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Chen W, Wang H. OCTSharp: an open-source and real-time OCT imaging software based on C. BIOMEDICAL OPTICS EXPRESS 2023; 14:6060-6071. [PMID: 38021120 PMCID: PMC10659780 DOI: 10.1364/boe.505308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 10/13/2023] [Accepted: 10/13/2023] [Indexed: 12/01/2023]
Abstract
Optical coherence tomography (OCT) demands massive data processing and real-time displaying during high-speed imaging. Current OCT imaging software is predominantly based on C++, aiming to maximize performance through low-level hardware management. However, the steep learning curve of C++ hinders agile prototyping, particularly for research purposes. Moreover, manual memory management poses challenges for novice developers and may lead to potential security issues. To address these limitations, OCTSharp is developed as an open-source OCT software based on the memory-safe language C#. Within the managed C# environment, OCTSharp offers synchronized hardware control, minimal memory management, and GPU-based parallel processing. The software has been thoroughly tested and proven capable of supporting real-time image acquisition, processing, and visualization with spectral-domain OCT systems equipped with the latest advanced hardware. With these enhancements, OCTSharp is positioned to serve as an open-source platform tailored for various applications.
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Affiliation(s)
- Weihao Chen
- Department of Chemical, Paper, and Biomedical Engineering, Miami University, Oxford, OH, USA
- Department of Biology, Miami University, Oxford, OH, USA
| | - Hui Wang
- Department of Biology, Miami University, Oxford, OH, USA
- Department of Electrical and Computer Engineering Miami University, Oxford, OH, USA
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2
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Wang C, Yin Z, He B, Chen Z, Hu Z, Shi Y, Zhang X, Zhang N, Jing L, Wang G, Xue P. Polarization-isolated stretched-pulse mode-locked swept laser for 10.3-MHz A-line rate optical coherence tomography. OPTICS LETTERS 2023; 48:4025-4028. [PMID: 37527109 DOI: 10.1364/ol.495786] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 07/10/2023] [Indexed: 08/03/2023]
Abstract
Stretched-pulse mode-locked (SPML) lasing based on a chirped fiber Bragg grating (CFBG) has proven to be a powerful method to generate wavelength-swept lasers at speeds of tens of megahertz. However, light transmitted through the CFBG may lead to undesirable laser oscillation that disrupts the mechanism of the laser active mode locking in the theta ring cavity. In this Letter, we demonstrate a simple and low-cost approach to suppress the transmitted light and achieve an effective duty cycle of ∼100% with only one CFBG and no need for intra-cavity semiconductor optical amplifier (SOA) modulation, extra-cavity optical buffering, and post amplification. By utilizing polarization isolation of the bi-directional CFBG, a swept laser centered at 1305 nm, with repetition rate of 10.3 MHz, optical power of 84 mW, and 3 dB bandwidth of 109 nm, is demonstrated. Ultrahigh speed 3D optical coherence tomography (OCT) structural imaging of a human palm in vivo using this swept laser is also demonstrated. We believe that this ultrahigh speed swept laser will greatly promote the OCT technique for industrial and biomedical applications.
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3
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Image enhancement of wide-field retinal optical coherence tomography angiography by super-resolution angiogram reconstruction generative adversarial network. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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4
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Alexopoulos P, Madu C, Wollstein G, Schuman JS. The Development and Clinical Application of Innovative Optical Ophthalmic Imaging Techniques. Front Med (Lausanne) 2022; 9:891369. [PMID: 35847772 PMCID: PMC9279625 DOI: 10.3389/fmed.2022.891369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Accepted: 05/23/2022] [Indexed: 11/22/2022] Open
Abstract
The field of ophthalmic imaging has grown substantially over the last years. Massive improvements in image processing and computer hardware have allowed the emergence of multiple imaging techniques of the eye that can transform patient care. The purpose of this review is to describe the most recent advances in eye imaging and explain how new technologies and imaging methods can be utilized in a clinical setting. The introduction of optical coherence tomography (OCT) was a revolution in eye imaging and has since become the standard of care for a plethora of conditions. Its most recent iterations, OCT angiography, and visible light OCT, as well as imaging modalities, such as fluorescent lifetime imaging ophthalmoscopy, would allow a more thorough evaluation of patients and provide additional information on disease processes. Toward that goal, the application of adaptive optics (AO) and full-field scanning to a variety of eye imaging techniques has further allowed the histologic study of single cells in the retina and anterior segment. Toward the goal of remote eye care and more accessible eye imaging, methods such as handheld OCT devices and imaging through smartphones, have emerged. Finally, incorporating artificial intelligence (AI) in eye images has the potential to become a new milestone for eye imaging while also contributing in social aspects of eye care.
