1
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Day JJ, Steell EM, Vigliotta TR, Withey LA, Bills R, Friel JP, Genner MJ, Stiassny MLJ. Exceptional levels of species discovery ameliorate inferences of the biogeography and diversification of an Afrotropical catfish family. Mol Phylogenet Evol 2023; 182:107754. [PMID: 36906193 DOI: 10.1016/j.ympev.2023.107754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 02/24/2023] [Accepted: 03/05/2023] [Indexed: 03/13/2023]
Abstract
Endeavours in species discovery, particularly the characterisation of cryptic species, have been greatly aided by the application of DNA molecular sequence data to phylogenetic reconstruction and inference of evolutionary and biogeographic processes. However, the extent of cryptic and undescribed diversity remains unclear in tropical freshwaters, where biodiversity is declining at alarming rates. To investigate how data on previously undiscovered biodiversity impacts inferences of biogeography and diversification dynamics, we generated a densely sampled species-level family tree of Afrotropical Mochokidae catfishes (220 valid species) that was ca. 70 % complete. This was achieved through extensive continental sampling specifically targeting the genus Chiloglanis a specialist of the relatively unexplored fast-flowing lotic habitat. Applying multiple species-delimitation methods, we report exceptional levels of species discovery for a vertebrate genus, conservatively delimiting a staggering ca. 50 putative new Chiloglanis species, resulting in a near 80 % increase in species richness for the genus. Biogeographic reconstructions of the family identified the Congo Basin as a critical region in the generation of mochokid diversity, and further revealed complex scenarios for the build-up of continental assemblages of the two most species rich mochokid genera, Synodontis and Chiloglanis. While Syndontis showed most divergence events within freshwater ecoregions consistent with largely in situ diversification, Chiloglanis showed much less aggregation of freshwater ecoregions, suggesting dispersal as a key diversification process in this older group. Despite the significant increase in mochokid diversity identified here, diversification rates were best supported by a constant rate model consistent with patterns in many other tropical continental radiations. While our findings highlight fast-flowing lotic freshwaters as potential hotspots for undescribed and cryptic species diversity, a third of all freshwater fishes are currently threatened with extinction, signifying an urgent need to increase exploration of tropical freshwaters to better characterise and conserve its biodiversity.
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Affiliation(s)
- Julia J Day
- Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, UK.
| | - Elizabeth M Steell
- Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, UK
| | - Thomas R Vigliotta
- Department of Ichthyology, American Museum of Natural History, New York, NY, USA
| | - Lewis A Withey
- Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, UK
| | - Roger Bills
- South African Institute for Aquatic Biodiversity, Private Bag, 1015, 6140 Grahamstown, South Africa
| | - John P Friel
- Alabama Museum of Natural History, The University of Alabama, Box 870340, 35487-0340 Tuscaloosa, AL, USA
| | - Martin J Genner
- School of Biological Sciences, University of Bristol, Life Sciences Building, 24, Tyndall Avenue, Bristol BS8 1TQ, UK
| | - Melanie L J Stiassny
- Department of Ichthyology, American Museum of Natural History, New York, NY, USA
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2
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Fouquet A, Réjaud A, Rodrigues MT, Ron SR, Chaparro JC, Osorno M, Werneck FP, Hrbek T, Lima AP, Camacho-Badani T, Jaramillo-Martinez AF, Chave J. Diversification of the Pristimantis conspicillatus group (Anura: Craugastoridae) within distinct neotropical areas throughout the Neogene. SYST BIODIVERS 2022. [DOI: 10.1080/14772000.2022.2130464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Antoine Fouquet
- Laboratoire Evolution et Diversité Biologique, UMR 5174, CNRS, IRD, Université Paul Sabatier, Bâtiment 4R1, 118 Route de Narbonne, Toulouse, 31077, France
| | - Alexandre Réjaud
- Laboratoire Evolution et Diversité Biologique, UMR 5174, CNRS, IRD, Université Paul Sabatier, Bâtiment 4R1, 118 Route de Narbonne, Toulouse, 31077, France
| | - Miguel T. Rodrigues
- Departamento de Zoologia, Universidade de São Paulo Instituto de Biociências, São Paulo, SP, Brazil
| | - Santiago R. Ron
- Museo de Zoología, Escuela de Biología, Pontificia Universidad Católica del Ecuador, Quito, Ecuador
| | - Juan C. Chaparro
- Museo de Biodiversidad del Perú, Urbanización Mariscal Gamarra A-61, Zona 2, Cusco, Peru
- Museo de Historia Natural de la Universidad Nacional de San Antonio Abad del Cusco, Paraninfo Universitario (Plaza de Armas s/n), Cusco, Perú
| | - Mariela Osorno
- Instituto Amazónico de Investigaciones Científicas SINCHI, Sede enlace. Calle 20 # 5-44, Bogotá, Colombia
| | - Fernanda P. Werneck
- Instituto Nacional de Pesquisas da Amazônia, Coordenação de Biodiversidade, Avenida André Araújo 2936, Manaus, 69080-971, AM, Brazil
| | - Tomas Hrbek
- Departamento de Genética, Instituto de Ciências Biológicas, Universidade Federal do Amazonas, Manaus, 69080-900, AM, Brazil
| | - Albertina P. Lima
- Instituto Nacional de Pesquisas da Amazônia, Coordenação de Biodiversidade, Avenida André Araújo 2936, Manaus, 69080-971, AM, Brazil
| | | | - Andres F. Jaramillo-Martinez
- Laboratório de Sistemática de Vertebrados, Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Av. Ipiranga 6681, Prédio 40, sala 110, Porto Alegre, 90619-900, RS, Brazil
| | - Jérôme Chave
- Laboratoire Evolution et Diversité Biologique, UMR 5174, CNRS, IRD, Université Paul Sabatier, Bâtiment 4R1, 118 Route de Narbonne, Toulouse, 31077, France
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3
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Wainwright JB, Montgomery SH. Neuroanatomical shifts mirror patterns of ecological divergence in three diverse clades of mimetic butterflies. Evolution 2022; 76:1806-1820. [PMID: 35767896 PMCID: PMC9540801 DOI: 10.1111/evo.14547] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Revised: 05/30/2022] [Accepted: 06/06/2022] [Indexed: 01/22/2023]
Abstract
Microhabitat partitioning in heterogenous environments can support more diverse communities but may expose partitioned species to distinct perceptual challenges. Divergence across microhabitats could therefore lead to local adaptation to contrasting sensory conditions across small spatial scales, but this aspect of community structuring is rarely explored. Diverse communities of ithomiine butterflies provide an example where closely related species partition tropical forests, where shifts in mimetic coloration are tightly associated with shifts in habitat preference. We test the hypothesis that these mimetic and ecological shifts are associated with distinct patterns of sensory neural investment by comparing brain structure across 164 individuals of 16 species from three ithomiine clades. We find distinct brain morphologies between Oleriina and Hypothyris, which are mimetically homogenous and occupy a single microhabitat. Oleriina, which occurs in low-light microhabitats, invests less in visual brain regions than Hypothyris, with one notable exception, Hyposcada anchiala, the only Oleriina sampled to have converged on mimicry rings found in Hypothyris. We also find that Napeogenes, which has diversified into a range of mimicry rings, shows intermediate patterns of sensory investment. We identify flight height as a critical factor shaping neuroanatomical diversity, with species that fly higher in the canopy investing more in visual structures. Our work suggests that the sensory ecology of species may be impacted by, and interact with, the ways in which communities of closely related organisms are adaptively assembled.
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4
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Dissecting a Geographical Colourful Tapestry: Phylogeography of the Colour Polymorphic Spider Gasteracantha cancriformis. J ZOOL SYST EVOL RES 2022. [DOI: 10.1155/2022/8112945] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Species with large distributions provide unique opportunities to test how geography has influenced biotic diversification. In this work, we aimed to explore the effect of geographic barriers on the distribution of the phenotypic and genetic variation of a spider species that is widespread in continental and insular America. We obtained an alignment of the mitochondrial locus Cytochrome Oxidase I (COI) for 408 individuals across the geographic range of Gasteracantha cancriformis. We used phylogenetics, population genetics, and morphology to explore the genetic and phenotypic variation of this species. We found five genetically differentiated and geographically structured populations. Three of them are distributed in continental America, separated by the Andes mountains, and two are in the Caribbean and Galapagos Islands. Some of these geographic clades shared haplotypes between them, which may be a consequence of dispersal. We detected at least 20 phenotypes of G. cancriformis, some of which were exclusive to a geographic region, while others occurred in multiple regions. We did not observe well-defined morphological differences across male genitalia. This evidence suggests that G. cancriformis is a widespread species with high phenotypic variation that should be explored in more depth.
