1
|
O'Loughlin B, Brandão-Dias PFP, Gates MW, Egan SP. Description of a new species of Chrysonotomyia Ashmead from Houston, Texas, USA (Hymenoptera, Chalcidoidea, Eulophidae). Zookeys 2024; 1212:241-254. [PMID: 39328215 PMCID: PMC11424984 DOI: 10.3897/zookeys.1212.127537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Accepted: 08/12/2024] [Indexed: 09/28/2024] Open
Abstract
A new species of the genus Chrysonotomyia Ashmead, Chrysonotomyiasusbelli sp. nov., is described from the Rice University campus in Houston, Texas, USA. The species is a parasitoid emerging from Neuroterusnr.bussae galls in leaves of the southern live oak (Quercusvirginiana). This represents the 6th species described from North America north of Mexico and the first in the world known to parasitize cynipid gall wasps. This discovery hints at an entire undiscovered niche between Chrysonotomyia parasitoids, cynipid gall wasps, and oaks in the Nearctic, which is a global biodiversity hotspot for oaks and cynipids. This new species description is complemented by mtDNA-COI-barcode data and information on the natural history of this species. We record host association, phenology, and report a leaf-scanning behavior performed by females, presumably to search for host galls. Modifications to the key of New World members of the genus (Hansson 2004) are included to integrate this new species.
Collapse
Affiliation(s)
- Brendan O'Loughlin
- Department of BioSciences, Rice University, Houston, Texas, 77005, USA Rice University Houston United States of America
| | - Pedro F P Brandão-Dias
- Department of BioSciences, Rice University, Houston, Texas, 77005, USA Rice University Houston United States of America
| | - Michael W Gates
- Systematic Entomology Laboratory, USDA-ARS, c/o NMNH, Smithsonian Institution, 10th & Constitution Ave. NW, Washington, DC, USA Smithsonian Institution Washington DC United States of America
| | - Scott P Egan
- Department of BioSciences, Rice University, Houston, Texas, 77005, USA Rice University Houston United States of America
| |
Collapse
|
2
|
Springer AL, Gompert Z. Considerable genetic diversity and structure despite narrow endemism and limited ecological specialization in the Hayden's ringlet, Coenonympha haydenii. Mol Ecol 2024; 33:e17310. [PMID: 38441401 DOI: 10.1111/mec.17310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 11/26/2023] [Accepted: 02/15/2024] [Indexed: 03/26/2024]
Abstract
Understanding the processes that underlie the development of population genetic structure is central to the study of evolution. Patterns of genetic structure, in turn, can reveal signatures of isolation by distance (IBD), barriers to gene flow, or even the genesis of speciation. However, it is unclear how severe range restriction might impact the processes that dominate the development of genetic structure. In narrow endemic species, is population structure likely to be adaptive in nature, or rather the result of genetic drift? In this study, we investigated patterns of genetic diversity and structure in the narrow endemic Hayden's ringlet butterfly. Specifically, we asked to what degree genetic structure in the Hayden's ringlet can be explained by IBD, isolation by resistance (IBR) (in the form of geographic or ecological barriers to migration between populations), and isolation by environment (in the form of differences in host plant availability and preference). We employed a genotyping-by-sequencing (GBS) approach coupled with host preference assays, Bayesian modelling, and population genomic analyses to answer these questions. Our results suggest that despite their restricted range, levels of genetic diversity in the Hayden's ringlet are comparable to those seen in more widespread butterfly species. Hayden's ringlets showed a strong preference for feeding on grasses relative to sedges, but neither larval preference nor potential host availability at sampling sites correlated with genetic structure. We conclude that geography, in the form of IBR and simple IBD, was the major driver of contemporary patterns of differentiation in this narrow endemic species.
Collapse
Affiliation(s)
- Amy L Springer
- Department of Biology, Utah State University, Logan, Utah, USA
| | - Zachariah Gompert
- Department of Biology, Utah State University, Logan, Utah, USA
- Ecology Center, Utah State University, Logan, Utah, USA
| |
Collapse
|
3
|
Duran DP, Laroche RA, Roman SJ, Godwin W, Herrmann DP, Bull E, Egan SP. Species delimitation, discovery and conservation in a tiger beetle species complex despite discordant genetic data. Sci Rep 2024; 14:6617. [PMID: 38503840 PMCID: PMC10951344 DOI: 10.1038/s41598-024-56875-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Accepted: 03/12/2024] [Indexed: 03/21/2024] Open
Abstract
In an age of species declines, delineating and discovering biodiversity is critical for both taxonomic accuracy and conservation. In recent years, there has been a movement away from using exclusively morphological characters to delineate and describe taxa and an increase in the use of molecular markers to describe diversity or through integrative taxonomy, which employs traditional morphological characters, as well as genetic or other data. Tiger beetles are charismatic, of conservation concern, and much work has been done on the morphological delineation of species and subspecies, but few of these taxa have been tested with genetic analyses. In this study, we tested morphologically based taxonomic hypotheses of polymorphic tiger beetles in the Eunota circumpicta (LaFerté-Sénectère, 1841) species complex using multilocus genomic and mtDNA analyses. We find multiple cryptic species within the previous taxonomic concept of Eunota circumpicta, some of which were historically recognized as subspecies. We found that the mtDNA and genomic datasets did not identify the same taxonomic units and that the mtDNA was most at odds with all other genetic and morphological patterns. Overall, we describe new cryptic diversity, which raises important conservation concerns, and provide a working example for testing species and subspecies validity despite discordant data.
Collapse
Affiliation(s)
- Daniel P Duran
- Department of Environmental Science, Rowan University, Glassboro, NJ, 08028, USA.
