Physical dormancy in seeds: a game of hide and seek?

Sleeping but not defenceless: seed dormancy and protection

To ensure their vital role in disseminating the species, dormant seeds have developed adaptive strategies to protect themselves against pathogens and predators. This is orchestrated through the synthesis of an array of constitutive defences that are put in place in a developmentally regulated manner, which are the focus of this review. We summarize the defence activity and the nature of the molecules coming from the exudate of imbibing seeds that leak into their vicinity, also referred to as the spermosphere. As a second layer of protection, the dual role of the seed coat will be discussed; as a physical barrier and a multi-layered reservoir of defence compounds that are synthesized during seed development. Since imbibed dormant seeds can persist in the soil for extensive periods, we address the question of whether during this time a constitutively regulated defence programme is switched on to provide further protection, via the well-defined pathogenesis-related (PR) protein family. In addition, we review the hormonal and signalling pathways that might be involved in the interplay between dormancy and defence and point out questions that need further attention.

Proteomic evidence for seed odor modifying olfaction and spatial memory in a scatter-hoarding animal

Seed odor plays a crucial role in affecting the scatter-hoarding behavior of small rodents that rely on spatial memory and olfaction to cache and recover. However, evidence of how seed odor modifies olfaction function and spatial memory is still lacking. Here, we coated seeds with waterproof glue to test how seed odor intensity alters the proteome of both the olfactory bulbs and hippocampus of a dominant scatter-hoarding rodent, Leopoldamys edwardsi, in Southwest China. We showed that animals repeatedly caching and recovering weak odor seeds exhibited greater olfactory ability and spatial memory, as indicated by alterations in the protein profiles of the olfactory bulbs and hippocampus. The upregulation of proteins closely related to neural connections between the olfactory bulb and hippocampus is highly responsible for improved olfactory function and spatial memory. Our study provides new insights into how scatter-hoarding rodents manage and respond to cached seeds differing in odor intensity from a neurobiological perspective, which is of significant importance for better understanding the parallel evolution of the olfactory and hippocampal systems.

Evolutionary pathways to lower biomass allocation to the seed coat in crops: insights from allometric scaling

Crops generally have seeds larger than their wild progenitors´ and with reduced dormancy. In wild plants, seed mass and allocation to the seed coat (a proxy for physical dormancy) scale allometrically so that larger seeds tend to allocate less to the coats. Larger seeds and lightweight coats might thus have evolved as correlated traits in crops. We tested whether 34 crops and 22 of their wild progenitors fit the allometry described in the literature, which would indicate co-selection of both traits during crop evolution. Deviations from the allometry would suggest that other evolutionary processes contribute to explain the emergence of larger, lightweight-coated seeds in crops. Crops fitted the scaling slope but deviated from its intercept in a consistent way: Seed coats of crops were lighter than expected by their seed size. The wild progenitors of crops displayed the same trend, indicating that deviations cannot be solely attributed to artificial selection during or after domestication. The evolution of seeds with small coats in crops likely resulted from a combination of various pressures, including the selection of wild progenitors with coats smaller than other wild plants, further decreases during early evolution under cultivation, and indirect selection due to the seed coat-seed size allometry.

Research advances on the hard seededness trait of soybean and the underlying regulatory mechanisms

Soybean is one of the world's most economically significant crops and is widely utilized as an essential source of vegetable protein and edible oil. Cultivated soybean is domesticated from its annual counterpart, wild soybean, which is considered valuable germplasm for soybean breeding. However, wild soybean accessions generally produce seeds with impermeable coats, a trait known as hard seededness (HS), which is beneficial for long-term seed survival but is undesirable for the uniform water absorption and germination of seeds, thus limiting the utilization of wild soybeans in breeding. In addition, moderate HS can isolate the embryo from the surrounding environment and is thus beneficial for long-term seed storage and germplasm preservation. The HS trait is primarily associated with the structure and chemical composition of the seed coat. Moreover, its development is also influenced by various environmental conditions, such as water and temperature. Genetic analysis has revealed that HS of soybean is a complex quantitative trait controlled by multiple genes or minor quantitative trait loci (QTL), with many QTLs and several causal genes currently identified. Investigating the physiological and molecular mechanisms underlying this trait is crucial for soybean breeding, production, and food processing. For this article, the literature was reviewed and condensed to create a well-rounded picture of the current understanding of internal and external factors, QTLs, causal genes, and the regulatory mechanisms related to the HS of soybean, with the aim of providing reference for future research and utilization of this trait.

Evolutionary reversal of physical dormancy to nondormancy: evidence from comparative seed morphoanatomy of Argyreia species (Convolvulaceae)

Argyreia is the most recently evolved genus in the Convolvulaceae, and available information suggests that most species in this family produce seeds with physical dormancy (PY). Our aim was to understand the evolution of seed dormancy in this family via an investigation of dormancy, storage behaviour, morphology and anatomy of seeds of five Argyreia species from Sri Lanka. Imbibition, germination and dye tracking of fresh intact and manually scarified seeds were studied. Scanning electron micrographs and hand sections of the hilar area and the seed coat away from the hilar area were compared. Scarified and intact seeds of A. kleiniana, A. hirsuta and A. zeylanica imbibed water and germinated to a high percentage, but only scarified seeds of A. nervosa and A. osyrensis did so. Thus, seeds of the three former species are non-dormant (ND), while those of the latter two have physical dormancy (PY); this result was confirmed by dye-tracking experiments. Since >90% of A. kleiniana, A. hirsuta and A. zeylanica seeds survived desiccation to 10% moisture content (MC) and >90% of A. nervosa and A. osyrensis seeds with a dispersal MC of ~12% were viable, seeds of the five species were desiccation-tolerant. A. nervosa and A. osyrensis have a wide geographical distribution and PY, while A. kleiniana, A. hirsuta and A. zeylanica have a restricted distribution and ND. Although seeds of A. kleiniana are ND, their seed coat anatomy is similar to that of A. osyrensis with PY. These observations suggest that the ND of A. kleiniana, A. hirsuta and A. zeylanica seeds is the result of an evolutionary reversal from PY and that ND may be an adaptation of these species to the environmental conditions of their wet aseasonal habitats.

