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Clayton-Cuch D, Yu L, McDougal D, Burbidge CA, Bruning JB, Bradley D, Böttcher C, Bulone V. Biochemical and in silico characterization of glycosyltransferases from red sweet cherry ( Prunus avium L.) reveals their broad specificity toward phenolic substrates. FOOD CHEMISTRY. MOLECULAR SCIENCES 2024; 8:100193. [PMID: 38292011 PMCID: PMC10825616 DOI: 10.1016/j.fochms.2023.100193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 12/20/2023] [Accepted: 12/30/2023] [Indexed: 02/01/2024]
Abstract
Polyphenolic compounds are a class of phytonutrients that play important roles in plants and contribute to human health when incorporated into our diet through fruit consumption. A large proportion occur as glycoconjugates but the enzymes responsible for their glycosylation are poorly characterized. Here, we report the biochemical and structural characterization of two glycosyltransferases from sweet cherry named PaUGT1 and PaUGT2. Both are promiscuous glucosyltransferases active on diverse anthocyanidins and flavonols, as well as phenolic acids in the case of PaUGT1. They also exhibit weaker galactosyltransferase activity. The expression of the gene encoding PaUGT1, the most active of the two proteins, follows anthocyanin accumulation during fruit ripening, suggesting that this enzyme is the primary glycosyltransferase involved in flavonoid glycosylation in sweet cherry. It can potentially be used to synthesize diverse glycoconjugates of flavonoids for integration into bioactive formulations, and for generating new fruit cultivars with enhanced health-promoting properties using breeding methods.
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Affiliation(s)
- Daniel Clayton-Cuch
- Adelaide Glycomics, University of Adelaide, School of Agriculture, Food and Wine, Waite Campus, Adelaide, South Australia 5064, Australia
- CSIRO, Waite Campus, Glen Osmond, South Australia 5064, Australia
| | - Long Yu
- Adelaide Glycomics, University of Adelaide, School of Agriculture, Food and Wine, Waite Campus, Adelaide, South Australia 5064, Australia
| | - Daniel McDougal
- Institute for Photonics and Advanced Sensing (IPAS), School of Biological Sciences, The University of Adelaide, Adelaide, South Australia 5005, Australia
| | | | - John B. Bruning
- Institute for Photonics and Advanced Sensing (IPAS), School of Biological Sciences, The University of Adelaide, Adelaide, South Australia 5005, Australia
| | - David Bradley
- Agilent Technologies Australia Pty Ltd, Mulgrave, Melbourne, Victoria 3171, Australia
| | | | - Vincent Bulone
- Adelaide Glycomics, University of Adelaide, School of Agriculture, Food and Wine, Waite Campus, Adelaide, South Australia 5064, Australia
- Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm 10691, Sweden
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2
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Sharif Y, Zhuang Y, Xie W, Zhang C, Chen K, Deng Y, Chen Y, Fu H, Wang L, Chen X, Zhuang W, Chen H. Molecular Cloning and Functional Identification of a Pericarp- and Testa-Abundant Gene's ( AhN8DT-2) Promoter from Arachis hypogaea. Int J Mol Sci 2024; 25:7671. [PMID: 39062915 PMCID: PMC11276643 DOI: 10.3390/ijms25147671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2024] [Revised: 07/04/2024] [Accepted: 07/06/2024] [Indexed: 07/28/2024] Open
Abstract
Cultivated peanut (Arachis hypogaea L.) is a key oil- and protein-providing legume crop of the world. It is full of nutrients, and its nutrient profile is comparable to that of other nuts. Peanut is a unique plant as it showcases a pegging phenomenon, producing flowers above ground, and after fertilization, the developing peg enters the soil and produces seeds underground. This geocarpic nature of peanut exposes its seeds to soil pathogens. Peanut seeds are protected by an inedible pericarp and testa. The pericarp- and testa-specific promoters can be effectively used to improve the seed defense. We identified a pericarp- and testa-abundant expression gene (AhN8DT-2) from available transcriptome expression data, whose tissue-specific expression was further confirmed by the qRT-PCR. The 1827bp promoter sequence was used to construct the expression vector using the pMDC164 vector for further analysis. Quantitative expression of the GUS gene in transgenic Arabidopsis plants showed its high expression in the pericarp. GUS staining showed a deep blue color in the pericarp and testa. Cryostat sectioning of stained Arabidopsis seeds showed that expression is only limited to seed coat (testa), and staining was not present in cotyledons and embryos. GUS staining was not detected in any other tissues, including seedlings, leaves, stems, and roots, except for some staining in flowers. Under different phytohormones, this promoter did not show an increase in expression level. These results indicated that the AhN8DT-2 promoter drives GUS gene expression in a pericarp- and testa-specific manner. The identified promoter can be utilized to drive disease resistance genes, specifically in the pericarp and testa, enhancing peanut seed defense against soil-borne pathogens. This approach has broader implications for improving the resilience of peanut crops and other legumes, contributing to sustainable agricultural practices and food security.
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Affiliation(s)
- Yasir Sharif
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Yuhui Zhuang
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Wenpin Xie
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
| | - Chong Zhang
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
| | - Kun Chen
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Ye Deng
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
| | - Yuting Chen
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
| | - Huiwen Fu
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Lihui Wang
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Xiangyu Chen
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
- Crops Research Institute, Fujian Academy of Agricultural Science, Fuzhou 350013, China
| | - Weijian Zhuang
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
| | - Hua Chen
- College of Agriculture, Center of Legume Plant Genetics and System Biology, Institute of Oil Crops, Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China; (Y.S.); (Y.Z.); (W.X.); (C.Z.); (K.C.); (Y.D.); (Y.C.); (H.F.); (L.W.); (X.C.)
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Ma X, Yue Q, Miao L, Li S, Tian J, Si W, Zhang L, Yang W, Zhou X, Zhang J, Chen R, Xu Y, Liu X. A novel nucleic acid linker for multi-gene expression enhances plant and animal synthetic biology. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 118:1864-1871. [PMID: 38470090 DOI: 10.1111/tpj.16714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 01/28/2024] [Accepted: 02/20/2024] [Indexed: 03/13/2024]
Abstract
The production of compact vectors for gene stacking is hindered by a lack of effective linkers. Here, we report that a 26-nt nucleic acid linker, NAL1, from the fungus Glarea lozoyensis and its truncated derivatives could connect two genes as a bicistron, enabling independent translation in a maize protoplast transient expression system and human 293 T cells. The optimized 9-nt NAL10 linker was then used to connect four genes driven by a bidirectional promoter; this combination was successfully used to reconstruct the astaxanthin biosynthesis pathway in transgenic maize. The short and efficient nucleic acid linker NAL10 can be widely used in multi-gene expression and synthetic biology in animals and plants.
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Affiliation(s)
- Xuhui Ma
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Qun Yue
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Liqing Miao
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Suzhen Li
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Jian Tian
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Wei Si
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Liwen Zhang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Wenzhu Yang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Xiaojin Zhou
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Junmin Zhang
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Rumei Chen
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Yuquan Xu
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Xiaoqing Liu
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
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4
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Spatola Rossi T, Fricker M, Kriechbaumer V. Gene Stacking and Stoichiometric Expression of ER-Targeted Constructs Using "2A" Self-Cleaving Peptides. Methods Mol Biol 2024; 2772:337-351. [PMID: 38411827 DOI: 10.1007/978-1-0716-3710-4_26] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/28/2024]
Abstract
Simultaneous stoichiometric expression of multiple genes plays a major part in modern research and biotechnology. Traditional methods for incorporating multiple transgenes (or "gene stacking") have drawbacks such as long time frames, uneven gene expression, gene silencing, and segregation derived from the use of multiple promoters. 2A self-cleaving peptides have emerged over the last two decades as a functional gene stacking method and have been used in plants for the co-expression of multiple genes under a single promoter. Here we describe design features of multicistronic polyproteins using 2A peptides for co-expression in plant cells and targeting to the endoplasmic reticulum (ER). We designed up to quad-cistronic vectors that could target proteins in tandem to the ER. We also exemplify the incorporation of self-excising intein domains within 2A polypeptides, to remove residue additions. These features could aid in the design of stoichiometric protein co-expression strategies in plants in combination with targeting to different subcellular compartments.