| | - Robert A Laroche
- Department of BioSciences, Rice University, Houston, TX, 77005, USA
| | - Stephen J Roman
- Florida State Collection of Arthropods, Gainesville, FL, 32608, USA
| | - William Godwin
- Sam Houston State Natural History Collection, Huntsville, TX, 77340, USA
| | | | - Ethan Bull
- Department of BioSciences, Rice University, Houston, TX, 77005, USA
| | - Scott P Egan
- Department of BioSciences, Rice University, Houston, TX, 77005, USA
| |
Collapse
|
4
|
Roush AM, Zhang L, Hood GR, Ott JR, Egan SP. A test of trade-offs in dispersal and reproduction within and between a sister species pair of specialist insect herbivores. Oecologia 2024; 204:529-542. [PMID: 38324065 DOI: 10.1007/s00442-024-05512-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2023] [Accepted: 01/08/2024] [Indexed: 02/08/2024]
Abstract
Understanding the drivers of trade-offs among traits is vital for comprehending the evolution and maintenance of trait variation. Theoretical frameworks propose that evolutionary mechanisms governing trade-offs frequently exhibit a scale-dependent nature. However, empirical tests of whether trade-offs exhibited across various biological scales (i.e. individuals, populations, species, genera, etc.) remains scarce. In this study, we explore trade-off between dispersal and reproductive effort among sympatric sister species of wasps in the genus Belonocnema (Hymenoptera: Cynipini: Cynipidae) that form galls on live oaks: B. fossoria, which specializes on Quercus geminata, and B. treatae, which specializes on Q. virginiana. Specifically, our results suggest that B. fossoria has evolved reduced flight capability and smaller wings, but a larger abdomen and greater total reproductive effort than B. treatae, which has larger wings and is a stronger flier, but has a smaller abdomen and reduced total reproductive effort. These traits and the relationships among them remain unchanged when B. fossoria and B. treatae are transplanted and reared onto the alternative host plant, suggesting that trait divergence is genetically based as opposed to being a plastic response to the different rearing environments. However, when looking within species, we found no evidence of intraspecific trade-offs between wing length and reproductive traits within either B. fossoria or B. treatae. Overall, our results indicate that observed trade-offs in life history traits between the two gall former species are likely a result of independent adaptations in response to different environments as opposed to the amplified expression of within species intrinsic tradeoffs.
Collapse
Affiliation(s)
- Amy M Roush
- Department of BioSciences, Rice University, Houston, TX, 77005, USA
| | - Linyi Zhang
- Department of BioSciences, Rice University, Houston, TX, 77005, USA.
- Department of Biology, University of Toronto, Toronto, ON, M5S1A4, Canada.
- Department of Biological Sciences, George Washington University, Washington, DC, 20052, USA.
| | - Glen Ray Hood
- Department of Biological Sciences, Wayne State University, Detroit, MI, 48202, USA
| | - James R Ott
- Department of Biology, Population and Conservation Biology Program, Texas State University, San Marcos, TX, 78666, USA
| | - Scott P Egan
- Department of BioSciences, Rice University, Houston, TX, 77005, USA
| |
Collapse
|
5
|
Ravigné V, Rodrigues LR, Charlery de la Masselière M, Facon B, Kuczyński L, Radwan J, Skoracka A, Magalhães S. Understanding the joint evolution of dispersal and host specialisation using phytophagous arthropods as a model group. Biol Rev Camb Philos Soc 2024; 99:219-237. [PMID: 37724465 DOI: 10.1111/brv.13018] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Revised: 09/11/2023] [Accepted: 09/11/2023] [Indexed: 09/20/2023]
Abstract
Theory generally predicts that host specialisation and dispersal should evolve jointly. Indeed, many models predict that specialists should be poor dispersers to avoid landing on unsuitable hosts while generalists will have high dispersal abilities. Phytophagous arthropods are an excellent group to test this prediction, given extensive variation in their host range and dispersal abilities. Here, we explore the degree to which the empirical literature on this group is in accordance with theoretical predictions. We first briefly outline the theoretical reasons to expect such a correlation. We then report empirical studies that measured both dispersal and the degree of specialisation in phytophagous arthropods. We find a correlation between dispersal and levels of specialisation in some studies, but with wide variation in this result. We then review theoretical attributes of species and environment that may blur this correlation, namely environmental grain, temporal heterogeneity, habitat selection, genetic architecture, and coevolution between plants and herbivores. We argue that theoretical models fail to account for important aspects, such as phenotypic plasticity and the impact of selective forces stemming from other biotic interactions, on both dispersal and specialisation. Next, we review empirical caveats in the study of this interplay. We find that studies use different measures of both dispersal and specialisation, hampering comparisons. Moreover, several studies do not provide independent measures of these two traits. Finally, variation in these traits may occur at scales that are not being considered. We conclude that this correlation is likely not to be expected from large-scale comparative analyses as it is highly context dependent and should not be considered in isolation from the factors that modulate it, such as environmental scale and heterogeneity, intrinsic traits or biotic interactions. A stronger crosstalk between theoretical and empirical studies is needed to understand better the prevalence and basis of the correlation between dispersal and specialisation.
Collapse
Affiliation(s)
- Virginie Ravigné
- CIRAD, UMR PHIM, - PHIM, University of Montpellier, CIRAD, INRAE, Institut Agro, IRD, TA A-120/K, Campus international de Baillarguet, avenue du Campus d'Agropolis, Montpellier Cedex 5, 34398, France
| | - Leonor R Rodrigues
- cE3c: Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Departamento Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, edifício C2, Lisboa, 1749-016, Portugal
| | - Maud Charlery de la Masselière
- cE3c: Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Departamento Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, edifício C2, Lisboa, 1749-016, Portugal
| | - Benoît Facon
- CBGP, INRAE, IRD, CIRAD, Institut Agro, University of Montpellier, 755 avenue du Campus Agropolis, CS 34988, Montferrier sur Lez cedex, 30016, France
| | - Lechosław Kuczyński
- Population Ecology Lab, Faculty of Biology, Institute of Environmental Biology, Adam Mickiewicz University, Poznań, Uniwersytetu Poznańskiego 6, Poznań, 61-614, Poland
| | - Jacek Radwan
- Evolutionary Biology Group, Faculty of Biology, Institute of Environmental Biology, Adam Mickiewicz University, Poznań, Uniwersytetu Poznańskiego 6, Poznań, 61-614, Poland
| | - Anna Skoracka
- Population Ecology Lab, Faculty of Biology, Institute of Environmental Biology, Adam Mickiewicz University, Poznań, Uniwersytetu Poznańskiego 6, Poznań, 61-614, Poland
| | - Sara Magalhães
- cE3c: Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Departamento Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, edifício C2, Lisboa, 1749-016, Portugal
| |
Collapse
|
6
|
Laroche RA, Duran DP, Lee CTA, Godwin W, Roman SJ, Herrmann DP, Egan SP. A genomic test of subspecies in the Eunota togata species group (Coleoptera: Cicindelidae): Morphology masks evolutionary relationships and taxonomy. Mol Phylogenet Evol 2023; 189:107937. [PMID: 37797795 DOI: 10.1016/j.ympev.2023.107937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2022] [Revised: 09/27/2023] [Accepted: 09/28/2023] [Indexed: 10/07/2023]
Abstract
Most of the world's biodiversity is described primarily or exclusively using morphological traits that may not always reflect the true evolutionary units. Accurate taxonomy is critical for conservation efforts and re-evaluation of traditional taxonomy may often be warranted since species and subspecies are frequently the focus of conservation and faunistic studies. Here, we test comprehensive taxonomic hypotheses of morphologically defined subspecies in the tiger beetle, Eunota togata (LaFerté-Sénectère, 1841). The four recognized subspecies were delineated based mainly on the dorsal coloration and extent of white markings termed maculations. We combine inferences from mtDNA genealogies and genome-wide multilocus data to elucidate the evolutionary relationships within the group and assess the taxonomic implications. Three of the four subspecific taxa delineated by morphology were not supported by the genomic or mtDNA data. In fact, the species-level diversity in this group was underestimated, as E. togata was found to represent three well-supported distinct species in all genetic analyses. Emerging from these analyses, we also document an intriguing example of convergent evolution in lighter colored E. togata adapting to similar white saline backgrounds. Our collective work underscores the importance of using molecular methods to reevaluate morphological based taxonomy for species and subspecies delimitation and conservation.