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Affiliation(s)
- Palaiologos Alexopoulos
- Department of Ophthalmology, NYU Langone Health, NYU Grossman School of Medicine, New York, NY, United States
| | - Chisom Madu
- Department of Ophthalmology, NYU Langone Health, NYU Grossman School of Medicine, New York, NY, United States
| | - Gadi Wollstein
- Department of Ophthalmology, NYU Langone Health, NYU Grossman School of Medicine, New York, NY, United States
- Department of Biomedical Engineering, NYU Tandon School of Engineering, Brooklyn, NY, United States
- Center for Neural Science, College of Arts & Science, New York University, New York, NY, United States
| | - Joel S. Schuman
- Department of Ophthalmology, NYU Langone Health, NYU Grossman School of Medicine, New York, NY, United States
- Department of Biomedical Engineering, NYU Tandon School of Engineering, Brooklyn, NY, United States
- Center for Neural Science, College of Arts & Science, New York University, New York, NY, United States
- Department of Electrical and Computer Engineering, NYU Tandon School of Engineering, Brooklyn, NY, United States
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5
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Huang D, Shi Y, Li F, Wai PKA. Fourier Domain Mode Locked Laser and Its Applications. SENSORS 2022; 22:s22093145. [PMID: 35590839 PMCID: PMC9105910 DOI: 10.3390/s22093145] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Revised: 04/05/2022] [Accepted: 04/12/2022] [Indexed: 11/16/2022]
Abstract
The sweep rate of conventional short-cavity lasers with an intracavity-swept filter is limited by the buildup time of laser signals from spontaneous emissions. The Fourier domain mode-locked (FDML) laser was proposed to overcome the limitations of buildup time by inserting a long fiber delay in the cavity to store the whole swept signal and has attracted much interest in both theoretical and experimental studies. In this review, the theoretical models to understand the dynamics of the FDML laser and the experimental techniques to realize high speed, wide sweep range, long coherence length, high output power and highly stable swept signals in FDML lasers will be discussed. We will then discuss the applications of FDML lasers in optical coherence tomography (OCT), fiber sensing, precision measurement, microwave generation and nonlinear microscopy.
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Affiliation(s)
- Dongmei Huang
- Photonics Research Institute, Department of Electrical Engineering, The Hong Kong Polytechnic University, Hong Kong, China; (D.H.); (Y.S.)
- Shenzhen Research Institute, The Hong Kong Polytechnic University, Shenzhen 518057, China;
| | - Yihuan Shi
- Photonics Research Institute, Department of Electrical Engineering, The Hong Kong Polytechnic University, Hong Kong, China; (D.H.); (Y.S.)
- Shenzhen Research Institute, The Hong Kong Polytechnic University, Shenzhen 518057, China;
| | - Feng Li
- Shenzhen Research Institute, The Hong Kong Polytechnic University, Shenzhen 518057, China;
- Photonics Research Institute, Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hong Kong, China
- Correspondence:
| | - P. K. A. Wai
- Shenzhen Research Institute, The Hong Kong Polytechnic University, Shenzhen 518057, China;
- Photonics Research Institute, Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hong Kong, China
- Department of Physics, Hong Kong Baptist University, Hong Kong, China
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6
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Mazlin V, Xiao P, Irsch K, Scholler J, Groux K, Grieve K, Fink M, Boccara AC. Optical phase modulation by natural eye movements: application to time-domain FF-OCT image retrieval. BIOMEDICAL OPTICS EXPRESS 2022; 13:902-920. [PMID: 35284184 PMCID: PMC8884228 DOI: 10.1364/boe.445393] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Revised: 12/10/2021] [Accepted: 12/10/2021] [Indexed: 05/24/2023]
Abstract
Eye movements are commonly seen as an obstacle to high-resolution ophthalmic imaging. In this context we study the natural axial movements of the in vivo human eye and show that they can be used to modulate the optical phase and retrieve tomographic images via time-domain full-field optical coherence tomography (TD-FF-OCT). This approach opens a path to a simplified ophthalmic TD-FF-OCT device, operating without the usual piezo motor-camera synchronization. The device demonstrates in vivo human corneal images under the different image retrieval schemes (2-phase and 4-phase) and different exposure times (3.5 ms, 10 ms, 20 ms). Data on eye movements, acquired with a spectral-domain OCT with axial eye tracking (180 B-scans/s), are used to study the influence of ocular motion on the probability of capturing high-signal tomographic images without phase washout. The optimal combinations of camera acquisition speed and amplitude of piezo modulation are proposed and discussed.