Physical Seed Dormancy in Legumes: Molecular Advances and Perspectives

Physical dormancy of seeds is a form of dormancy due to the presence of an impermeable seed coat layer, and it represents a feature for plants to adapt to environmental changes over an extended period of phylogenetic evolution. However, in agricultural practice, physical dormancy is problematic. because it prevents timely and uniform seed germination. Therefore, physical dormancy is an important agronomical trait to target in breeding and domestication, especially for many leguminous crops. Compared to the well-characterized physiological dormancy, research progress on physical dormancy at the molecular level has been limited until recent years, due to the lack of suitable research materials. This review focuses on the structure of seed coat, factors affecting physical dormancy, genes controlling physical dormancy, and plants suitable for studying physical dormancy at the molecular level. Our goal is to provide a plethora of information for further molecular research on physical dormancy.

Ascorbic acid releases dormancy and promotes germination by an integrated regulation of abscisic acid and gibberellin in Pyrus betulifolia seeds

Seed dormancy is an important life history state in which intact viable seeds delay or prevent germination under suitable conditions. Ascorbic acid (AsA) acts as a small molecule antioxidant, and breaking seed dormancy and promoting subsequent growth are among its numerous functions. In this study, a germination test using Pyrus betulifolia seeds treated with exogenous AsA or AsA synthesis inhibitor lycorine (Lyc) and water absorption was conducted. The results indicated that AsA released dormancy and increased germination and 20 mmol L-1 AsA promoted cell division, whereas Lyc reduced germination. Seed germination showed typical three phases of water absorption; and seeds at five key time points were sampled for transcriptome analysis. It revealed that multiple pathways were involved in breaking dormancy and promoting germination through transcriptome data, and 12 differentially expressed genes (DEGs) related to the metabolism and signal transduction of abscisic acid (ABA) and gibberellins (GA) were verified by subsequent RT-qPCR. For metabolites, exogenous AsA increased endogenous AsA and GA3 but reduced ABA and the ABA/GA3 ratio. In addition, three genes regulating ABA synthesis were downregulated by AsA, while five genes mediating ABA degradation were upregulated. Taken together, AsA regulates the pathways associated with ABA and GA synthesis, catalysis, and signal transduction, with subsequent reduction in ABA and increase in GA and further the balance of ABA/GA, ultimately releasing dormancy and promoting germination.

Dormancy, germination, and associated seed ecological traits of 25 Fabaceae species from northern India

Fabaceae produce seeds with water-impermeable seed coats, i.e., physical dormancy (PY). We hypothesized that the proportion of PY seeds will increase with the dryness of the habitat, and some key seed ecological traits will be strongly associated with different levels of PY. Fresh seed of 25 Fabaceae species collected in northern India were used for imbibition and germination experiments to determine the proportion of seeds with PY and of nondormant (ND) seeds compared to their Sri Lankan congeners. Seed coat:seed mass ratio (SCR), 1000 seed weight, seed shape index (SSI), embryo type and median germination time of ND seeds were determined. Four imbibition and germination patterns were identified among seeds of the studied species. Seeds collected from Indian populations had a higher proportion of PY seeds than those of Sri Lankan populations. We identified a type of embryo called 'spatulate axile' that had not been identified before among the studied species. Species with ND seeds had a lower SCR and a higher SSI than those with PY. Our hypothesis was confirmed since populations from drier habitats in India produce a higher proportion of PY seeds than those from Sri Lanka. A low SCR ensures minimal resistance to germinating seeds, while seeds with a high SSI have a lower tendency to incorporate into the soil seed bank. Thus, these seed traits aid the fast germination of ND seeds, often dispersed just before the rainy season.

A long-term experiment reveals no trade-off between seed persistence and seedling emergence

Information on seed persistence and seedling emergence from the soil seed bank is critical for understanding species coexistence and predicting community dynamics. However, quantifying seed persistence in the soil is challenging; thus, its association with other life-history traits is poorly known on a broad scale. Using germination phenology for 349 species in a 42-yr experiment, we quantified the persistence-emergence correlations and their associations with intrinsic regeneration traits using Bayesian phylogenetic multilevel models. We showed no trade-off between seed persistence and seedling emergence. Physically dormant seeds were more persistent but exhibited lower emergence than nondormant seeds. Monocarpic species had both higher persistence and emergence than polycarpic species. Seed mass posed a marginal proxy for persistence, while emergence almost doubled from the smallest to the largest seeds. This study challenges the traditional assumption and is the first demonstration of noncorrelation between persistence and emergence, probably owing to the complexity of regenerative strategies. Species with short persistence and low emergence would be the most vulnerable for in situ conservation. Our analyses of this unique, long-term dataset provide a strong incentive for further experimental studies and a rich data resource for future syntheses.

Decoding the decisive role of seed moisture content in physical dormancy break: filling the missing links

Species producing seeds with a water-impermeable seed coat, i.e., physical dormancy (PY), dominate the dry tropical forests. Despite increasing interest and understanding of the germination ecology of a PY species, less is known about how PY break occurs, particularly what changes lead to the opening of the 'water gap'. Based on the moisture conent (MC) attained, two ranges of PY may exist: shallow PY, a state with higher MC and seeds could reverse to a permeable state when the relative humidity increases; and absolute PY, a completely dry state. Here, we demonstrate that this MC variation between seeds affects preconditioning and the 'water-gap' opening stages. A conceptual model developed shows a strong relationship between temperature and duration, with high temperature breaking PY in seconds, but seasonal temperature fluctuations and constant temperatures require a longer time. The duration required at any conditions to break PY is purported to depend on the hydrophobic bonds of the lipids, which are likely weakened during the preconditioning, and the amount of water influences hydrolysis, leading to the 'water-gap' opening. We argue that the moisture content of the seeds and its interaction with biochemical compounds are a possible explanation for why only a proportion of PY seeds become permeable to water each year. Nonetheless, empirical investigations must validate these notions.