Collapse
Affiliation(s)
- Robert A Laroche
- Department of BioSciences, Rice University, Houston, TX 77005, USA
| | - Daniel P Duran
- Department of Environmental Science, Rowan University, Glassboro, NJ 08028, USA.
| | - Cin-Ty A Lee
- Department of Earth, Environmental & Planetary Science, Rice University, Houston, TX 77005, USA
| | - William Godwin
- Sam Houston State Natural History Collection, Huntsville, TX 77320, USA
| | | | | | - Scott P Egan
- Department of BioSciences, Rice University, Houston, TX 77005, USA
| |
Collapse
|
7
|
Poveda-Martínez D, Salinas NA, Aguirre MB, Sánchez-Restrepo AF, Hight S, Díaz-Soltero H, Logarzo G, Hasson E. Genomic and ecological evidence shed light on the recent demographic history of two related invasive insects. Sci Rep 2022; 12:19629. [PMID: 36385480 PMCID: PMC9669014 DOI: 10.1038/s41598-022-21548-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Accepted: 09/28/2022] [Indexed: 11/17/2022] Open
Abstract
Hypogeococcus pungens is a species complex native to southern South America that is composed of at least five putative species, each one specialized in the use of different host plants. Two of these undescribed species were registered as invasive in Central and North America: Hyp-C is a cactophagous mealybug that became an important pest that threatens endemic cactus species in Puerto Rico, and Hyp-AP feeds on Amaranthaceae and Portulacaceae hosts, but does not produce severe damage to the host plants. We quantified genomic variation and investigated the demographic history of both invasive species by means of coalescent-based simulations using high throughput sequencing data. We also evaluated the incidence of host plant infestation produced by both species and used an ecological niche modeling approach to assess potential distribution under current and future climatic scenarios. Our genetic survey evinced the footprints of strong effective population size reduction and signals of genetic differentiation among populations within each species. Incidence of plant attacks varied between species and among populations within species, with some host plant species preferred over others. Ecological niche modeling suggested that under future climatic scenarios both species would expand their distribution ranges in Puerto Rico. These results provide valuable information for the design of efficient management and control strategies of the Puerto Rican cactus pest and shed light on the evolutionary pathways of biological invasions.
Collapse
Affiliation(s)
- Daniel Poveda-Martínez
- Fundación Para El Estudio de Especies Invasivas (FuEDEI), Hurlingham, Argentina.
- Facultad de Ciencias Exactas Y Naturales, Instituto de Ecología Genética Y Evolución de Buenos Aires (IEGEBA), Universidad de Buenos Aires, Buenos Aires, Argentina.
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.
| | - Nicolas A Salinas
- Fundación Para El Estudio de Especies Invasivas (FuEDEI), Hurlingham, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - María Belén Aguirre
- Fundación Para El Estudio de Especies Invasivas (FuEDEI), Hurlingham, Argentina.
| | - Andrés F Sánchez-Restrepo
- Fundación Para El Estudio de Especies Invasivas (FuEDEI), Hurlingham, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - Stephen Hight
- Insect Behavior and Biocontrol Research Unit (IBBRU), USDA-ARS, Tallahassee, FL, USA
| | | | - Guillermo Logarzo
- Fundación Para El Estudio de Especies Invasivas (FuEDEI), Hurlingham, Argentina
| | - Esteban Hasson
- Facultad de Ciencias Exactas Y Naturales, Instituto de Ecología Genética Y Evolución de Buenos Aires (IEGEBA), Universidad de Buenos Aires, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| |
Collapse
|
8
|
MacDonald ZG, Snape KL, Roe AD, Sperling F. Host association, environment, and geography underlie genomic differentiation in a major forest pest. Evol Appl 2022; 15:1749-1765. [PMID: 36426133 PMCID: PMC9679251 DOI: 10.1111/eva.13466] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Accepted: 07/29/2022] [Indexed: 11/30/2022] Open
Abstract
Diverse geographic, environmental, and ecological factors affect gene flow and adaptive genomic variation within species. With recent advances in landscape ecological modelling and high-throughput DNA sequencing, it is now possible to effectively quantify and partition their relative contributions. Here, we use landscape genomics to identify determinants of genomic differentiation in the forest tent caterpillar, Malacosoma disstria, a widespread and irruptive pest of numerous deciduous tree species in North America. We collected larvae from multiple populations across Eastern Canada, where the species experiences a diversity of environmental gradients and feeds on a number of different host tree species, including trembling aspen (Populus tremuloides), sugar maple (Acer saccharum), red oak (Quercus rubra), and white birch (Betula papyrifera). Using a combination of reciprocal causal modelling (RCM) and distance-based redundancy analyses (dbRDA), we show that differentiation of thousands of genome-wide single nucleotide polymorphisms (SNPs) among individuals is best explained by a combination of isolation by distance, isolation by environment (spatial variation in summer temperatures and length of the growing season), and differences in host association. Configuration of suitable habitat inferred from ecological niche models was not significantly related to genomic differentiation, suggesting that M. disstria dispersal is agnostic with respect to habitat quality. Although population structure was not discretely related to host association, our modelling framework provides the first molecular evidence of host-associated differentiation in M. disstria, congruent with previous documentation of reduced growth and survival of larvae moved between natal host species. We conclude that ecologically mediated selection is contributing to variation within M. disstria, and that divergent adaptation related to both environmental conditions and host association should be considered in ongoing research and management of this important forest pest.
