1
|
Meleppat RK, Valente D, Lee S, Jonnal RS, Doble N, Zawadzki RJ. On-axis full-field swept-source optical coherence tomography for murine retinal imaging. OPTICS LETTERS 2024; 49:4630-4633. [PMID: 39146121 DOI: 10.1364/ol.531116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Accepted: 07/19/2024] [Indexed: 08/17/2024]
Abstract
A full-field swept-source optical coherence tomography (FF-SS-OCT) for in vivo murine retinal imaging is demonstrated. The on-axis FF-SS-OCT system was built in a Mach-Zehnder interferometer configuration employing a tunable laser source with an adjustable sweep rate and sweep range in conjunction with a fast 2D-CMOS camera. A large field retinal (coherent) illumination was accomplished using an imaging interface comprised of a short-focal length imaging lens and a contact lens. The magnification between the camera and retina (spatial sampling) was appropriately chosen to record the microscopic structural features of the retina in the image. A pupil stop was employed in the detection path to reject unwanted backscattering from the mouse eye and other sources and limit aberrations distorting the retinal images. In vivo mouse retinal imaging was performed at a sweep rate of 150 Hz to acquire volumes unaffected by the system vibrations, which predominated at lower frequencies. Operating the FF-SS-OCT at this speed yielded an effective axial scan rate of 20 million A-scans/s and a field of view of 820 × 410 µm (24.12° × 12.06°). High-quality retinal B-scans and enface images of the retina were obtained with the SS-FF-OCT, revealing all major retinal layers and vascular plexuses.
Collapse
|
2
|
Iliescu DA, Ghita AC, Ilie LA, Voiculescu SE, Geamanu A, Ghita AM. Non-Neovascular Age-Related Macular Degeneration Assessment: Focus on Optical Coherence Tomography Biomarkers. Diagnostics (Basel) 2024; 14:764. [PMID: 38611677 PMCID: PMC11011935 DOI: 10.3390/diagnostics14070764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Revised: 03/27/2024] [Accepted: 03/31/2024] [Indexed: 04/14/2024] Open
Abstract
The imagistic evaluation of non-neovascular age-related macular degeneration (AMD) is crucial for diagnosis, monitoring progression, and guiding management of the disease. Dry AMD, characterized primarily by the presence of drusen and retinal pigment epithelium atrophy, requires detailed visualization of the retinal structure to assess its severity and progression. Several imaging modalities are pivotal in the evaluation of non-neovascular AMD, including optical coherence tomography, fundus autofluorescence, or color fundus photography. In the context of emerging therapies for geographic atrophy, like pegcetacoplan, it is critical to establish the baseline status of the disease, monitor the development and expansion of geographic atrophy, and to evaluate the retina's response to potential treatments in clinical trials. The present review, while initially providing a comprehensive description of the pathophysiology involved in AMD, aims to offer an overview of the imaging modalities employed in the evaluation of non-neovascular AMD. Special emphasis is placed on the assessment of progression biomarkers as discerned through optical coherence tomography. As the landscape of AMD treatment continues to evolve, advanced imaging techniques will remain at the forefront, enabling clinicians to offer the most effective and tailored treatments to their patients.
Collapse
Affiliation(s)
- Daniela Adriana Iliescu
- Department of Physiology, “Carol Davila” University of Medicine and Pharmacy, 8 Eroii Sanitari Bld., 050474 Bucharest, Romania; (S.E.V.); (A.M.G.)
- Ocularcare Ophthalmology Clinic, 128 Ion Mihalache Bld., 012244 Bucharest, Romania; (A.C.G.); (L.A.I.)
| | - Ana Cristina Ghita
- Ocularcare Ophthalmology Clinic, 128 Ion Mihalache Bld., 012244 Bucharest, Romania; (A.C.G.); (L.A.I.)
| | - Larisa Adriana Ilie
- Ocularcare Ophthalmology Clinic, 128 Ion Mihalache Bld., 012244 Bucharest, Romania; (A.C.G.); (L.A.I.)
| | - Suzana Elena Voiculescu
- Department of Physiology, “Carol Davila” University of Medicine and Pharmacy, 8 Eroii Sanitari Bld., 050474 Bucharest, Romania; (S.E.V.); (A.M.G.)
| | - Aida Geamanu
- Ophthalmology Department, Bucharest University Emergency Hospital, 169 Independence Street, 050098 Bucharest, Romania;
| | - Aurelian Mihai Ghita
- Department of Physiology, “Carol Davila” University of Medicine and Pharmacy, 8 Eroii Sanitari Bld., 050474 Bucharest, Romania; (S.E.V.); (A.M.G.)
- Ocularcare Ophthalmology Clinic, 128 Ion Mihalache Bld., 012244 Bucharest, Romania; (A.C.G.); (L.A.I.)
- Ophthalmology Department, Bucharest University Emergency Hospital, 169 Independence Street, 050098 Bucharest, Romania;
| |
Collapse
|
3
|
Minicucci F, Oikonomou FD, De Sanctis AA. Multifractal Analysis of Choroidal SDOCT Images in the Detection of Retinitis Pigmentosa. Tomography 2024; 10:480-492. [PMID: 38668395 PMCID: PMC11053729 DOI: 10.3390/tomography10040037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2024] [Revised: 03/24/2024] [Accepted: 03/27/2024] [Indexed: 04/29/2024] Open
Abstract
The aim of this paper is to investigate whether a multifractal analysis can be applied to study choroidal blood vessels and help ophthalmologists in the early diagnosis of retinitis pigmentosa (RP). In a case study, we used spectral domain optical coherence tomography (SDOCT), which is a noninvasive and highly sensitive imaging technique of the retina and choroid. The image of a choroidal branching pattern can be regarded as a multifractal. Therefore, we calculated the generalized Renyi point-centered dimensions, which are considered a measure of the inhomogeneity of data, to prove that it increases in patients with RP as compared to those in the control group.
Collapse
Affiliation(s)
- Francesca Minicucci
- Department of Life, Health and Environmental Sciences, University of L’Aquila, 67100 L’Aquila, Italy;
| | | | - Angela A. De Sanctis
- Department of Business Economics, University “G. D’Annunzio” of Chieti-Pescara, 65127 Pescara, Italy
| |
Collapse
|
4
|
Peng Z, Okaneya S, Bai H, Wu C, Liu B, Shiina T. Proposal of dental demineralization diagnosis with OCT echo based on multiscale entropy analysis. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2024; 21:4421-4439. [PMID: 38549334 DOI: 10.3934/mbe.2024195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/02/2024]
Abstract
Optical coherence tomography (OCT) has been widely used for the diagnosis of dental demineralization. Most methods rely on extracting optical features from OCT echoes for evaluation or diagnosis. However, due to the diversity of biological samples and the complexity of tissues, the separability and robustness of extracted optical features are inadequate, resulting in a low diagnostic efficiency. Given the widespread utilization of entropy analysis in examining signals from biological tissues, we introduce a dental demineralization diagnosis method using OCT echoes, employing multiscale entropy analysis. Three multiscale entropy analysis methods were used to extract features from the OCT one-dimensional echo signal of normal and demineralized teeth, and a probabilistic neural network (PNN) was used for dental demineralization diagnosis. By comparing diagnostic efficiency, diagnostic speed, and parameter optimization dependency, the multiscale dispersion entropy-PNN (MDE-PNN) method was found to have comprehensive advantages in dental demineralization diagnosis with a diagnostic efficiency of 0.9397. Compared with optical feature-based dental demineralization diagnosis methods, the entropy features-based analysis had better feature separability and higher diagnostic efficiency, and showed its potential in dental demineralization diagnosis with OCT.
