China.
- Key Laboratory of Biometallurgy of Ministry of Education, 410083, Changsha, China.
| |
Collapse
|
36
|
Changes in Carbon Electrode Morphology Affect Microbial Fuel Cell Performance with Shewanella oneidensis MR-1. ENERGIES 2015. [DOI: 10.3390/en8031817] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
37
|
Gorgel M, Ulstrup JJ, Bøggild A, Jones NC, Hoffmann SV, Nissen P, Boesen T. High-resolution structure of a type IV pilin from the metal-reducing bacterium Shewanella oneidensis. BMC STRUCTURAL BIOLOGY 2015; 15:4. [PMID: 25886849 PMCID: PMC4376143 DOI: 10.1186/s12900-015-0031-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2015] [Accepted: 02/02/2015] [Indexed: 11/10/2022]
Abstract
Background Type IV pili are widely expressed among Gram-negative bacteria, where they are involved in biofilm formation, serve in the transfer of DNA, motility and in the bacterial attachment to various surfaces. Type IV pili in Shewanella oneidensis are also supposed to play an important role in extracellular electron transfer by the attachment to sediments containing electron acceptors and potentially forming conductive nanowires. Results The potential nanowire type IV pilin PilBac1 from S. oneidensis was characterized by a combination of complementary structural methods and the atomic structure was determined at a resolution of 1.67 Å by X-ray crystallography. PilBac1 consists of one long N-terminal α-helix packed against four antiparallel β-strands, thus revealing the core fold of type IV pilins. In the crystal, PilBac1 forms a parallel dimer with a sodium ion bound to one of the monomers. Interestingly, our PilBac1 crystal structure reveals two unusual features compared to other type IVa pilins: an unusual position of the disulfide bridge and a straight α-helical section, which usually exhibits a pronounced kink. This straight helix leads to a distinct packing in a filament model of PilBac1 based on an EM model of a Neisseria pilus. Conclusions In this study we have described the first structure of a pilin from Shewanella oneidensis. The structure possesses features of the common type IV pilin core, but also exhibits significant variations in the α-helical part and the D-region. Electronic supplementary material The online version of this article (doi:10.1186/s12900-015-0031-7) contains supplementary material, which is available to authorized users.
Collapse
Affiliation(s)
- Manuela Gorgel
- Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10c, Aarhus C, 8000, Denmark.
| | - Jakob Jensen Ulstrup
- Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10c, Aarhus C, 8000, Denmark.
| | - Andreas Bøggild
- Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10c, Aarhus C, 8000, Denmark.
| | - Nykola C Jones
- ISA, Department of Physics and Astronomy, Aarhus University, Ny Munkegade 120, building 1525, Aarhus C, 8000, Denmark.
| | - Søren V Hoffmann
- ISA, Department of Physics and Astronomy, Aarhus University, Ny Munkegade 120, building 1525, Aarhus C, 8000, Denmark.
| | - Poul Nissen
- Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10c, Aarhus C, 8000, Denmark.
| | - Thomas Boesen
- Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10c, Aarhus C, 8000, Denmark.
| |
Collapse
|
38
|
Abstract
The aim of the study is to compare different kinds of microbial species for electricity production in the microbial fuel cells (MFCs) at low temperature. Experiments were conducted with single-chambered MFCs and medium anode inoculated with pure culture from activated sludge. Three kinds of exoelectrogens includingKlebsiella sp.ALL-1,Shewanella sp.ALL-2 andEnterobacter sp.ALL-3 were used for evaluating their electricity activity. After adding solution into MFCs, the power of density grew from 50 mV to over 530 mV, and finally maintained at about 520+10 mV during the complete cycles. The results showed that MFCs withEnterobacter sp.ALL-3 had higher power and current density, shorter and more stable working circle at same level of voltage producing than other kinds of exoelectrogens. These characteristics madeEnterobacter sp.ALL-3 as optimum exoelectrogen for electricity production at low temperature.