Collapse
Affiliation(s)
- Zachary G. MacDonald
- Department of Biological SciencesUniversity of AlbertaEdmontonAlbertaCanada
- UCLA La Kretz Center for California Conservation ScienceUniversity of California Los AngelesLos AngelesCaliforniaUSA
- Institute of the Environmental and SustainabilityUniversity of California Los AngelesLos AngelesCaliforniaUSA
| | - Kyle L. Snape
- Department of Biological SciencesUniversity of AlbertaEdmontonAlbertaCanada
| | - Amanda D. Roe
- Great Lakes Forestry Centre, Canadian Forest ServiceNatural Resources CanadaSault Ste. MarieOntarioCanada
| | | |
Collapse
|
9
|
Ward AKG, Bagley RK, Egan SP, Hood GR, Ott JR, Prior KM, Sheikh SI, Weinersmith KL, Zhang L, Zhang YM, Forbes AA. Speciation in Nearctic oak gall wasps is frequently correlated with changes in host plant, host organ, or both. Evolution 2022; 76:1849-1867. [PMID: 35819249 PMCID: PMC9541853 DOI: 10.1111/evo.14562] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Revised: 04/21/2022] [Accepted: 04/28/2022] [Indexed: 01/22/2023]
Abstract
Quantifying the frequency of shifts to new host plants within diverse clades of specialist herbivorous insects is critically important to understand whether and how host shifts contribute to the origin of species. Oak gall wasps (Hymenoptera: Cynipidae: Cynipini) comprise a tribe of ∼1000 species of phytophagous insects that induce gall formation on various organs of trees in the family Fagacae-primarily the oaks (genus Quercus; ∼435 sp.). The association of oak gall wasps with oaks is ancient (∼50 my), and most oak species are galled by one or more gall wasp species. Despite the diversity of both gall wasp species and their plant associations, previous phylogenetic work has not identified the strong signal of host plant shifting among oak gall wasps that has been found in other phytophagous insect systems. However, most emphasis has been on the Western Palearctic and not the Nearctic where both oaks and oak gall wasps are considerably more species rich. We collected 86 species of Nearctic oak gall wasps from most of the major clades of Nearctic oaks and sequenced >1000 Ultraconserved Elements (UCEs) and flanking sequences to infer wasp phylogenies. We assessed the relationships of Nearctic gall wasps to one another and, by leveraging previously published UCE data, to the Palearctic fauna. We then used phylogenies to infer historical patterns of shifts among host tree species and tree organs. Our results indicate that oak gall wasps have moved between the Palearctic and Nearctic at least four times, that some Palearctic wasp clades have their proximate origin in the Nearctic, and that gall wasps have shifted within and between oak tree sections, subsections, and organs considerably more often than previous data have suggested. Given that host shifts have been demonstrated to drive reproductive isolation between host-associated populations in other phytophagous insects, our analyses of Nearctic gall wasps suggest that host shifts are key drivers of speciation in this clade, especially in hotspots of oak diversity. Although formal assessment of this hypothesis requires further study, two putatively oligophagous gall wasp species in our dataset show signals of host-associated genetic differentiation unconfounded by geographic distance, suggestive of barriers to gene flow associated with the use of alternative host plants.
Collapse
Affiliation(s)
| | - Robin K. Bagley
- Department of BiologyUniversity of IowaIowa CityIowa52245
- Department of Evolution, Ecology, and Organismal BiologyThe Ohio State UniversityLimaOhio45804
| | - Scott P. Egan
- Department of BioSciencesRice UniversityHoustonTexas77005
| | - Glen Ray Hood
- Department of BioSciencesRice UniversityHoustonTexas77005
- Department of Biological ScienceWayne State UniversityDetroitMichigan48202
| | - James R. Ott
- Department of BiologyTexas State UniversitySan MarcosTexas78666
| | - Kirsten M. Prior
- Department of Biological SciencesBinghamton UniversityBinghamtonNew York13902
| | - Sofia I. Sheikh
- Department of BiologyUniversity of IowaIowa CityIowa52245
- Department of Ecology and EvolutionUniversity of ChicagoChicagoIllinois60637
| | | | - Linyi Zhang
- Department of BioSciencesRice UniversityHoustonTexas77005
- Department of Ecology and Evolutionary BiologyUniversity of TorontoTorontoONM5S 3B2Canada
| | - Y. Miles Zhang
- Systematic Entomology Laboratory, USDA‐ARSc/o National Museum of Natural HistoryWashingtonD.C.20560
| | | |
Collapse
|
10
|
Zhang YM, Sheikh SI, Ward AKG, Forbes AA, Prior KM, Stone GN, Gates MW, Egan SP, Zhang L, Davis C, Weinersmith KL, Melika G, Lucky A. Delimiting the cryptic diversity and host preferences of Sycophila parasitoid wasps associated with oak galls using phylogenomic data. Mol Ecol 2022; 31:4417-4433. [PMID: 35762844 DOI: 10.1111/mec.16582] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 06/06/2022] [Accepted: 06/23/2022] [Indexed: 11/28/2022]
Abstract
Cryptic species diversity is a major challenge for the species-rich community of parasitoids attacking oak gall wasps due to a high degree of sexual dimorphism, morphological plasticity, small size, and poorly known biology. As such, we know very little about the number of species present, nor the evolutionary forces responsible for generating this diversity. One hypothesis is that trait diversity in the gall wasps, including the morphology of the galls they induce, has evolved in response to selection imposed by the parasitoid community, with reciprocal selection driving diversification of the parasitoids. Using a rare, continental-scale data set of Sycophila parasitoid wasps reared from 44 species of cynipid galls from 18 species of oak across the US, we combined mitochondrial DNA barcodes, Ultraconserved Elements (UCEs), morphological, and natural history data to delimit putative species. Using these results, we generate the first large-scale assessment of ecological specialization and host association in this species-rich group, with implications for evolutionary ecology and biocontrol. We find most Sycophila target specific subsets of available cynipid host galls with similar morphologies, and generally attack larger galls. Our results suggest that parasitoid wasps such as Sycophila have adaptations allowing them to exploit particular host trait combinations, while hosts with contrasting traits are resistant to attack. These findings support the tritrophic niche concept for the structuring of plant-herbivore-parasitoid communities.