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5
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Li X, Hamilton CA, St Laurent R, Ballesteros-Mejia L, Markee A, Haxaire J, Rougerie R, Kitching IJ, Kawahara AY. A diversification relay race from Caribbean-Mesoamerica to the Andes: historical biogeography of Xylophanes hawkmoths. Proc Biol Sci 2022; 289:20212435. [PMID: 35135350 PMCID: PMC8826137 DOI: 10.1098/rspb.2021.2435] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022] Open
Abstract
The regions of the Andes and Caribbean-Mesoamerica are both hypothesized to be the cradle for many Neotropical lineages, but few studies have fully investigated the dynamics and interactions between Neotropical bioregions. The New World hawkmoth genus Xylophanes is the most taxonomically diverse genus in the Sphingidae, with the highest endemism and richness in the Andes and Caribbean-Mesoamerica. We integrated phylogenomic and DNA barcode data and generated the first time-calibrated tree for this genus, covering 93.8% of the species diversity. We used event-based likelihood ancestral area estimation and biogeographic stochastic mapping to examine the speciation and dispersal dynamics of Xylophanes across bioregions. We also used trait-dependent diversification models to compare speciation and extinction rates of lineages associated with different bioregions. Our results indicate that Xylophanes originated in Caribbean-Mesoamerica in the Late Miocene, and immediately diverged into five major clades. The current species diversity and distribution of Xylophanes can be explained by two consecutive phases. In the first phase, the highest Xylophanes speciation and emigration rates occurred in the Caribbean-Mesoamerica, and the highest immigration rates occurred in the Andes, whereas in the second phase the highest immigration rates were found in Amazonia, and the Andes had the highest speciation and emigration rates.
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Affiliation(s)
- Xuankun Li
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
| | - Chris A Hamilton
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.,Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID 83844, USA
| | - Ryan St Laurent
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.,Smithsonian National Museum of Natural History, Department of Entomology, Washington, DC 20560, USA
| | - Liliana Ballesteros-Mejia
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France.,CESAB, Centre de Synthèse et d'Analyse sur la Biodiversité, Montpellier, France
| | - Amanda Markee
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
| | - Jean Haxaire
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - Rodolphe Rougerie
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - Ian J Kitching
- Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Akito Y Kawahara
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.,Department of Biology, University of Florida, Gainesville, FL 32611, USA.,Entomology and Nematology Department, University of Florida, Gainesville, FL 32608, USA
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6
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Doré M, Willmott K, Leroy B, Chazot N, Mallet J, Freitas AVL, Hall JPW, Lamas G, Dasmahapatra KK, Fontaine C, Elias M. Anthropogenic pressures coincide with Neotropical biodiversity hotspots in a flagship butterfly group. DIVERS DISTRIB 2021. [DOI: 10.1111/ddi.13455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Affiliation(s)
- Maël Doré
- Institut de Systématique, Evolution, Biodiversité MNHN‐CNRS‐Sorbonne Université‐EPHE‐Université des AntillesMuséum national d’Histoire naturelle de Paris Paris France
- Centre d’Ecologie et des Sciences de la Conservation UMR 7204 MNHN‐CNRS‐Sorbonne Université Muséum national d’Histoire naturelle de Paris Paris France
| | - Keith Willmott
- McGuire Center for Lepidoptera and Biodiversity Florida Museum of Natural History University of Florida Gainesville Florida USA
| | - Boris Leroy
- Unité Biologie des Organismes et Ecosystèmes Aquatiques (BOREA UMR 7208) Muséum National d’Histoire Naturelle Sorbonne UniversitésUniversité de Caen NormandieUniversité des AntillesCNRSIRD Paris France
| | - Nicolas Chazot
- Swedish University of Agricultural Sciences Uppsala Sweden
| | - James Mallet
- Dept of Organismic and Evolutionary Biology Harvard University Cambridge Massachusetts USA
| | - André V. L. Freitas
- Departamento de Biologia Animal and Museu da Biodiversidade Instituto de Biologia Universidade Estadual de Campinas São Paulo Brazil
| | - Jason P. W. Hall
- Department of Entomology National Museum of Natural History Smithsonian Institution Washington District of Columbia USA
| | - Gerardo Lamas
- Museo de Historia Natural Universidad Nacional Mayor de San Marcos Lima Peru
| | | | - Colin Fontaine
- Centre d’Ecologie et des Sciences de la Conservation UMR 7204 MNHN‐CNRS‐Sorbonne Université Muséum national d’Histoire naturelle de Paris Paris France
| | - Marianne Elias
- Institut de Systématique, Evolution, Biodiversité MNHN‐CNRS‐Sorbonne Université‐EPHE‐Université des AntillesMuséum national d’Histoire naturelle de Paris Paris France
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7
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Piron-Prunier F, Persyn E, Legeai F, McClure M, Meslin C, Robin S, Alves-Carvalho S, Mohammad A, Blugeon C, Jacquin-Joly E, Montagné N, Elias M, Gauthier J. Comparative transcriptome analysis at the onset of speciation in a mimetic butterfly-The Ithomiini Melinaea marsaeus. J Evol Biol 2021; 34:1704-1721. [PMID: 34570954 DOI: 10.1111/jeb.13940] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 08/16/2021] [Accepted: 09/03/2021] [Indexed: 11/28/2022]
Abstract
Ecological speciation entails divergent selection on specific traits and ultimately on the developmental pathways responsible for these traits. Selection can act on gene sequences but also on regulatory regions responsible for gene expression. Mimetic butterflies are a relevant system for speciation studies because wing colour pattern (WCP) often diverges between closely related taxa and is thought to drive speciation through assortative mating and increased predation on hybrids. Here, we generate the first transcriptomic resources for a mimetic butterfly of the tribe Ithomiini, Melinaea marsaeus, to examine patterns of differential expression between two subspecies and between tissues that express traits that likely drive reproductive isolation; WCP and chemosensory genes. We sequenced whole transcriptomes of three life stages to cover a large catalogue of transcripts, and we investigated differential expression between subspecies in pupal wing discs and antennae. Eighteen known WCP genes were expressed in wing discs and 115 chemosensory genes were expressed in antennae, with a remarkable diversity of chemosensory protein genes. Many transcripts were differentially expressed between subspecies, including two WCP genes and one odorant receptor. Our results suggest that in M. marsaeus the same genes as in other mimetic butterflies are involved in traits causing reproductive isolation, and point at possible candidates for the differences in those traits between subspecies. Differential expression analyses of other developmental stages and body organs and functional studies are needed to confirm and expand these results. Our work provides key resources for comparative genomics in mimetic butterflies, and more generally in Lepidoptera.