Seed biopriming for sustainable agriculture and ecosystem restoration

The utilization of microbial inoculants in the realm of sustainable agricultural and ecosystem restoration has witnessed a surge in recent decades. This rise is largely attributed to advancements in our understanding of plant-microbe interactions, the urgency to reduce the dependence on agrochemicals and the growing societal demand for sustainable strategies in ecosystem management. However, despite the rapid growth of bio-inoculants sector, certain limitations persist concerning their efficacy and performance under the field condition. Here, we propose that seed biopriming, an effective microbial inoculant technique integrating both biological agents (the priming of beneficial microbes on seeds) and physiological aspects (hydration of seeds for improved metabolically activity), has a significant potential to mitigate these limitations. This method increases the protection of seeds against soil-borne pathogens and soil pollutants, such as salts and heavy metals, while promoting germination rate and uniformity, leading to overall improved primary productivity and soil health. Furthermore, we argue that a microbial coating on seeds can facilitate transgenerational associations of beneficial microbes, refine plant and soil microbiomes, and maintain soil legacies of beneficial microflora. This review article aims to improve our understanding of the seed biopriming approach as a potent and valuable tool in achieving sustainable agriculture and successful ecosystem restoration.

Plant hormones mediate the interaction between oak acorn germination and rodent hoarding behaviour

The interaction between animals and plants for seed dispersal and predation has received much attention; however, the underlying physiological mechanisms driving the responses of both seeds and animals remain unclear. We conducted a series of behaviour and physiology experiments to examine the role of plant hormones in regulating seed germination and rodent hoarding behaviour in the Quercus variabilis and Leopoldamys edwardsi systems. We found that acorns that were partially consumed by rodents had increased gibberellin (GA) levels and shortened germination time. Rodents preferred scatter-hoarded abscisic acid (ABA)-treated and intact acorns but consumed germinated and GA-treated acorns; such treatment differences disappeared for inactivated acorns by boiling water. Moreover, we found that seven potential compounds may be linked to seed germination and rodent hoarding behaviour. Our results indicate that acorns of oak showed rapid germination when facing predation risk, while rodents could identify the germination status of seeds for hoarding; GA and ABA may play an important role in regulating seed germination of oak and hoarding behaviour of rodents.

Seed mucilage as a defense against granivory is influenced by substrate characters

Many seeds are consumed by granivores despite numerous adaptations to prevent detection or exploitation. The environment can influence the efficacy of these defensive traits. Understanding the mechanisms by which environmental factors modify defensive efficacy is important for understanding spatial patterns of granivory and seed recruitment. Seed mucilage is a sticky coating that binds imbibed seeds to substrates; this attachment has been demonstrated to lessen exploitation by granivores. Seed mucilage as a defense has been recognized for decades, though rarely studied. Here, we investigated whether the environment alters this seed defense by addressing two questions: (1) Does substrate particle size affect attachment strength? (2) Does a change in particle size lead to changes in granivore-related mortality? In the field experiment, ants removed more seeds from finer substrates than their coarser counterparts. Across that same grit range, seeds took less force to dislodge when mucilage-bound to fine sandpaper; however, an investigation across a wider range of grits demonstrated nonlinearities occurred for many species, probably due to structural and chemical mucilage properties. Small differences in substrate grit lead to differential mortality in mucilaginous seeds due to alterations in attachment strength, suggesting that the defensive efficacy of this trait differs across the landscape. This work paves the way for a more integrative look at mucilaginous seeds. Seed mucilage is a widespread trait that is easily studied and has important demographic implications. It represents an ideal system to examine dispersal, germination, and granivory to gain a more holistic view of seed ecology.

The metagenomics of soil bacteria and fungi and the release of mechanical dormancy in hard seeds

Persistence in the soil is a function of seed physiology, particularly non-germination and inherent lifespan. However, for seeds with mechanical dormancy, non-germination is also a function of the composition and activity of the soil microbiota. We attempted to screen out microorganisms in the soil that can specifically and rapidly decompose the hard fruit pericarps of Tilia miqueliana Maxim., a unique native tree species in China. Using the classical replica plating method, more than 100 different culturable microorganisms that could rapidly erode the pericarp were collected from the surface of pericarps under different culture conditions. At the same time, we successfully extended the concept of metagenomics and applied it to the identification of mixed artificial cultures. The decomposition process of the pericarps in soil was also simulated artificially. The physical and chemical data suggested a potential mechanism of microbial scarification and cracking in pericarp, whilst the embryos inside the eroded fruits retained good viability. Our discoveries could pave the way for the removal of physical and mechanical obstacles that prevent hard coat seeds from germinating. We anticipate that the use of this technology will improve the germination of other hard coat seeds. More research is needed to investigate the impacts on other seeds. The findings of this research can inform the design of experiments on the seed ecology of persistence.

Uses, Botanical Characteristics, and Phenological Development of Slender Nightshade (Solanum nigrescens Mart. and Gal.)

Slender nightshade (Solanum nigrescens Mart. and Gal.) is a perennial, herbaceous plant from the Solanaceae family, which is distributed in various environments. The aim of this study was to review the scientific literature and to establish slender nightshade plants under greenhouse conditions in order to record their phenological development. The specialized literature regarding the distribution, botanical characteristics, and uses of such species was analyzed. The phenological development was recorded based on the BBCH (Biologische Bundesanstalt, Bundessortenamt, Chemische Industrie) guide. Slender nightshade seeds were germinated under greenhouse conditions, then transferred to red porous volcano gravel locally known as tezontle in black polyethylene bags and watered with a Steiner nutrient solution. Changes in phenology were monitored and recorded from germination to the ripening of fruit and seeds. Slender nightshade has a wide distribution in Mexico and is used for medicinal and gastronomical purposes, as well as to control pathogens. The phenological development of slender nightshade has seven stages from germination to the ripening of fruit and seeds. Slender nightshade is a poorly studied plant with potential for human consumption. The phenological recording provides a tool for its management and further research as a crop.

Unravelling the paradox in physically dormant species: elucidating the onset of dormancy after dispersal and dormancy-cycling

BACKGROUND

For species that produce seeds with a water-impermeable coat, i.e. physical dormancy (PY), it has been widely recognized that (1) seeds shed at a permeable state cannot become impermeable after dispersal; and (2) dormancy-cycling, i.e. a permeable ↔ impermeable transition, does not occur. Given a tight relationship between moisture content and onset of seed-coat impermeability, seeds maturing at low relative humidity (RH) and occurring in a high-temperature environment are inferred to produce impermeable coats, and ex situ drying of permeable seeds can lead to the onset of impermeability.