Collapse
|
39
|
A Highly Efficient Mixed-culture Biofilm as Anodic Catalyst and Insights into Its Enhancement through Electrochemistry by Comparison with G. sulfurreducens. Electrochim Acta 2015. [DOI: 10.1016/j.electacta.2014.12.152] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
40
|
Semenec L, E Franks A. Delving through electrogenic biofilms: from anodes to cathodes to microbes. AIMS BIOENGINEERING 2015. [DOI: 10.3934/bioeng.2015.3.222] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
|
41
|
Xu H, Wang K, Holmes DE. Bioelectrochemical removal of carbon dioxide (CO2): an innovative method for biogas upgrading. BIORESOURCE TECHNOLOGY 2014; 173:392-398. [PMID: 25444882 DOI: 10.1016/j.biortech.2014.09.127] [Citation(s) in RCA: 54] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2014] [Revised: 09/23/2014] [Accepted: 09/24/2014] [Indexed: 06/04/2023]
Abstract
Innovative methods for biogas upgrading based on biological/in-situ concepts have started to arouse considerable interest. Bioelectrochemical removal of CO2 for biogas upgrading was proposed here and demonstrated in both batch and continuous experiments. The in-situ biogas upgrading system seemed to perform better than the ex-situ one, but CO2 content was kept below 10% in both systems. The in-situ system's performance was further enhanced under continuous operation. Hydrogenotrophic methanogenesis and alkali production with CO2 absorption could be major contributors to biogas upgrading. Molecular studies showed that all the biocathodes associated with biogas upgrading were dominated by sequences most similar to the same hydrogenotrophic methanogen species, Methanobacterium petrolearium (97-99% sequence identity). Conclusively, bioelectrochemical removal of CO2 showed great potential for biogas upgrading.
Collapse
Affiliation(s)
- Heng Xu
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China; Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA
| | - Kaijun Wang
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China
| | - Dawn E Holmes
- Department of Microbiology, University of Massachusetts, Amherst, MA 01003, USA; Department of Physical and Biological Sciences, Western New England University, Springfield, MA 01119, USA.
| |
Collapse
|
42
|
Sharma M, Bajracharya S, Gildemyn S, Patil SA, Alvarez-Gallego Y, Pant D, Rabaey K, Dominguez-Benetton X. A critical revisit of the key parameters used to describe microbial electrochemical systems. Electrochim Acta 2014. [DOI: 10.1016/j.electacta.2014.02.111] [Citation(s) in RCA: 90] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|
43
|
Yang Y, Xiang Y, Xia C, Wu WM, Sun G, Xu M. Physiological and electrochemical effects of different electron acceptors on bacterial anode respiration in bioelectrochemical systems. BIORESOURCE TECHNOLOGY 2014; 164:270-275. [PMID: 24862003 DOI: 10.1016/j.biortech.2014.04.098] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Revised: 04/23/2014] [Accepted: 04/25/2014] [Indexed: 06/03/2023]
Abstract
To understand the interactions between bacterial electrode respiration and the other ambient bacterial electron acceptor reductions, alternative electron acceptors (nitrate, Fe2O3, fumarate, azo dye MB17) were added singly or multiply into Shewanella decolorationis microbial fuel cells (MFCs). All the added electron acceptors were reduced simultaneously with current generation. Adding nitrate or MB17 resulted in more rapid cell growth, higher flavin concentration and higher biofilm metabolic viability, but lower columbic efficiency (CE) and normalized energy recovery (NER) while the CE and NER were enhanced by Fe2O3 or fumarate. The added electron acceptors also significantly influenced the cyclic voltammetry profile of anode biofilm probably via altering the cytochrome c expression. The highest power density was observed in MFCs added with MB17 due to the electron shuttle role of the naphthols from MB17 reduction. The results provided important information for MFCs applied in practical environments where contains various electron acceptors.