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Affiliation(s)
- Tatiana Spatola Rossi
- Endomembrane Structure and Function Research Group, Department of Biological and Medical Sciences, Oxford Brookes University, Oxford, UK
| | - Mark Fricker
- Department of Biology, University of Oxford, Oxford, UK
| | - Verena Kriechbaumer
- Endomembrane Structure and Function Research Group, Department of Biological and Medical Sciences, Oxford Brookes University, Oxford, UK.
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5
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Bibik JD, Hamberger B. Plant Engineering to Enable Platforms for Sustainable Bioproduction of Terpenoids. Methods Mol Biol 2024; 2760:3-20. [PMID: 38468079 DOI: 10.1007/978-1-0716-3658-9_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/13/2024]
Abstract
Terpenoids represent the most diverse class of natural products, with a broad spectrum of industrial relevance including applications in green solvents, flavors and fragrances, nutraceuticals, colorants, and therapeutics. They are typically challenging to extract from their natural sources, where they occur in small amounts and mixtures of related but unwanted byproducts. Formal chemical synthesis, where established, is reliant on petrochemistry. Hence, there is great interest in developing sustainable solutions to assemble biosynthetic pathways in engineered host organisms. Metabolic engineering for chemical production has largely focused on microbial hosts, yet plants offer a sustainable production platform. In addition to containing the precursor pathways that generate the terpenoid building blocks as well as the cell structures and compartments required, or tractable localization for the enzymes involved, plants may provide a low input system to produce these chemicals using carbon dioxide and sunlight only. There have been significant recent advancements in the discovery of pathways to terpenoids of interest as well as strategies to boost yields in host plants. While part of the phytochemical field is focusing on the discovery of biosynthetic pathways, this review will focus on advancements using the pathway toolbox and toward engineering plants for the production of terpenoids. We will highlight strategies currently used to produce target products, optimization of known pathways to improve yields, compartmentalization of pathways within cells, and genetic tools developed to facilitate complex engineering of biosynthetic pathways. These advancements in Synthetic Biology are bringing engineered plant systems closer to commercially relevant hosts for the bioproduction of terpenoids.
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Affiliation(s)
- Jacob D Bibik
- Department of Biochemistry, Michigan State University, East Lansing, MI, USA
- MelaTech, LLC, Baltimore, MD, USA
| | - Björn Hamberger
- Department of Biochemistry, Michigan State University, East Lansing, MI, USA.
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6
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Beesley A, Beyer SF, Wanders V, Levecque S, Bredenbruch S, Habash SS, Schleker ASS, Gätgens J, Oldiges M, Schultheiss H, Conrath U, Langenbach CJG. Engineered coumarin accumulation reduces mycotoxin-induced oxidative stress and disease susceptibility. PLANT BIOTECHNOLOGY JOURNAL 2023; 21:2490-2506. [PMID: 37578146 PMCID: PMC10651151 DOI: 10.1111/pbi.14144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 06/23/2023] [Accepted: 07/23/2023] [Indexed: 08/15/2023]
Abstract
Coumarins can fight pathogens and are thus promising for crop protection. Their biosynthesis, however, has not yet been engineered in crops. We tailored the constitutive accumulation of coumarins in transgenic Nicotiana benthamiana, Glycine max and Arabidopsis thaliana plants, as well as in Nicotiana tabacum BY-2 suspension cells. We did so by overexpressing A. thaliana feruloyl-CoA 6-hydroxylase 1 (AtF6'H1), encoding the key enzyme of scopoletin biosynthesis. Besides scopoletin and its glucoside scopolin, esculin at low level was the only other coumarin detected in transgenic cells. Mechanical damage of scopolin-accumulating tissue led to a swift release of scopoletin, presumably from the scopolin pool. High scopolin levels in A. thaliana roots coincided with reduced susceptibility to the root-parasitic nematode Heterodera schachtii. In addition, transgenic soybean plants were more tolerant to the soil-borne pathogenic fungus Fusarium virguliforme. Because mycotoxin-induced accumulation of reactive oxygen species and cell death were reduced in the AtF6'H1-overexpressors, the weaker sensitivity to F. virguliforme may be caused by attenuated oxidative damage of coumarin-hyperaccumulating cells. Together, engineered coumarin accumulation is promising for enhanced disease resilience of crops.
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Affiliation(s)
| | - Sebastian F. Beyer
- Department of Plant PhysiologyRWTH Aachen UniversityAachenGermany
- Present address:
BASF SE, Agricultural CenterLimburgerhofGermany
| | - Verena Wanders
- Department of Plant PhysiologyRWTH Aachen UniversityAachenGermany
| | - Sophie Levecque
- Department of Plant PhysiologyRWTH Aachen UniversityAachenGermany
| | | | - Samer S. Habash
- Department of Molecular PhytomedicineUniversity of BonnBonnGermany
- Present address:
BASF Vegetable SeedsNunhemNetherlands
| | | | - Jochem Gätgens
- Department of Bioprocesses and BioanalyticsResearch Center Jülich GmbHJülichGermany
| | - Marco Oldiges
- Department of Bioprocesses and BioanalyticsResearch Center Jülich GmbHJülichGermany
| | | | - Uwe Conrath
- Department of Plant PhysiologyRWTH Aachen UniversityAachenGermany
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Jiang L, Gao Y, Han L, Zhang W, Fan P. Designing plant flavonoids: harnessing transcriptional regulation and enzyme variation to enhance yield and diversity. FRONTIERS IN PLANT SCIENCE 2023; 14:1220062. [PMID: 37575923 PMCID: PMC10420081 DOI: 10.3389/fpls.2023.1220062] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 07/05/2023] [Indexed: 08/15/2023]
Abstract
Plant synthetic biology has emerged as a powerful and promising approach to enhance the production of value-added metabolites in plants. Flavonoids, a class of plant secondary metabolites, offer numerous health benefits and have attracted attention for their potential use in plant-based products. However, achieving high yields of specific flavonoids remains challenging due to the complex and diverse metabolic pathways involved in their biosynthesis. In recent years, synthetic biology approaches leveraging transcription factors and enzyme diversity have demonstrated promise in enhancing flavonoid yields and expanding their production repertoire. This review delves into the latest research progress in flavonoid metabolic engineering, encompassing the identification and manipulation of transcription factors and enzymes involved in flavonoid biosynthesis, as well as the deployment of synthetic biology tools for designing metabolic pathways. This review underscores the importance of employing carefully-selected transcription factors to boost plant flavonoid production and harnessing enzyme promiscuity to broaden flavonoid diversity or streamline the biosynthetic steps required for effective metabolic engineering. By harnessing the power of synthetic biology and a deeper understanding of flavonoid biosynthesis, future researchers can potentially transform the landscape of plant-based product development across the food and beverage, pharmaceutical, and cosmetic industries, ultimately benefiting consumers worldwide.
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Affiliation(s)
- Lina Jiang
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou, China
| | - Yifei Gao
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou, China
| | - Leiqin Han
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou, China
| | - Wenxuan Zhang
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou, China
| | - Pengxiang Fan
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou, China
- Key Laboratory of Horticultural Plants Growth and Development, Agricultural Ministry of China, Hangzhou, China
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Wang D, Zhong Y, Feng B, Qi X, Yan T, Liu J, Guo S, Wang Y, Liu Z, Cheng D, Zhang Y, Shi Y, Zhang S, Pan R, Liu C, Chen S. The RUBY reporter enables efficient haploid identification in maize and tomato. PLANT BIOTECHNOLOGY JOURNAL 2023. [PMID: 37195892 PMCID: PMC10363758 DOI: 10.1111/pbi.14071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Revised: 04/24/2023] [Accepted: 04/26/2023] [Indexed: 05/19/2023]
Abstract
In vivo haploid induction has been extended from maize to monocotyledonous plants like rice, wheat, millet and dicotyledonous plants such as tomato, rapeseed, tobacco and cabbage. Accurate identification of haploids is a crucial step of doubled haploid technology, where a useful identification marker is very pivotal. R1-nj is an extensively used visual marker for haploid identification in maize. RFP and eGFP have been shown to be feasible in identifying haploid. However, these methods are either limited to specific species, or require specific equipment. It still lacks an efficient visual marker that is practical across different crop species. In this study, we introduced the RUBY reporter, a betalain biosynthesis system, into maize and tomato haploid inducers as a new marker for haploid identification. Results showed that expression of RUBY could result in deep betalain pigmentation in maize embryos as early as 10 days after pollination, and enabled 100% accuracy of immature haploid embryo identification. Further investigation in tomato revealed that the new marker led to deep red pigmentation in radicles and haploids can be identified easily and accurately. The results demonstrated that the RUBY reporter is a background-independent and efficient marker for haploid identification and would be promising in doubled haploid breeding across different crop species.