Collapse
Affiliation(s)
- Ziqi Peng
- College of Mathematics and Physics, Hunan University of Arts and Science, Changde 415000, China
- Hunan Province Key Laboratory of Photoelectric Information Integration and Optical Manufacturing Technology, Changde 415000, China
| | | | - Hongzi Bai
- College of Mathematics and Physics, Hunan University of Arts and Science, Changde 415000, China
| | - Chuangxing Wu
- College of Mathematics and Physics, Hunan University of Arts and Science, Changde 415000, China
| | - Bei Liu
- College of Mathematics and Physics, Hunan University of Arts and Science, Changde 415000, China
- Hunan Province Key Laboratory of Photoelectric Information Integration and Optical Manufacturing Technology, Changde 415000, China
| | - Tatsuo Shiina
- Graduate School of Engineering, Chiba University, Chiba 2638522, Japan
| |
Collapse
|
5
|
Ding J, Kim TH, Ma G, Yao X. Intrinsic signal optoretinography of dark adaptation abnormality due to rod photoreceptor degeneration. Exp Biol Med (Maywood) 2024; 249:10024. [PMID: 38463390 PMCID: PMC10911128 DOI: 10.3389/ebm.2024.10024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Accepted: 01/04/2024] [Indexed: 03/12/2024] Open
Abstract
This research aims to investigate the potential of using intrinsic optical signal (IOS) optoretinography (ORG) to objectively detect dark adaptation (DA) abnormalities related to rod photoreceptor degeneration. Functional optical coherence tomography (OCT) was employed in both wild-type (WT) and retinal degeneration 10 (rd10) mice to conduct this assessment. Dynamic OCT measurements captured the changes in retinal thickness and reflectance from light-to-dark transition. Comparative analysis revealed significant IOS alterations within the outer retina. Specifically, a reduction in thickness from external limiting membrane (ELM) peak to retinal pigment epithelium (RPE) peak was observed (WT: 1.13 ± 0.69 µm, 30 min DA; rd10: 2.64 ± 0.86 µm, 30 min DA), as well as a decrease in the intensity of the inner segment ellipsoid zone (EZ) in 30 min DA compared to light adaptation (LA). The reduction of relative EZ intensity was notable in rd10 after 5 min DA and in WT after 15 min DA, with a distinguishable difference between rd10 and WT after 10 min DA. Furthermore, our findings indicated a significant decrease in the relative intensity of the hypo-reflective band between EZ and RPE in rd10 retinas during DA, which primarily corresponds to the outer segment (OS) region. In conclusion, the observed DA-IOS abnormalities, including changes in ELM-RPE thickness, EZ, and OS intensity, hold promise as differentiators between WT and rd10 mice before noticeable morphological abnormalities occur. These findings suggest the potential of this non-invasive imaging technique for the early detection of dysfunction in retinal photoreceptors.
Collapse
Affiliation(s)
- Jie Ding
- Department of Biomedical Engineering, University of Illinois Chicago, Chicago, IL, United States
| | - Tae-Hoon Kim
- Department of Biomedical Engineering, University of Illinois Chicago, Chicago, IL, United States
| | - Guangying Ma
- Department of Biomedical Engineering, University of Illinois Chicago, Chicago, IL, United States
| | - Xincheng Yao
- Department of Biomedical Engineering, University of Illinois Chicago, Chicago, IL, United States
- Department of Ophthalmology and Visual Sciences, University of Illinois Chicago, Chicago, IL, United States
| |
Collapse
|
6
|
Kumar A, Pandey SK, Varshney N, Singh KU, Singh T, Shah MA. Distinctive approach in brain tumor detection and feature extraction using biologically inspired DWT method and SVM. Sci Rep 2023; 13:22735. [PMID: 38123666 PMCID: PMC10733354 DOI: 10.1038/s41598-023-50073-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 12/14/2023] [Indexed: 12/23/2023] Open
Abstract
Brain tumors result from uncontrolled cell growth, potentially leading to fatal consequences if left untreated. While significant efforts have been made with some promising results, the segmentation and classification of brain tumors remain challenging due to their diverse locations, shapes, and sizes. In this study, we employ a combination of Discrete Wavelet Transform (DWT) and Principal Component Analysis (PCA) to enhance performance and streamline the medical image segmentation process. Proposed method using Otsu's segmentation method followed by PCA to identify the most informative features. Leveraging the grey-level co-occurrence matrix, we extract numerous valuable texture features. Subsequently, we apply a Support Vector Machine (SVM) with various kernels for classification. We evaluate the proposed method's performance using metrics such as accuracy, sensitivity, specificity, and the Dice Similarity Index coefficient. The experimental results validate the effectiveness of our approach, with recall rates of 86.9%, precision of 95.2%, F-measure of 90.9%, and overall accuracy. Simulation of the results shows improvements in both quality and accuracy compared to existing techniques. In results section, experimental Dice Similarity Index coefficient of 0.82 indicates a strong overlap between the machine-extracted tumor region and the manually delineated tumor region.
Collapse
Affiliation(s)
- Ankit Kumar
- Department of Information Technology, Guru Ghasidas Vishwavidyalaya, Bilaspur, India
| | - Saroj Kumar Pandey
- Department of Computer Engineering & Applications, GLA University, Mathura, Uttar Pradesh, India
| | - Neeraj Varshney
- Department of Computer Engineering & Applications, GLA University, Mathura, Uttar Pradesh, India
| | - Kamred Udham Singh
- School of Computer Science and Engineering, Graphic Hill Era University, Dehradun, 248002, India
| | - Teekam Singh
- Department of Computer Science and Engineering, Graphic Era Deemed to be University, Dehradun, 248002, India
| | - Mohd Asif Shah
- Kebri Dehar University, Kebri Dehar, Somali, 250, Ethiopia.
- Centre of Research Impact and Outcome, Chitkara University Institute of Engineering and Technology, Chitkara University, Rajpura, 140401, Punjab, India.
- Division of Research and Development, Lovely Professional University, Phagwara, Punjab, 144001, India.
| |
Collapse
|
7
|
Xu L, Ruddick WN, Bolch SN, Klingeborn M, Dyka FM, Kulkarni MM, Simpson CP, Beltran WA, Bowes Rickman C, Smith WC, Dinculescu A. Distinct Phenotypic Consequences of Pathogenic Mutants Associated with Late-Onset Retinal Degeneration. THE AMERICAN JOURNAL OF PATHOLOGY 2023; 193:1706-1720. [PMID: 36328299 PMCID: PMC10726427 DOI: 10.1016/j.ajpath.2022.10.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 09/23/2022] [Accepted: 10/11/2022] [Indexed: 11/09/2022]
Abstract
A pathologic feature of late-onset retinal degeneration caused by the S163R mutation in C1q-tumor necrosis factor-5 (C1QTNF5) is the presence of unusually thick deposits between the retinal pigmented epithelium (RPE) and the vascular choroid, considered a hallmark of this disease. Following its specific expression in mouse RPE, the S163R mutant exhibits a reversed polarized distribution relative to the apically secreted wild-type C1QTNF5, and forms widespread, prominent deposits that gradually increase in size with aging. The current study shows that S163R deposits expand to a considerable thickness through a progressive increase in the basolateral RPE membrane, substantially raising the total RPE height, and enabling their clear imaging as a distinct hyporeflective layer by noninvasive optical coherence tomography in advanced age animals. This phenotype bears a striking resemblance to ocular pathology previously documented in patients harboring the S163R mutation. Therefore, a similar viral vector-based gene delivery approach was used to also investigate the behavior of P188T and G216C, two novel pathogenic C1QTNF5 mutants recently reported in patients for which histopathologic data are lacking. Both mutants primarily impacted the RPE/photoreceptor interface and did not generate basal laminar deposits. Distinct distribution patterns and phenotypic consequences of C1QTNF5 mutants were observed in vivo, which suggested that multiple pathobiological mechanisms contribute to RPE dysfunction and vision loss in this disorder.