Collapse
Affiliation(s)
- Yonggang Yang
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China; Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, China
| | - Yinbo Xiang
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, China
| | - Chunyu Xia
- Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, China
| | - Wei-Min Wu
- Department of Civil & Environmental Engineering, Center for Sustainable Development & Global Competitiveness, Stanford University, Stanford 94305-4020, USA
| | - Guoping Sun
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China; Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, China
| | - Meiying Xu
- State Key Laboratory of Applied Microbiology Southern China, Guangzhou, China; Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Institute of Microbiology, Guangzhou, China.
| |
Collapse
|
44
|
Renslow R, Babauta J, Kuprat A, Schenk J, Ivory C, Fredrickson J, Beyenal H. Modeling biofilms with dual extracellular electron transfer mechanisms. Phys Chem Chem Phys 2013; 15:19262-83. [PMID: 24113651 PMCID: PMC3868370 DOI: 10.1039/c3cp53759e] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electrochemically active biofilms have a unique form of respiration in which they utilize solid external materials as terminal electron acceptors for their metabolism. Currently, two primary mechanisms have been identified for long-range extracellular electron transfer (EET): a diffusion- and a conduction-based mechanism. Evidence in the literature suggests that some biofilms, particularly Shewanella oneidensis, produce the requisite components for both mechanisms. In this study, a generic model is presented that incorporates the diffusion- and the conduction-based mechanisms and allows electrochemically active biofilms to utilize both simultaneously. The model was applied to S. oneidensis and Geobacter sulfurreducens biofilms using experimentally generated data found in the literature. Our simulation results show that (1) biofilms having both mechanisms available, especially if they can interact, may have a metabolic advantage over biofilms that can use only a single mechanism; (2) the thickness of G. sulfurreducens biofilms is likely not limited by conductivity; (3) accurate intrabiofilm diffusion coefficient values are critical for current generation predictions; and (4) the local biofilm potential and redox potential are two distinct parameters and cannot be assumed to have identical values. Finally, we determined that simulated cyclic and squarewave voltammetry based on our model are currently not capable of determining the specific percentages of extracellular electron transfer mechanisms in a biofilm. The developed model will be a critical tool for designing experiments to explain EET mechanisms.
Collapse
Affiliation(s)
- Ryan Renslow
- The Gene and Linda Voiland School of Chemical Engineering and Bioengineering, Washington State University, 118 Dana Hall Spokane St., P.O. Box 642710, Pullman, WA 99164-2710, USA.
| | | | | | | | | | | | | |
Collapse
|
45
|
Wang H, Wang G, Ling Y, Qian F, Song Y, Lu X, Chen S, Tong Y, Li Y. High power density microbial fuel cell with flexible 3D graphene-nickel foam as anode. NANOSCALE 2013; 5:10283-90. [PMID: 24057049 DOI: 10.1039/c3nr03487a] [Citation(s) in RCA: 97] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
The structure and electrical conductivity of anode play a significant role in the power generation of microbial fuel cells (MFCs). In this study, we developed a three-dimensional (3D) reduced graphene oxide-nickel (denoted as rGO-Ni) foam as an anode for MFC through controlled deposition of rGO sheets onto the nickel foam substrate. The loading amount of rGO sheets and electrode surface area can be controlled by the number of rGO loading cycles. 3D rGO-Ni foam anode provides not only a large accessible surface area for microbial colonization and electron mediators, but also a uniform macro-porous scaffold for effective mass diffusion of the culture medium. Significantly, at a steady state of the power generation, the MFC device with flexible rGO-Ni electrodes produced an optimal volumetric power density of 661 W m(-3) calculated based on the volume of anode material, or 27 W m(-3) based on the volume of the anode chamber. These values are substantially higher than that of plain nickel foam, and other conventional carbon based electrodes (e.g., carbon cloth, carbon felt, and carbon paper) measured in the same conditions. To our knowledge, this is the highest volumetric power density reported for mL-scale MFC device with a pure strain of Shewanella oneidensis MR-1. We also demonstrated that the MFC device can be operated effectively in a batch-mode at least for a week. These new 3D rGO-Ni electrodes show great promise for improving the power generation of MFC devices.