Collapse
Affiliation(s)
- Y Miles Zhang
- Systematic Entomology Laboratory, USDA-ARS, c/o National Museum of Natural History, Washington, DC, USA.,Entomology and Nematology Department, University of Florida, Gainesville, FL, USA
| | - Sofia I Sheikh
- Department of Biology, University of Iowa, Iowa City, IA, 52242, USA
| | - Anna K G Ward
- Department of Biology, University of Iowa, Iowa City, IA, 52242, USA
| | - Andrew A Forbes
- Department of Biology, University of Iowa, Iowa City, IA, 52242, USA
| | - Kirsten M Prior
- Department of Biological Sciences, Binghamton University, Binghamton, NY, USA
| | - Graham N Stone
- Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK
| | - Michael W Gates
- Systematic Entomology Laboratory, USDA-ARS, c/o National Museum of Natural History, Washington, DC, USA
| | - Scott P Egan
- Department of BioSciences, Rice University, Houston, TX, USA
| | - Linyi Zhang
- Department of BioSciences, Rice University, Houston, TX, USA.,Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, ON, Canada
| | - Charles Davis
- Department of BioSciences, Rice University, Houston, TX, USA.,Department of Entomology, Pennsylvania State University, University Park, PA, USA
| | | | - George Melika
- Plant Health and Molecular Biology Laboratory, Directorate of Plant Protection, Budapest, Hungary
| | - Andrea Lucky
- Entomology and Nematology Department, University of Florida, Gainesville, FL, USA
| |
Collapse
|
11
|
Scientometric Analysis for Spatial Autocorrelation-Related Research from 1991 to 2021. ISPRS INTERNATIONAL JOURNAL OF GEO-INFORMATION 2022. [DOI: 10.3390/ijgi11050309] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Spatial autocorrelation describes the interdependent relationship between the realizations or observations of a variable that is distributed across a geographical landscape, which may be divided into different units/areas according to natural or political boundaries. Researchers of Geographical Information Science (GIS) always consider spatial autocorrelation. However, spatial autocorrelation research covers a wide range of disciplines, not only GIS, but spatial econometrics, ecology, biology, etc. Since spatial autocorrelation relates to multiple disciplines, it is difficult gain a wide breadth of knowledge on all its applications, which is very important for beginners to start their research as well as for experienced scholars to consider new perspectives in their works. Scientometric analyses are conducted in this paper to achieve this end. Specifically, we employ scientometrc indicators and scientometric network mapping techniques to discover influential journals, countries, institutions, and research communities; key topics and papers; and research development and trends. The conclusions are: (1) journals categorized into ecological and biological domains constitute the majority of TOP journals;(2) northern American countries, European countries, Australia, Brazil, and China contribute the most to spatial autocorrelation-related research; (3) eleven research communities consisting of three geographical communities and eight communities of other domains were detected; (4) hot topics include spatial autocorrelation analysis for molecular data, biodiversity, spatial heterogeneity, and variability, and problems that have emerged in the rapid development of China; and (5) spatial statistics-based approaches and more intensive problem-oriented applications are, and still will be, the trend of spatial autocorrelation-related research. We also refine the results from a geographer’s perspective at the end of this paper.
Collapse
|
12
|
Meza‐Lázaro RN, Peña‐Carrillo KI, Poteaux C, Lorenzi MC, Wetterer JK, Zaldívar‐Riverón A. Genome and cuticular hydrocarbon-based species delimitation shed light on potential drivers of speciation in a Neotropical ant species complex. Ecol Evol 2022; 12:e8704. [PMID: 35342602 PMCID: PMC8928884 DOI: 10.1002/ece3.8704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 02/02/2022] [Accepted: 02/18/2022] [Indexed: 12/03/2022] Open
Abstract
Geographic separation that leads to the evolution of reproductive isolation between populations generally is considered the most common form of speciation. However, speciation may also occur in the absence of geographic barriers due to phenotypic and genotypic factors such as chemical cue divergence, mating signal divergence, and mitonuclear conflict. Here, we performed an integrative study based on two genome-wide techniques (3RAD and ultraconserved elements) coupled with cuticular hydrocarbon (CHC) and mitochondrial (mt) DNA sequence data, to assess the species limits within the Ectatomma ruidum species complex, a widespread and conspicuous group of Neotropical ants for which heteroplasmy (i.e., presence of multiple mtDNA variants in an individual) has been recently discovered in some populations from southeast Mexico. Our analyses indicate the existence of at least five distinct species in this complex: two widely distributed across the Neotropics, and three that are restricted to southeast Mexico and that apparently have high levels of heteroplasmy. We found that species boundaries in the complex did not coincide with geographic barriers. We therefore consider possible roles of alternative drivers that may have promoted the observed patterns of speciation, including mitonuclear incompatibility, CHC differentiation, and colony structure. Our study highlights the importance of simultaneously assessing different sources of evidence to disentangle the species limits of taxa with complicated evolutionary histories.
Collapse
Affiliation(s)
- Rubi N. Meza‐Lázaro
- Colección Nacional de InsectosInstituto de BiologíaUniversidad Nacional Autónoma de MéxicoCiudad de MéxicoMéxico
| | - Kenzy I. Peña‐Carrillo
- Laboratoire d’Ethologie Expérimentale et ComparéeUR 4443LEECUniversité Sorbonne Paris NordClémentFrance
- INIFAPCampo Experimental General TeránGeneral TeránMexico
| | - Chantal Poteaux
- Laboratoire d’Ethologie Expérimentale et ComparéeUR 4443LEECUniversité Sorbonne Paris NordClémentFrance
| | - Maria Cristina Lorenzi
- Laboratoire d’Ethologie Expérimentale et ComparéeUR 4443LEECUniversité Sorbonne Paris NordClémentFrance
| | - James K. Wetterer
- Harriet L. Wilkes Honors CollegeFlorida Atlantic UniversityJupiterFloridaUSA
| | - Alejandro Zaldívar‐Riverón
- Colección Nacional de InsectosInstituto de BiologíaUniversidad Nacional Autónoma de MéxicoCiudad de MéxicoMéxico
| |
Collapse
|
13
|
Zalmat AS, Sotola VA, Nice CC, Martin NH. Genetic structure in Louisiana Iris species reveals patterns of recent and historical admixture. AMERICAN JOURNAL OF BOTANY 2021; 108:2257-2268. [PMID: 34618352 DOI: 10.1002/ajb2.1758] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 08/10/2021] [Accepted: 08/18/2021] [Indexed: 06/13/2023]
Abstract
PREMISE When divergent lineages come into secondary contact, reproductive isolation may be incomplete, thus providing an opportunity to investigate how speciation is manifested in the genome. The Louisiana Irises (Iris, series Hexagonae) comprise a group of three or more ecologically and reproductively divergent lineages that can produce hybrids where they come into contact. We estimated standing genetic variation to understand the current distribution of population structure in the Louisiana Irises. METHODS We used genotyping-by-sequencing techniques to sample the genomes of Louisiana Iris species across their ranges. We sampled 20 populations (n = 632 individuals) across 11,249 loci and used Entropy and PCA models to assess population genetic data. RESULTS We discovered evidence for interspecific gene flow in parts of the range. Our analysis revealed patterns of population structure at odds with widely accepted nominal taxonomy. We discovered undescribed hybrid populations, designated as belonging to the I. brevicaulis lineage. Iris nelsonii shared significant ancestry with only one of the purported parent species, I. fulva, evidence inconsistent with a hybrid origin. CONCLUSIONS This study provides several key findings important to the investigation of standing genetic variation in the Louisiana Iris species complex. Compared to the other nominal species, I. brevicaulis contains a large amount of genetic diversity. In addition, we discovered a previously unknown hybrid zone between I. brevicaulis and I. hexagona along the Texas coast. Finally, our results do not support the long-standing hypothesis that I. nelsonii has mixed ancestry from three parental taxa.