Collapse
Affiliation(s)
- Lei Xu
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida
| | - William N Ruddick
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida
| | - Susan N Bolch
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida
| | - Mikael Klingeborn
- McLaughlin Research Institute, Great Falls, Montana; Helen Wills Neuroscience Institute, Berkeley, California
| | - Frank M Dyka
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida
| | - Manoj M Kulkarni
- Division of Experimental Retinal Therapies, Department of Clinical Sciences and Advanced Medicine, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania
| | - Chiab P Simpson
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida
| | - William A Beltran
- Department of Ophthalmology, Duke University Medical Center, Durham, North Carolina
| | - Catherine Bowes Rickman
- Helen Wills Neuroscience Institute, Berkeley, California; Department of Cell Biology, Duke University Medical Center, Durham, North Carolina
| | - W Clay Smith
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida
| | - Astra Dinculescu
- Department of Ophthalmology, College of Medicine, University of Florida, Gainesville, Florida.
| |
Collapse
|
8
|
Li X, Cong J, Liu K, Wang P, Sun M, Wei B. Aberrant intrinsic functional brain topology in methamphetamine-dependent individuals after six-months of abstinence. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:19565-19583. [PMID: 38052615 DOI: 10.3934/mbe.2023867] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
Our aim was to explore the aberrant intrinsic functional topology in methamphetamine-dependent individuals after six months of abstinence using resting-state functional magnetic imaging (rs-fMRI). Eleven methamphetamines (MA) abstainers who have abstained for six months and eleven healthy controls (HC) were recruited for rs-fMRI examination. The graph theory and functional connectivity (FC) analysis were employed to investigate the aberrant intrinsic functional brain topology between the two groups at multiple levels. Compared with the HC group, the characteristic shortest path length ($ {L}_{p} $) showed a significant decrease at the global level, while the global efficiency ($ {E}_{glob} $) and local efficiency ($ {E}_{loc} $) showed an increase considerably. After FDR correction, we found significant group differences in nodal degree and nodal efficiency at the regional level in the ventral attentional network (VAN), dorsal attentional network (DAN), somatosensory network (SMN), visual network (VN) and default mode network (DMN). In addition, the NBS method presented the aberrations in edge-based FC, including frontoparietal network (FPN), subcortical network (SCN), VAN, DAN, SMN, VN and DMN. Moreover, the FC of large-scale functional brain networks revealed a decrease within the VN and SCN and between the networks. These findings suggest that some functions, e.g., visual processing skills, object recognition and memory, may not fully recover after six months of withdrawal. This leads to the possibility of relapse behavior when confronted with MA-related cues, which may contribute to explaining the relapse mechanism. We also provide an imaging basis for revealing the neural mechanism of MA-dependency after six months of abstinence.
Collapse
Affiliation(s)
- Xiang Li
- First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan 250355, China
- Center for Medical Artificial Intelligence, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
- Qingdao Academy of Chinese Medical Sciences, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
| | - Jinyu Cong
- Center for Medical Artificial Intelligence, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
- Qingdao Academy of Chinese Medical Sciences, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
| | - Kunmeng Liu
- Center for Medical Artificial Intelligence, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
- Qingdao Academy of Chinese Medical Sciences, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
| | - Pingping Wang
- Center for Medical Artificial Intelligence, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
- Qingdao Academy of Chinese Medical Sciences, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
| | - Min Sun
- Shandong Detoxification Monitoring and Treatment Institute, Zibo 255311, China
| | - Benzheng Wei
- Center for Medical Artificial Intelligence, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
- Qingdao Academy of Chinese Medical Sciences, Shandong University of Traditional Chinese Medicine, Qingdao 266112, China
| |
Collapse
|
9
|
Jiao J, Xiao X, Li Z. dm-GAN: Distributed multi-latent code inversion enhanced GAN for fast and accurate breast X-ray image automatic generation. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:19485-19503. [PMID: 38052611 DOI: 10.3934/mbe.2023863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
Breast cancer seriously threatens women's physical and mental health. Mammography is one of the most effective methods for breast cancer diagnosis via artificial intelligence algorithms to identify diverse breast masses. The popular intelligent diagnosis methods require a large amount of breast images for training. However, collecting and labeling many breast images manually is extremely time consuming and inefficient. In this paper, we propose a distributed multi-latent code inversion enhanced Generative Adversarial Network (dm-GAN) for fast, accurate and automatic breast image generation. The proposed dm-GAN takes advantage of the generator and discriminator of the GAN framework to achieve automatic image generation. The new generator in dm-GAN adopts a multi-latent code inverse mapping method to simplify the data fitting process of GAN generation and improve the accuracy of image generation, while a multi-discriminator structure is used to enhance the discrimination accuracy. The experimental results show that the proposed dm-GAN can automatically generate breast images with higher accuracy, up to a higher 1.84 dB Peak Signal-to-Noise Ratio (PSNR) and lower 5.61% Fréchet Inception Distance (FID), as well as 1.38x faster generation than the state-of-the-art.
Collapse
Affiliation(s)
- Jiajia Jiao
- College of Information Engineering, Shanghai Maritime University, Shanghai 201306, China
| | - Xiao Xiao
- College of Information Engineering, Shanghai Maritime University, Shanghai 201306, China
| | - Zhiyu Li
- Department of Medical Imaging, Shanghai East Hospital, Tongji University School of Medicine, Shanghai 201306, China
| |
Collapse
|
10
|
Song H, Liu C, Li S, Zhang P. TS-GCN: A novel tumor segmentation method integrating transformer and GCN. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:18173-18190. [PMID: 38052553 DOI: 10.3934/mbe.2023807] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
As one of the critical branches of medical image processing, the task of segmentation of breast cancer tumors is of great importance for planning surgical interventions, radiotherapy and chemotherapy. Breast cancer tumor segmentation faces several challenges, including the inherent complexity and heterogeneity of breast tissue, the presence of various imaging artifacts and noise in medical images, low contrast between the tumor region and healthy tissue, and inconsistent size of the tumor region. Furthermore, the existing segmentation methods may not fully capture the rich spatial and contextual information in small-sized regions in breast images, leading to suboptimal performance. In this paper, we propose a novel breast tumor segmentation method, called the transformer and graph convolutional neural (TS-GCN) network, for medical imaging analysis. Specifically, we designed a feature aggregation network to fuse the features extracted from the transformer, GCN and convolutional neural network (CNN) networks. The CNN extract network is designed for the image's local deep feature, and the transformer and GCN networks can better capture the spatial and context dependencies among pixels in images. By leveraging the strengths of three feature extraction networks, our method achieved superior segmentation performance on the BUSI dataset and dataset B. The TS-GCN showed the best performance on several indexes, with Acc of 0.9373, Dice of 0.9058, IoU of 0.7634, F1 score of 0.9338, and AUC of 0.9692, which outperforms other state-of-the-art methods. The research of this segmentation method provides a promising future for medical image analysis and diagnosis of other diseases.