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Affiliation(s)
- Dong Wang
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Yu Zhong
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Bin Feng
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Xiaolong Qi
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Tongzheng Yan
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Jinchu Liu
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Shuwei Guo
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Yuwen Wang
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Zongkai Liu
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Dehe Cheng
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Yuling Zhang
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Yunlu Shi
- Center for Crop Functional Genomics and Molecular Breeding, China Agricultural University, Beijing, China
| | - Shuaisong Zhang
- Center for Crop Functional Genomics and Molecular Breeding, China Agricultural University, Beijing, China
| | - RuXue Pan
- Center for Crop Functional Genomics and Molecular Breeding, China Agricultural University, Beijing, China
| | - Chenxu Liu
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
- Hainan Yazhou Bay Seed Laboratory, Sanya, China
| | - Shaojiang Chen
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
- Hainan Yazhou Bay Seed Laboratory, Sanya, China
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9
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Xue YF, Fu C, Chai CY, Liao FF, Chen BJ, Wei SZ, Wang R, Gao H, Fan TT, Chai YR. Engineering the Staple Oil Crop Brassica napus Enriched with α-Linolenic Acid Using the Perilla FAD2- FAD3 Fusion Gene. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:7324-7333. [PMID: 37130169 DOI: 10.1021/acs.jafc.2c09026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Modern people generally suffer from α-linolenic acid (ALA) deficiency, since most staple food oils are low in ALA content. Thus, the enhancement of ALA in staple oil crops is of importance. In this study, the FAD2 and FAD3 coding regions from the ALA-king species Perilla frutescens were fused using a newly designed double linker LP4-2A, driven by a seed-specific promoter PNAP, and engineered into a rapeseed elite cultivar ZS10 with canola quality background. The mean ALA content in the seed oil of PNAP:PfFAD2-PfFAD3 (N23) T5 lines was 3.34-fold that of the control (32.08 vs 9.59%), with the best line being up to 37.47%. There are no significant side effects of the engineered constructs on the background traits including oil content. In fatty acid biosynthesis pathways, the expression levels of structural genes as well as regulatory genes were significantly upregulated in N23 lines. On the other hand, the expression levels of genes encoding the positive regulators of flavonoid-proanthocyanidin biosynthesis but negative regulators of oil accumulation were significantly downregulated. Surprisingly, the ALA level in PfFAD2-PfFAD3 transgenic rapeseed lines driven by the constitutive promoter PD35S was not increased or even showed a slight decrease due to the lower level of foreign gene expression and downregulation of the endogenous orthologous genes BnFAD2 and BnFAD3.
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Affiliation(s)
- Yu-Fei Xue
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
| | - Chun Fu
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
| | - Cheng-Yan Chai
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
| | - Fei-Fei Liao
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
| | - Bao-Jun Chen
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
| | - Song-Zhen Wei
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
| | - Rui Wang
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
| | - Huan Gao
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
| | - Teng-Teng Fan
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
| | - You-Rong Chai
- Integrative Science Center of Germplasm Creation in Western China (CHONGQING) Science City and Southwest University, Chongqing Key Laboratory of Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China
- Engineering Research Center of South Upland Agriculture of Ministry of Education, Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China
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10
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Heterologous mogrosides biosynthesis in cucumber and tomato by genetic manipulation. Commun Biol 2023; 6:191. [PMID: 36805532 PMCID: PMC9938114 DOI: 10.1038/s42003-023-04553-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 02/03/2023] [Indexed: 02/19/2023] Open
Abstract
Mogrosides are widely used as high-value natural zero-calorie sweeteners that exhibit an array of biological activities and allow for vegetable flavour breeding by modern molecular biotechnology. In this study, we developed an In-fusion based gene stacking strategy for transgene stacking and a multi-gene vector harbouring 6 mogrosides biosynthesis genes and transformed it into Cucumis sativus and Lycopersicon esculentum. Here we show that transgenic cucumber can produce mogroside V and siamenoside I at 587 ng/g FW and 113 ng/g FW, respectively, and cultivated transgenic tomato with mogroside III. This study provides a strategy for vegetable flavour improvement, paving the way for heterologous biosynthesis of mogrosides.
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11
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Chen C, Zhang Y, Fu X, Chen C, Wu S, Zhang C, Zhang H, Chang Y, Chen S, Zhao J, Liu C, Wang Y. Influential factors and transcriptome analyses of immature diploid embryo anthocyanin accumulation in maize. BMC PLANT BIOLOGY 2022; 22:609. [PMID: 36564721 PMCID: PMC9789580 DOI: 10.1186/s12870-022-03971-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Accepted: 11/30/2022] [Indexed: 05/29/2023]
Abstract
BACKGROUND Anthocyanins are widely applied as a marker for haploid identification after haploid induction in maize. However, the factors affecting anthocyanin biosynthesis in immature embryos and the genes regulating this process remain unclear. RESULTS In this study, we analyzed the influence of genetic background of the male and female parents, embryo age and light exposure on anthocyanin accumulation in embryos. The results showed that light exposure was the most crucial factor enhancing the pigmentation of immature embryos. The identification accuracy of haploid embryos reached 96.4% after light exposure, but was only 11.0% following dark treatment. The total anthocyanin content was 7-fold higher in immature embryos cultured for 24 h under light conditions compared to embryos cultured in the dark. Transcriptome analysis revealed that the differentially expressed genes between immature embryos cultured for 24 h in dark and light chambers were significantly enriched in the pathways of flavonoid, flavone, flavonol and anthocyanin biosynthesis. Among the genes involved in anthocyanin biosynthesis, five up-regulated genes were identified: F3H, DFR, ANS, F3'H and the MYB transcription factor-encoding gene C1. The expression patterns of 14 selected genes were confirmed using quantitative reverse transcription-polymerase chain reaction. CONCLUSION Light is the most important factor facilitating anthocyanin accumulation in immature embryos. After 24 h of exposure to light, the expression levels of the structural genes F3H, DFR, ANS, F3'H and transcription factor gene C1 were significantly up-regulated. This study provides new insight into the factors and key genes regulating anthocyanin biosynthesis in immature embryos, and supports improved efficiency of immature haploid embryo selection during doubled haploid breeding of maize.
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Affiliation(s)
- Chen Chen
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Yuling Zhang
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, Sanya Research Institute, China Agricultural University, Beijing, 100193, China
| | - Xiuyi Fu
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Chuanyong Chen
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Shanshan Wu
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Chunyuan Zhang
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Huasheng Zhang
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Yiyao Chang
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, Sanya Research Institute, China Agricultural University, Beijing, 100193, China
| | - Shaojiang Chen
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, Sanya Research Institute, China Agricultural University, Beijing, 100193, China
| | - Jiuran Zhao
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.
| | - Chenxu Liu
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, Sanya Research Institute, China Agricultural University, Beijing, 100193, China.
| | - Yuandong Wang
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.
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12
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Liu Z, Liu H, Zheng L, Xu F, Wu Y, Pu L, Zhang G. Enolase2 regulates seed fatty acid accumulation via mediating carbon partitioning in Arabidopsis thaliana. PHYSIOLOGIA PLANTARUM 2022; 174:e13797. [PMID: 36251672 DOI: 10.1111/ppl.13797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 09/21/2022] [Accepted: 10/10/2022] [Indexed: 06/16/2023]
Abstract
In many higher plants, fatty acid (FA) biosynthesis is coordinately regulated at multiple levels by intricate regulatory networks. However, the factors and their regulatory mechanisms underlying seed oil accumulation are still limited. Here, we identified that loss of glycolytic metalloenzyme enolase2 (AtENO2) activity increased the contents of total FAs and salicylic acid (SA) but reduced the accumulation of flavonoids and mucilage by regulating the expression of key genes involved in their biosynthesis pathway in Arabidopsis thaliana seeds. AtENO2 physically interacts with the transcription factor AtTGA5, which may participate in the regulation of SA levels. Non-targeted metabolomics analysis of eno2- and WT also showed that the levels of three flavonoids, quercetin-3-galactoside, quercitrin, and epicatechin, were significantly decreased in eno2- , and the flavonoid biosynthesis pathway was also enriched in the KEGG analysis. Meanwhile, the mutation of AtENO2 delayed silique ripening, thereby prolonging silique photosynthesis time, allowing siliques to generate more photosynthesis products for FA biosynthesis. These results reveal a molecular mechanism by AtENO2 to regulate seed oil accumulation in A. thaliana, providing potential targets for improving crop seed oil quality.