SCOPE AND CONCLUSION

It is proposed here that permeable seeds dispersed at low RH and in high-temperature soils might become impermeable due to continuous drying. Similarly, seeds with shallow PY dormancy (with higher moisture content immediately after becoming impermeable) can cycle back to a permeable state or absolute PY (complete dry state) when RH increases or decreases, respectively. A conceptual model is developed to propose that seeds from several genera of 19 angiosperm families at the time of natural dispersal can be (1) impermeable (dormant), i.e. primary dormancy; (2) impermeable (dormant) and become permeable (non-dormant) and then enter a dormant state in the soil, often referred to as secondary dormancy; (3) permeable (non-dormant) and become impermeable (dormant) in the soil, i.e. enforced dormancy; or (4) dormant or non-dormant, but cycle between permeable and non-permeable states depending on the soil conditions, i.e. dormancy-cycling, which is different from sensitivity-cycling occurring during dormancy break. It is suggested that this phenomenon could influence the dormancy-breaking pattern, but detailed studies of this are lacking.

The loss of polyphenol oxidase function is associated with hilum pigmentation and has been selected during pea domestication

Seed coats serve as protective tissue to the enclosed embryo. As well as mechanical there are also chemical defence functions. During domestication, the property of the seed coat was altered including the removal of the seed dormancy. We used a range of genetic, transcriptomic, proteomic and metabolomic approaches to determine the function of the pea seed polyphenol oxidase (PPO) gene. Sequencing analysis revealed one nucleotide insertion or deletion in the PPO gene, with the functional PPO allele found in all wild pea samples, while most cultivated peas have one of the three nonfunctional ppo alleles. PPO functionality cosegregates with hilum pigmentation. PPO gene and protein expression, as well as enzymatic activity, was downregulated in the seed coats of cultivated peas. The functionality of the PPO gene relates to the oxidation and polymerisation of gallocatechin in the seed coat. Additionally, imaging mass spectrometry supports the hypothesis that hilum pigmentation is conditioned by the presence of both phenolic precursors and sufficient PPO activity. Taken together these results indicate that the nonfunctional polyphenol oxidase gene has been selected during pea domestication, possibly due to better seed palatability or seed coat visual appearance.

Rodent responses to volatile compounds provide insights into the function of floral scent in mammal-pollinated plants

Flowers pollinated by mammals have evolved in many plant families. Several scent compounds that attract bats to flowers have been identified, but the chemical ecology of pollination mutualisms between plants and ground-dwelling mammals is poorly understood. Rodents are key pollinators in South Africa and rely heavily on olfaction to locate food. Our aim was to identify compounds that may function to attract rodents to flowers. Eighteen volatile compounds, including 14 that are prominent in the scent of rodent-pollinated flowers, were used in choice experiments involving wild-caught individuals of four native rodent species. Rodents were generally attracted to oxygenated aliphatic compounds, specifically ketones and esters, but not to some aromatic compounds common in floral scents of insect-pollinated species, nor to a sulfide compound that is attractive to bats. Associative conditioning using sugar solution as a reward had only weak effects on the attractiveness of compounds to rodents. The attractive effect of some compounds disappeared when they were blended with compounds that did not attract rodents. We conclude that aliphatic ketones and esters are likely to play a key role in attracting rodents to flowers. Deployment of these compounds may allow plants to exploit rodent sensory bias that evolved in other contexts such as intra-specific communication and searching for seeds. This article is part of the theme issue 'Natural processes influencing pollinator health: from chemistry to landscapes'.

Nondormant Acorns Show Higher Seed Dispersal Effectiveness Than Dormant Ones

Seed dormancy has been thought to be an important survival strategy to tune the seed dispersal timing. Although a theoretical trade-off between seed dormancy and dispersal is often proposed, empirical field evidence of the trade-off between seed dormancy, spatial dispersal, and seedling recruitment is still lacking. Here, we tracked seed dispersal of several Fagaceae species exhibiting different levels of dormancy both in artificial enclosures and in the field. We presented evidence that oak species with nondormant acorns rather than those bearing dormant species exhibit reduced spatial dispersal. Despite the empirical evidence that seed germination is negatively correlated with spatial dispersal, nondormancy rather than dormancy showed higher seed dispersal effectiveness, demonstrating a negative correlation between seed dormancy and dispersal fitness. Our study, using the oak-rodent system, may provide solid evidence of a dispersal–germination trade-off between spatial and temporal correlation, highlighting the ecological role of seed germination schedule in seed dispersal and life-history evolution.

Current overview on the genetic basis of key genes involved in soybean domestication

Modern crops were created through the domestication and genetic introgression of wild relatives and adaptive differentiation in new environments. Identifying the domestication-related genes and unveiling their molecular diversity provide clues for understanding how the domesticated variants were selected by ancient people, elucidating how and where these crops were domesticated. Molecular genetics and genomics have explored some domestication-related genes in soybean (Glycine max). Here, we summarize recent studies about the quantitative trait locus (QTL) and genes involved in the domestication traits, introduce the functions of these genes, clarify which alleles of domesticated genes were selected during domestication. A deeper understanding of soybean domestication could help to break the bottleneck of modern breeding by highlighting unused genetic diversity not selected in the original domestication process, as well as highlighting promising new avenues for the identification and research of important agronomic traits among different crop species.

From Seed to Seedling: Influence of Seed Geographic Provenance and Germination Treatments on Reproductive Material Represented by Seedlings of Robinia pseudoacacia

The influence of the geographical origin of eight Romanian provenances of Robinia pseudoacacia on the characteristics of seeds, germination, and growth of seedlings in young stages of life was analyzed. Four experiments were undertaken to test seed germination (thermal treatment at distinct temperatures, mechanical scarification, acetone 90%, and biostimulator). The germination percentage showed that scarification treatment provided the best results among all treatments (41.7%). Seeds soaked in water at 100 °C provided the second-highest germination rate. Furthermore, the same two treatments also assured the highest values for the seedlings’ length. There were registered significant differences among the provenances for the analyzed characteristics, the seed germination capacity, and the growth rate of the seedlings in the first years of life. The study highlighted the resources that could ensure good quality of the reproductive forest material, which can be used in new afforestation and breeding programs. Pearson correlations and multivariate analysis provided interesting and useful information about R. pseudoacacia provenances and 13 characteristics of the seeds and seedlings, highlighting the relationship among them. The results could be of interest for the efficient use of forest genetic resources and the obtention of quality reproductive material in black locust.