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Affiliation(s)
- Florence Piron-Prunier
- Institut de Systématique, Evolution, Biodiversité, MNHN, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - Emma Persyn
- Institute of Ecology and Environmental Sciences of Paris, Sorbonne Université, INRAE, CNRS, IRD, UPEC, Université de Paris, Paris, France
| | - Fabrice Legeai
- BIPAA, IGEPP, INRAE, Institut Agro, Univ Rennes, Rennes, France.,Univ Rennes, INRIA, CNRS, IRISA, Rennes, France
| | - Melanie McClure
- Institut de Systématique, Evolution, Biodiversité, MNHN, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France.,Laboratoire Écologie, Évolution,Interactions des Systèmes Amazoniens (LEEISA), Université de Guyane, CNRS, IFREMER, Cayenne, France
| | - Camille Meslin
- Institute of Ecology and Environmental Sciences of Paris, Sorbonne Université, INRAE, CNRS, IRD, UPEC, Université de Paris, Paris, France
| | - Stéphanie Robin
- BIPAA, IGEPP, INRAE, Institut Agro, Univ Rennes, Rennes, France.,Univ Rennes, INRIA, CNRS, IRISA, Rennes, France
| | | | - Ammara Mohammad
- Département de Biologie, Genomics Core Facility, Institut de Biologie de l'ENS (IBENS), École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
| | - Corinne Blugeon
- Département de Biologie, Genomics Core Facility, Institut de Biologie de l'ENS (IBENS), École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
| | - Emmanuelle Jacquin-Joly
- Institute of Ecology and Environmental Sciences of Paris, Sorbonne Université, INRAE, CNRS, IRD, UPEC, Université de Paris, Paris, France
| | - Nicolas Montagné
- Institute of Ecology and Environmental Sciences of Paris, Sorbonne Université, INRAE, CNRS, IRD, UPEC, Université de Paris, Paris, France
| | - Marianne Elias
- Institut de Systématique, Evolution, Biodiversité, MNHN, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - Jérémy Gauthier
- Univ Rennes, INRIA, CNRS, IRISA, Rennes, France.,Geneva Natural History Museum, Geneva, Switzerland
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8
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Chazot N, Blandin P, Debat V, Elias M, Condamine FL. Punctuational ecological changes rather than global factors drive species diversification and the evolution of wing phenotypes in Morpho butterflies. J Evol Biol 2021; 34:1592-1607. [PMID: 34449944 DOI: 10.1111/jeb.13921] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2017] [Revised: 08/10/2021] [Accepted: 08/10/2021] [Indexed: 11/30/2022]
Abstract
Assessing the relative importance of geographical and ecological drivers of evolution is paramount to understand the diversification of species and traits at the macroevolutionary scale. Here, we use an integrative approach, combining phylogenetics, biogeography, ecology and quantified phenotypes to investigate the drivers of both species and phenotypic diversification of the iconic Neotropical butterfly genus Morpho. We generated a time-calibrated phylogeny for all known species and inferred historical biogeography. We fitted models of time-dependent (accounting for rate heterogeneity across the phylogeny) and paleoenvironment-dependent diversification (accounting for global effect on the phylogeny). We used geometric morphometrics to assess variation of wing size and shape across the tree and investigated their dynamics of evolution. We found that the diversification of Morpho is best explained when considering variable diversification rates across the tree, possibly associated with lineages occupying different microhabitat conditions. First, a shift from understory to canopy was characterized by an increased speciation rate partially coupled with an increasing rate of wing shape evolution. Second, the occupation of dense bamboo thickets accompanying a major host-plant shift from dicotyledons towards monocotyledons was associated with a simultaneous diversification rate shift and an evolutionary 'jump' of wing size. Our study points to a diversification pattern driven by punctuational ecological changes instead of a global driver or biogeographic history.
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Affiliation(s)
- Nicolas Chazot
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Patrick Blandin
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, UA, Paris, France
| | - Vincent Debat
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, UA, Paris, France
| | - Marianne Elias
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, UA, Paris, France
| | - Fabien L Condamine
- CNRS, UMR 5554, Institut des Sciences de l'Evolution, Université de Montpellier, Montpellier, France
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9
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García-Rodríguez A, Martínez PA, Oliveira BF, Velasco JA, Pyron RA, Costa GC. Amphibian Speciation Rates Support a General Role of Mountains as Biodiversity Pumps. Am Nat 2021; 198:E68-E79. [PMID: 34403310 DOI: 10.1086/715500] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractContinental mountain areas cover <15% of global land surface, yet these regions concentrate >80% of global terrestrial diversity. One prominent hypothesis to explain this pattern proposes that high mountain diversities could be explained by higher diversification rates in regions of high topographic complexity (HTC). While high speciation in mountains has been detected for particular clades and regions, the global extent to which lineages experience faster speciation in mountains remains unknown. Here we addressed this issue using amphibians as a model system (>7,000 species), and we found that families showing high speciation rates contain a high proportion of species distributed in mountains. Moreover, we found that lineages inhabiting areas of HTC speciate faster than lineages occupying areas that are topographically less complex. When comparing across regions, we identified the same pattern in five biogeographical realms where higher speciation rates are associated with higher levels of complex topography. Low-magnitude differences in speciation rates between some low and high complex topographies suggest that high mountain diversity is also affected by low extinction and/or high colonization rates. Nevertheless, our results bolster the importance of mountains as engines of speciation at different geographical scales and highlight their importance for the conservation of global biodiversity.
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10
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Matos-Maraví P, Wahlberg N, Freitas AVL, Devries P, Antonelli A, Penz CM. Mesoamerica is a cradle and the Atlantic Forest is a museum of Neotropical butterfly diversity: insights from the evolution and biogeography of Brassolini (Lepidoptera: Nymphalidae). Biol J Linn Soc Lond 2021. [DOI: 10.1093/biolinnean/blab034] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
Abstract
Regional species diversity is explained ultimately by speciation, extinction and dispersal. Here, we estimate dispersal and speciation rates of Neotropical butterflies to propose an explanation for the distribution and diversity of extant species. We focused on the tribe Brassolini (owl butterflies and allies), a Neotropical group that comprises 17 genera and 108 species, most of them endemic to rainforest biomes. We inferred a robust species tree using the multispecies coalescent framework and a dataset including molecular and morphological characters. This formed the basis for three changes in Brassolini classification: (1) Naropina syn. nov. is subsumed within Brassolina; (2) Aponarope syn. nov. is subsumed within Narope; and (3) Selenophanes orgetorix comb. nov. is reassigned from Catoblepia to Selenophanes. By applying biogeographical stochastic mapping, we found contrasting species diversification and dispersal dynamics across rainforest biomes, which might be explained, in part, by the geological and environmental history of each bioregion. Our results revealed a mosaic of biome-specific evolutionary histories within the Neotropics, where butterfly species have diversified rapidly (cradles: Mesoamerica), have accumulated gradually (museums: Atlantic Forest) or have diversified and accumulated alternately (Amazonia). Our study contributes evidence from a major butterfly lineage that the Neotropics are a museum and a cradle of species diversity.
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Affiliation(s)
- Pável Matos-Maraví
- Department of Biological and Environmental Sciences, University of Gothenburg, Carl Skottsbergs gata 22B, 41319 Gothenburg, Sweden
- Gothenburg Global Biodiversity Centre, Carl Skottsbergs gata 22B, 41319 Gothenburg, Sweden
- Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Branišovská 1160/31, 37005 České Budějovice, Czech Republic
| | - Niklas Wahlberg
- Department of Biology, Lund University, Sölvegatan 37, 22362 Lund, Sweden
| | - André V L Freitas
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, Rua Monteiro Lobato 255, CEP 13.083-862 Campinas, São Paulo, Brazil
| | - Phil Devries
- Department of Biological Sciences, University of New Orleans, 2000 Lakeshore Drive, New Orleans, LA 70148, USA
- Courtesy Curators of Lepidoptera, Florida Museum of Natural History, 1659 Museum Road, Gainesville, FL 32611, USA
| | - Alexandre Antonelli
- Department of Biological and Environmental Sciences, University of Gothenburg, Carl Skottsbergs gata 22B, 41319 Gothenburg, Sweden
- Gothenburg Global Biodiversity Centre, Carl Skottsbergs gata 22B, 41319 Gothenburg, Sweden
- Royal Botanical Gardens Kew, Richmond TW9 3AE, UK
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK
| | - Carla M Penz
- Department of Biological Sciences, University of New Orleans, 2000 Lakeshore Drive, New Orleans, LA 70148, USA
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11
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Marín MA, López-Rubio A, Clavijo A, Pyrcz TW, Freitas AVL, Uribe SI, Álvarez CF. Use of species delimitation approaches to tackle the cryptic diversity of an assemblage of high Andean butterflies (Lepidoptera: Papilionoidea). Genome 2021; 64:937-949. [PMID: 33596120 DOI: 10.1139/gen-2020-0100] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Cryptic biological diversity has generated ambiguity in taxonomic and evolutionary studies. Single-locus methods and other approaches for species delimitation are useful for addressing this challenge, enabling the practical processing of large numbers of samples for identification and inventory purposes. This study analyzed an assemblage of high Andean butterflies using DNA barcoding and compared the identifications based on the current morphological taxonomy with three methods of species delimitation (automatic barcode gap discovery, generalized mixed Yule coalescent model, and Poisson tree processes). Sixteen potential cryptic species were recognized using these three methods, representing a net richness increase of 11.3% in the assemblage. A well-studied taxon of the genus Vanessa, which has a wide geographical distribution, appeared with the potential cryptic species that had a higher genetic differentiation at the local level than at the continental level. The analyses were useful for identifying the potential cryptic species in Pedaliodes and Forsterinaria complexes, which also show differentiation along altitudinal and latitudinal gradients. This genetic assessment of an entire assemblage of high Andean butterflies (Papilionoidea) provides baseline information for future research in a region characterized by high rates of endemism and population isolation.