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Affiliation(s)
- Zijin Liu
- Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing, China
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi, China
| | - Huimin Liu
- Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing, China
| | - Lamei Zheng
- Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing, China
| | - Fan Xu
- Biotechnology Research Institute, Chinese Academy of Agriculture Sciences, Beijing, China
| | - Yu Wu
- Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing, China
| | - Li Pu
- Biotechnology Research Institute, Chinese Academy of Agriculture Sciences, Beijing, China
| | - Genfa Zhang
- Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing, China
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13
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Liao J, Liu T, Xie L, Mo C, Huang X, Cui S, Jia X, Lan F, Luo Z, Ma X. Plant Metabolic Engineering by Multigene Stacking: Synthesis of Diverse Mogrosides. Int J Mol Sci 2022; 23:ijms231810422. [PMID: 36142335 PMCID: PMC9499096 DOI: 10.3390/ijms231810422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Revised: 08/29/2022] [Accepted: 09/05/2022] [Indexed: 11/16/2022] Open
Abstract
Mogrosides are a group of health-promoting natural products that extracted from Siraitia grosvenorii fruit (Luo-han-guo or monk fruit), which exhibited a promising practical application in natural sweeteners and pharmaceutical development. However, the production of mogrosides is inadequate to meet the need worldwide, and uneconomical synthetic chemistry methods are not generally recommended for structural complexity. To address this issue, an in-fusion based gene stacking strategy (IGS) for multigene stacking has been developed to assemble 6 mogrosides synthase genes in pCAMBIA1300. Metabolic engineering of Nicotiana benthamiana and Arabidopsis thaliana to produce mogrosides from 2,3-oxidosqualene was carried out. Moreover, a validated HPLC-MS/MS method was used for the quantitative analysis of mogrosides in transgenic plants. Herein, engineered Arabidopsis thaliana produced siamenoside I ranging from 29.65 to 1036.96 ng/g FW, and the content of mogroside III at 202.75 ng/g FW, respectively. The production of mogroside III was from 148.30 to 252.73 ng/g FW, and mogroside II-E with concentration between 339.27 and 5663.55 ng/g FW in the engineered tobacco, respectively. This study provides information potentially applicable to develop a powerful and green toolkit for the production of mogrosides.
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Affiliation(s)
- Jingjing Liao
- The Artemisinin Research Center, Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China
| | - Tingyao Liu
- College of Horticulture, Shenyang Agricultural University, Shenyang 110866, China
| | - Lei Xie
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing 100193, China
| | - Changming Mo
- Guangxi Crop Genetic Improvement and Biotechnology Lab, Guangxi Academy of Agricultural Sciences, Nanning 530007, China
| | - Xiyang Huang
- Guangxi Key Laboratory of Plant Functional Phytochemicals and Sustainable Utilization, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of Sciences, Guilin 541006, China
| | - Shengrong Cui
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing 100193, China
| | - Xunli Jia
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing 100193, China
| | - Fusheng Lan
- Guilin GFS Monk Fruit Corp, Guilin 541006, China
| | - Zuliang Luo
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing 100193, China
- Correspondence: (Z.L.); (X.M.); Tel.: +86-(010)-57833155 (X.M.)
| | - Xiaojun Ma
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing 100193, China
- Correspondence: (Z.L.); (X.M.); Tel.: +86-(010)-57833155 (X.M.)
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14
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Chen C, Liu X, Li S, Liu C, Zhang Y, Luo L, Miao L, Yang W, Xiao Z, Zhong Y, Li J, Chen R, Chen S. Co-expression of transcription factors ZmC1 and ZmR2 establishes an efficient and accurate haploid embryo identification system in maize. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 111:1296-1307. [PMID: 35793378 DOI: 10.1111/tpj.15888] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 06/22/2022] [Accepted: 06/27/2022] [Indexed: 06/15/2023]
Abstract
Because of their high efficiency during chromosome doubling, immature haploid maize (Zea mays L.) embryos are useful for doubled haploid production. The R1-nj marker is commonly used in doubled haploid breeding and has improved the efficiency of haploid identification. However, its effectiveness is limited by genetic background and environmental factors. We addressed this technical challenge by developing an efficient and accurate haploid embryo identification marker through co-expression of two transcription factor genes (ZmC1 and ZmR2) driven by the embryo-aleurone-specific bidirectional promoter PZmBD1 ; these factors can activate anthocyanin biosynthesis in the embryo and aleurone layer during early seed development. We developed a new haploid inducer, Maize Anthocyanin Gene InduCer 1 (MAGIC1), by introducing the transgenes into the haploid inducer line CAU6. MAGIC1 could identify haploids at 12 days after pollination, which is nine days earlier than CAU6. Importantly, MAGIC1 increased haploid identification accuracy to 99.1%, compared with 88.3% for CAU6. In addition, MAGIC1 could effectively overcome the inhibition of anthocyanin synthesis in some germplasms. Furthermore, an upgraded anthocyanin marker was developed from ZmC1 and ZmR2 to generate MAGIC2, which could identify haploids from diploids due to differential anthocyanin accumulation in immature embryos, coleoptiles, sheaths, roots, leaves, and dry seeds. This haploid identification system is more efficient and accurate than the conventional R1-nj-based method, and it simplifies the haploid identification process. Therefore, this system provides technical support for large-scale doubled haploid line production.
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Affiliation(s)
- Chen Chen
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
- Maize Research Institute, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China
| | - Xiaoqing Liu
- Crop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Suzhen Li
- Crop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Chenxu Liu
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
| | - Yuling Zhang
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
| | - Lili Luo
- Crop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Liqing Miao
- Crop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Wenzhu Yang
- Crop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Zijian Xiao
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
| | - Yu Zhong
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
| | - Jiansheng Li
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
| | - Rumei Chen
- Crop Functional Genome Research Center, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Shaojiang Chen
- National Maize Improvement Center of China, College of Agronomy and Biotechnology, China Agricultural University, Beijing, 100193, China
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15
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Heterologous Biosynthesis of Health-Promoting Baicalein in Lycopersicon esculentum. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27103086. [PMID: 35630564 PMCID: PMC9146059 DOI: 10.3390/molecules27103086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/23/2022] [Revised: 05/09/2022] [Accepted: 05/09/2022] [Indexed: 11/16/2022]
Abstract
Baicalein is a valuable flavonoid isolated from the medicinal plant Scutellaria baicalensis Georgi, which exhibits intensive biological activities, such as anticancer and antiviral activities. However, its production is limited in the root with low yield. In this study, In-Fusion and 2A peptide linker were developed to assemble SbCLL-7, SbCHI, SbCHS-2, SbFNSII-2 and SbCYP82D1.1 genes driven by the AtPD7, CaMV 35S and AtUBQ10 promoters with HSP, E9 and NOS terminators, and were used to engineer baicalein biosynthesis in transgenic tomato plants. The genetically modified tomato plants with this construct synthesized baicalein, ranging from 150 ng/g to 558 ng/g FW (fresh weight). Baicalein-fortified tomatoes have the potential to be health-promoting fresh vegetables and provide an alternative source of baicalein production, with great prospects for market application.