Collapse
Affiliation(s)
- Haiyan Song
- The Second Affiliated Hospital of Shandong University of Traditional Chinese Medicine, Jinan, China
| | - Cuihong Liu
- Affiliated Eye Hospital of Shandong University of Traditional Chinese Medicine, Jinan, China
- School of Nursing, Shandong University of Traditional Chinese Medicine, Jinan, China
| | - Shengnan Li
- The Second Affiliated Hospital of Shandong University of Traditional Chinese Medicine, Jinan, China
| | - Peixiao Zhang
- The Second Affiliated Hospital of Shandong University of Traditional Chinese Medicine, Jinan, China
| |
Collapse
|
11
|
Bell BA, Kaul C, Dunaief JL, Hollyfield JG, Bonilha VL. A comparison of optophysiological biomarkers of photoreceptor stress and phototoxicity in BALB/cJ, B6 (Cg)-Tyrc-2J/J, and C57Bl/6J mouse strains. FRONTIERS IN OPHTHALMOLOGY 2023; 3:1128311. [PMID: 38689597 PMCID: PMC11057998 DOI: 10.3389/fopht.2023.1128311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
Ophthalmic imaging instruments, including the confocal scanning laser ophthalmoscope and spectral-domain optical coherence tomography system, originally intended for revealing ocular microstructures in the human eye, have been deployed by vision researchers to evaluate the eyes of numerous small and large animal species for more than two decades. In this study, we have used these two instruments to obtain imaging data sequentially from the retinas of three prominent, widely used experimental mouse models to document changes induced by two contrasting vivarium lighting conditions. Mice studied include albino BALB/cJ and B6(Cg)-Tyrc-2J/J and pigmented C57Bl/6J. Mice were reared under dim light conditions until ~8 weeks of age where they underwent baseline imaging. Following, mice were returned to the dim vivarium or relocated to the top rack cage position in a standard vivarium. Mice were then followed for several months by ocular imaging to catalog the retinal dynamics as a function of long-term dim vs. elevated, standard vivarium lighting exposure levels. Upon exposure to elevated light levels, B6(Cg)-Tyrc-2J/J underwent similar changes as BALB/cJ in regard to photoreceptor outer segment shortening, photoreceptor layer proximal aspect hyperreflective changes, and the development of retinal infoldings and autofluorescent sub-retinal inflammatory monocyte infiltrate. Noteworthy, however, is that infoldings and infiltrate occurred at a slower rate of progression in B6(Cg)-Tyrc-2J/J vs. BALB/cJ. The photoreceptor outer nuclear layer thickness of BALB/cJ degenerated steadily following elevated light onset. In contrast, B6(Cg)-Tyrc-2J/J degeneration was unremarkable for many weeks before experiencing a noticeable change in the rate of degeneration that was concomitant with a plateau and decreasing trend in number of retinal infoldings and monocyte infiltrate. Pathological changes in C57Bl/6J mice were unremarkable for all imaging biomarkers assessed with exception to autofluorescent sub-retinal inflammatory monocyte infiltrate, which showed significant accumulation in dim vs. elevated light exposed mice following ~1 year of observation. These data were evaluated using Spearman's correlation and Predictive Power Score matrices to determine the best imaging optophysiological biomarkers for indicating vivarium light stress and light-induced photoreceptor degeneration. This study suggests that changes in proximal aspect hyperreflectivity, outer segment shortening, retinal infoldings and autofluorescent sub-retinal inflammatory monocyte infiltrate are excellent indicators of light stress and light-induced degeneration in albino B6(Cg)-Tyrc-2J/J and BALB/cJ mouse strains.
Collapse
Affiliation(s)
- Brent A. Bell
- Scheie Eye Institute and Department of Ophthalmology, University of Pennsylvania, Philadelphia, PA, United States
- Cole Eye Institute/Ophthalmic Research, Cleveland Clinic, Cleveland, OH, United States
| | - Charles Kaul
- Cole Eye Institute/Ophthalmic Research, Cleveland Clinic, Cleveland, OH, United States
| | - Joshua L. Dunaief
- Scheie Eye Institute and Department of Ophthalmology, University of Pennsylvania, Philadelphia, PA, United States
| | - Joe G. Hollyfield
- Cole Eye Institute/Ophthalmic Research, Cleveland Clinic, Cleveland, OH, United States
- Cleveland Clinic Lerner College of Medicine, Case Western Reserve University, Cleveland, OH, United States
| | - Vera L. Bonilha
- Cole Eye Institute/Ophthalmic Research, Cleveland Clinic, Cleveland, OH, United States
- Cleveland Clinic Lerner College of Medicine, Case Western Reserve University, Cleveland, OH, United States
| |
Collapse
|
12
|
Chen H, Xu S, Zhang Y, Chen P. Systematic analysis of lncRNA gene characteristics based on PD-1 immune related pathway for the prediction of non-small cell lung cancer prognosis. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2023; 20:9818-9838. [PMID: 37322912 DOI: 10.3934/mbe.2023430] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
BACKGROUND Non-small cell lung cancer (NSCLC) is heterogeneous. Molecular subtyping based on the gene expression profiles is an effective technique for diagnosing and determining the prognosis of NSCLC patients. METHODS Here, we downloaded the NSCLC expression profiles from The Cancer Genome Atlas and the Gene Expression Omnibus databases. ConsensusClusterPlus was used to derive the molecular subtypes based on long-chain noncoding RNA (lncRNA) associated with the PD-1-related pathway. The LIMMA package and least absolute shrinkage and selection operator (LASSO)-Cox analysis were used to construct the prognostic risk model. The nomogram was constructed to predict the clinical outcomes, followed by decision curve analysis (DCA) to validate the reliability of this nomogram. RESULTS We discovered that PD-1 was strongly and positively linked to the T-cell receptor signaling pathway. Furthermore, we identified two NSCLC molecular subtypes yielding a significantly distinctive prognosis. Subsequently, we developed and validated the 13-lncRNA-based prognostic risk model in the four datasets with high AUC values. Patients with low-risk showed a better survival rate and were more sensitive to PD-1 treatment. Nomogram construction combined with DCA revealed that the risk score model could accurately predict the prognosis of NSCLC patients. CONCLUSIONS This study demonstrated that lncRNAs engaged in the T-cell receptor signaling pathway played a significant role in the onset and development of NSCLC, and that they could influence the sensitivity to PD-1 treatment. In addition, the 13 lncRNA model was effective in assisting clinical treatment decision-making and prognosis evaluation.
Collapse
Affiliation(s)
- Hejian Chen
- Department of Respiratory and Critical Care Medicine, Zhuji People's Hospital of Zhejiang Province, Zhuji 311800, China
| | - Shuiyu Xu
- Department of Oncology, HaploX Biotechnology, Shenzhen 518035, China
| | - Yuhong Zhang
- Department of Oncology, HaploX Biotechnology, Shenzhen 518035, China
| | - Peifeng Chen
- Department of Respiratory and Critical Care Medicine, Zhuji People's Hospital of Zhejiang Province, Zhuji 311800, China
| |
Collapse
|
13
|
Lake SR, Bottema MJ, Lange T, Williams KA, Reynolds KJ. Swept-Source OCT Mid-Peripheral Retinal Irregularity in Retinal Detachment and Posterior Vitreous Detachment Eyes. Bioengineering (Basel) 2023; 10:bioengineering10030377. [PMID: 36978768 PMCID: PMC10044997 DOI: 10.3390/bioengineering10030377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 03/10/2023] [Accepted: 03/16/2023] [Indexed: 03/30/2023] Open
Abstract
Irregularities in retinal shape have been shown to correlate with axial length, a major risk factor for retinal detachment. To further investigate this association, a comparison was performed of the swept-source optical coherence tomography (SS OCT) peripheral retinal shape of eyes that had either a posterior vitreous detachment (PVD) or vitrectomy for retinal detachment. The objective was to identify a biomarker that can be tested as a predictor for retinal detachment. Eyes with a PVD (N = 88), treated retinal detachment (N = 67), or retinal tear (N = 53) were recruited between July 2020 and January 2022 from hospital retinal clinics in South Australia. The mid-peripheral retina was imaged in four quadrants with SS OCT. The features explored were patient age, eye axial length, and retinal shape irregularity quantified in the frequency domain. A discriminant analysis classifier to identify retinal detachment eyes was trained with two-thirds and tested with one-third of the sample. Retinal detachment eyes had greater irregularity than PVD eyes. A classifier trained using shape features from the superior and temporal retina had a specificity of 84% and a sensitivity of 48%. Models incorporating axial length were less successful, suggesting peripheral retinal irregularity is a better biomarker for retinal detachment than axial length. Mid-peripheral retinal irregularity can identify eyes that have experienced a retinal detachment.