Collapse
Affiliation(s)
- Alexander S Zalmat
- Department of Biology, Texas State University, San Marcos, Texas, 78666-0202, USA
| | - V Alex Sotola
- Department of Genetics, University of Georgia, Athens, Georgia, 30602-7223, USA
| | - Chris C Nice
- Department of Biology, Texas State University, San Marcos, Texas, 78666-0202, USA
| | - Noland H Martin
- Department of Biology, Texas State University, San Marcos, Texas, 78666-0202, USA
- Director of the Population and Conservation Biology Program, Department of Biology, Texas State University, San Marcos, Texas, 78666-0202, USA
| |
Collapse
|
14
|
Poveda-Martínez D, Varone L, Fuentes Corona M, Hight S, Logarzo G, Hasson E. Spatial and host related genomic variation in partially sympatric cactophagous moth species. Mol Ecol 2021; 31:356-371. [PMID: 34662480 DOI: 10.1111/mec.16232] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Revised: 10/06/2021] [Accepted: 10/11/2021] [Indexed: 01/17/2023]
Abstract
Surveys of patterns of genetic variation in natural sympatric and allopatric populations of recently diverged species are necessary to understand the processes driving intra- and interspecific diversification. The South American moths Cactoblastis cactorum, Cactoblastis doddi and Cactoblastis bucyrus are specialized in the use of cacti as host plants. These species have partially different geographic ranges and differ in patterns of host plant use. However, there are areas that overlap, particularly, in northwestern Argentina, where they are sympatric. Using a combination of genome-wide SNPs and mitochondrial data we assessed intra and interspecific genetic variation and investigated the relative roles of geography and host plants on genetic divergence. We also searched for genetic footprints of hybridization between species. We identified three well delimited species and detected signs of hybridization in the area of sympatry. Our results supported a hypothetical scenario of allopatric speciation in the generalist C. cactorum and genetic interchange during secondary geographic contact with the pair of specialists C. bucyrus and C. doddi that probably speciated sympatrically. In both cases, adaptation to new host plants probably played an important role in speciation. The results also suggested the interplay of geography and host plant use as drivers of divergence and limiting gene flow at intra and interspecific levels.
Collapse
Affiliation(s)
- Daniel Poveda-Martínez
- Fundación para el Estudio de Especies Invasivas (FuEDEI), Hurlingham, Buenos Aires, Argentina.,Instituto de Ecología Genética y Evolución de Buenos Aires (IEGEBA), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.,Grupo de investigación en Evolución, Ecología y Conservación (EECO), Universidad del Quindío, Armenia, Colombia.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - Laura Varone
- Fundación para el Estudio de Especies Invasivas (FuEDEI), Hurlingham, Buenos Aires, Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - Malena Fuentes Corona
- Fundación para el Estudio de Especies Invasivas (FuEDEI), Hurlingham, Buenos Aires, Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| | - Stephen Hight
- Insect Behavior and Biocontrol Research Unit (IBBRU), USDA-ARS, Tallahassee, Florida, USA
| | - Guillermo Logarzo
- Fundación para el Estudio de Especies Invasivas (FuEDEI), Hurlingham, Buenos Aires, Argentina
| | - Esteban Hasson
- Instituto de Ecología Genética y Evolución de Buenos Aires (IEGEBA), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina
| |
Collapse
|
15
|
Geographic patterns of genomic variation in the threatened Salado salamander, Eurycea chisholmensis. CONSERV GENET 2021. [DOI: 10.1007/s10592-021-01364-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
16
|
Gompert Z, Springer A, Brady M, Chaturvedi S, Lucas LK. Genomic time-series data show that gene flow maintains high genetic diversity despite substantial genetic drift in a butterfly species. Mol Ecol 2021; 30:4991-5008. [PMID: 34379852 DOI: 10.1111/mec.16111] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Revised: 07/09/2021] [Accepted: 07/19/2021] [Indexed: 11/29/2022]
Abstract
Effective population size affects the efficacy of selection, rate of evolution by drift, and neutral diversity levels. When species are subdivided into multiple populations connected by gene flow, evolutionary processes can depend on global or local effective population sizes. Theory predicts that high levels of diversity might be maintained by gene flow, even very low levels of gene flow, consistent with species long-term effective population size, but tests of this idea are mostly lacking. Here, we show that Lycaeides buttery populations maintain low contemporary (variance) effective population sizes (e.g., ~200 individuals) and thus evolve rapidly by genetic drift. In contrast, populations harbored high levels of genetic diversity consistent with an effective population size several orders of magnitude larger. We hypothesized that the differences in the magnitude and variability of contemporary versus long-term effective population sizes were caused by gene flow of sufficient magnitude to maintain diversity but only subtly affect evolution on generational time scales. Consistent with this hypothesis, we detected low but non-trivial gene flow among populations. Furthermore, using short-term population-genomic time-series data, we documented patterns consistent with predictions from this hypothesis, including a weak but detectable excess of evolutionary change in the direction of the mean (migrant gene pool) allele frequencies across populations, and consistency in the direction of allele frequency change over time. The documented decoupling of diversity levels and short-term change by drift in Lycaeides has implications for our understanding of contemporary evolution and the maintenance of genetic variation in the wild.
Collapse
Affiliation(s)
- Zachariah Gompert
- Department of Biology, Utah State University, Logan, UT, 84322, USA.,Ecology Center, Utah State University, Logan, UT, 84322, USA
| | - Amy Springer
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Megan Brady
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Samridhi Chaturvedi
- Department of Biology, Utah State University, Logan, UT, 84322, USA.,Department of Organismic & Evolutionary Biology, Harvard University, Cambridge, MA, 02138, USA
| | - Lauren K Lucas
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| |
Collapse
|
17
|
Zhang L, Hood GR, Carroo I, Ott JR, Egan SP. Context-Dependent Reproductive Isolation: Host Plant Variability Drives Fitness of Hybrid Herbivores. Am Nat 2021; 197:732-739. [PMID: 33989147 DOI: 10.1086/714139] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractThe role of divergent selection between alternative environments in promoting reproductive isolation (RI) between lineages is well recognized. However, most studies view each divergent environment as homogenous, thereby overlooking the potential role within-environment variation plays in RI between differentiating lineages. Here, we test the importance of microenvironmental variation in RI by using individual trees of two host plants, each harboring locally adapted populations of the cynipid wasp Belonocnema treatae. We compared the fitness surrogate (survival) of offspring from hybrid crosses with resident crosses across individual trees on each of two primary host plants, Quercus virginiana and Q. geminata. We found evidence of weak hybrid inviability between host-associated lineages of B. treatae despite strong genomic differentiation. However, averaging across environments masked great variation in hybrid fitness on individual trees, where hybrids performed worse than, equal to, or better than residents. Thus, considering the environmental context of hybridization is critical to improving the predictability of divergence under variable selection.