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16
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Dwivedi SL, Mattoo AK, Garg M, Dutt S, Singh B, Ortiz R. Developing Germplasm and Promoting Consumption of Anthocyanin-Rich Grains for Health Benefits. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2022.867897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Malnutrition, unhealthy diets, and lifestyle changes are the major risk factors for overweight and obesity-linked chronic diseases in humans adversely impact achieving sustainable development goals. Colored grains are a source of anthocyanins, a group of flavonoids, that contribute positively to human health. This review focuses on genetic variation harnessed through breeding and biotechnology tools for developing anthocyanin-rich grain crops. Agronomic practices, genotype × environment interactions, different stresses, seed development and seed maturity are factors that impact the content and composition of anthocyanins. Significant progress has been made in characterizing genes associated with anthocyanin biosynthesis in cereal and other crops. Breeding has led to the development and release of grain anthocyanin-rich crop cultivars in Europe, America and in some countries in Asia. Notably, genetic engineering utilizing specific transcription factors and gene editing has led to the development of anthocyanin-rich genetic variants without any significant yield penalty. A variety of food products derived from colored grains or flours are now available in grocery stores and supermarkets worldwide. The public perception about anthocyanin-rich food is positive, but availability, affordability, and willingness to pay a higher price than before limit consumption. Together with other seed nutrition traits in breeding programs the inclusion of anthocyanins can ensure the development of cultivars that meet nutrition needs of humans, especially in the developing world.
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17
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Sharif Y, Chen H, Deng Y, Ali N, Khan SA, Zhang C, Xie W, Chen K, Cai T, Yang Q, Zhuang Y, Raza A, Zhuang W. Cloning and Functional Characterization of a Pericarp Abundant Expression Promoter (AhGLP17-1P) From Peanut (Arachis hypogaea L.). Front Genet 2022; 12:821281. [PMID: 35126474 PMCID: PMC8811503 DOI: 10.3389/fgene.2021.821281] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 12/31/2021] [Indexed: 12/11/2022] Open
Abstract
Peanut (Arachis hypogaea L.) is an important oil and food legume crop grown in tropical and subtropical areas of the world. As a geocarpic crop, it is affected by many soil-borne diseases and pathogens. The pericarp, an inedible part of the seed, acts as the first layer of defense against biotic and abiotic stresses. Pericarp promoters could drive the defense-related genes specific expression in pericarp for the defense application. Here, we identified a pericarp-abundant promoter (AhGLP17-1P) through microarray and transcriptome analysis. Besides the core promoter elements, several other important cis-elements were identified using online promoter analysis tools. Semiquantitative and qRT-PCR analyses validated that the AhGLP17-1 gene was specifically expressed only in the pericarp, and no expression was detected in leaves, stem, roots, flowers, gynophore/peg, testa, and embryo in peanut. Transgenic Arabidopsis plants showed strong GUS expression in siliques, while GUS staining was almost absent in remaining tissues, including roots, seedlings, leaf, stem, flowers, cotyledons, embryo, and seed coat confirmed its peanut expressions. Quantitative expression of the GUS gene also supported the GUS staining results. The results strongly suggest that this promoter can drive foreign genes’ expression in a pericarp-abundant manner. This is the first study on the functional characterization of the pericarp-abundant promoters in peanut. The results could provide practical significance to improve the resistance of peanut, and other crops for seed protection uses.
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Affiliation(s)
- Yasir Sharif
- College of Plant Protection, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Hua Chen
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Ye Deng
- College of Plant Protection, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Niaz Ali
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Shahid Ali Khan
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Chong Zhang
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Wenping Xie
- College of Plant Protection, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Kun Chen
- College of Plant Protection, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Tiecheng Cai
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Qiang Yang
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Yuhui Zhuang
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Ali Raza
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Weijian Zhuang
- College of Plant Protection, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Fujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- Center of Legume Crop Genetics and Systems Biology, College of Agriculture, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
- *Correspondence: Weijian Zhuang,
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18
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Mbinda W, Mukami A. A Review of Recent Advances and Future Directions in the Management of Salinity Stress in Finger Millet. FRONTIERS IN PLANT SCIENCE 2021; 12:734798. [PMID: 34603359 PMCID: PMC8481900 DOI: 10.3389/fpls.2021.734798] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 08/16/2021] [Indexed: 06/13/2023]
Abstract
Salinity stress is a major environmental impediment affecting the growth and production of crops. Finger millet is an important cereal grown in many arid and semi-arid areas of the world characterized by erratic rainfall and scarcity of good-quality water. Finger millet salinity stress is caused by the accumulation of soluble salts due to irrigation without a proper drainage system, coupled with the underlying rocks having a high salt content, which leads to the salinization of arable land. This problem is projected to be exacerbated by climate change. The use of new and efficient strategies that provide stable salinity tolerance across a wide range of environments can guarantee sustainable production of finger millet in the future. In this review, we analyze the strategies that have been used for salinity stress management in finger millet production and discuss potential future directions toward the development of salt-tolerant finger millet varieties. This review also describes how advanced biotechnological tools are being used to develop salt-tolerant plants. The biotechnological techniques discussed in this review are simple to implement, have design flexibility, low cost, and highly efficient. This information provides insights into enhancing finger millet salinity tolerance and improving production.
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Affiliation(s)
- Wilton Mbinda
- Department of Biochemistry and Biotechnology, Pwani University, Kilifi, Kenya
- Pwani University Biosciences Research Centre (PUBReC), Pwani University, Kilifi, Kenya
| | - Asunta Mukami
- Department of Life Sciences, South Eastern Kenya University, Kitui, Kenya
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19
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Liu X, Ma X, Wang H, Li S, Yang W, Nugroho RD, Luo L, Zhou X, Tang C, Fan Y, Zhao Q, Zhang J, Chen R. Metabolic engineering of astaxanthin-rich maize and its use in the production of biofortified eggs. PLANT BIOTECHNOLOGY JOURNAL 2021; 19:1812-1823. [PMID: 33780119 PMCID: PMC8428828 DOI: 10.1111/pbi.13593] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Revised: 03/15/2021] [Accepted: 03/18/2021] [Indexed: 06/12/2023]
Abstract
Production of the high-value carotenoid astaxanthin, which is widely used in food and feed due to its strong antioxidant activity and colour, is less efficient in cereals than in model plants. Here, we report a new strategy for expressing β-carotene ketolase and hydroxylase genes from algae, yeasts and flowering plants in the whole seed using a seed-specific bidirectional promoter. Engineered maize events were backcrossed to inbred maize lines with yellow endosperm to generate progenies that accumulate astaxanthin from 47.76 to 111.82 mg/kg DW in seeds, and the maximum level is approximately sixfold higher than those in previous reports (16.2-16.8 mg/kg DW) in cereals. A feeding trial with laying hens indicated that they could take up astaxanthin from the maize and accumulate it in egg yolks (12.10-14.15 mg/kg) without affecting egg production and quality, as observed using astaxanthin from Haematococcus pluvialis. Storage stability evaluation analysis showed that the optimal conditions for long-term storage of astaxanthin-rich maize are at 4 °C in the dark. This study shows that co-expressing of functional genes driven by seed-specific bidirectional promoter could dramatically boost astaxanthin biosynthesis in every parts of kernel including embryo, aleurone layer and starch endosperm other than previous reports in the starch endosperm only. And the staple crop maize could serve as a cost-effective plant factory for reliably producing astaxanthin.