Collapse
Affiliation(s)
- Hanyu Wang
- Department of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, USA.
| | | | | | | | | | | | | | | | | |
Collapse
|
46
|
A paper-based microbial fuel cell: Instant battery for disposable diagnostic devices. Biosens Bioelectron 2013; 49:410-4. [DOI: 10.1016/j.bios.2013.06.001] [Citation(s) in RCA: 115] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2013] [Revised: 05/14/2013] [Accepted: 06/01/2013] [Indexed: 11/21/2022]
|
47
|
Kipf E, Koch J, Geiger B, Erben J, Richter K, Gescher J, Zengerle R, Kerzenmacher S. Systematic screening of carbon-based anode materials for microbial fuel cells with Shewanella oneidensis MR-1. BIORESOURCE TECHNOLOGY 2013; 146:386-392. [PMID: 23954244 DOI: 10.1016/j.biortech.2013.07.076] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2013] [Revised: 07/10/2013] [Accepted: 07/12/2013] [Indexed: 06/02/2023]
Abstract
We present a systematic screening of carbon-based anode materials for microbial fuel cells with Shewanella oneidensis MR-1. Under anoxic conditions nanoporous activated carbon cloth is a superior anode material in terms of current density normalized to the projected anode area and anode volume (24.0±0.3 μA cm(-2) and 482±7 μA cm(-3) at -0.2 vs. SCE, respectively). The good performance can be attributed to the high specific surface area of the material, which is available for mediated electron transfer through self-secreted flavins. Under aerated conditions no influence of the specific surface area is observed, which we attribute to a shift from primary indirect electron transfer by mediators to direct electron transfer via adherent cells. Furthermore, we show that an aerated initial growth phase enhances the current density under subsequent anoxic conditions fivefold when compared to a similar experiment that was conducted under permanently anoxic conditions.
Collapse
Affiliation(s)
- Elena Kipf
- Laboratory for MEMS Applications, IMTEK - Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany.
| | - Julia Koch
- Laboratory for MEMS Applications, IMTEK - Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany
| | - Bettina Geiger
- Laboratory for MEMS Applications, IMTEK - Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany
| | - Johannes Erben
- Laboratory for MEMS Applications, IMTEK - Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany.
| | - Katrin Richter
- Institute for Applied Biosciences, Department of Applied Biology, Karlsruhe Institute of Technology, Fritz-Haber-Weg 2, 76131 Karlsruhe, Germany.
| | - Johannes Gescher
- Institute for Applied Biosciences, Department of Applied Biology, Karlsruhe Institute of Technology, Fritz-Haber-Weg 2, 76131 Karlsruhe, Germany.
| | - Roland Zengerle
- Laboratory for MEMS Applications, IMTEK - Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany; BIOSS - Centre for Biological Signalling Studies, University of Freiburg, 79110 Freiburg, Germany.
| | - Sven Kerzenmacher
- Laboratory for MEMS Applications, IMTEK - Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany.
| |
Collapse
|
48
|
Elmekawy A, Hegab HM, Dominguez-Benetton X, Pant D. Internal resistance of microfluidic microbial fuel cell: challenges and potential opportunities. BIORESOURCE TECHNOLOGY 2013; 142:672-82. [PMID: 23747174 DOI: 10.1016/j.biortech.2013.05.061] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2013] [Revised: 05/15/2013] [Accepted: 05/16/2013] [Indexed: 05/20/2023]
Abstract
The efficiency of microbial fuel cells (MFCs) is affected by several factors such as activation overpotentials, ohmic losses and concentration polarization. These factors are handled in micro-sized MFCs using special electrodes with physically or chemically modified surfaces constructed with specified materials. Most of the existing μLscale MFCs show great potential in rapid screening of electrochemically-active microbes and electrode performance; although they generate significantly lower volumetric power density compared with their mL counterparts because of their high internal resistance. This review presents the development of microfluidic MFCs, with summarization of their advantages and challenges, and focuses on the efforts done to minimize the adverse effects of internal resistance (ohmic and non-ohmic) on their performance.