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Affiliation(s)
- Viacheslav Mazlin
- ESPCI Paris, PSL University, CNRS, Langevin Institute, 1 Rue Jussieu, 75005 Paris, France
| | - Peng Xiao
- ESPCI Paris, PSL University, CNRS, Langevin Institute, 1 Rue Jussieu, 75005 Paris, France
- State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 510060, Guangzhou, China
| | - Kristina Irsch
- Vision Institute, Sorbonne University, CNRS, INSERM, 17 Rue Moreau, 75012 Paris, France
- Quinze-Vingts National Ophthalmology Hospital, 28 Rue de Charenton, 75012 Paris, France
| | - Jules Scholler
- ESPCI Paris, PSL University, CNRS, Langevin Institute, 1 Rue Jussieu, 75005 Paris, France
- Wyss Center for Bio and Neuroengineering, Chem. des Mines 9, 1202 Geneva, Switzerland
| | - Kassandra Groux
- ESPCI Paris, PSL University, CNRS, Langevin Institute, 1 Rue Jussieu, 75005 Paris, France
| | - Kate Grieve
- Vision Institute, Sorbonne University, CNRS, INSERM, 17 Rue Moreau, 75012 Paris, France
- Quinze-Vingts National Ophthalmology Hospital, 28 Rue de Charenton, 75012 Paris, France
| | - Mathias Fink
- ESPCI Paris, PSL University, CNRS, Langevin Institute, 1 Rue Jussieu, 75005 Paris, France
| | - A. Claude Boccara
- ESPCI Paris, PSL University, CNRS, Langevin Institute, 1 Rue Jussieu, 75005 Paris, France
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7
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Huang D, Li F, He Z, Cheng Z, Shang C, Wai PKA. 400 MHz ultrafast optical coherence tomography. OPTICS LETTERS 2020; 45:6675-6678. [PMID: 33325868 DOI: 10.1364/ol.409607] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 11/06/2020] [Indexed: 05/18/2023]
Abstract
An ultrafast time-stretched swept source with a sweep rate of 400 MHz is demonstrated based on the buffering of a 100 MHz femtosecond laser pulse train. To the best of our knowledge, this is the highest sweep rate of swept sources for optical coherence tomography (OCT) that has been reported. With a 10 dB sweep range of ∼100nm, an axial resolution of 19 µm is obtained in the OCT. OCT imaging of high-speed rotating disks is demonstrated. A composite complex apodization method is proposed and demonstrated to enhance the signal to noise ratio in the OCT imaging.
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8
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Liang S, Li X, Qin Y, Zhang J. Dynamic-range compression and contrast enhancement in swept-source optical coherence tomography systems with a frequency gain compensation amplifier. JOURNAL OF BIOMEDICAL OPTICS 2020; 25:JBO-200309LR. [PMID: 33247562 PMCID: PMC7695442 DOI: 10.1117/1.jbo.25.11.110502] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2020] [Accepted: 11/04/2020] [Indexed: 06/12/2023]
Abstract
SIGNIFICANCE Optical coherence tomography (OCT) has been widely used in clinical studies. However, the image quality of OCT decreases with increasing imaging depth since the light is rapidly attenuated in biological tissues. AIM We present a compensation approach to preserve weak high-frequency signals from deep structures and compress the dynamic range of the detected signal for superior analog-to-digital conversion and image display capability. APPROACH A homemade frequency gain compensation amplifier is designed and fabricated to amplify the electrical signal from a balanced photodetector and compensate for the signal attenuation in swept-source OCT (SSOCT). RESULTS It is demonstrated in imaging various objects that this cost-efficient technique effectively enhances the contrast of the deep tissue image. CONCLUSIONS A frequency gain compensation amplifier is designed and used to compress the dynamic range of the electrical signal detected by the photodetector of an SSOCT system, which enables weak signals from deep structures to be acquired by the ADC and displayed with enhanced local contrast.