Collapse
|
18
|
Zhang YM, Egan SP, Driscoe AL, Ott JR. One hundred and sixty years of taxonomic confusion resolved: Belonocnema (Hymenoptera: Cynipidae: Cynipini) gall wasps associated with live oaks in the USA. Zool J Linn Soc 2021. [DOI: 10.1093/zoolinnean/zlab001] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Abstract
Gall wasps (Hymenoptera: Cynipidae) in the genus Belonocnema induce galls on live oaks (Quercus series Virentes), forming multilocular root galls in the sexual generation and unilocular leaf galls in the asexual generation. Using morphological characters, host records, museum specimens, flight propensity and phylogenetic analysis of published cytochrome c oxidase subunit I (COI) and nuclear SNP data, we resolve the long-standing taxonomic confusion within Belonocnema and recognize three distinct species that are distributed throughout the southern and south-eastern USA: B. fossoria (rev. stat.), B. kinseyi (rev. stat.) and B. treatae, while B. quercusvirens is treated as species inquirenda. The presence of mitonuclear discordance results in the failure of a mitochondrial DNA barcode region to distinguish between B. fossoria and B. treatae, while recognizing B. kinseyi, despite the three species being clearly separated based on morphology and phylogenetic analysis of SNP data. We provide re-descriptions and an updated dichotomous key for both asexual and sexual generations of these widespread species. Finally, as Belonocnema has emerged as a model organism for ecological and evolutionary studies, we clarify the species examined in published studies to date.
Collapse
Affiliation(s)
- Y Miles Zhang
- Systematic Entomology Laboratory, USDA-ARS, c/o National Museum of Natural History, Washington, DC, USA
| | - Scott P Egan
- Department of Biosciences, Rice University, Houston, TX, USA
| | - Amanda L Driscoe
- Department of Biology, Population and Conservation Biology Program, Texas State University, San Marcos, TX, USA
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - James R Ott
- Department of Biology, Population and Conservation Biology Program, Texas State University, San Marcos, TX, USA
| |
Collapse
|
19
|
Zhang L, Hood GR, Roush AM, Shzu SA, Comerford MS, Ott JR, Egan SP. Asymmetric, but opposing reductions in immigrant viability and fecundity promote reproductive isolation among host-associated populations of an insect herbivore. Evolution 2020; 75:476-489. [PMID: 33330984 DOI: 10.1111/evo.14148] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 11/27/2020] [Accepted: 12/11/2020] [Indexed: 01/04/2023]
Abstract
Immigrant inviability can contribute to reproductive isolation (RI) during ecological speciation by reducing the survival of immigrants in non-native environments. However, studies that assess the fitness consequence of immigrants moving from native to non-native environments typically fail to explore the potential role of concomitant reductions in immigrant fecundity despite recent evidence suggesting its prominent role during local adaptation. Here, we evaluate the directionality and magnitude of both immigrant viability and fecundity to RI in a host-specific gall-forming wasp, Belonocnema treatae. Using reciprocal transplant experiments replicated across sites, we measure immigrant viability and fecundity by comparing differences in the incidence of gall formation (viability) and predicted the number of eggs per female (fecundity) between residents and immigrants in each of two host-plant environments. Reduced immigrant viability was found in one host environment while reduced immigrant fecundity was found in the other. Such habitat-dependent barriers resulted in asymmetric RI between populations. By surveying recent literature on local adaptation, we find that asymmetry in immigrant viability and fecundity are widespread across disparate taxa, which highlights the need to combine estimates of both common and overlooked barriers in cases of potential bi-directional gene flow to create a more comprehensive view of the evolution of RI.
Collapse
Affiliation(s)
- Linyi Zhang
- Department of BioSciences, Rice University, Houston, Texas, 77005
| | - Glen R Hood
- Department of BioSciences, Rice University, Houston, Texas, 77005.,Department of Biological Sciences, Wayne State University, Detroit, Michigan, 48202
| | - Amy M Roush
- Department of BioSciences, Rice University, Houston, Texas, 77005
| | - Shih An Shzu
- Department of BioSciences, Rice University, Houston, Texas, 77005
| | | | - James R Ott
- Population and Conservation Biology Program, Department of Biology, Texas State University, San Marcos, Texas, 78666
| | - Scott P Egan
- Department of BioSciences, Rice University, Houston, Texas, 77005
| |
Collapse
|
20
|
Poveda-Martínez D, Aguirre MB, Logarzo G, Hight SD, Triapitsyn S, Diaz-Sotero H, Diniz Vitorino M, Hasson E. Species complex diversification by host plant use in an herbivorous insect: The source of Puerto Rican cactus mealybug pest and implications for biological control. Ecol Evol 2020; 10:10463-10480. [PMID: 33072273 PMCID: PMC7548167 DOI: 10.1002/ece3.6702] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Revised: 07/28/2020] [Accepted: 07/29/2020] [Indexed: 01/06/2023] Open
Abstract
Cryptic taxa have often been observed in the form of host‐associated species that diverged as the result of adaptation to alternate host plants. Untangling cryptic diversity in species complexes that encompass invasive species is a mandatory task for pest management. Moreover, investigating the evolutionary history of a species complex may help to understand the drivers of their diversification. The mealybug Hypogeococcus pungens was believed to be a polyphagous species from South America and has been reported as a pest devastating native cacti in Puerto Rico, also threatening cactus diversity in the Caribbean and North America. There is neither certainty about the identity of the pest nor the source population from South America. Recent studies pointed to substantial genetic differentiation among local populations, suggesting that H. pungens is a species complex. In this study, we used a combination of genome‐wide SNPs and mtDNA variation to investigate species diversity within H. pungens sensu lato to establish host plant ranges of each one of the putative members of the complex, to evaluate whether the pattern of host plant association drove diversification in the species complex, and to determine the source population of the Puerto Rican cactus pest. Our results suggested that H. pungens comprises at least five different species, each one strongly associated with specific host plants. We also established that the Puerto Rican cactus pest derives from southeastern Brazilian mealybugs. This is an important achievement because it will help to design reliable strategies for biological control using natural enemies of the pest from its native range.