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Affiliation(s)
- Mario Alejandro Marín
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo (SP), Brazil.,Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Medellín, Antioquia, Colombia
| | - Andrés López-Rubio
- Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Medellín, Antioquia, Colombia
| | - Alejandra Clavijo
- Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Medellín, Antioquia, Colombia
| | - Tomasz Wilhelm Pyrcz
- Department of Invertebrate Evolution, Institute of Zoology and Biomedical Research, Jagiellonian University, Gronostajowa, Kraków, Poland.,Nature Education Centre, Jagiellonian University, Gronostajowa, Kraków, Poland
| | - André Victor Lucci Freitas
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo (SP), Brazil.,Museu de Diversidade Biológica, Instituto de Biologia, Universidade Estadual de Campinas, São Paulo, Brazil
| | - Sandra Inés Uribe
- Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Medellín, Antioquia, Colombia
| | - Carlos Federico Álvarez
- Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Medellín, Antioquia, Colombia
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12
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Ortiz‐Acevedo E, Gomez JP, Espeland M, Toussaint EFA, Willmott KR. The roles of wing color pattern and geography in the evolution of Neotropical Preponini butterflies. Ecol Evol 2020; 10:12801-12816. [PMID: 33304495 PMCID: PMC7713932 DOI: 10.1002/ece3.6816] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Revised: 08/10/2020] [Accepted: 08/11/2020] [Indexed: 11/20/2022] Open
Abstract
Diversification rates and evolutionary trajectories are known to be influenced by phenotypic traits and the geographic history of the landscapes that organisms inhabit. One of the most conspicuous traits in butterflies is their wing color pattern, which has been shown to be important in speciation. The evolution of many taxa in the Neotropics has also been influenced by major geological events. Using a dated, species-level molecular phylogenetic hypothesis for Preponini, a colorful Neotropical butterfly tribe, we evaluated whether diversification rates were constant or varied through time, and how they were influenced by color pattern evolution and biogeographical events. We found that Preponini originated approximately 28 million years ago and that diversification has increased through time consistent with major periods of Andean uplift. Even though some clades show evolutionarily rapid transitions in coloration, contrary to our expectations, these shifts were not correlated with shifts in diversification. Involvement in mimicry with other butterfly groups might explain the rapid changes in dorsal color patterns in this tribe, but such changes have not increased species diversification in this group. However, we found evidence for an influence of major Miocene and Pliocene geological events on the tribe's evolution. Preponini apparently originated within South America, and range evolution has since been dynamic, congruent with Andean geologic activity, closure of the Panama Isthmus, and Miocene climate variability.
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Affiliation(s)
- Elena Ortiz‐Acevedo
- Departamento de Química y BiologíaUniversidad del NorteBarranquillaColombia
- Florida Museum of Natural HistoryUniversity of FloridaGainesvilleFLUSA
| | - Juan Pablo Gomez
- Departamento de Química y BiologíaUniversidad del NorteBarranquillaColombia
| | | | | | - Keith R. Willmott
- Florida Museum of Natural HistoryUniversity of FloridaGainesvilleFLUSA
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13
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Patino LH, Muñoz M, Cruz-Saavedra L, Muskus C, Ramírez JD. Genomic Diversification, Structural Plasticity, and Hybridization in Leishmania (Viannia) braziliensis. Front Cell Infect Microbiol 2020; 10:582192. [PMID: 33178631 PMCID: PMC7596589 DOI: 10.3389/fcimb.2020.582192] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Accepted: 09/28/2020] [Indexed: 01/12/2023] Open
Abstract
Leishmania (Viannia) braziliensis is an important Leishmania species circulating in several Central and South American countries. Among Leishmania species circulating in Brazil, Argentina and Colombia, L. braziliensis has the highest genomic variability. However, genomic variability at the whole genome level has been only studied in Brazilian and Peruvian isolates; to date, no Colombian isolates have been studied. Considering that in Colombia, L. braziliensis is a species with great clinical and therapeutic relevance, as well as the role of genetic variability in the epidemiology of leishmaniasis, we analyzed and evaluated intraspecific genomic variability of L. braziliensis from Colombian and Bolivian isolates and compared them with Brazilian isolates. Twenty-one genomes were analyzed, six from Colombian patients, one from a Bolivian patient, and 14 Brazilian isolates downloaded from public databases. The results obtained of Phylogenomic analysis showed the existence of four well-supported clades, which evidenced intraspecific variability. The whole-genome analysis revealed structural variations in the somy, mainly in the Brazilian genomes (clade 1 and clade 3), low copy number variations, and a moderate number of single-nucleotide polymorphisms (SNPs) in all genomes analyzed. Interestingly, the genomes belonging to clades 2 and 3 from Colombia and Brazil, respectively, were characterized by low heterozygosity (~90% of SNP loci were homozygous) and regions suggestive of loss of heterozygosity (LOH). Additionally, we observed the drastic whole genome loss of heterozygosity and possible hybridization events in one genome belonging to clade 4. Unique/shared SNPs between and within the four clades were identified, revealing the importance of some of them in biological processes of L. braziliensis. Our analyses demonstrate high genomic variability of L. braziliensis in different regions of South America, mainly in Colombia and suggest that this species exhibits striking genomic diversity and a capacity of genomic hybridization; additionally, this is the first study to report whole-genome sequences of Colombian L. braziliensis isolates.
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Affiliation(s)
- Luz H Patino
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia
| | - Marina Muñoz
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia
| | - Lissa Cruz-Saavedra
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia
| | - Carlos Muskus
- Programa de Estudio y Control de Enfermedades Tropicales (PECET), Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia
| | - Juan David Ramírez
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, Colombia
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14
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Abstract
Parasites are interesting models for studying speciation processes because they have a high potential for specialization, thanks to the intimate ecological association with their hosts and vectors. Yet little is known about the circumstances under which new parasite lineages emerge. Here we studied the genome diversity of parasites of the Leishmania braziliensis species complex that inhabit both Amazonian and Andean biotas in Peru. We identify three major parasite lineages that occupy particular ecological niches and show that these emerged during forestation changes over the past 150,000 y. We furthermore discovered that meiotic recombination between Amazonian and Andean lineages resulted in full-genome hybrids presenting mixed mitochondrial genomes, providing insights into the genetic consequences of hybridization in parasitic protozoa. The tropical Andes are an important natural laboratory to understand speciation in many taxa. Here we examined the evolutionary history of parasites of the Leishmania braziliensis species complex based on whole-genome sequencing of 67 isolates from 47 localities in Peru. We first show the origin of Andean Leishmania as a clade of near-clonal lineages that diverged from admixed Amazonian ancestors, accompanied by a significant reduction in genome diversity and large structural variations implicated in host–parasite interactions. Within the Andean species, patterns of population structure were strongly associated with biogeographical origin. Molecular clock and ecological niche modeling suggested that the history of diversification of the Andean lineages is limited to the Late Pleistocene and intimately associated with habitat contractions driven by climate change. These results suggest that changes in forestation over the past 150,000 y have influenced speciation and diversity of these Neotropical parasites. Second, genome-scale analyses provided evidence of meiotic-like recombination between Andean and Amazonian Leishmania species, resulting in full-genome hybrids. The mitochondrial genome of these hybrids consisted of homogeneous uniparental maxicircles, but minicircles originated from both parental species. We further show that mitochondrial minicircles—but not maxicircles—show a similar evolutionary pattern to the nuclear genome, suggesting that compatibility between nuclear-encoded mitochondrial genes and minicircle-encoded guide RNA genes is essential to maintain efficient respiration. By comparing full nuclear and mitochondrial genome ancestries, our data expand our appreciation on the genetic consequences of diversification and hybridization in parasitic protozoa.
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15
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Caicedo-Garzón V, Salgado-Roa FC, Sánchez-Herrera M, Hernández C, Arias-Giraldo LM, García L, Vallejo G, Cantillo O, Tovar C, Aristeu da Rosa J, Carrasco HJ, Segovia M, Salazar C, Ramírez JD. Genetic diversification of Panstrongylus geniculatus (Reduviidae: Triatominae) in northern South America. PLoS One 2019; 14:e0223963. [PMID: 31622439 PMCID: PMC6797096 DOI: 10.1371/journal.pone.0223963] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Accepted: 09/17/2019] [Indexed: 11/20/2022] Open
Abstract
Triatomines are the vectors of Trypanosoma cruzi, the etiological agent of Chagas disease. Although Triatoma and Rhodnius are the most-studied vector genera, other triatomines, such as Panstrongylus, also transmit T. cruzi, creating new epidemiological scenarios. Panstrongylus has at least 13 reported species but there is limited information about its intraspecific genetic variation and patterns of diversification. Here, we begin to fill this gap by studying populations of P. geniculatus from Colombia and Venezuela and including other epidemiologically important species from the region. We examined the pattern of diversification of P. geniculatus in Colombia using mitochondrial and nuclear ribosomal data. Genetic diversity and differentiation were calculated within and among populations of P. geniculatus. Moreover, we constructed maximum likelihood and Bayesian inference phylogenies and haplotype networks using P. geniculatus and other species from the genus (P. megistus, P. lignarius, P. lutzi, P. tupynambai, P. chinai, P. rufotuberculatus and P. howardi). Using a coalescence framework, we also dated the P. geniculatus lineages. The total evidence tree showed that P. geniculatus is a monophyletic species, with four clades that are concordant with its geographic distribution and are partly explained by the Andes orogeny. However, other factors, including anthropogenic and eco-epidemiological effects must be investigated to explain the existence of recent geographic P. geniculatus lineages. The epidemiological dynamics in structured vector populations, such as those found here, warrant further investigation. Extending our knowledge of P. geniculatus is necessary for the accurate development of effective strategies for the control of Chagas disease vectors.