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Affiliation(s)
- Shanshan Liang
- Sun Yat-Sen University, School of Electronics and Information Technology, Guangzhou, China
| | - Xinyu Li
- Sun Yat-Sen University, School of Electronics and Information Technology, Guangzhou, China
| | - Yao Qin
- Sun Yat-Sen University, School of Electronics and Information Technology, Guangzhou, China
| | - Jun Zhang
- Sun Yat-Sen University, School of Electronics and Information Technology, Guangzhou, China
- Guilin University of Electronic Technology, School of Artificial Intelligence, Guilin, China
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9
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Li R, Yin H, Hong J, Wang C, He B, Chen Z, Li Q, Xue P, Zhang X. Speckle reducing OCT using optical chopper. OPTICS EXPRESS 2020; 28:4021-4031. [PMID: 32122062 DOI: 10.1364/oe.382369] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Accepted: 12/23/2019] [Indexed: 06/10/2023]
Abstract
Optical coherence tomography (OCT) has been an important and powerful tool for biological research and clinical applications. However, speckle noise significantly degrades the image quality of OCT and has a negative impact on the clinical diagnosis accuracy. In this paper, we propose a novel speckle noise suppression technique which changes the spatial distribution of sample beam using a special optical chopper. Then a series of OCT images with uncorrelated speckle patterns could be captured and compounded to improve the image quality without degradation of resolution. Typical signal-to-noise ratio improvement of ∼6.4 dB is experimentally achieved in tissue phantom imaging with average number n = 100. Furthermore, compared with conventional OCT, the proposed technique is demonstrated to view finer and clearer biological structures in human skin in vivo, such as sweat glands and blood vessels. The advantages of low cost, simple structure and compact integration will benefit the future design of handheld or endoscopic probe for biomedical imaging in research and clinical applications.
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10
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Malone JD, El-Haddad MT, Yerramreddy SS, Oguz I, Tao YK. Handheld spectrally encoded coherence tomography and reflectometry for motion-corrected ophthalmic optical coherence tomography and optical coherence tomography angiography. NEUROPHOTONICS 2019; 6:041102. [PMID: 32042852 PMCID: PMC6991137 DOI: 10.1117/1.nph.6.4.041102] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2019] [Accepted: 06/12/2019] [Indexed: 05/05/2023]
Abstract
Optical coherence tomography (OCT) is the gold standard for quantitative ophthalmic imaging. The majority of commercial and research systems require patients to fixate and be imaged in a seated upright position, which limits the ability to perform ophthalmic imaging in bedridden or pediatric patients. Handheld OCT devices overcome this limitation, but image quality often suffers due to a lack of real-time aiming and patient eye and photographer motion. We describe a handheld spectrally encoded coherence tomography and reflectometry (SECTR) system that enables simultaneous en face reflectance and cross-sectional OCT imaging. The handheld probe utilizes a custom double-pass scan lens for fully telecentric OCT scanning with a compact optomechanical design and a rapid-prototyped enclosure to reduce the overall system size and weight. We also introduce a variable velocity scan waveform that allows for simultaneous acquisition of densely sampled OCT angiography (OCTA) volumes and widefield reflectance images, which enables high-resolution vascular imaging with precision motion-tracking for volumetric motion correction and multivolumetric mosaicking. Finally, we demonstrate in vivo human retinal OCT and OCT angiography (OCTA) imaging using handheld SECTR on a healthy volunteer. Clinical translation of handheld SECTR will allow for high-speed, motion-corrected widefield OCT and OCTA imaging in bedridden and pediatric patients who may benefit ophthalmic disease diagnosis and monitoring.