Seed ecology of European mesic meadows

BACKGROUND AND AIMS

European mesic meadows are semi-natural open habitats of high biodiversity and an essential part of European landscapes. These species-rich communities can be a source of seed mixes for ecological restoration, urban greening and rewilding. However, limited knowledge of species germination traits is a bottleneck to the development of a competitive native seed industry. Here, we synthesize the seed ecology of mesic meadows.

METHODS

We combined our own experimental data with data obtained from databases to create a combined dataset containing 2005 germination records of 90 plant species from 31 European countries. We performed a Bayesian meta-analysis of this dataset to test the seed germination response to environmental cues including scarification, stratification, temperature, alternating temperature and light. We also used multivariate ordination to check the relationship between seed traits (germination and morphology) and species ecological preferences, and to compare the seed ecology of mesic meadows with that of other herbaceous plant communities from the same geographic area.

KEY RESULTS

The seed ecology of mesic meadows is characterized by (1) high seed germinability when compared with other herbaceous plant communities; (2) low correspondence between seed traits and species ecological preferences; and (3) a deep phylogenetic separation between the two major families, Poaceae and Fabaceae. Poaceae produce many light seeds that respond to gap-detecting germination cues (alternating temperatures and light); Fabaceae produce fewer heavy seeds, which need scarification to break their physical dormancy.

CONCLUSIONS

High germinability of meadow seeds will reduce their capacity to form persistent seed banks, resulting in dispersal limitations to passive regeneration. For centuries, human activities have shaped the regeneration of meadows, leading to a loss of seed dormancy and decoupling seeds from seasonal cycles, as has been found in many domesticated species. The same anthropic processes that have shaped semi-natural mesic meadows have left them dependent on continued human intervention for their regeneration, highlighting the importance of active restoration via seed supply.

Biochemical and transcriptomic analyses of the symbiotic interaction between Cremastra appendiculata and the mycorrhizal fungus Coprinellus disseminatus

BACKGROUND

Cremastra appendiculata is a rare terrestrial orchid with a high market value as an ornamental and medicinal plant. However, the species depends entirely on fungi for seed germination under natural conditions. In a previous study, we have successfully isolated and identified the mycorrhizal fungus Coprinellus disseminatus which was able to induce the germination of C. appendiculata seeds. We then speculated that C. disseminatus may do so by breaking the testa imposed dormancy of the seeds. In this study, biochemical and transcriptomic analyses were used to characterize the germination of C. appendiculata seeds, collected at different stages of germination, as affected by C. disseminatus.

RESULTS

The lignocellulose in the seeds coat of C. appendiculata was degraded by the mycorrhizal fungus resulting in facilitated absorption of water. The rate of decline in lignin content was 67 and 73% at 6 and 12 days after sowing, respectively. The water content increased from 13 to 90% during symbiosis. A total of 15,382 genes showing significantly different levels of expression (log₂ FPKM≥2.0, Qvalue≤0.05) were successfully identified among all libraries, where the highest number of DEGs was shared between 6 days versus 0 day after symbiotic germination. Gene annotation results suggested that 15 key genes related water-status, such as DHN gene family and Xero 1 were down-regulated. The genes zeaxanthin epoxidase ZEP, 9-cis-epoxycarotenoid dioxygenase NCED3 and β-carotene hydroxylase involved in the biosynthesis of abscisic acid (ABA) were significantly down-regulated in 6 days as compared to 0 day after symbiotic germination.

CONCLUSIONS

This work demonstrates that mycorrhizal fungus C. disseminatus can stimulate C. appendiculata seeds germination through a mechanism of breaking the testa imposed dormancy and inducing water absorption of the embryo.

Stories from the Greenhouse-A Brief on Cotton Seed Germination

Seed germination is the basis for the proliferation of sexual-reproducing plants, efficient crop production, and a successful crop improvement research program. Cotton (Gossypium spp.), the subject of this review, can be often sensitive to germination conditions. The hardness of the cotton seed coat, storage, extreme temperatures, and dormancy are some of the factors that can influence cotton seed germination. Research programs conducting studies on exotic and wild cotton species are especially affected by those hurdles. Here, we briefly review the challenges of cotton seed germination and some of the approaches our cotton breeding program explored throughout the years.

Experimental Warming Hastens Physical Dormancy Break and Germination in Tropical Fabaceae

Climate warming may threaten the germination strategies of many plants that are uniquely adapted to today's climate. For instance, species that employ physical dormancy (PY) - the production of seeds that are impermeable to water until high temperatures break them, consequently synchronizing germination with favorable growing conditions - may find that their seeds germinate during unfavorable or potentially fatal periods if threshold temperatures are reached earlier in the year. To explore this, we subjected the seeds of five species with physical dormancy (from the genera Abrus, Bauhinia, Cassia, Albizia, and Acacia) to "mild" (+2°C) and "extreme" (+4°C) future warming scenarios and documented their germination over 2 years relative to a control treatment. Under current climatic conditions, a proportion of seeds from all five species remained dormant in the soil for 2 years. A mild warming of 2°C had little to no effect on the germination of four of the five study species. Contrastingly, an extreme warming of 4°C dramatically increased germination in all five species within the first year, indicating a reduction in their ability to persist in the soil long-term. Cassia fistula was particularly susceptible to warming, exhibiting a similar increase in germination under both mild and extreme warming relative to control. Our findings suggest that climate warming in the tropics may cause the seeds of species that rely on physical dormancy to stagger the risk of unsuccessful germination across years to leave soil seed banks prematurely - the long-term implications of which remain unknown.