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Affiliation(s)
- Valentina Caicedo-Garzón
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Cra. Bogotá D.C., Colombia.,Grupo de Genética Evolutiva, Filogeografía y Ecología de la Biodiversidad Neotropical (GEUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá D.C., Colombia
| | - Fabian C Salgado-Roa
- Grupo de Genética Evolutiva, Filogeografía y Ecología de la Biodiversidad Neotropical (GEUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá D.C., Colombia
| | - Melissa Sánchez-Herrera
- Grupo de Genética Evolutiva, Filogeografía y Ecología de la Biodiversidad Neotropical (GEUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá D.C., Colombia
| | - Carolina Hernández
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Cra. Bogotá D.C., Colombia
| | - Luisa María Arias-Giraldo
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Cra. Bogotá D.C., Colombia
| | - Lineth García
- Universidad Nacional de San Simón, Cochabamba, Bolivia
| | - Gustavo Vallejo
- Laboratorio de Investigaciones en Parasitología Tropical (LIPT), Universidad del Tolima, Ibagué, Colombia
| | - Omar Cantillo
- Laboratorio de Referencia e Investigación en Enfermedades Tropicales, Dirección de Sanidad Ejército, Ejército Nacional de Colombia, Bogotá, Colombia
| | - Catalina Tovar
- Grupo de investigación en Enfermedades Tropicales y Resistencia Bacteriana, Programa de Medicina, Facultad de Ciencias de la Salud, Universidad del Sinú, Montería, Colombia
| | - Joao Aristeu da Rosa
- Laboratório de Parasitologia, Departamento de Ciências Biológicas, Faculdade de Ciências Farmacêuticas, Universidade Estadual Paulista "Júlio de Mesquita Filho" (UNESP), Araraquara, SP, Brasil
| | - Hernán J Carrasco
- Laboratorio de Biología Molecular de Protozoarios, Instituto de Medicina Tropical, Universidad Central de Venezuela, Caracas, Venezuela
| | - Maikell Segovia
- Laboratorio de Biología Molecular de Protozoarios, Instituto de Medicina Tropical, Universidad Central de Venezuela, Caracas, Venezuela
| | - Camilo Salazar
- Grupo de Genética Evolutiva, Filogeografía y Ecología de la Biodiversidad Neotropical (GEUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Bogotá D.C., Colombia
| | - Juan David Ramírez
- Grupo de Investigaciones Microbiológicas-UR (GIMUR), Departamento de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Cra. Bogotá D.C., Colombia
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16
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Muñoz-Tobar SI, Caterino MS. The role of dispersal for shaping phylogeographical structure of flightless beetles from the Andes. PeerJ 2019; 7:e7226. [PMID: 31304068 PMCID: PMC6611450 DOI: 10.7717/peerj.7226] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2019] [Accepted: 05/31/2019] [Indexed: 11/20/2022] Open
Abstract
Background Páramo is a tropical alpine ecosystem present in the northern Andes. Its patchy distribution imposes limits and barriers to specialist inhabitants. We aim to assess the effects of this habitat distribution on divergence across two independently flightless ground beetle lineages, in the genera Dyscolus and Dercylus. Methods One nuclear and one mitochondrial gene from 110 individuals from 10 sites across the two lineages were sequenced and analyzed using a combination of phylogenetics, population genetic analyses, and niche modeling methods. Results The two lineages show different degrees of population subdivision. Low levels of gene flow were found in Dyscolus alpinus, where one dominant haplotype is found in four out of the six populations analyzed for both molecular markers. However, complete population isolation was revealed in species of the genus Dercylus, where high levels of differentiation exist at species and population level for both genes. Maximum entropy models of species in the Dercylus lineage show overlapping distributions. Still, species distributions appear to be restricted to small areas across the Andes. Conclusion Even though both beetle lineages are flightless, the dispersal ability of each beetle lineage appears to influence the genetic diversity across fragmented páramo populations, where Dyscolus alpinus appears to be a better disperser than species in the genus Dercylus.
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Affiliation(s)
- Sofia I Muñoz-Tobar
- Department of Plant & Environmental Sciences, Clemson University, Clemson, SC, USA.,Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Quito, Pichincha, Ecuador
| | - Michael S Caterino
- Department of Plant & Environmental Sciences, Clemson University, Clemson, SC, USA
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17
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Flight over the Proto-Caribbean seaway: Phylogeny and macroevolution of Neotropical Anaeini leafwing butterflies. Mol Phylogenet Evol 2019; 137:86-103. [PMID: 31022515 DOI: 10.1016/j.ympev.2019.04.020] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2018] [Revised: 04/03/2019] [Accepted: 04/19/2019] [Indexed: 11/22/2022]
Abstract
Our understanding of the origin and evolution of the astonishing Neotropical biodiversity remains somewhat limited. In particular, decoupling the respective impacts of biotic and abiotic factors on the macroevolution of clades is paramount to understand biodiversity assemblage in this region. We present the first comprehensive molecular phylogeny for the Neotropical Anaeini leafwing butterflies (Nymphalidae, Charaxinae) and, applying likelihood-based methods, we test the impact of major abiotic (Andean orogeny, Central American highland orogeny, Proto-Caribbean seaway closure, Quaternary glaciations) and biotic (host plant association) factors on their macroevolution. We infer a robust phylogenetic hypothesis for the tribe despite moderate support in some derived clades. Our phylogenetic inference recovers the genus Polygrapha Staudinger, [1887] as polyphyletic, rendering the genera FountaineaRydon, 1971 and Memphis Hübner, [1819] paraphyletic. Consequently, we transfer Polygrapha tyrianthina (Salvin & Godman, 1868) comb. nov. to Fountainea and Polygrapha xenocrates (Westwood, 1850) comb. nov. to Memphis. We infer an origin of the group in the late Eocene ca. 40 million years ago in Central American lowlands which at the time were separated from South America by the Proto-Caribbean seaway. The biogeographical history of the group is very dynamic, with several oversea colonization events from Central America into the Chocó and Andean regions during intense stages of Andean orogeny. These events coincide with the emergence of an archipelagic setting between Central America and northern South America in the mid-Miocene that likely facilitated dispersal across the now-vanished Proto-Caribbean seaway. The Amazonian region also played a central role in the diversification of the Anaeini, acting both as a museum and a cradle of diversity. We recover a diversification rate shift in the Miocene within the species-rich genus Memphis. State speciation and extinction models recover a significant relationship between this rate shift and host plant association, indicating a positive role on speciation rates of a switch between Malpighiales and new plant orders. We find less support for a role of abiotic factors including the progressive Andean orogeny, Proto-Caribbean seaway closure and Quaternary glaciations. Miocene host plant shifts possibly acted in concert with abiotic and/or biotic factors to shape the diversification of Anaeini butterflies.
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18
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Testo WL, Sessa E, Barrington DS. The rise of the Andes promoted rapid diversification in Neotropical Phlegmariurus (Lycopodiaceae). THE NEW PHYTOLOGIST 2019; 222:604-613. [PMID: 30326543 DOI: 10.1111/nph.15544] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 10/10/2018] [Indexed: 06/08/2023]
Abstract
Tropical mountains are disproportionately biodiverse relative to their surface area, but the processes underlying their exceptional diversity require further study. Here, we use comparative phylogenetic methods to examine the impact of the Andean orogeny on the diversification of Neotropical Phlegmariurus, a species-rich lycophyte clade. We generated a time-calibrated phylogeny of 105 species of Neotropical Phlegmariurus and estimated lineage diversification rates. We tested for correlations between lineage diversification rates and species range size, niche breadth, elevational range amplitude, and mean elevation of occurrence. A recently developed macroevolutionary model was used to incorporate geological data and test for an association between diversification rates and the Andean uplift. Diversification rates of Neotropical Phlegmariurus are negatively correlated with species range size and positively correlated with mean elevation of species occurrence. The rise of the Andes is strongly associated with increased rates of diversification in Neotropical Phlegmariurus during the last 10 Myr. Our study demonstrates the importance of mountain-building events and geographical isolation of alpine populations as drivers of rapid diversification, even in spore-dispersed plants. This work also highlights the usefulness of combined phylogenetic, geological and ecological datasets, and the promise of comparative environment-dependent diversification models in better understanding the evolutionary origins of biodiversity.