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Affiliation(s)
- Joseph D. Malone
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
| | - Mohamed T. El-Haddad
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
| | - Suhaas S. Yerramreddy
- Vanderbilt University, Department of Electrical Engineering and Computer Science, Nashville, Tennessee, United States
| | - Ipek Oguz
- Vanderbilt University, Department of Electrical Engineering and Computer Science, Nashville, Tennessee, United States
| | - Yuankai K. Tao
- Vanderbilt University, Department of Biomedical Engineering, Nashville, Tennessee, United States
- Address all correspondence to Yuankai K. Tao, E-mail:
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11
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Liao W, Hsieh J, Wang C, Zhang W, Ai S, Peng Z, Chen Z, He B, Zhang X, Zhang N, Tang B, Xue P. Compressed sensing spectral domain optical coherence tomography with a hardware sparse-sampled camera. OPTICS LETTERS 2019; 44:2955-2958. [PMID: 31199354 DOI: 10.1364/ol.44.002955] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Accepted: 05/03/2019] [Indexed: 05/21/2023]
Abstract
We present a sparse-sampled camera for compressed sensing spectral domain optical coherence tomography (CS SD-OCT), which is mainly composed of a novel mask with specially designed coating and a commercially available CCD camera. The sparse-sampled camera under-samples the SD-OCT spectrum in hardware, thus reduces the acquired image data and can achieve faster A-scan speed than conventional CCD camera with the same pixel number. Compared with a conventional SD-OCT system, the CS SD-OCT system equipped with the sparse-sampled camera has better fall-off and SNR performance. CS-OCT imaging of bio-tissue is also demonstrated.
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12
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Zhang W, Zhang X, Wang C, Liao W, Ai S, Hsieh J, Zhang N, Xue P. Optical computing optical coherence tomography with conjugate suppression by dispersion. OPTICS LETTERS 2019; 44:2077-2080. [PMID: 30985815 DOI: 10.1364/ol.44.002077] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Accepted: 03/15/2019] [Indexed: 06/09/2023]
Abstract
For all imaging techniques, such as optical coherence tomography (OCT), fast imaging speed is always of high demand. Optical computing OCT (OC2T) has achieved ultrahigh speed for real time 3D imaging without post data processing, but its spatial resolution is lowered down due to an imperfect Fourier transformation in the optical computing process. In this Letter, we illustrate the theory of OC2T and prove that the dispersion imbalance between reference arm and sample arm may be introduced to improve the resolution. Furthermore, this novel OC2T technique can also enable a conjugate restrained OCT imaging without any data processing, achieving ∼2 times higher resolution than typical OC2T. At an imaging speed of 5M-A-scans per second, the dispersion imbalance OC2T has strong ability of restraining the conjugate signal with a conjugate signal rejection ratio of 2.6.
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13
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Acceleration of OCT Signal Processing with Lookup Table Method for Logarithmic Transformation. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9071278] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Real-time Fourier domain optical coherence tomography (FDOCT) has been widely used in clinical applications. In order to accelerate the imaging processing and display of FDOCT, an alternative lookup table-based strategy for logarithmic transformation was presented. In this paper, real-time and high-quality FDOCT imaging display of biological tissues at an A-line rate of 62 kHz was demonstrated by optimizing the logarithmic calculation.
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14
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Ang M, Baskaran M, Werkmeister RM, Chua J, Schmidl D, Aranha dos Santos V, Garhöfer G, Mehta JS, Schmetterer L. Anterior segment optical coherence tomography. Prog Retin Eye Res 2018; 66:132-156. [DOI: 10.1016/j.preteyeres.2018.04.002] [Citation(s) in RCA: 216] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Revised: 02/20/2018] [Accepted: 04/04/2018] [Indexed: 02/03/2023]
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15
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Tozburun S, Blatter C, Siddiqui M, Meijer EFJ, Vakoc BJ. Phase-stable Doppler OCT at 19 MHz using a stretched-pulse mode-locked laser. BIOMEDICAL OPTICS EXPRESS 2018; 9:952-961. [PMID: 29541496 PMCID: PMC5846541 DOI: 10.1364/boe.9.000952] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2017] [Revised: 12/13/2017] [Accepted: 12/13/2017] [Indexed: 05/18/2023]
Abstract
We present a swept-wavelength optical coherence tomography (OCT) system with a 19 MHz laser source and electronic phase-locking of the source, acquisition clock, and beam scanning mirrors. The laser is based on stretched-pulse active mode-locking using an electro-optic modulator. Beam scanning in the fast axis uses a resonant micro-electromechanical systems (MEMS) -based mirror at ~23.8 kHz. Acquisition is performed at 1.78 Gigasamples per second using an external fixed clock. Phase sensitive imaging without need for k-clocking, A-line triggers, or phase-calibration methods is demonstrated. The system was used to demonstrate inter-frame and inter-volume Doppler imaging in the mouse ear and brain at 4D acquisition rates of 1, 30, 60 and 100 volumes/sec (V-scans/s). Angiography based on inter-frame and inter-volume methods are presented. The platform offers extremely fast and phase-stable measurements that can be used in preclinical angiographic and Doppler investigations of perfusion dynamics.