Collapse
Affiliation(s)
- Daniel Poveda-Martínez
- Fundación para el Estudio de Especies Invasivas (FuEDEI) Hurlingham Argentina.,Instituto de Ecología Genética y Evolución de Buenos Aires (IEGEBA) Departamento de Ecología Genética y Evolución Universidad de Buenos Aires Buenos Aires Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) Ciudad Autónoma de Buenos Aires Argentina.,Grupo de investigación en Evolución, Ecología y Conservación (EECO) Universidad del Quindío Armenia Colombia
| | - María Belén Aguirre
- Fundación para el Estudio de Especies Invasivas (FuEDEI) Hurlingham Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) Ciudad Autónoma de Buenos Aires Argentina
| | - Guillermo Logarzo
- Fundación para el Estudio de Especies Invasivas (FuEDEI) Hurlingham Argentina
| | | | | | - Hilda Diaz-Sotero
- Caribbean Advisor to the APHIS Administrator USDA San Juan Puerto Rico
| | - Marcelo Diniz Vitorino
- Departamento de Engenharia Florestal Programa de Pós-graduação em Engenharia Florestal - PPGEF Lab. de Monitoramento e Proteção Florestal - LAMPF Universidade Regional de Blumenau - FURB Blumenau Brazil
| | - Esteban Hasson
- Instituto de Ecología Genética y Evolución de Buenos Aires (IEGEBA) Departamento de Ecología Genética y Evolución Universidad de Buenos Aires Buenos Aires Argentina.,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) Ciudad Autónoma de Buenos Aires Argentina
| |
Collapse
|
21
|
Large-scale genetic admixture suggests high dispersal in an insect pest, the apple fruit moth. PLoS One 2020; 15:e0236509. [PMID: 32785243 PMCID: PMC7423104 DOI: 10.1371/journal.pone.0236509] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Accepted: 07/07/2020] [Indexed: 11/25/2022] Open
Abstract
Knowledge about population genetic structure and dispersal capabilities is important for the development of targeted management strategies for agricultural pest species. The apple fruit moth, Argyresthia conjugella (Lepidoptera, Yponomeutidae), is a pre-dispersal seed predator. Larvae feed on rowanberries (Sorbus aucuparia), and when rowanberry seed production is low (i.e., inter-masting), the moth switches from laying eggs in rowanberries to apples (Malus domestica), resulting in devastating losses in apple crops. Using genetic methods, we investigated if this small moth expresses any local genetic structure, or alternatively if gene flow may be high within the Scandinavian Peninsula (~850.000 km2, 55o - 69o N). Genetic diversity was found to be high (n = 669, mean He = 0.71). For three out of ten tetranucleotide STRs, we detected heterozygote deficiency caused by null alleles, but tests showed little impact on the overall results. Genetic differentiation between the 28 sampling locations was very low (average FST = 0.016, P < 0.000). Surprisingly, we found that all individuals could be assigned to one of two non-geographic genetic clusters, and that a third, geographic cluster was found to be associated with 30% of the sampling locations, with weak but significant signals of isolation-by-distance. Conclusively, our findings suggest wind-aided dispersal and spatial synchrony of both sexes of the apple fruit moth over large areas and across very different climatic zones. We speculate that the species may recently have had two separate genetic origins caused by a genetic bottleneck after inter-masting, followed by rapid dispersal and homogenization of the gene pool across the landscape. We suggest further investigations of spatial genetic similarities and differences of the apple fruit moth at larger geographical scales, through life-stages, across inter-masting, and during attacks by the parasitoid wasp (Microgaster politus).
Collapse
|
22
|
Doellman MM, Schuler H, Jean GS, Hood GR, Egan SP, Powell THQ, Glover MM, Bruzzese DJ, Smith JJ, Yee WL, Goughnour RB, Rull J, Aluja M, Feder JL. Geographic and Ecological Dimensions of Host Plant-Associated Genetic Differentiation and Speciation in the Rhagoletis cingulata (Diptera: Tephritidae) Sibling Species Group. INSECTS 2019; 10:E275. [PMID: 31470668 PMCID: PMC6780410 DOI: 10.3390/insects10090275] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 08/26/2019] [Accepted: 08/27/2019] [Indexed: 11/17/2022]
Abstract
Ascertaining the causes of adaptive radiation is central to understanding how new species arise and come to vary with their resources. The ecological theory posits adaptive radiation via divergent natural selection associated with novel resource use; an alternative suggests character displacement following speciation in allopatry and then secondary contact of reproductively isolated but ecologically similar species. Discriminating between hypotheses, therefore, requires the establishment of a key role for ecological diversification in initiating speciation versus a secondary role in facilitating co-existence. Here, we characterize patterns of genetic variation and postzygotic reproductive isolation for tephritid fruit flies in the Rhagoletis cingulata sibling species group to assess the significance of ecology, geography, and non-adaptive processes for their divergence. Our results support the ecological theory: no evidence for intrinsic postzygotic reproductive isolation was found between two populations of allopatric species, while nuclear-encoded microsatellites implied strong ecologically based reproductive isolation among sympatric species infesting different host plants. Analysis of mitochondrial DNA suggested, however, that cytoplasmic-related reproductive isolation may also exist between two geographically isolated populations within R cingulata. Thus, ecology associated with sympatric host shifts and cytoplasmic effects possibly associated with an endosymbiont may be the key initial drivers of the radiation of the R. cingulata group.
Collapse
Affiliation(s)
- Meredith M Doellman
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA.
| | - Hannes Schuler
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
- Current Address: Faculty of Science and Technology, Free University of Bozen-Bolzano, 39100 Bozen-Bolzano, Italy
| | - Gilbert Saint Jean
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
| | - Glen R Hood
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
- Current Address: Department of Biological Sciences, Wayne State University, Detroit, MI 48202, USA
| | - Scott P Egan
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
- Advanced Diagnostics and Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA
- Current Address: Department of Ecology and Evolutionary Biology, Rice University, Houston, TX 77088, USA
| | - Thomas H Q Powell
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
- Current Address: Department of Biological Sciences, Binghamton University, Binghamton, NY 13902, USA
| | - Mary M Glover
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
| | - Daniel J Bruzzese
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
| | - James J Smith
- Michigan State University, Department of Entomology and Lyman Briggs College, East Holmes Hall, E. Lansing, MI 48824, USA
| | - Wee L Yee
- United States Department of Agriculture, Agricultural Research Service, Temperate Tree Fruit and Vegetable Research Unit, 5230 Konnowac Pass Road, Wapato, WA 98951, USA
| | - Robert B Goughnour
- Washington State University Extension, 1919 NE 78th Street, Vancouver, WA 98665, USA
| | - Juan Rull
- PROIMI Biotecnología-CONICET, LIEMEN-División Control Biológico de Plagas, Av. Belgrano y Pje. Caseros, T4001MVB San Miguel de Tucumán, Tucumán, Argentina
| | - Martin Aluja
- Instituto de Ecología, A.C., Carretera Antigua a Coatepec no. 351, Congregación el Haya, C.P. 91070 Xalapa, Veracruz, México
| | - Jeffrey L Feder
- Department of Biological Sciences, Galvin Life Sciences Bldg., University of Notre Dame, Notre Dame, IN 46556, USA
- Advanced Diagnostics and Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA
- Environmental Change Initiative, University of Notre Dame, Notre Dame, IN 46556, USA
| |
Collapse
|