Collapse
Affiliation(s)
- Stewart R Lake
- Flinders Institute for Health and Medical Research, GPO Box 2100, Adelaide 5001, Australia
- Medical Device Research Institute, College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Murk J Bottema
- Medical Device Research Institute, College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Tyra Lange
- Medical Device Research Institute, College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Keryn A Williams
- Flinders Institute for Health and Medical Research, GPO Box 2100, Adelaide 5001, Australia
| | - Karen J Reynolds
- Medical Device Research Institute, College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| |
Collapse
|
14
|
Al-Hawasi A, Lagali N, Fagerholm P, Huang-Link Y. Longitudinal Optical Coherence Tomography Measurement of Retinal Ganglion Cell and Nerve Fiber Layer to Assess Benign Course in Multiple Sclerosis. J Clin Med 2023; 12:jcm12062240. [PMID: 36983241 PMCID: PMC10054631 DOI: 10.3390/jcm12062240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Revised: 03/09/2023] [Accepted: 03/10/2023] [Indexed: 03/15/2023] Open
Abstract
A benign form of multiple sclerosis (BMS) is not easily diagnosed, but changes of the retinal ganglion cell layer-inner plexiform layer (GCL-IPL) and retinal nerve fiber layer (RNFL) may be sensitive to the disease. The aim of this study was to use optical coherence tomography (OCT) to investigate longitudinal changes of GCL-IPL and RNFL in BMS. Eighteen patients with BMS and 22 healthy control (HC) subjects were included, with a mean follow-up period of 32.1 months in BMS and 34.3 months in HC. Mean disease duration in BMS was 23.3 years, with 14 patients left untreated. Unilateral optic neuritis (ON) was found in eight patients. Non-ON eyes showed thinner GCL-IPL layer in the BMS group relative to HC (p < 0.001). The thinning rate of GCL-IPL in non-ON BMS, however, was −0.19 ± 0.15 µm/year vs. 0 ± 0.11 µm/year for HC (p = 0.573, age-adjusted). Thinning rate of RNFL in non-ON BMS was −0.2 ± 0.27 µm/year vs. −0.05 ± 0.3 µm/year for HC (p = 0.454, age adjusted). Conclusions: Thinning rate of the GCL-IPL and RNFL in BMS is similar to the healthy population but differs from the thinning rate in relapsing-remitting MS, presenting a non-invasive OCT-based criterion for assessing a benign course in multiple sclerosis.
Collapse
Affiliation(s)
- Abbas Al-Hawasi
- Division of Ophthalmology, Department of Biomedical and Clinical Sciences, Faculty of Medicine, Linköping University, 581 83 Linköping, Sweden
- Correspondence:
| | - Neil Lagali
- Division of Ophthalmology, Department of Biomedical and Clinical Sciences, Faculty of Medicine, Linköping University, 581 83 Linköping, Sweden
| | - Per Fagerholm
- Division of Ophthalmology, Department of Biomedical and Clinical Sciences, Faculty of Medicine, Linköping University, 581 83 Linköping, Sweden
| | - Yumin Huang-Link
- Division of Neurology, Department of Biomedical and Clinical Sciences, Linköping University, 581 85 Linköping, Sweden
| |
Collapse
|
15
|
Chen S, Abu-Qamar O, Kar D, Messinger JD, Hwang Y, Moult EM, Lin J, Baumal CR, Witkin A, Liang MC, Waheed NK, Curcio CA, Fujimoto JG. Ultrahigh resolution optical coherence tomography markers of normal aging and early age-related macular degeneration. OPHTHALMOLOGY SCIENCE 2023; 3:100277. [PMID: 36970115 PMCID: PMC10034509 DOI: 10.1016/j.xops.2023.100277] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 01/04/2023] [Accepted: 01/26/2023] [Indexed: 02/04/2023]
Abstract
Purpose Ultrahigh resolution spectral domain-OCT (UHR SD-OCT) enables in vivo visualization of micrometric structural markers which differentially associate with normal aging versus age-related macular degeneration (AMD). This study explores the hypothesis that UHR SD-OCT can detect and quantify sub-retinal pigment epithelium (RPE) deposits in early AMD, separating AMD pathology from normal aging. Design Prospective cross-sectional study. Participants A total of 53 nonexudative (dry) AMD eyes from 39 patients, and 63 normal eyes from 39 subjects. Methods Clinical UHR SD-OCT scans were performed using a high-density protocol. Exemplary high-resolution histology and transmission electron microscopy images were obtained from archive donor eyes. Three trained readers evaluated and labeled outer retina morphological features, including the appearance of a hyporeflective split within the RPE-RPE basal lamina (RPE-BL)-Bruch's membrane (BrM) complex on UHR brightness (B)-scans. A semi-automatic segmentation algorithm measured the thickness of the RPE-BL-BrM split/hyporeflective band. Main Outcome Measures Qualitative description of outer retinal morphological changes on UHR SD-OCT B-scans; the proportion of the RPE-BL-BrM complex with visible split (%) and the thickness of the resulting hyporeflective band (μm). Results In young normal eyes, UHR SD-OCT consistently revealed an RPE-BL-BrM split/hyporeflective band. Its visibility and thickness were less in eyes of advanced age. However, the split/hyporeflective band was again visible in early AMD eyes. Both qualitative reading and quantitative thickness measurements showed significantly elevated visibility and thickness of the RPE-BL-BrM split/hyporeflective in early AMD eyes compared to age-matched controls. Conclusions Our imaging results strongly support the hypothesis that appearance of the RPE-BL-BrM split/hyporeflective band in older subjects is dominated by the BL deposit, an indicator of early AMD well known from histology. Ultrahigh resolution SD-OCT can be used to investigate physiological aging as well as early AMD pathology in clinical imaging studies. Developing quantifiable markers associated with disease pathogenesis and progression can facilitate drug discovery, as well as reduce clinical trial times. Financial Disclosures Proprietary or commercial disclosure may be found after the references.
Collapse
|
16
|
Analysis of Retinal Microstructure in Eyes with Dissociated Optic Nerve Fiber Layer (DONFL) Appearance following Idiopathic Macular Hole Surgery: An Optical Coherence Tomography Study. J Pers Med 2023; 13:jpm13020255. [PMID: 36836488 PMCID: PMC9963747 DOI: 10.3390/jpm13020255] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Revised: 01/21/2023] [Accepted: 01/28/2023] [Indexed: 01/31/2023] Open
Abstract
(1) Purpose: This study aimed to evaluate morphological changes of the retina in eyes with dissociated optic nerve fiber layer (DONFL) appearance following internal limiting membrane (ILM) peeling for full-thickness idiopathic macular hole (IMH) on spectral-domain optical coherence tomography (SD-OCT). (2) Methods: We retrospectively analyzed 39 eyes of 39 patients with type 1 macular hole closure after a vitrectomy with ILM peeling procedure at a six-month minimum postoperative follow-up. The retinal thickness maps and cross-sectional OCT images were obtained from a clinical OCT device. The cross-sectional area of the retinal nerve fiber layer (RNFL) on cross-sectional OCT images was manually measured by ImageJ software. (3) Results: The inner retinal layers (IRLs) thickness thinned down much more in the temporal quadrant than in nasal quadrants at 2 and 6 months postoperatively (p < 0.001). However, the cross-sectional area of the RNFL did not change significantly at 2 and 6 months postoperatively (p > 0.05) when compared to preoperative data. In addition, the thinning of the IRL did not correlate with the best-corrected visual acuity (BCVA) at 6 months postoperatively. (4) Conclusions: The thickness of the IRL decreased in eyes with a DONFL appearance after ILM peeling for IMH. The thickness of the IRL decreased more in the temporal retina than in the nasal retina, but the change did not affect BCVA during the 6 months after surgery.