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Affiliation(s)
- Xiaoqing Liu
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Xuhui Ma
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Hao Wang
- State Key Laboratory of Animal NutritionInstitute of Animal SciencesChinese Academy of Agricultural SciencesBeijingChina
| | - Suzhen Li
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Wenzhu Yang
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Ramdhan Dwi Nugroho
- State Key Laboratory of Animal NutritionInstitute of Animal SciencesChinese Academy of Agricultural SciencesBeijingChina
| | - Lili Luo
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Xiaojin Zhou
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Chaohua Tang
- State Key Laboratory of Animal NutritionInstitute of Animal SciencesChinese Academy of Agricultural SciencesBeijingChina
| | - Yunliu Fan
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
| | - Qingyu Zhao
- State Key Laboratory of Animal NutritionInstitute of Animal SciencesChinese Academy of Agricultural SciencesBeijingChina
| | - Junmin Zhang
- State Key Laboratory of Animal NutritionInstitute of Animal SciencesChinese Academy of Agricultural SciencesBeijingChina
| | - Rumei Chen
- Crop Functional Genome Research CenterBiotechnology Research InstituteChinese Academy of Agricultural SciencesBeijingChina
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20
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Jeong YS, Ku HK, Jung YJ, Kim JK, Lee KB, Kim JK, Lim SH, Lee D, Ha SH. 2A-linked bi-, tri-, and quad-cistrons for the stepwise biosynthesis of β-carotene, zeaxanthin, and ketocarotenoids in rice endosperm. Metab Eng Commun 2021; 12:e00166. [PMID: 33665118 PMCID: PMC7903129 DOI: 10.1016/j.mec.2021.e00166] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 01/17/2021] [Accepted: 01/29/2021] [Indexed: 11/24/2022] Open
Abstract
Foot-and-mouth disease virus (FMDV) 2A constructs have been successfully used for the production of “Golden Rice”, a β-carotene producing rice strain. However, to allay public fears and opposition to plants carrying a mammalian pathogenic viral sequence, 2A-like synthetic sequences from Thosea asigna virus and Infectious myonecrosis virus were used to coordinate the coexpression of carotenoid biosynthetic genes. Here, up to four carotenogenic genes encoding PSY, CRTI, BCH and BKT were concatenated and produced β-carotene, zeaxanthin, and ketocarotenoids (astaxanthin and adonixanthin) in transgenic rice seeds displaying color variation due to the difference in carotenoid content and composition. Carotenogenic genes upto four were concatenated via three 2A-like peptides into single cistrons. Polycistrons stepwisely biosynthesized β-carotene, zeaxanthin and ketocarotenoids in rice. A Thosea asigna viral 2A peptide is a good alternative to FMDV 2A for plant biotechnology.
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Affiliation(s)
- Ye Sol Jeong
- Department of Genetic Engineering and Graduate School of Biotechnology, Kyung Hee University, Yongin, 17104, Republic of Korea.,Department of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea.,National Academy of Agricultural Science, Rural Development Administration, Jeonju, 54874, Republic of Korea
| | - Hyung-Keun Ku
- Department of Genetic Engineering and Graduate School of Biotechnology, Kyung Hee University, Yongin, 17104, Republic of Korea
| | - Young-Joo Jung
- Department of Genetic Engineering and Graduate School of Biotechnology, Kyung Hee University, Yongin, 17104, Republic of Korea
| | - Jae Kwang Kim
- Division of Life Sciences and Bio-Resource and Environmental Center, Incheon National University, Incheon, 22012, Republic of Korea
| | - Kyoung Bok Lee
- Division of Life Sciences and Bio-Resource and Environmental Center, Incheon National University, Incheon, 22012, Republic of Korea
| | - Ju-Kon Kim
- Crop Biotechnology Institute/GreenBio Science and Technology, Seoul National University, Pyeongchang, 25354, Republic of Korea
| | - Sun-Hyung Lim
- National Academy of Agricultural Science, Rural Development Administration, Jeonju, 54874, Republic of Korea.,Current Address: School of Biotechnology, Division of Horticultural Biotechnology, Hankyong National University, Anseong, 17579, Republic of Korea
| | - Dongho Lee
- Department of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea
| | - Sun-Hwa Ha
- Department of Genetic Engineering and Graduate School of Biotechnology, Kyung Hee University, Yongin, 17104, Republic of Korea
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21
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Barnum CR, Endelman BJ, Shih PM. Utilizing Plant Synthetic Biology to Improve Human Health and Wellness. FRONTIERS IN PLANT SCIENCE 2021; 12:691462. [PMID: 34504505 PMCID: PMC8421571 DOI: 10.3389/fpls.2021.691462] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Accepted: 08/03/2021] [Indexed: 05/13/2023]
Abstract
Plants offer a vast source of bioactive chemicals with the potential to improve human health through the prevention and treatment of disease. However, many potential therapeutics are produced in small amounts or in species that are difficult to cultivate. The rapidly evolving field of plant synthetic biology provides tools to capitalize on the inventive chemistry of plants by transferring metabolic pathways for therapeutics into far more tenable plants, increasing our ability to produce complex pharmaceuticals in well-studied plant systems. Plant synthetic biology also provides methods to enhance the ability to fortify crops with nutrients and nutraceuticals. In this review, we discuss (1) the potential of plant synthetic biology to improve human health by generating plants that produce pharmaceuticals, nutrients, and nutraceuticals and (2) the technological challenges hindering our ability to generate plants producing health-promoting small molecules.
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Affiliation(s)
- Collin R. Barnum
- Department of Plant Biology, University of California, Davis, Davis, CA, United States
| | - Benjamin J. Endelman
- Department of Plant Biology, University of California, Davis, Davis, CA, United States
| | - Patrick M. Shih
- Department of Plant Biology, University of California, Davis, Davis, CA, United States
- Lawrence Berkeley National Laboratory, Environmental Genomics and Systems Biology Division, Berkeley, CA, United States
- Feedstocks Division, Joint BioEnergy Institute, Emeryville, CA, United States
- Genome Center, University of California, Davis, Davis, CA, United States
- Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA, United States
- Innovative Genomics Institute, University of California, Berkeley, Berkeley, CA, United States
- *Correspondence: Patrick M. Shih,
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22
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Lee JH, Won HJ, Oh ES, Oh MH, Jung JH. Golden Gate Cloning-Compatible DNA Replicon/2A-Mediated Polycistronic Vectors for Plants. FRONTIERS IN PLANT SCIENCE 2020; 11:559365. [PMID: 33193484 PMCID: PMC7609577 DOI: 10.3389/fpls.2020.559365] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 09/30/2020] [Indexed: 05/31/2023]
Abstract
The expression of multiple proteins and high-throughput vector assembly system are highly relevant in the field of plant genetic engineering and synthetic biology. Deployment of the self-cleaving 2A peptide that mediates polycistronic gene expression has been an effective strategy for multigene expression, as it minimizes issues in coordinated transgene regulation and trait staking in plants. However, efficient vector assembly systems optimized for 2A peptide-mediated polycistronic expression are currently unavailable. Furthermore, it is unclear whether protein expression levels are influenced by the transgene position in the polycistronic expression cassette. In this article, we present Golden Gate cloning-compatible modular systems allowing rapid and flexible construction of polycistronic expression vectors applicable for plants. The genetic modules comprised 2A peptides (T2A and P2A)-linked tricistron expression cassette and its acceptor backbones, named pGO-DV1 and pGO-DV2. While both acceptor backbones were binary T-DNA vectors, pGO-DV2 was specially designed to function as a DNA replicon enhancing gene expression levels. Using the Golden Gate cloning, a set of six tricistronic vectors was constructed, whereby three transgenes encoding fluorescent proteins (mCherry, eYFP, and eGFP) were combinatorially placed along the expression cassette in each of the binary vectors. Transient expression of the construct in tobacco leaves revealed that the expression levels of three fluorescent proteins were comparable each other regardless of the gene positions in the tricistronic expression cassette. pGO-DV2-based constructs were able to increase protein expression level by up to 71%, as compared to pGO-DV1-based constructs.