Volatile signature indicates viability of dormant orthodox seeds

All seeds eventually die even under optimal storage conditions. The moment of viability loss is difficult to predict and detect. In order to differentiate between dead and viable dormant orthodox seeds, GC-MS analysis was used to non-invasively evaluate the volatile signature of seeds of Pyrus communis L. and Sorbus aucuparia L. Dormant seeds are capable of extended metabolic depression. However, their low metabolic rate remains largely unquantified, and there are no measurements of metabolites, i.e. volatile organic compounds (VOC) for physiologically dormant seeds during storage. Therefore, to address this issue, seeds were stored at a broad range of moisture content (MC) ranging from 2 to 30% under cryogenic (-196°C), cool (5°C) and elevated (40°C) temperatures. Volatile emission was highly dependent on seed MC and storage temperature and was higher under conditions associated with seed viability loss. However, changes in the emission of volatiles entrapped in seeds and released during 24 h after storage were detected for all conditions, providing insight into the processes occurring in dry dormant seeds. Among the 36 volatiles identified, three (acetaldehyde, ethanol, ethyl acetate) were highly correlated with seed germinability and show potential for the non-invasive screening of viability. Significantly, all three VOC are derived mostly from glycolysis and peroxidation and were detected even under very low moisture and temperature storage conditions. This is the first study to report on VOC accumulation and emission from physiologically dormant seeds and provide a broader view into their viability.

Functional packaging of seeds

The encapsulation of seeds in hard coats and fruit walls (pericarp layers) fulfils protective and dispersal functions in many plant families. In angiosperms, packaging structures possess a remarkable range of different morphologies and functionalities, as illustrated by thermo and hygro-responsive seed pods and appendages, as well as mechanically strong and water-impermeable shells. Key to these different functionalities are characteristic structural arrangements and chemical modifications of the underlying sclerenchymatous tissues. Although many ecological aspects of hard seed encapsulation have been well documented, a detailed understanding of the relationship between tissue structure and function only recently started to emerge, especially in the context of environmentally driven fruit opening and seed dispersal (responsive encapsulations) and the outstanding durability of some seed coats and indehiscent fruits (static encapsulations). In this review, we focus on the tissue properties of these two systems, with particular consideration of water interactions, mechanical resistance, and force generation. Common principles, as well as unique adaptations, are discussed in different plant species. Understanding how plants integrate a broad range of functions and properties for seed protection during storage and dispersal plays a central role for seed conservation, population dynamics, and plant-based material developments.

Gaseous environment modulates volatile emission and viability loss during seed artificial ageing

Modulation of the gaseous environment using oxygen absorbers and/or silica gel shows potential for enhancing seed longevity through trapping toxic volatiles emitted by seeds during artificial ageing. Volatile profiling using non-invasive gas chromatography-mass spectrometry provides insight into the specific processes occurring during seed ageing. Production of alcohols, aldehydes and ketones, derived from processes such as alcoholic fermentation, lipid peroxidation and Maillard reactions, are known to be dependent on storage temperature and relative humidity, but little is known about the potential modulating role of the gaseous environment, which also affects seed lifespan, on volatile production. Seeds of Lolium perenne (Poaceae), Agrostemma githago (Caryophyllaceae) and Pisum sativum (Fabaceae) were aged under normal atmospheric oxygen conditions and in sealed vials containing either oxygen absorbers, oxygen absorbers and silica gel (equilibrated at 60% RH), or silica gel alone. Seeds of A. githago that were aged in the absence of oxygen maintained higher viability and produced fewer volatiles than seeds aged in air. In addition, seeds of A. githago and L. perenne aged in the presence of silica gel were longer lived than those aged without silica, with no effect on seed moisture content or oxygen concentration in the storage containers, but with silica gel acting as a volatile trap. These results indicate that the use of inexpensive oxygen absorbers and silica gel could improve seed longevity in storage for some species and suggests a potential, and previously unidentified, role for silica gel in ultra-dry storage.

Pilfering of western juniper seed caches by scatter-hoarding rodents varies by microsite and canopy type

Scatter-hoarding rodents store seeds throughout their home ranges in superficially buried caches which, unlike seeds larder-hoarded in burrows, are difficult to defend. Cached seeds are often pilfered by other scatter-hoarders and either re-cached, eaten or larder-hoarded. Such seed movements can influence seedling recruitment, because only seeds remaining in caches are likely to germinate. Although the importance of scatter-hoarding rodents in the dispersal of western juniper seeds has recently been revealed, the level of pilfering that occurs after initial burial is unknown. Seed traits, soil moisture, and substrate can influence pilfering processes, but less is known about how pilfering varies among caches placed in open versus canopy microsites, or how cache discovery and removal varies among different canopy-types, tree versus shrub. We compared the removal of artificial caches between open and canopy microsites and between tree and shrub canopies at two sites in northeastern California during late spring and fall. We also used trail cameras at one site to monitor artificial cache removal, identify potential pilferers, and illuminate microsite use by scatter-hoarders. Removal of artificial caches was faster in open microsites at both sites during both seasons, and more caches were removed from shrub than tree canopies. California kangaroo rats were the species observed most on cameras, foraging most often in open microsites, which could explain the observed pilfering patterns. This is the first study to document pilfering of western juniper seeds, providing further evidence of the importance of scatter-hoarding rodent foraging behavior in understanding seedling recruitment processes in juniper woodlands.

Seed dormancy of Cardiospermum halicacabum (Sapindaceae) from three precipitation zones in Sri Lanka

This study investigated seed germination of Cardiospermum halicacabum, a medicinally important invasive species. We compared mass, moisture content (MC), dormancy and dormancy-breaking treatments and imbibition and germination of scarified and non-scarified seeds of C. halicacabum from a low-elevation dry zone (DZ), low-elevation wet zone (WZ1) and mid-elevation wet zone (WZ2) in Sri Lanka to test the hypothesis that the percentage of seeds with water-impermeable seed coats (physical dormancy, PY) decreases with increased precipitation. Seed mass was higher in WZ2 than in DZ and WZ1, while seed MC did not vary among the zones. All scarified DZ, WZ1 and WZ2 and non-scarified DZ and WZ1 seeds imbibed water, but only a few non-scarified WZ2 seeds did so. When DZ and WZ1 seeds were desiccated, MC and percentage imbibition decreased, showing that these seeds have the ability to develop PY. GA₃ promoted germination of embryos excised from fresh DZ and WZ1 seeds and of scarified WZ2 seeds. At maturity, seeds from DZ and WZ1 had only physiological dormancy (PD), while those from WZ2 had combinational dormancy (PY+PD). Thus, our hypothesis was not supported. Since a high percentage of excised embryos developed into normal seedlings; this is a low-cost method to produce C. halicacabum plants for medicinal and ornamental purposes.