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Affiliation(s)
- Serhat Tozburun
- Harvard Medical School, Boston, Massachusetts 02115, USA
- Wellman Center for Photomedicine, Massachusetts General Hospital, Boston, Massachusetts 02114, USA
- Izmir International Biomedicine and Genome Institute, Dokuz Eylul University, 35340 Balcova, Izmir, Turkey
| | - Cedric Blatter
- Harvard Medical School, Boston, Massachusetts 02115, USA
- Wellman Center for Photomedicine, Massachusetts General Hospital, Boston, Massachusetts 02114, USA
| | - Meena Siddiqui
- Wellman Center for Photomedicine, Massachusetts General Hospital, Boston, Massachusetts 02114, USA
- Harvard-MIT Division of Health Sciences and Technology, Cambridge, Massachusetts 02139, USA
| | - Eelco F. J. Meijer
- Harvard Medical School, Boston, Massachusetts 02115, USA
- Edwin L. Steele Laboratory for Tumor Biology, Massachusetts General Hospital, Boston, Massachusetts 02114, USA
| | - Benjamin J. Vakoc
- Harvard Medical School, Boston, Massachusetts 02115, USA
- Wellman Center for Photomedicine, Massachusetts General Hospital, Boston, Massachusetts 02114, USA
- Harvard-MIT Division of Health Sciences and Technology, Cambridge, Massachusetts 02139, USA
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16
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Li X, Liang S, Zhang J. Correction of saturation effects in endoscopic swept-source optical coherence tomography based on dual-channel detection. JOURNAL OF BIOMEDICAL OPTICS 2018; 23:1-3. [PMID: 29508563 DOI: 10.1117/1.jbo.23.3.030502] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2018] [Accepted: 02/14/2018] [Indexed: 06/08/2023]
Abstract
Saturation artifacts that are commonly observed in endoscopic swept-source optical coherence tomography (SSOCT) images cause image degradation and loss of image information. We present work on the correction of saturation effects in endoscopic SSOCT imaging. This method utilizes a broadband power divider with excellent pick-off flatness to divide the detected interference signal into the two channels of an analog-to-digital converter. Based on the precise calibration of the splitting ratio between the two channels, the maximum measurable signal power of the system was drastically increased by using the low level signal in one channel to correct the saturated signal in the other channel. The experimental results demonstrated that this technique can efficiently correct the saturation artifacts in endoscopic two- and three-dimensional SSOCT images in an accurate and cost-effective manner.
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Affiliation(s)
- Xinyu Li
- Sun Yat-sen University, School of Electronics and Information Technology, Guangzhou, China
| | - Shanshan Liang
- Sun Yat-sen University, School of Electronics and Information Technology, Guangzhou, China
| | - Jun Zhang
- Sun Yat-sen University, School of Electronics and Information Technology, Guangzhou, China
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17
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Xu J, Song S, Men S, Wang RK. Long ranging swept-source optical coherence tomography-based angiography outperforms its spectral-domain counterpart in imaging human skin microcirculations. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:1-11. [PMID: 29185292 PMCID: PMC5712670 DOI: 10.1117/1.jbo.22.11.116007] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Accepted: 11/08/2017] [Indexed: 05/07/2023]
Abstract
There is an increasing demand for imaging tools in clinical dermatology that can perform in vivo wide-field morphological and functional examination from surface to deep tissue regions at various skin sites of the human body. The conventional spectral-domain optical coherence tomography-based angiography (SD-OCTA) system is difficult to meet these requirements due to its fundamental limitations of the sensitivity roll-off, imaging range as well as imaging speed. To mitigate these issues, we demonstrate a swept-source OCTA (SS-OCTA) system by employing a swept source based on a vertical cavity surface-emitting laser. A series of comparisons between SS-OCTA and SD-OCTA are conducted. Benefiting from the high system sensitivity, long imaging range, and superior roll-off performance, the SS-OCTA system is demonstrated with better performance in imaging human skin than the SD-OCTA system. We show that the SS-OCTA permits remarkable deep visualization of both structure and vasculature (up to ∼2 mm penetration) with wide field of view capability (up to 18×18 mm2), enabling a more comprehensive assessment of the morphological features as well as functional blood vessel networks from the superficial epidermal to deep dermal layers. It is expected that the advantages of the SS-OCTA system will provide a ground for clinical translation, benefiting the existing dermatological practice.