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Affiliation(s)
- Weston L Testo
- Department of Biology, University of Florida, Box 118525, Gainesville, FL, 32611, USA
| | - Emily Sessa
- Department of Biology, University of Florida, Box 118525, Gainesville, FL, 32611, USA
| | - David S Barrington
- Department of Plant Biology, University of Vermont, 63 Carrigan Drive, Burlington, VT, 05405, USA
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19
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Aguiar AJ. New species ofNasutopediafrom cloud forests of the Neotropical region (Hymenoptera: Apidae: Tapinotaspidini). J NAT HIST 2018. [DOI: 10.1080/00222933.2018.1527962] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Antonio J.C. Aguiar
- Departamento de Zoologia, Universidade de Brasília, Instituto de Ciências Biológicas, Brasília, DF, Brazil
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20
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Waddell EH, Crotti M, Lougheed SC, Cannatella DC, Elmer KR. Hierarchies of evolutionary radiation in the world’s most species rich vertebrate group, the Neotropical Pristimantis leaf litter frogs. SYST BIODIVERS 2018. [DOI: 10.1080/14772000.2018.1503202] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Emily H. Waddell
- Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
- Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK
- Centre for Ecology and Hydrology, Bush Estate, Penicuik, EH26 0QB, UK
| | - Marco Crotti
- Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Stephen C. Lougheed
- Department of Biology, Queen's University, Kingston, Ontario K7L 3N6, Canada
| | - David C. Cannatella
- Section of Integrative Biology and Texas Memorial Museum, University of Texas, Austin, TX 78712, USA
| | - Kathryn R. Elmer
- Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
- Department of Biology, Queen's University, Kingston, Ontario K7L 3N6, Canada
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21
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Ye Z, Damgaard J, Burckhardt D, Gibbs G, Yuan J, Yang H, Bu W. Phylogeny and historical biogeography of Gondwanan moss-bugs (Insecta: Hemiptera: Coleorrhyncha: Peloridiidae). Cladistics 2018; 35:135-149. [DOI: 10.1111/cla.12237] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/13/2018] [Indexed: 11/29/2022] Open
Affiliation(s)
- Zhen Ye
- Institute of Entomology; College of Life Sciences; Nankai University; 94 Weijin Road Tianjin 300071 China
| | - Jakob Damgaard
- Natural History Museum of Denmark, Zoological Museum; Universitetsparken 15 2100 Copenhagen Ø Denmark
| | - Daniel Burckhardt
- Naturhistorisches Museum; Augustinergasse 2 CH-4052 Basel Switzerland
| | - George Gibbs
- School of Biological Sciences; Victoria University of Wellington; Wellington New Zealand
| | - Juanjuan Yuan
- Institute of Entomology; College of Life Sciences; Nankai University; 94 Weijin Road Tianjin 300071 China
| | - Huanhuan Yang
- Institute of Entomology; College of Life Sciences; Nankai University; 94 Weijin Road Tianjin 300071 China
| | - Wenjun Bu
- Institute of Entomology; College of Life Sciences; Nankai University; 94 Weijin Road Tianjin 300071 China
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22
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Chazot N, De-Silva DL, Willmott KR, Freitas AVL, Lamas G, Mallet J, Giraldo CE, Uribe S, Elias M. Contrasting patterns of Andean diversification among three diverse clades of Neotropical clearwing butterflies. Ecol Evol 2018; 8:3965-3982. [PMID: 29721272 PMCID: PMC5916281 DOI: 10.1002/ece3.3622] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Revised: 08/31/2017] [Accepted: 10/11/2017] [Indexed: 01/16/2023] Open
Abstract
The Neotropical region is the most biodiverse on Earth, in a large part due to the highly diverse tropical Andean biota. The Andes are a potentially important driver of diversification within the mountains and for neighboring regions. We compared the role of the Andes in diversification among three subtribes of Ithomiini butterflies endemic to the Neotropics, Dircennina, Oleriina, and Godyridina. The diversification patterns of Godyridina have been studied previously. Here, we generate the first time‐calibrated phylogeny for the largest ithomiine subtribe, Dircennina, and we reanalyze a published phylogeny of Oleriina to test different biogeographic scenarios involving the Andes within an identical framework. We found common diversification patterns across the three subtribes, as well as major differences. In Dircennina and Oleriina, our results reveal a congruent pattern of diversification related to the Andes with an Andean origin, which contrasts with the Amazonian origin and multiple Andean colonizations of Godyridina. In each of the three subtribes, a clade diversified in the Northern Andes at a faster rate. Diversification within Amazonia occurred in Oleriina and Godyridina, while virtually no speciation occurred in Dircennina in this region. Dircennina was therefore characterized by higher diversification rates within the Andes compared to non‐Andean regions, while in Oleriina and Godyridina, we found no difference between these regions. Our results and discussion highlight the importance of comparative approaches in biogeographic studies.
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Affiliation(s)
- Nicolas Chazot
- Department of Biology Lunds Universitet Lund Sweden.,Institut de Systématique, Évolution, Biodiversité ISYEB-UMR 7205-CNRS MNHN UPMC EPHE, Muséum national d'Histoire naturelle Sorbonne Universités Paris France
| | - Donna Lisa De-Silva
- Institut de Systématique, Évolution, Biodiversité ISYEB-UMR 7205-CNRS MNHN UPMC EPHE, Muséum national d'Histoire naturelle Sorbonne Universités Paris France
| | - Keith R Willmott
- McGuire Center for Lepidoptera and Biodiversity Florida Museum of Natural History University of Florida Gainesville FL USA
| | - André V L Freitas
- Departamento de Biologia Animal and Museu de Zoologia Instituto de Biologia Universidade Estadual de Campinas Campinas São Paulo Brazil
| | - Gerardo Lamas
- Museo de Historia Natural Universidad Nacional de San Marcos Lima Peru
| | - James Mallet
- Department of Organismic and Evolutionary Biology Harvard University Cambridge MA USA
| | - Carlos E Giraldo
- Grupo de Investigación de Sanidad Vegetal Universidad Católica de Oriente Rionegro Colombia
| | - Sandra Uribe
- Universidad Nacional de Colombia, Sede Medellín Medellín Colombia
| | - Marianne Elias
- Institut de Systématique, Évolution, Biodiversité ISYEB-UMR 7205-CNRS MNHN UPMC EPHE, Muséum national d'Histoire naturelle Sorbonne Universités Paris France
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23
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Strutzenberger P, Brehm G, Gottsberger B, Bodner F, Seifert CL, Fiedler K. Diversification rates, host plant shifts and an updated molecular phylogeny of Andean Eois moths (Lepidoptera: Geometridae). PLoS One 2017; 12:e0188430. [PMID: 29281664 PMCID: PMC5744940 DOI: 10.1371/journal.pone.0188430] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2017] [Accepted: 11/07/2017] [Indexed: 01/07/2023] Open
Abstract
Eois is one of the best-investigated genera of tropical moths. Its close association with Piper plants has inspired numerous studies on life histories, phylogeny and evolutionary biology. This study provides an updated view on phylogeny, host plant use and temporal patterns of speciation in Eois. Using sequence data (2776 bp) from one mitochondrial (COI) and one nuclear gene (Ef1-alpha) for 221 Eois species, we confirm and reinforce previous findings regarding temporal patterns of diversification. Deep diversification within Andean Eois took place in the Miocene followed by a sustained high rate of diversification until the Pleistocene when a pronounced slowdown of speciation is evident. In South America, Eois diversification is very likely to be primarily driven by the Andean uplift which occurred concurrently with the entire evolutionary history of Eois. A massively expanded dataset enabled an in-depth look into the phylogenetic signal contained in host plant usage. This revealed several independent shifts from Piper to other host plant genera and families. Seven shifts to Peperomia, the sister genus of Piper were detected, indicating that the shift to Peperomia was an easy one compared to the singular shifts to the Chloranthaceae, Siparunaceae and the Piperacean genus Manekia. The potential for close co-evolution of Eois with Piper host plants is therefore bound to be limited to smaller subsets within Neotropical Eois instead of a frequently proposed genus-wide co-evolutionary scenario. In regards to Eois systematics we confirm the monophyly of Neotropical Eois in relation to their Old World counterparts. A tentative biogeographical hypothesis is presented suggesting that Eois originated in tropical Asia and subsequently colonized the Neotropics and Africa. Within Neotropical Eois we were able to identify the existence of six clades not recognized in previous studies and confirm and reinforce the monophyly of all 9 previously delimited infrageneric clades.