Collapse
Affiliation(s)
- Ahmed Elmekawy
- Separation and Conversion Technologies, VITO-Flemish Institute for Technological Research, Boeretang 200, 2400 Mol, Belgium.
| | | | | | | |
Collapse
|
49
|
Extracellular electron transfer to Fe(III) oxides by the hyperthermophilic archaeon Geoglobus ahangari via a direct contact mechanism. Appl Environ Microbiol 2013; 79:4694-700. [PMID: 23728807 DOI: 10.1128/aem.01566-13] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
The microbial reduction of Fe(III) plays an important role in the geochemistry of hydrothermal systems, yet it is poorly understood at the mechanistic level. Here we show that the obligate Fe(III)-reducing archaeon Geoglobus ahangari uses a direct-contact mechanism for the reduction of Fe(III) oxides to magnetite at 85°C. Alleviating the need to directly contact the mineral with the addition of a chelator or the electron shuttle anthraquinone-2,6-disulfonate (AQDS) stimulated Fe(III) reduction. In contrast, entrapment of the oxides within alginate beads to prevent cell contact with the electron acceptor prevented Fe(III) reduction and cell growth unless AQDS was provided. Furthermore, filtered culture supernatant fluids had no effect on Fe(III) reduction, ruling out the secretion of an endogenous mediator too large to permeate the alginate beads. Consistent with a direct contact mechanism, electron micrographs showed cells in intimate association with the Fe(III) mineral particles, which once dissolved revealed abundant curled appendages. The cells also produced several heme-containing proteins. Some of them were detected among proteins sheared from the cell's outer surface and were required for the reduction of insoluble Fe(III) oxides but not for the reduction of the soluble electron acceptor Fe(III) citrate. The results thus support a mechanism in which the cells directly attach and transfer electrons to the Fe(III) oxides using redox-active proteins exposed on the cell surface. This strategy confers on G. ahangari a competitive advantage for accessing and reducing Fe(III) oxides under the extreme physical and chemical conditions of hot ecosystems.
Collapse
|
50
|
Feng Y, Kayode O, Harper WF. Using microbial fuel cell output metrics and nonlinear modeling techniques for smart biosensing. THE SCIENCE OF THE TOTAL ENVIRONMENT 2013; 449:223-228. [PMID: 23428752 DOI: 10.1016/j.scitotenv.2013.01.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2012] [Revised: 12/12/2012] [Accepted: 01/01/2013] [Indexed: 06/01/2023]
Abstract
Microbial fuel cells (MFCs) are promising tools for water quality monitoring but the response peaks have not been characterized and the data processing methods require improvement. In this study MFC-based biosensing was integrated with two nonlinear programming methods, artificial neural networks (ANN) and time series analysis (TSA). During laboratory testing, the MFCs generated well-organized normally-distributed peaks when the influent chemical oxygen demand (COD) was 150 mg/L or less, and multi-peak signals when the influent COD was 200 mg/L. The area under the response peak correlated well with the influent COD concentration. During field testing, we observed normally-distributed and multi-peak profiles at low COD concentrations. The ANN predicted the COD concentration without error with just one layer of hidden neurons, and the TSA model predicted the temporal trends present in properly functioning MFCs and in a device that was gradually failing. This report is the first to integrate ANN and TSA with MFC-based biosensing.
Collapse
Affiliation(s)
- Yinghua Feng
- Department of Civil and Environmental Engineering, University of Pittsburgh, Swanson School of Engineering, 3700 O'Hara St., Pittsburgh, PA 15261, USA
| | | | | |
Collapse
|