Collapse
|
17
|
Arrigo A, Aragona E, Battaglia Parodi M, Bandello F. Quantitative approaches in multimodal fundus imaging: State of the art and future perspectives. Prog Retin Eye Res 2023; 92:101111. [PMID: 35933313 DOI: 10.1016/j.preteyeres.2022.101111] [Citation(s) in RCA: 14] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Revised: 07/16/2022] [Accepted: 07/19/2022] [Indexed: 02/01/2023]
Abstract
When it first appeared, multimodal fundus imaging revolutionized the diagnostic workup and provided extremely useful new insights into the pathogenesis of fundus diseases. The recent addition of quantitative approaches has further expanded the amount of information that can be obtained. In spite of the growing interest in advanced quantitative metrics, the scientific community has not reached a stable consensus on repeatable, standardized quantitative techniques to process and analyze the images. Furthermore, imaging artifacts may considerably affect the processing and interpretation of quantitative data, potentially affecting their reliability. The aim of this survey is to provide a comprehensive summary of the main multimodal imaging techniques, covering their limitations as well as their strengths. We also offer a thorough analysis of current quantitative imaging metrics, looking into their technical features, limitations, and interpretation. In addition, we describe the main imaging artifacts and their potential impact on imaging quality and reliability. The prospect of increasing reliance on artificial intelligence-based analyses suggests there is a need to develop more sophisticated quantitative metrics and to improve imaging technologies, incorporating clear, standardized, post-processing procedures. These measures are becoming urgent if these analyses are to cross the threshold from a research context to real-life clinical practice.
Collapse
Affiliation(s)
- Alessandro Arrigo
- Department of Ophthalmology, IRCCS San Raffaele Scientific Institute, via Olgettina 60, 20132, Milan, Italy.
| | - Emanuela Aragona
- Department of Ophthalmology, IRCCS San Raffaele Scientific Institute, via Olgettina 60, 20132, Milan, Italy
| | - Maurizio Battaglia Parodi
- Department of Ophthalmology, IRCCS San Raffaele Scientific Institute, via Olgettina 60, 20132, Milan, Italy
| | - Francesco Bandello
- Department of Ophthalmology, IRCCS San Raffaele Scientific Institute, via Olgettina 60, 20132, Milan, Italy
| |
Collapse
|
18
|
Mota-Rojas D, Pereira AMF, Martínez-Burnes J, Domínguez-Oliva A, Mora-Medina P, Casas-Alvarado A, Rios-Sandoval J, de Mira Geraldo A, Wang D. Thermal Imaging to Assess the Health Status in Wildlife Animals under Human Care: Limitations and Perspectives. Animals (Basel) 2022; 12:3558. [PMID: 36552478 PMCID: PMC9774956 DOI: 10.3390/ani12243558] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Revised: 12/07/2022] [Accepted: 12/12/2022] [Indexed: 12/23/2022] Open
Abstract
Promoting animal welfare in wildlife species under human care requires the implementation of techniques for continuously monitoring their health. Infrared thermography is a non-invasive tool that uses the radiation emitted from the skin of animals to assess their thermal state. However, there are no established thermal windows in wildlife species because factors such as the thickness or color of the skin, type/length of coat, or presence of fur can influence the readings taken to obtain objective, sensitive values. Therefore, this review aims to discuss the usefulness and application of the ocular, nasal, thoracic, abdominal, and podal anatomical regions as thermal windows for evaluating zoo animals' thermal response and health status. A literature search of the Web of Science, Science Direct, and PubMed databases was performed to identify relevant studies that used IRT with wild species as a complementary diagnostic tool. Implementing IRT in zoos or conservation centers could also serve as a method for determining and monitoring optimal habitat designs to meet the needs of specific animals. In addition, we analyze the limitations of using IRT with various wildlife species under human care to understand better the differences among animals and the factors that must be considered when using infrared thermography.
Collapse
Affiliation(s)
- Daniel Mota-Rojas
- Neurophysiology, Behavior and Animal Welfare Assessment, Department of Agricultural and Animal Production, Universidad Autónoma Metropolitana (UAM) Unidad Xochimilco, Mexico City 04960, Mexico
| | - Alfredo M. F. Pereira
- Mediterranean Institute for Agriculture, Environment and Development (MED), Institute for Advanced Studies and Research, Universidade de Évora, 7006-554 Évora, Portugal
| | - Julio Martínez-Burnes
- Facultad de Medicina Veterinaria y Zootecnia, Universidad Autónoma de Tamaulipas, Victoria City 87000, Mexico
| | - Adriana Domínguez-Oliva
- Neurophysiology, Behavior and Animal Welfare Assessment, Department of Agricultural and Animal Production, Universidad Autónoma Metropolitana (UAM) Unidad Xochimilco, Mexico City 04960, Mexico
| | - Patricia Mora-Medina
- Facultad de Estudios Superiores Cuautitlán, Universidad Nacional Autónoma de México (UNAM), Cuautitlan Izcalli 54714, Mexico
| | - Alejandro Casas-Alvarado
- Neurophysiology, Behavior and Animal Welfare Assessment, Department of Agricultural and Animal Production, Universidad Autónoma Metropolitana (UAM) Unidad Xochimilco, Mexico City 04960, Mexico
| | - Jennifer Rios-Sandoval
- Neurophysiology, Behavior and Animal Welfare Assessment, Department of Agricultural and Animal Production, Universidad Autónoma Metropolitana (UAM) Unidad Xochimilco, Mexico City 04960, Mexico
| | - Ana de Mira Geraldo
- Mediterranean Institute for Agriculture, Environment and Development (MED), Institute for Advanced Studies and Research, Universidade de Évora, 7006-554 Évora, Portugal
| | - Dehua Wang
- School of Life Sciences, Shandong University, Qingdao 266237, China
| |
Collapse
|
19
|
Meleppat RK, Fortenbach CR, Jian Y, Martinez ES, Wagner K, Modjtahedi BS, Motta MJ, Ramamurthy DL, Schwab IR, Zawadzki RJ. In Vivo Imaging of Retinal and Choroidal Morphology and Vascular Plexuses of Vertebrates Using Swept-Source Optical Coherence Tomography. Transl Vis Sci Technol 2022; 11:11. [PMID: 35972433 PMCID: PMC9396679 DOI: 10.1167/tvst.11.8.11] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Purpose To perform in vivo evaluation of the structural morphology and vascular plexuses of the neurosensory retina and choroid across vertebrate species using swept-source optical coherence tomography (SS-OCT) and SS-OCT angiography (SS-OCTA) imaging. Methods A custom-built SS-OCT system with an incorporated flexible imaging arm was used to acquire the three-dimensional (3D) retinal OCT and vascular OCTA data of five different vertebrates: a mouse (C57BL/6J), a rat (Long Evans), a gray short-tailed opossum (Monodelphis domestica), a white sturgeon (Acipenser transmontanus), and a great horned owl (Bubo virginianus). Results In vivo structural morphology of the retina and choroid, as well as en face OCTA images of retinal and choroidal vasculature of all species were generated. The retinal morphology and vascular plexuses were similar between rat and mouse, whereas distinct choroidal and paired superficial vessels were observed in the opossum retina. The retinal and vascular structure of the sturgeon, as well as the pecten oculi and overlying the avascular and choroidal vasculature in the owl retina are reported in vivo. Conclusions A high-quality two-dimensional and 3D in vivo visualization of the retinal structures and en face visualization of the retina and choroidal vascular plexus of vertebrates was possible. Our studies affirm that SS-OCT and SS-OCTA are viable methods for evaluating the in vivo retinal and choroidal structure across terrestrial, aquatic, and aerial vertebrates. Translational Relevance In vivo characterization of retinal morphology and vasculature plexus of multiple species using SS-OCT and SS-OCTA imaging can increase the pool of species available as models of human retinal diseases.