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Affiliation(s)
- Jae Hoon Lee
- Smart Farm Research Center, Korea Institute of Science and Technology, Gangneung, South Korea
| | - Hyo Jun Won
- Smart Farm Research Center, Korea Institute of Science and Technology, Gangneung, South Korea
- Division of Bio-Medical Science & Technology, KIST School, Korea University of Science and Technology, Daejeon, South Korea
| | - Eun-Seok Oh
- Department of Biological Sciences, College of Biological Sciences and Biotechnology, Chungnam National University, Daejeon, South Korea
| | - Man-Ho Oh
- Department of Biological Sciences, College of Biological Sciences and Biotechnology, Chungnam National University, Daejeon, South Korea
| | - Je Hyeong Jung
- Smart Farm Research Center, Korea Institute of Science and Technology, Gangneung, South Korea
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23
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Zhang L, Lu G, Huang X, Guo H, Su X, Han L, Zhang Y, Qi Z, Xiao Y, Cheng H. Overexpression of the caryophyllene synthase gene GhTPS1 in cotton negatively affects multiple pests while attracting parasitoids. PEST MANAGEMENT SCIENCE 2020; 76:1722-1730. [PMID: 31762173 DOI: 10.1002/ps.5695] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Revised: 11/12/2019] [Accepted: 11/20/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUD Volatile terpenes can act as ecological signals to affect insect behavior. It has been proposed that the manipulation of terpenes in plants can help to control herbivore pests. In order to investigate the potential pest management function of (E)-β-caryophyllene in cotton plants, the (E)-β-caryophyllene synthase gene (GhTPS1) was inserted into Gossypium hirsutum variety R15 to generate overexpression lines. RESULTS Four GhTPS1-transgenic lines were generated, and GhTPS1 expression in transgenic L18 and L46 lines was 3-5-fold higher than in R15 plants. The transgenic L18 and L46 lines also emitted significantly more (E)-β-caryophyllene than R15. In laboratory bioassays, L18 and L46 plants reduced pests Apolygus lucorum, Aphis gossypii and Helicoverpa armigera, and attracted parasitoids Peristenus spretus and Aphidius gifuensis, but not Microplitis mediator. In open-field trials, L18 and L46 plants reduced A. lucorum, Adelphocoris suturalis and H. armigera, but had no significant effects on predators. CONCLUSION Our findings suggest that L18 and L46 plants reduce several major hemipteran and lepidopteran cotton pests, whereas, two parasitoids P. spretus and A. gifuensis, were attracted by L18 and L46 plants. This study shows that overexpressing GhTPS1 in cotton may help to improve pest management in cotton fields. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Lihua Zhang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- College of Life Sciences, Inner Mongolia University, Hohhot, China
| | - Guoqing Lu
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xinzheng Huang
- Department of Entomology and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, China
| | - Huiming Guo
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xiaofeng Su
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Lida Han
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yongjun Zhang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Zhi Qi
- College of Life Sciences, Inner Mongolia University, Hohhot, China
| | - Yutao Xiao
- Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Hongmei Cheng
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
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24
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Duan HR, Wang LR, Cui GX, Zhou XH, Duan XR, Yang HS. Identification of the regulatory networks and hub genes controlling alfalfa floral pigmentation variation using RNA-sequencing analysis. BMC PLANT BIOLOGY 2020; 20:110. [PMID: 32164566 PMCID: PMC7068929 DOI: 10.1186/s12870-020-2322-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2019] [Accepted: 02/28/2020] [Indexed: 05/11/2023]
Abstract
BACKGROUND To understand the gene expression networks controlling flower color formation in alfalfa, flowers anthocyanins were identified using two materials with contrasting flower colors, namely Defu and Zhongtian No. 3, and transcriptome analyses of PacBio full-length sequencing combined with RNA sequencing were performed, across four flower developmental stages. RESULTS Malvidin and petunidin glycoside derivatives were the major anthocyanins in the flowers of Defu, which were lacking in the flowers of Zhongtian No. 3. The two transcriptomic datasets provided a comprehensive and systems-level view on the dynamic gene expression networks underpinning alfalfa flower color formation. By weighted gene coexpression network analyses, we identified candidate genes and hub genes from the modules closely related to floral developmental stages. PAL, 4CL, CHS, CHR, F3'H, DFR, and UFGT were enriched in the important modules. Additionally, PAL6, PAL9, 4CL18, CHS2, 4 and 8 were identified as hub genes. Thus, a hypothesis explaining the lack of purple color in the flower of Zhongtian No. 3 was proposed. CONCLUSIONS These analyses identified a large number of potential key regulators controlling flower color pigmentation, thereby providing new insights into the molecular networks underlying alfalfa flower development.
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Affiliation(s)
- Hui-Rong Duan
- Lanzhou Institute of Husbandry and Pharmaceutical Science, Chinese Academy of Agricultural Sciences, Lanzhou, China
| | - Li-Rong Wang
- College of Ecological Environment and Resources, Qinghai Nationalities University, Xining, China
| | - Guang-Xin Cui
- Lanzhou Institute of Husbandry and Pharmaceutical Science, Chinese Academy of Agricultural Sciences, Lanzhou, China
| | - Xue-Hui Zhou
- Lanzhou Institute of Husbandry and Pharmaceutical Science, Chinese Academy of Agricultural Sciences, Lanzhou, China
| | - Xiao-Rong Duan
- Shanxi Electric Power Research Institute, State Grid Corporation of China, Taiyuan, China
| | - Hong-Shan Yang
- Lanzhou Institute of Husbandry and Pharmaceutical Science, Chinese Academy of Agricultural Sciences, Lanzhou, China.
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25
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Zhu Q, Wang B, Tan J, Liu T, Li L, Liu YG. Plant Synthetic Metabolic Engineering for Enhancing Crop Nutritional Quality. PLANT COMMUNICATIONS 2020; 1:100017. [PMID: 33404538 PMCID: PMC7747972 DOI: 10.1016/j.xplc.2019.100017] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2019] [Revised: 12/05/2019] [Accepted: 12/17/2019] [Indexed: 05/08/2023]
Abstract
Nutrient deficiencies in crops are a serious threat to human health, especially for populations in poor areas. To overcome this problem, the development of crops with nutrient-enhanced traits is imperative. Biofortification of crops to improve nutritional quality helps combat nutrient deficiencies by increasing the levels of specific nutrient components. Compared with agronomic practices and conventional plant breeding, plant metabolic engineering and synthetic biology strategies are more effective and accurate in synthesizing specific micronutrients, phytonutrients, and/or bioactive components in crops. In this review, we discuss recent progress in the field of plant synthetic metabolic engineering, specifically in terms of research strategies of multigene stacking tools and engineering complex metabolic pathways, with a focus on improving traits related to micronutrients, phytonutrients, and bioactive components. Advances and innovations in plant synthetic metabolic engineering would facilitate the development of nutrient-enriched crops to meet the nutritional needs of humans.
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Affiliation(s)
- Qinlong Zhu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources; College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou 510642, China
| | - Bin Wang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources; College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Jiantao Tan
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources; College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Taoli Liu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources; College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Li Li
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14850, USA
- Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14850, USA
| | - Yao-Guang Liu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources; College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
- Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou 510642, China
- Corresponding author
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26
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Riaz B, Chen H, Wang J, Du L, Wang K, Ye X. Overexpression of Maize ZmC1 and ZmR Transcription Factors in Wheat Regulates Anthocyanin Biosynthesis in a Tissue-Specific Manner. Int J Mol Sci 2019; 20:E5806. [PMID: 31752300 PMCID: PMC6887777 DOI: 10.3390/ijms20225806] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2019] [Revised: 11/15/2019] [Accepted: 11/15/2019] [Indexed: 11/17/2022] Open
Abstract
Maize ZmC1 and ZmR transcription factors belong to the MYB-type and bHLH families, respectively, and control anthocyanin biosynthesis. In this study, Agrobacterium-mediated transformation was used to generate transgenic wheat plants that overexpress ZmC1 and ZmR or both, with the objective of developing anthocyanin-enriched wheat germplasm. Three kinds of stable transgenic wheat lines were obtained. The integration of target genes in the transgenic wheat plants was confirmed by fluorescence in situ hybridization (FISH) analysis. We found that single overexpression of ZmC1 regulates pigmentation in the vegetative tissues such as coleoptiles, auricles, and stems. The single overexpression of ZmR controls the coloration in reproductive tissue like spikelets and seeds. The simultaneous overexpression of ZmC1 and ZmR showed the strongest pigmentation in almost all tissues. Furthermore, quantitative real-time PCR (qRT-PCR) analysis revealed that expression of the two transgenes, and of two conserved homologous and six associated structural genes involved in anthocyanin biosynthesis in wheat were greatly up-regulated in the transgenic plants. Similarly, quantitative analysis for anthocyanin amounts based on HPLC-MS also confirmed that the transgenic wheat plants with combined overexpression of ZmC1 and ZmR accumulated the highest quantity of pigment products. Moreover, developing seeds overexpressing ZmR exposed to light conditions showed up-regulated transcript levels of anthocyanin biosynthesis-related genes compared to dark exposure, which suggests an important role of light in regulating anthocyanin biosynthesis. This study provides a foundation for breeding wheat materials with high anthocyanin accumulation and understanding the mechanism of anthocyanin biosynthesis in wheat.
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Affiliation(s)
| | | | | | | | - Ke Wang
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (B.R.); (H.C.); (J.W.); (L.D.)
| | - Xingguo Ye
- Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (B.R.); (H.C.); (J.W.); (L.D.)