Do properties and species of weed seeds affect their consumption by carabid beetles?

Seed predators are an integral part of agroecosystems, where they can reduce the populations of weeds. The preference of predators for seeds and the observed predation rate may be affected by the properties of seeds (e.g. taxonomy, chemical composition, physical defence). In this work, we focused on seed consumption of Taraxacum officinale Web. and Stellaria media (L.) Vill., from France and the Czech Republic, by three species of ground beetle that are seed predators (Coleoptera: Carabidae): Poecilus cupreus (Linnaeus), Pterostichus melanarius (Illiger) and Anchomenus dorsalis (Pontoppidan). The seed species were offered in arenas, simultaneously, under three different experimental manipulations of moisture and seed coat conditions: dry and intact, water-imbibed and intact, and water-imbibed with a damaged seed coat. Seed consumption was checked after 0.5, 1, 2, 24, and 48 hours of exposure. Anchomenus dorsalis largely refused to feed on seeds. Taraxacum officinale seeds with damaged coats were most preferred by the remaining two species of carabids. The consumption by P. cupreus of T. officinale seeds with damaged coats increased from 0.18 % after 0.5 hours to 83.83 % after 48 hours, and by P. melanarius from 13.76 % after 0.5 hours to 76.77 % after 48 hours. Seeds of S. media were consumed less. There was a significant difference in consumption rates due to the country of origin of the seeds, but there were no differences between the carabid sexes. That carabids preferred water-imbibed and damaged seeds may suggest an involvement of olfactory clues in the seed selection process, and/or shorter seed-handling times.

Topological Interlocking and Geometric Stiffening as Complementary Strategies for Strong Plant Shells

Many organisms encapsulate their embryos in hard, protective shells. While birds and reptiles largely rely on mineralized shells, plants often develop highly robust lignocellulosic shells. Despite the abundance of hard plant shells, particularly nutshells, it remains unclear which fundamental properties drive their mechanical stability. This multiscale analysis of six prominent (nut)shells (pine, pistachio, walnut, pecan, hazelnut, and macadamia) reveals geometric and structural strengthening mechanisms on the cellular and macroscopic length scales. The strongest tissues, found in walnut and pistachio, exploit the topological interlocking of 3D-puzzle cells and thereby outperform the fiber-reinforced structure of macadamia under tensile and compressive loading. On the macroscopic scale, strengthening occurs via an increased shell thickness, spherical shape, small size, and a lack of extended sutures. These functional interrelations suggest that simple geometric modifications are a powerful and resource-efficient strategy for plants to enhance the fracture resistance of entire shells and their tissues. Understanding the interplay between structure, geometry, and mechanics in hard plant shells provides new perspectives on the evolutionary diversification of hard seed coats, as well as insights for nutshell-based material applications.

Which Seed Properties Determine the Preferences of Carabid Beetle Seed Predators?

Simple Summary

The carabid beetles are well known for the consumption of weed seeds in arable land, but how they choose the seeds is poorly known. In this work, we try to explain the patterns in preferences of 37 species of carabids based on eight seed properties of 28 species of seeds. Surprisingly, chemical properties of the seeds did not affect the preferences. Instead, preferences were driven mainly by seed structural properties. The importance of particular seed properties was also affected by the degree of predator specialization.

Abstract

Ground beetles are important invertebrate seed predators in temperate agro-ecosystems. However, there is a lack of information regarding which seed properties are important to carabids when they select seeds for consumption. Therefore, seed properties, such as size, shape, morphological defence, and chemical composition, were measured, and in addition to seed taxonomy and ecology, these data were used to explain carabid preferences. Carabid preferences were assessed using a multi-choice experiment with 28 species of weed seeds presented to 37 species of Carabidae. Multiple regression on distance matrices (MRM) was used to determine the importance of particular sets of seed properties for carabids. The analysis was conducted for the full set of carabids (37 species) as well as for subsets of species belonging to the tribes of Harpalini or Zabrini. For the complete set of species, seed dimensions, seed mass, taxonomy, plant strategy, and seed coat properties significantly explained carabid preferences (proportion of explained variance, R² = 0.465). The model for Harpalini fit the data comparably well (R² = 0.477), and seed dimensions, seed mass and seed coat properties were significant. In comparison to that for Harpalini, the model for Zabrini had much lower explanatory power (R² = 0.248), and the properties that significantly affected the preferences were seed dimensions, seed mass, taxonomy, plant strategy, and seed coat properties. This result suggests that the seed traits that carabids respond to may be specific to taxonomic and likely relate to the degree of specialisation for seeds. This study contributes to understanding the mechanisms that determine the preferences of carabid beetles for seeds.

Extending Plant Defense Theory to Seeds

Plant defense theory explores how plants invest in defenses against natural enemies but has focused primarily on the traits expressed by juvenile and mature plants. Here we describe the diverse ways in which seeds are chemically and physically defended. We suggest that through associations with other traits, seeds are likely to exhibit defense syndromes that reflect constraints or trade-offs imposed by selection to attract dispersers, enable effective dispersal, ensure appropriate timing of seed germination, and enhance seedling performance. We draw attention to seed and reproductive traits that are analogous to defense traits in mature plants and describe how the effectiveness of defenses is likely to differ at pre- and postdispersal stages. We also highlight recent insights into the mutualistic and antagonistic interactions between seeds and microbial communities, including fungi and endohyphal bacteria, that can influence seed survival in the soil and subsequent seedling vigor.