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Affiliation(s)
- Patrick Strutzenberger
- Department of Botany and Biodiversity Research, Division of Tropical Ecology and Animal Biodiversity, University of Vienna, Vienna, Austria
- * E-mail:
| | - Gunnar Brehm
- Institut für Spezielle Zoologie und Evolutionsbiologie mit Phyletischem Museum, Friedrich-Schiller-Universität Jena, Jena, Germany
| | - Brigitte Gottsberger
- Department of Botany and Biodiversity Research, Division of Tropical Ecology and Animal Biodiversity, University of Vienna, Vienna, Austria
| | - Florian Bodner
- Department of Botany and Biodiversity Research, Division of Tropical Ecology and Animal Biodiversity, University of Vienna, Vienna, Austria
| | - Carlo Lutz Seifert
- Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic
- Institute of Entomology, Department of Ecology, Biology Centre, The Czech Academy of Sciences, České Budějovice, Czech Republic
| | - Konrad Fiedler
- Department of Botany and Biodiversity Research, Division of Tropical Ecology and Animal Biodiversity, University of Vienna, Vienna, Austria
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24
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Carneiro L, Bravo GA, Aristizábal N, Cuervo AM, Aleixo A. Molecular systematics and biogeography of lowland antpittas (Aves, Grallariidae): The role of vicariance and dispersal in the diversification of a widespread Neotropical lineage. Mol Phylogenet Evol 2017; 120:375-389. [PMID: 29233706 DOI: 10.1016/j.ympev.2017.11.019] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Revised: 10/16/2017] [Accepted: 11/28/2017] [Indexed: 10/18/2022]
Abstract
We infer phylogenetic relationships, divergence times, and the diversification history of the avian Neotropical antpitta genera Hylopezus and Myrmothera (Grallariidae), based on sequence data (3,139 base pairs) from two mitochondrial (ND2 and ND3) and three nuclear nuclear introns (TGFB2, MUSK and FGB-I5) from 142 individuals of the 12 currently recognized species in Hylopezus and Myrmothera and 5 outgroup species. Phylogenetic analyses recovered 19 lineages clustered into two major clades, both distributed in Central and South America. Hylopezus nattereri, previously considered a subspecies of H. ochroleucus, was consistently recovered as the most divergent lineage within the Grallaricula/Hylopezus/Myrmothera clade. Ancestral range estimation suggested that modern lowland antpittas probably originated in the Amazonian Sedimentary basin during the middle Miocene, and that most lineages within the Hylopezus/Myrmothera clade appeared in the Plio-Pleistocene. However, the rate of diversification in the Hylopezus/Myrmothera clade appeared to have remained constant through time, with no major shifts over the 20 million years. Although the timing when most modern lineages of the Hylopezus/Myrmothera clade coincides with a period of intense landscape changes in the Neotropics (Plio-Pleistocene), the absence of any significant shifts in diversification rates over the last 20 million years challenges the view that there is a strict causal relationship between intensification of landscape changes and cladogenesis. The relative old age of the Hylopezus/Myrmothera clade coupled with an important role ascribed to dispersal for its diversification, favor an alternative scenario whereby long-term persistence and dispersal across an ever-changing landscape might explain constant rates of cladogenesis through time.
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Affiliation(s)
- Lincoln Carneiro
- Curso de Pós-Graduação em Zoologia, Universidade Federal do Pará-Museu Paraense Emílio Goeldi, Belém, Pará, Brazil; Coordenação de Zoologia, Museu Paraense Emílio Goeldi, Caixa Postal 399, CEP 66040-170 Belém, Pará, Brazil.
| | - Gustavo A Bravo
- Museum of Natural Science, Louisiana State University, Baton Rouge, LA 70803, USA; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA; Department of Organismic and Evolutionary Biology & Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA.
| | - Natalia Aristizábal
- Museum of Natural Science, Louisiana State University, Baton Rouge, LA 70803, USA; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA; Departamento de Ecologia, Instituto de Biociências, Universidade de São Paulo, São Paulo, SP 05508-900, Brazil.
| | - Andrés M Cuervo
- Museum of Natural Science, Louisiana State University, Baton Rouge, LA 70803, USA; Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA; Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Villa de Leyva, Colombia.
| | - Alexandre Aleixo
- Coordenação de Zoologia, Museu Paraense Emílio Goeldi, Caixa Postal 399, CEP 66040-170 Belém, Pará, Brazil.
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25
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Hutter CR, Lambert SM, Wiens JJ. Rapid Diversification and Time Explain Amphibian Richness at Different Scales in the Tropical Andes, Earth’s Most Biodiverse Hotspot. Am Nat 2017; 190:828-843. [DOI: 10.1086/694319] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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26
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Lisa De-Silva D, Mota LL, Chazot N, Mallarino R, Silva-Brandão KL, Piñerez LMG, Freitas AV, Lamas G, Joron M, Mallet J, Giraldo CE, Uribe S, Särkinen T, Knapp S, Jiggins CD, Willmott KR, Elias M. North Andean origin and diversification of the largest ithomiine butterfly genus. Sci Rep 2017; 7:45966. [PMID: 28387233 PMCID: PMC5384087 DOI: 10.1038/srep45966] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 02/22/2017] [Indexed: 01/01/2023] Open
Abstract
The Neotropics harbour the most diverse flora and fauna on Earth. The Andes are a major centre of diversification and source of diversity for adjacent areas in plants and vertebrates, but studies on insects remain scarce, even though they constitute the largest fraction of terrestrial biodiversity. Here, we combine molecular and morphological characters to generate a dated phylogeny of the butterfly genus Pteronymia (Nymphalidae: Danainae), which we use to infer spatial, elevational and temporal diversification patterns. We first propose six taxonomic changes that raise the generic species total to 53, making Pteronymia the most diverse genus of the tribe Ithomiini. Our biogeographic reconstruction shows that Pteronymia originated in the Northern Andes, where it diversified extensively. Some lineages colonized lowlands and adjacent montane areas, but diversification in those areas remained scarce. The recent colonization of lowland areas was reflected by an increase in the rate of evolution of species' elevational ranges towards present. By contrast, speciation rate decelerated with time, with no extinction. The geological history of the Andes and adjacent regions have likely contributed to Pteronymia diversification by providing compartmentalized habitats and an array of biotic and abiotic conditions, and by limiting dispersal between some areas while promoting interchange across others.