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Affiliation(s)
- Jingjiang Xu
- University of Washington, Department of Bioengineering, Seattle, Washington, United States
| | - Shaozhen Song
- University of Washington, Department of Bioengineering, Seattle, Washington, United States
| | - Shaojie Men
- University of Washington, Department of Bioengineering, Seattle, Washington, United States
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18
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Barrick J, Doblas A, Gardner MR, Sears PR, Ostrowski LE, Oldenburg AL. High-speed and high-sensitivity parallel spectral-domain optical coherence tomography using a supercontinuum light source. OPTICS LETTERS 2016; 41:5620-5623. [PMID: 27973473 PMCID: PMC5235345 DOI: 10.1364/ol.41.005620] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The three most important metrics in optical coherence tomography (OCT) are resolution, speed, and sensitivity. Because there is a complex interplay between these metrics, no previous work has obtained the best performance in all three metrics simultaneously. We demonstrate that a high-power supercontinuum source, in combination with parallel spectral-domain OCT, achieves an unparalleled combination of resolution, speed, and sensitivity. This system captures cross-sectional images spanning 4 mm×0.5 mm at 1,024,000 lines/s with 2×14 μm resolution (axial×transverse) at a sensitivity of 113 dB. Imaging using the proposed system is demonstrated on highly differentiated human bronchial epithelial cells to capture and spatially localize ciliary dynamics.
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Lawman S, Dong Y, Williams BM, Romano V, Kaye S, Harding SP, Willoughby C, Shen YC, Zheng Y. High resolution corneal and single pulse imaging with line field spectral domain optical coherence tomography. OPTICS EXPRESS 2016; 24:12395-405. [PMID: 27410154 DOI: 10.1364/oe.24.012395] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
We report the development of a Spectral Domain Line Field Optical Coherence Tomography (LF-OCT) system, using a broad bandwidth and spatial coherent Super-Continuum (SC) source. With conventional quasi-Continuous Wave (CW) setup we achieve axial resolutions up to 2.1 μm in air and 3D volume imaging speeds up to 213 kA-Scan/s. Furthermore, we report the use of a single SC pulse, of 2 ns duration, to temporally gate an OCT B-Scan image of 70 A-Scans. This is the equivalent of 35 GA-Scans/s. We apply the CW setup for high resolution imaging of the fine structures of a human cornea sample ex-vivo. The single pulse setup is applied to imaging of a coated pharmaceutical tablet. The fixed pattern noise due to spectral noise is removed by subtracting the median magnitude A-Scan. We also demonstrate that the Fourier phase can be used to remove aberration caused artefacts.
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Wei X, Lau AKS, Xu Y, Tsia KK, Wong KKY. 28 MHz swept source at 1.0 μm for ultrafast quantitative phase imaging. BIOMEDICAL OPTICS EXPRESS 2015; 6:3855-64. [PMID: 26504636 PMCID: PMC4605045 DOI: 10.1364/boe.6.003855] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2015] [Revised: 08/18/2015] [Accepted: 08/31/2015] [Indexed: 05/04/2023]
Abstract
Emerging high-throughput optical imaging modalities, in particular those providing phase information, necessitate a demanding speed regime (e.g. megahertz sweep rate) for those conventional swept sources; while an effective solution is yet to be demonstrated. We demonstrate a stable breathing laser as inertia-free swept source (BLISS) operating at a wavelength sweep rate of 28 MHz, particularly for the ultrafast interferometric imaging modality at 1.0 μm. Leveraging a tunable dispersion compensation element inside the laser cavity, the wavelength sweep range of BLISS can be tuned from ~10 nm to ~63 nm. It exhibits a good intensity stability, which is quantified by the ratio of standard deviation to the mean of the pulse intensity, i.e. 1.6%. Its excellent wavelength repeatability, <0.05% per sweep, enables the single-shot imaging at an ultrafast line-scan rate without averaging. To showcase its potential applications, it is applied to the ultrafast (28-MHz line-scan rate) interferometric time-stretch (iTS) microscope to provide quantitative morphological information on a biological specimen at a lateral resolution of 1.2 μm. This fiber-based inertia-free swept source is demonstrated to be robust and broadband, and can be applied to other established imaging modalities, such as optical coherence tomography (OCT), of which an axial resolution better than 12 μm can be achieved.
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