Collapse
Affiliation(s)
- Ratheesh K Meleppat
- UC Davis Eyepod Imaging Laboratory, University of California Davis, Davis, CA, USA.,Department of Ophthalmology & Vision Science, University of California Davis, Sacramento, CA, USA
| | - Christopher R Fortenbach
- Center for Neuroscience, University of California, Davis, Davis, CA, USA.,Department of Ophthalmology and Visual Sciences, Carver College of Medicine, University of Iowa, Iowa City, IA, USA
| | - Yifan Jian
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Esteban Soto Martinez
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University of California Davis, Davis, CA, USA
| | - Karen Wagner
- Department of Entomology and UC Davis Comprehensive Cancer Center, University of California Davis, Sacramento, CA, USA
| | - Bobeck S Modjtahedi
- Department of Research and Evaluation, Southern California Permanente Medical Group, Pasadena, CA, USA.,Department of Clinical Science, Kaiser Permanente Bernard J. Tyson School of Medicine, Pasadena, CA, USA
| | - Monica J Motta
- Department of Surgical and Radiological Sciences, School of Veterinary Medicine, University of California, Davis, CA, USA
| | - Deepa L Ramamurthy
- Center for Neuroscience, University of California, Davis, Davis, CA, USA
| | - Ivan R Schwab
- Department of Ophthalmology & Vision Science, University of California Davis, Sacramento, CA, USA
| | - Robert J Zawadzki
- UC Davis Eyepod Imaging Laboratory, University of California Davis, Davis, CA, USA.,Department of Ophthalmology & Vision Science, University of California Davis, Sacramento, CA, USA
| |
Collapse
|
20
|
Filippelli M, Campagna G, Ciampa N, Fioretto G, Giannini R, Marino PF, dell’Omo R, Costagliola C. Ocular Tolerability of Bimatoprost 0.1 mg/mL Preservative-Free versus Bimatoprost 0.1 mg/mL with Benzalkonium Chloride or Bimatoprost 0.3 mg/mL Preservative-Free in Patients with Primary Open-Angle Glaucoma. J Clin Med 2022; 11:jcm11123518. [PMID: 35743588 PMCID: PMC9224644 DOI: 10.3390/jcm11123518] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Revised: 06/14/2022] [Accepted: 06/17/2022] [Indexed: 12/21/2022] Open
Abstract
This study aimed to evaluate whether the therapeutic switch from a formulation of Bimatoprost 0.1 mg/mL with benzalkonium chloride (BAK) or Bimatoprost 0.3 mg/mL preservative-free to a formulation of Bimatoprost 0.1 mg/mL preservative-free could improve eye surface conditions in patients with glaucoma; intraocular pressure (IOP) was also evaluated. All patients meeting the inclusion criteria were eligible for the therapeutic switch to Bimatoprost 0.1 mg/mL preservative-free. At each check visit, enrolled patients underwent a break-up time (BUT) test, an ocular surface disease index (OSDI) test, and a three-point tonometric curve. A total of 40 patients were enrolled (23 were in therapy with Bimatoprost 0.1 mg/mL with BAK and 17 with Bimatoprost 0.3 mg/mL preservative-free). Significant differences of OSDI and BUT between Bimatoprost 0.1 mg/mL with BAK at baseline vs. Bimatoprost 0.1 mg/mL preservative-free at 14 and 28 days (p < 0.0001 and p = 0.0003, respectively) were recorded. Similarly, significant differences of OSDI and BUT between Bimatoprost 0.3 mg/mL preservative-free at baseline vs. Bimatoprost 0.1 mg/mL preservative-free at 14 and 28 days (p < 0.0001 for both) were found. Bimatoprost 0.1 mg/mL preservative-free has a better tolerability profile associated with non-therapeutical inferiority in the control of IOP compared to the other Bimatoprost formulations.
Collapse
Affiliation(s)
- Mariaelena Filippelli
- Department of Medicine and Health Sciences, “V. Tiberio”, University of Molise, 86100 Campobasso, Italy; (R.d.); (C.C.)
- Correspondence:
| | - Giuseppe Campagna
- Department of Medical-Surgical Sciences and Translational Medicine, University of Rome “Sapienza”, 00185 Rome, Italy;
| | - Nicola Ciampa
- Department of Neurosciences, Reproductive Sciences and Dentistry, University of Naples Federico II, 80138 Naples, Italy; (N.C.); (G.F.); (P.F.M.)
| | - Gaetano Fioretto
- Department of Neurosciences, Reproductive Sciences and Dentistry, University of Naples Federico II, 80138 Naples, Italy; (N.C.); (G.F.); (P.F.M.)
| | - Roberta Giannini
- Department of Ophthalmology, San Camillo Hospital, 00152 Rome, Italy;
| | - Pier Franco Marino
- Department of Neurosciences, Reproductive Sciences and Dentistry, University of Naples Federico II, 80138 Naples, Italy; (N.C.); (G.F.); (P.F.M.)
| | - Roberto dell’Omo
- Department of Medicine and Health Sciences, “V. Tiberio”, University of Molise, 86100 Campobasso, Italy; (R.d.); (C.C.)
| | - Ciro Costagliola
- Department of Medicine and Health Sciences, “V. Tiberio”, University of Molise, 86100 Campobasso, Italy; (R.d.); (C.C.)
- Department of Neurosciences, Reproductive Sciences and Dentistry, University of Naples Federico II, 80138 Naples, Italy; (N.C.); (G.F.); (P.F.M.)
| |
Collapse
|
21
|
Marsh-Armstrong B, Murrell KS, Valente D, Jonnal RS. Using directional OCT to analyze photoreceptor visibility over AMD-related drusen. Sci Rep 2022; 12:9763. [PMID: 35697705 PMCID: PMC9192709 DOI: 10.1038/s41598-022-13106-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Accepted: 05/20/2022] [Indexed: 02/03/2023] Open
Abstract
Investigators have reported reduced visibility of the cone photoreceptors overlying drusen using adaptive optics (AO) imaging techniques. Two hypotheses have been proposed to explain this phenomenon. First, the disease-related deformation of the photoreceptor outer segment (OS) may reduce its ability to act as a wave guide, thus decreasing the cell's familiar reflectance pattern. Second, drusen could disorient the photoreceptors away from the eye's pupil, reducing the amount of light reflected back out the pupil. In this work, we use directional OCT (dOCT) images of drusen in AMD patients to measure the respective contributions of these deforming and disorienting factors.