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Affiliation(s)
- Donna Lisa De-Silva
- Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205–CNRS MNHN UPMC EPHE, Muséum National d’Histoire Naturelle, Sorbonne Universités, 57 rue Cuvier CP50 F-75005, Paris, France
| | - Luísa L. Mota
- Departamento de Zoologia and Museu de Zoologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil
| | - Nicolas Chazot
- Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205–CNRS MNHN UPMC EPHE, Muséum National d’Histoire Naturelle, Sorbonne Universités, 57 rue Cuvier CP50 F-75005, Paris, France
- Department of Biology, Lunds Universitet, Lund, Sweden
| | - Ricardo Mallarino
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Karina L. Silva-Brandão
- Centro de Biologia Molecular e Engenharia Genética, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil
| | - Luz Miryam Gómez Piñerez
- Universidad Nacional de Colombia, sede Medellín, Medellín, Colombia
- Grupo de investigación Ciencias Forenses y Salud, Tecnológico de Antioquia, Medellin, Colombia
| | - André V.L. Freitas
- Departamento de Zoologia and Museu de Zoologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil
| | - Gerardo Lamas
- Museo de Historia Natural, Universidad Nacional Mayor de San Marcos, Lima, Peru
| | - Mathieu Joron
- Centre d’Ecologie Fonctionnelle et Evolutive, CEFE, UMR 5175 CNRS - EPHE - Université de Montpellier - Université Paul Valéry Montpellier, 34293 Montpellier 5, France
| | - James Mallet
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Carlos E. Giraldo
- Universidad Nacional de Colombia, sede Medellín, Medellín, Colombia
- Grupo de Investigación de Sanidad Vegetal, Universidad Católica de Oriente, Rionegro, Antioquia, Colombia
| | - Sandra Uribe
- Universidad Nacional de Colombia, sede Medellín, Medellín, Colombia
| | - Tiina Särkinen
- Royal Botanic Garden Edinburgh, 20A Inverleith Row, Edinburgh EH3 5LR, UK
| | - Sandra Knapp
- Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Chris D. Jiggins
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Keith R. Willmott
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611, USA
| | - Marianne Elias
- Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205–CNRS MNHN UPMC EPHE, Muséum National d’Histoire Naturelle, Sorbonne Universités, 57 rue Cuvier CP50 F-75005, Paris, France
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27
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Dias CAR, Santos Júnior JE, Perini FA, Santos FR. Biogeographic scenarios for the diversification of a widespread Neotropical species, Glossophaga soricina (Chiroptera: Phyllostomidae). SYST BIODIVERS 2017. [DOI: 10.1080/14772000.2016.1271060] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Cayo A. Rocha Dias
- Laboratório de Evolução de Mamíferos, Departamento de Zoologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av. Antônio Carlos 6627, 31270-010 Belo Horizonte, MG, Brazil
- Pós-Graduação em Zoologia, Universidade Federal de Minas Gerais, 31270-010 Belo Horizonte, MG, Brazil
| | - José E. Santos Júnior
- Pós-Graduação em Genética, Universidade Federal de Minas Gerais, 31270-010 Belo Horizonte, MG, Brazil
- Laboratório de Biodiversidade e Evolução Molecular, Departamento de Biologia Geral, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av. Antônio Carlos 6627, 31270-010 Belo Horizonte, MG, Brazil
| | - Fernando A. Perini
- Laboratório de Evolução de Mamíferos, Departamento de Zoologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av. Antônio Carlos 6627, 31270-010 Belo Horizonte, MG, Brazil
- Pós-Graduação em Zoologia, Universidade Federal de Minas Gerais, 31270-010 Belo Horizonte, MG, Brazil
| | - Fabrício R. Santos
- Pós-Graduação em Zoologia, Universidade Federal de Minas Gerais, 31270-010 Belo Horizonte, MG, Brazil
- Pós-Graduação em Genética, Universidade Federal de Minas Gerais, 31270-010 Belo Horizonte, MG, Brazil
- Laboratório de Biodiversidade e Evolução Molecular, Departamento de Biologia Geral, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av. Antônio Carlos 6627, 31270-010 Belo Horizonte, MG, Brazil
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28
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Jenkins Shaw J, Żyła D, Solodovnikov A. A spectacular new genus of Staphylinini rove beetle from the tropical Andes and its phylogenetic assessment (Coleoptera : Staphylinidae). INVERTEBR SYST 2017. [DOI: 10.1071/is17020] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Devilleferus brunkei Jenkins Shaw & Solodovnikov, gen. et sp. nov., a distinctive new genus and species of Staphylinini rove beetle with an unusual set of morphological characters is described from the tropical Andes (Ecuador and possibly Colombia and Bolivia) in South America. To resolve systematic placement of the new genus within Staphylinini we assembled a dataset of 68 morphological characters scored for 34 taxa representing a broad sample of the respective rove beetle tribe, and performed Bayesian inference and maximum parsimony phylogenetic analyses. Both analytical methods unambiguously placed Devilleferus as sister to the subtribe Amblyopinina, and overall they corroborated recently established subtribal systematics for Staphylinini inferred mainly from molecular markers. Based on the shared synapomorphies, Devilleferus is assigned to the subtribe Amblyopinina. The internal relationships within Amblyopinina remain to be clarified in a broader study of that very poorly explored austral lineage.
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29
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Nattier R, Capdevielle-Dulac C, Cassildé C, Couloux A, Cruaud C, Lachaume G, Lamas G, Silvain JF, Blandin P. Phylogeny and diversification of the cloud forest Morpho sulkowskyi
group (Lepidoptera, Nymphalidae) in the evolving Andes. ZOOL SCR 2016. [DOI: 10.1111/zsc.12226] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Romain Nattier
- Institut de Systématique, Evolution, Biodiversité; ISYEB UMR 7205 CNRS MNHN UPMC EPHE; Muséum national d'Histoire naturelle; Sorbonne Universités; 57 rue Cuvier CP50 75005 Paris France
- Laboratoire Évolution, génomes, comportement, écologie; CNRS université Paris-Sud UMR 9191 - IRD UMR 247; Gif-sur-Yvette France
| | - Claire Capdevielle-Dulac
- Laboratoire Évolution, génomes, comportement, écologie; CNRS université Paris-Sud UMR 9191 - IRD UMR 247; Gif-sur-Yvette France
| | - Catherine Cassildé
- Institut de Systématique, Evolution, Biodiversité; ISYEB UMR 7205 CNRS MNHN UPMC EPHE; Muséum national d'Histoire naturelle; Sorbonne Universités; 57 rue Cuvier CP50 75005 Paris France
| | - Arnaud Couloux
- Technique; Genoscope. Centre National de Sequençage; Evry Ile-de-France France
| | - Corinne Cruaud
- Technique; Genoscope. Centre National de Sequençage; Evry Ile-de-France France
| | | | - Gerardo Lamas
- Departamento de Entomología; Museo de Historia Natural, Universidad Nacional Mayor de San Marcos; Avenida Arenales 1256 Apartado 14-0434 Lima 14 Peru
| | - Jean-François Silvain
- Laboratoire Évolution, génomes, comportement, écologie; CNRS université Paris-Sud UMR 9191 - IRD UMR 247; Gif-sur-Yvette France
| | - Patrick Blandin
- Institut de Systématique, Evolution, Biodiversité; ISYEB UMR 7205 CNRS MNHN UPMC EPHE; Muséum national d'Histoire naturelle; Sorbonne Universités; 57 rue Cuvier CP50 75005 Paris France
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30
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Chazot N, Willmott KR, Condamine FL, De‐Silva DL, Freitas AVL, Lamas G, Morlon H, Giraldo CE, Jiggins CD, Joron M, Mallet J, Uribe S, Elias M. Into the Andes: multiple independent colonizations drive montane diversity in the Neotropical clearwing butterflies Godyridina. Mol Ecol 2016; 25:5765-5784. [DOI: 10.1111/mec.13773] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2015] [Revised: 07/05/2016] [Accepted: 07/11/2016] [Indexed: 02/06/2023]
Affiliation(s)
- Nicolas Chazot
- Institut de Systématique, Évolution, Biodiversité ISYEB – UMR 7205 – CNRS MNHN UPMC EPHE Muséum national d'Histoire naturelle Sorbonne Universités 57 rue Cuvier CP50 F‐75005 Paris France
- Department of Biology University of Lund 223 62 Lund Sweden
| | - Keith R. Willmott
- McGuire Center for Lepidoptera and Biodiversity Florida Museum of Natural History University of Florida Gainesville FL 32611 USA
| | - Fabien L. Condamine
- CNRS UMR 5554 Institut des Sciences de l'Evolution (Université de Montpellier) Place Eugène Bataillon 34095 Montpellier France
- Department of Biological Sciences University of Alberta T6G 2E9 Edmonton AB Canada
| | - Donna Lisa De‐Silva
- Institut de Systématique, Évolution, Biodiversité ISYEB – UMR 7205 – CNRS MNHN UPMC EPHE Muséum national d'Histoire naturelle Sorbonne Universités 57 rue Cuvier CP50 F‐75005 Paris France
| | - André V. L. Freitas
- Departamento de Zoologia and Museu de Zoologia Instituto de Biologia Universidade Estadual de Campinas Campinas São Paulo Brazil
| | - Gerardo Lamas
- Museo de Historia Natural Universidad Nacional de San Marcos Lima Peru
| | - Hélène Morlon
- IBENS Ecole Normale Supérieure UMR 8197 CNRS Paris France
| | - Carlos E. Giraldo
- Grupo de Investigación de Sanidad Vegetal Universidad Católica de Oriente Rionegro Antioquia Colombia
| | | | - Mathieu Joron
- Centre d'Ecologie Fonctionnelle et Evolutive CEFE UMR 5175 CNRS – EPHE – Université de Montpellier – Université Paul Valéry Montpellier 34293 Montpellier 5 France
| | - James Mallet
- Department of Organismic and Evolutionary Biology Harvard University Cambridge MA 02138 USA
| | - Sandra Uribe
- Universidad Nacional de Colombia, sede Medellín Medellín Colombia
| | - Marianne Elias
- Institut de Systématique, Évolution, Biodiversité ISYEB – UMR 7205 – CNRS MNHN UPMC EPHE Muséum national d'Histoire naturelle Sorbonne Universités 57 rue Cuvier CP50 F‐75005 Paris France
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