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27
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Isolation and characterization of a novel seed-specific promoter from peanut (Arachis hypogaea L.). Mol Biol Rep 2019; 46:3183-3191. [PMID: 30937655 DOI: 10.1007/s11033-019-04775-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Accepted: 03/19/2019] [Indexed: 10/27/2022]
Abstract
Peanut, whose seeds are ideal bioreactors for the production of recombinant proteins and/or nutrient metabolites, is one of the most important crop species worldwide. As important molecular tools, seed-specific promoters (SSPs) can direct the expression of foreign proteins specifically in seeds to avoid constitutive expression that can damage plants. However, few SSPs have been identified from this species. In this study, we isolated a novel SSP (we named it AHSSP2) from peanut. Several cis-acting elements commonly found in SSPs, including 3 copies of RYREPEAT elements, were dispersed throughout the 1970-bp sequence of AHSSP2. The sequence was then substituted in place of the 35S promoter sequence in a pBI121 plasmid, which was subsequently transformed into Arabidopsis. Beta-glucuronidase (GUS) staining showed that AHSSP2 can drive GUS gene expression in the mature seeds of transgenic Arabidopsis, excluding within the testa. The cotyledons and hypocotyls of the germinating seeds of transgenic Arabidopsis seedlings also exhibited GUS activity, even after the seedlings became adult plants. No GUS activity was detected in nontransformed Arabidopsis at any stage. These results strongly suggested that AHSSP2 could drive the expression of foreign genes in a seed-specific manner. This study enriched SSP resources, and the results showed that AHSSP2 could be potentially utilized in peanut and other crop species to improve seed quality, such as modifications to seed oil content.
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28
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Yuan C, Sun Q, Kong Y. Genome-wide mining seed-specific candidate genes from peanut for promoter cloning. PLoS One 2019; 14:e0214025. [PMID: 30921362 PMCID: PMC6438489 DOI: 10.1371/journal.pone.0214025] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2019] [Accepted: 03/05/2019] [Indexed: 01/18/2023] Open
Abstract
Peanut seeds are ideal bioreactors for the production of foreign recombinant proteins and/or nutrient metabolites. Seed-Specific Promoters (SSPs) are important molecular tools for bioreactor research. However, few SSPs have been characterized in peanut seeds. The mining of Seed-Specific Candidate Genes (SSCGs) is a prerequisite for promoter cloning. Here, we described an approach for the genome-wide mining of SSCGs via comparative gene expression between seed and nonseed tissues. Three hundred thirty-seven SSCGs were ultimately identified, and the top 108 SSCGs were characterized. Gene Ontology (GO) analysis revealed that some SSCGs were involved in seed development, allergens, seed storage and fatty acid metabolism. RY REPEAT and GCN4 motifs, which are commonly found in SSPs, were dispersed throughout most of the promoters of SSCGs. Expression pattern analysis revealed that all 108 SSCGs were expressed specifically or preferentially in the seed. These results indicated that the promoters of the 108 SSCGs may perform functions in a seed-specific and/or seed-preferential manner. Moreover, a novel SSP was cloned and characterized from a paralogous gene of SSCG29 from cultivated peanut. Together with the previously characterized SSP of the SSCG5 paralogous gene in cultivated peanut, these results implied that the method for SSCG identification in this study was feasible and accurate. The SSCGs identified in this work could be widely applied to SSP cloning by other researchers. Additionally, this study identified a low-cost, high-throughput approach for exploring tissue-specific genes in other crop species.
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Affiliation(s)
- Cuiling Yuan
- Key Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, Shandong, China
- Shandong Peanut Research Institute, Qingdao, Shandong, China
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Quanxi Sun
- Shandong Peanut Research Institute, Qingdao, Shandong, China
- * E-mail: (YK); (QS)
| | - Yingzhen Kong
- Key Laboratory for Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, Shandong, China
- * E-mail: (YK); (QS)
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29
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Production of eicosapentaenoic acid (EPA, 20:5n-3) in transgenic peanut (Arachis hypogaea L.) through the alternative Δ8-desaturase pathway. Mol Biol Rep 2018; 46:333-342. [DOI: 10.1007/s11033-018-4476-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2018] [Accepted: 11/07/2018] [Indexed: 01/23/2023]
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30
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Structural and Functional Analysis of a Bidirectional Promoter from Gossypium hirsutum in Arabidopsis. Int J Mol Sci 2018; 19:ijms19113291. [PMID: 30360512 PMCID: PMC6274729 DOI: 10.3390/ijms19113291] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2018] [Revised: 10/17/2018] [Accepted: 10/19/2018] [Indexed: 12/30/2022] Open
Abstract
Stacked traits have become an important trend in the current development of genomically modified crops. The bidirectional promoter can not only prevent the co-suppression of multigene expression, but also increase the efficiency of the cultivation of transgenic plants with multigenes. In Gossypium hirsutum, Ghrack1 and Ghuhrf1 are head-to-head gene pairs located on chromosome D09. We cloned the 1429-bp intergenic region between the Ghrack1 and Ghuhrf1 genes from Gossypium hirsutum. The cloned DNA fragment GhZU had the characteristics of a bidirectional promoter, with 38.7% G+C content, three CpG islands and no TATA-box. Using gfp and gus as reporter genes, a series of expression vectors were constructed into young leaves of tobacco. The histochemical GUS (Beta-glucuronidase) assay and GFP (green fluorescence protein) detection results indicated that GhZU could drive the expression of the reporter genes gus and gfp simultaneously in both orientations. Furthermore, we transformed the expression vectors into Arabidopsis and found that GUS was concentrated at vigorous growth sites, such as the leaf tip, the base of the leaves and pod, and the stigma. GFP was also mainly expressed in the epidermis of young leaves. In summary, we determined that the intergenic region GhZU was an orientation-dependent bidirectional promoter, and this is the first report on the bidirectional promoter from Gossypium hirsutum. Our findings in this study are likely to enhance understanding on the regulatory mechanisms of plant bidirectional promoters.
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31
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Liu X, Li S, Yang W, Mu B, Jiao Y, Zhou X, Zhang C, Fan Y, Chen R. Synthesis of Seed-Specific Bidirectional Promoters for Metabolic Engineering of Anthocyanin-Rich Maize. PLANT & CELL PHYSIOLOGY 2018; 59:1942-1955. [PMID: 29917151 DOI: 10.1093/pcp/pcy110] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Accepted: 06/05/2018] [Indexed: 05/03/2023]
Abstract
Tissue-specific promoters play an important role in plant molecular farming. Here, we describe a strategy to modify the tissue specificity of a maize embryo-specific bidirectional promoter PZmBD1. Six types of cis-elements, i.e. RY repeats (R), GCN4 (G), the prolamin box (P), Skn-1 (S), and the ACGT and AACA (A) motifs, were collected and fused to PZmBD1 to generate eight chimeric putative bidirectional promoters. Qualitative and quantitative analysis of reporter genes driven by the promoters showed that two promoters exhibited high seed-specific bidirectional activity in maize transient and stable transformed systems. The stronger one was chosen and fused to the intergenic region of two gene clusters consisting of four anthocyanin biosynthesis-related genes (ZmBz1, ZmBz2, ZmC1 and ZmR2) and seven reporter genes, resulting in the first embryo and endosperm anthocyanin-rich purple maize. Anthocyanin analysis showed that the total anthocyanin content reaches 2,910 mg kg-1 DW in transgenic maize and cyanidin is the major anthocyanin in transgenic maize, as in natural varieties. The expression profile analysis of endogenous genes showed that the anthocyanin biosynthesis pathway was activated by two transgenic transcription factor genes ZmC1 and ZmR2. Our results indicate that both the modification strategy and these functionally characterized tissue-specific bidirectional promoters generated could be used for genetic research and development of plant biotechnology products. The anthocyanin-rich purple maize could provide economic natural colorants for the food and beverage industry, and valuable germplasm for developing anthocyanin-rich fresh corn.
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Affiliation(s)
- Xiaoqing Liu
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Suzhen Li
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Wenzhu Yang
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Bona Mu
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Yong Jiao
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
- Key Laboratory of Crop Biology of Anhui Province, Anhui Agricultural University, Hefei, China
| | - Xiaojin Zhou
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Chunyi Zhang
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Yunliu Fan
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
| | - Rumei Chen
- Department of Crop Genomics & Genetic Improvement, Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, 12 ZhongGuanCun South Street, Beijing, China
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