Pods as sails but not as boats: dispersal ecology of a habitat-restricted desert milkvetch

PREMISE

Adaptive seed dispersal mechanisms are fundamental to plant fitness, but dispersal advantage is scale-dependent. We tested the hypothesis that informed dispersal in response to an environmental cue enables dispersal by wind on a local scale for Astragalus holmgreniorum, a desert species restricted to swales and wash skirts with overland flow, but prevents longer-distance dispersal by water into unfavorable wash habitats.

METHODS

Pod biomechanics in A. holmgreniorum lead to major shape modifications with changes in moisture content. We performed laboratory experiments to examine the interaction of pod shape with wind and water, and conducted field experiments in A. holmgreniorum habitat evaluating the roles of wind, water, and seed predators on dispersal.

RESULTS

Dry pods exhibit a flattened crescent shape with partial dehiscence that facilitated wind dispersal by ground tumbling and seed scattering in laboratory experiments. Rain simulation experiments showed that even small precipitation events returned wetted pods to their cylindrical shape and opened the dorsal suture, exposing the seeds. In the field experiments, dry pods were moved locally by wind, whereas rain caused pod opening and washing out of seeds in place. Seed predators had minimal effect on pod movement.

CONCLUSIONS

Astragalus holmgreniorum exhibits pod structural remodeling in response to environmental change in a striking and novel demonstration of informed dispersal. Wind-driven movement of dry pods facilitates local seed dispersal, but rain causes pods to open and release seeds, ensuring that they are not transported out of suitable habitats and into active washes where they would be lost from the seed bank.

Intrinsic and extrinsic drivers of intraspecific variation in seed dispersal are diverse and pervasive

There is growing realization that intraspecific variation in seed dispersal can have important ecological and evolutionary consequences. However, we do not have a good understanding of the drivers or causes of intraspecific variation in dispersal, how strong an effect these drivers have, and how widespread they are across dispersal modes. As a first step to developing a better understanding, we present a broad, but not exhaustive, review of what is known about the drivers of intraspecific variation in seed dispersal, and what remains uncertain. We start by decomposing 'drivers of intraspecific variation in seed dispersal' into intrinsic drivers (i.e. variation in traits of individual plants) and extrinsic drivers (i.e. variation in ecological context). For intrinsic traits, we further decompose intraspecific variation into variation among individuals and variation of trait values within individuals. We then review our understanding of the major intrinsic and extrinsic drivers of intraspecific variation in seed dispersal, with an emphasis on variation among individuals. Crop size is the best-supported and best-understood intrinsic driver of variation across dispersal modes; overall, more seeds are dispersed as more seeds are produced, even in cases where per seed dispersal rates decline. Fruit/seed size is the second most widely studied intrinsic driver, and is also relevant to a broad range of seed dispersal modes. Remaining intrinsic drivers are poorly understood, and range from effects that are probably widespread, such as plant height, to drivers that are most likely sporadic, such as fruit or seed colour polymorphism. Primary extrinsic drivers of variation in seed dispersal include local environmental conditions and habitat structure. Finally, we present a selection of outstanding questions as a starting point to advance our understanding of individual variation in seed dispersal.

Scent chemistry is key in the evolutionary transition between insect and mammal pollination in African pineapple lilies

Volatile emissions may play a key role in structuring pollination systems of plants with morphologically unspecialised flowers. Here we test for pollination by small mammals in Eucomis regia and investigate whether its floral scent differs markedly from fly- and wasp-pollinated congeners and attracts mammals. We measured floral traits of E. regia and made comparisons with insect-pollinated congeners. We observed floral visitors and examined fur and faeces of live-trapped mammals for pollen. We determined the contributions of different floral visitors to seed set with selective exclusion and established the breeding system with controlled pollination experiments. Using bioassays, we examined whether mammals are attracted by the floral scent and are effective agents of pollen transfer. Eucomis regia differs from closely related insect-pollinated species mainly in floral scent, with morphology, colour and nectar properties being similar. We found that mice and elephant-shrews pollinate E. regia, which is self-incompatible and reliant on vertebrates for seed production. Mammals are strongly attracted to the overall floral scent, which contains unusual sulphur compounds, including methional (which imparts the distinctive potato-like scent and which was shown to be attractive to small mammals). The results highlight the important role of scent chemistry in shifts between insect and mammal pollination systems.

Dormancy-defense syndromes and tradeoffs between physical and chemical defenses in seeds of pioneer species

Seeds of tropical pioneer trees have chemical and physical characteristics that determine their capacity to persist in the soil seed bank. These traits allow seeds to survive in the soil despite diverse predators and pathogens, and to germinate and recruit even decades after dispersal. Defenses in seedlings and adult plants often are described in terms of tradeoffs between chemical and physical defense, but the interplay of defensive strategies has been evaluated only rarely for seeds. Here we evaluated whether classes of seed defenses were negatively correlated across species (consistent with tradeoffs in defense strategies), or whether groups of traits formed associations across species (consistent with seed defense syndromes). Using 16 of the most common pioneer tree species in a neotropical lowland forest in Panama we investigated relationships among four physical traits (seed fracture resistance, seed coat thickness, seed permeability, and seed mass) and two chemical traits (number of phenolic compounds and phenolic peak area), and their association with seed persistence. In addition, seed toxicity was assessed with bioassays in which we evaluated the activity of seed extracts against representative fungal pathogens and a model invertebrate. We did not find univariate tradeoffs between chemical and physical defenses. Instead, we found that seed permeability - a trait that distinguishes physical dormancy from other dormancy types - was positively associated with chemical defense traits and negatively associated with physical defense traits. Using a linear discriminant analysis and a hierarchical cluster analysis we found evidence to distinguish three distinct seed defense syndromes that correspond directly with seed dormancy classes (i.e., quiescent, physical, and physiological). Our data suggest that short and long-term persistence of seeds can be achieved via two strategies: having permeable seeds that are well defended chemically, corresponding to the physiologically dormant defense syndrome; or having impermeable seeds that are well defended physically, corresponding to the physically dormant defense syndrome. In turn, transient seeds appear to have a lower degree of chemical and physical defenses, corresponding to the quiescent defense syndrome. Overall, we find that seed defense and seed dormancy are linked, suggesting that environmental pressures on seed persistence and for delayed germination can select for trait combinations defining distinct dormancy-defense syndromes.