Collapse
Affiliation(s)
| | - Kelly S. Murrell
- grid.27860.3b0000 0004 1936 9684University of California, Davis Eye Center, Sacramento, USA
| | - Denise Valente
- grid.27860.3b0000 0004 1936 9684University of California, Davis Eye Center, Sacramento, USA
| | - Ravi S. Jonnal
- grid.27860.3b0000 0004 1936 9684University of California, Davis Eye Center, Sacramento, USA
| |
Collapse
|
22
|
Oliveira RG, Correia PMM, Silva ALM, Encarnação PMCC, Ribeiro FM, Castro IF, Veloso JFCA. Development of a New Integrated System for Vital Sign Monitoring in Small Animals. SENSORS 2022; 22:s22114264. [PMID: 35684885 PMCID: PMC9185494 DOI: 10.3390/s22114264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 05/22/2022] [Accepted: 06/01/2022] [Indexed: 01/25/2023]
Abstract
Monitoring the vital signs of mice is an essential practice during imaging procedures to avoid populational losses and improve image quality. For this purpose, a system based on a set of devices (piezoelectric sensor, optical module and thermistor) able to detect the heart rate, respiratory rate, body temperature and arterial blood oxygen saturation (SpO2) in mice anesthetized with sevoflurane was implemented. Results were validated by comparison with the reported literature on similar anesthetics. A new non-invasive electrocardiogram (ECG) module was developed, and its first results reflect the viability of its integration in the system. The sensors were strategically positioned on mice, and the signals were acquired through a custom-made printed circuit board during imaging procedures with a micro-PET (Positron Emission Tomography). For sevoflurane concentration of 1.5%, the average values obtained were: 388 bpm (beats/minute), 124 rpm (respirations/minute) and 88.9% for the heart rate, respiratory rate and SpO2, respectively. From the ECG information, the value obtained for the heart rate was around 352 bpm for injectable anesthesia. The results compare favorably to the ones established in the literature, proving the reliability of the proposed system. The ECG measurements show its potential for mice heart monitoring during imaging acquisitions and thus for integration into the developed system.
Collapse
Affiliation(s)
- Regina G. Oliveira
- Institute for Nanostructures, Nanomodelling and Nanofabrication (i3N), Physics Department, University of Aveiro, 3810-193 Aveiro, Portugal; (R.G.O.); (A.L.M.S.); (P.M.C.C.E.); (F.M.R.); (J.F.C.A.V.)
| | - Pedro M. M. Correia
- Institute for Nanostructures, Nanomodelling and Nanofabrication (i3N), Physics Department, University of Aveiro, 3810-193 Aveiro, Portugal; (R.G.O.); (A.L.M.S.); (P.M.C.C.E.); (F.M.R.); (J.F.C.A.V.)
- Correspondence:
| | - Ana L. M. Silva
- Institute for Nanostructures, Nanomodelling and Nanofabrication (i3N), Physics Department, University of Aveiro, 3810-193 Aveiro, Portugal; (R.G.O.); (A.L.M.S.); (P.M.C.C.E.); (F.M.R.); (J.F.C.A.V.)
| | - Pedro M. C. C. Encarnação
- Institute for Nanostructures, Nanomodelling and Nanofabrication (i3N), Physics Department, University of Aveiro, 3810-193 Aveiro, Portugal; (R.G.O.); (A.L.M.S.); (P.M.C.C.E.); (F.M.R.); (J.F.C.A.V.)
| | - Fabiana M. Ribeiro
- Institute for Nanostructures, Nanomodelling and Nanofabrication (i3N), Physics Department, University of Aveiro, 3810-193 Aveiro, Portugal; (R.G.O.); (A.L.M.S.); (P.M.C.C.E.); (F.M.R.); (J.F.C.A.V.)
| | - Ismael F. Castro
- Radiation Imaging Technologies Lda. (RI-TE), University of Aveiro Incubator, PCI—Creative Science Park, 3830-352 Ílhavo, Portugal;
| | - João F. C. A. Veloso
- Institute for Nanostructures, Nanomodelling and Nanofabrication (i3N), Physics Department, University of Aveiro, 3810-193 Aveiro, Portugal; (R.G.O.); (A.L.M.S.); (P.M.C.C.E.); (F.M.R.); (J.F.C.A.V.)
| |
Collapse
|
23
|
Combining Optical Coherence Tomography and Fundus Photography to Improve Glaucoma Screening. Diagnostics (Basel) 2022; 12:diagnostics12051100. [PMID: 35626256 PMCID: PMC9139676 DOI: 10.3390/diagnostics12051100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Revised: 04/20/2022] [Accepted: 04/25/2022] [Indexed: 12/29/2022] Open
Abstract
We aimed to evaluate the accuracy of glaucoma screening using fundus photography combined with optical coherence tomography and determine the agreement between ophthalmologists and ophthalmology residents. We used a comprehensive ophthalmologic examination dataset obtained from 503 cases (1006 eyes). Of the 1006 eyes, 132 had a confirmed glaucoma diagnosis. Overall, 24 doctors, comprising two groups (ophthalmologists and ophthalmology residents, 12 individuals/group), analyzed the data presented in three screening strategies as follows: (1) fundus photography alone, (2) fundus photography + optical coherence tomography, and (3) fundus photography + optical coherence tomography + comprehensive examination. We investigated the diagnostic accuracy (sensitivity and specificity). The respective sensitivity and specificity values for the diagnostic accuracy obtained by 24 doctors, 12 ophthalmologists, and 12 ophthalmology residents were as follows: (1) fundus photography: sensitivity, 55.4%, 55.4%, and 55.4%; specificity, 91.8%, 94.0%, and 89.6%; (2) fundus photography + OCT: sensitivity, 80.0%, 82.3%, and 77.8%; specificity, 91.7%, 92.9%, and 90.6%; and (3) fundus photography + OCT + comprehensive examination: sensitivity 78.4%, 79.8%, and 77.1%; specificity, 92.7%, 94.0%, and 91.3%. The diagnostic accuracy of glaucoma screening significantly increased with optical coherence tomography. Following its addition, ophthalmologists could more effectively improve the diagnostic accuracy than ophthalmology residents. Screening accuracy is improved when optical coherence tomography is added to fundus photography.
Collapse
|
24
|
Kim TH, Ma G, Son T, Yao X. Functional Optical Coherence Tomography for Intrinsic Signal Optoretinography: Recent Developments and Deployment Challenges. Front Med (Lausanne) 2022; 9:864824. [PMID: 35445037 PMCID: PMC9013890 DOI: 10.3389/fmed.2022.864824] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Accepted: 03/16/2022] [Indexed: 11/13/2022] Open
Abstract
Intrinsic optical signal (IOS) imaging of the retina, also termed as optoretinogram or optoretinography (ORG), promises a non-invasive method for the objective assessment of retinal function. By providing the unparalleled capability to differentiate individual retinal layers, functional optical coherence tomography (OCT) has been actively investigated for intrinsic signal ORG measurements. However, clinical deployment of functional OCT for quantitative ORG is still challenging due to the lack of a standardized imaging protocol and the complication of IOS sources and mechanisms. This article aims to summarize recent developments of functional OCT for ORG measurement, OCT intensity- and phase-based IOS processing. Technical challenges and perspectives of quantitative IOS analysis and ORG interpretations are discussed.
Collapse
Affiliation(s)
- Tae-Hoon Kim
- Richard and Loan Hill Department of Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, United States
| | - Guangying Ma
- Richard and Loan Hill Department of Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, United States
| | - Taeyoon Son
- Richard and Loan Hill Department of Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, United States
| | - Xincheng Yao
- Richard and Loan Hill Department of Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, United States
- Department of Ophthalmology and Visual Sciences, University of Illinois at Chicago, Chicago, IL, United States
| |
Collapse
|
25
|
Yoon K, Seol J, Kim KG. Removal of Specular Reflection Using Angle Adjustment of Linear Polarized Filter in Medical Imaging Diagnosis. Diagnostics (Basel) 2022; 12:diagnostics12040863. [PMID: 35453908 PMCID: PMC9026393 DOI: 10.3390/diagnostics12040863] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Revised: 03/27/2022] [Accepted: 03/28/2022] [Indexed: 02/04/2023] Open
Abstract
The biggest problem in imaging medicine is the occurrence of light reflection in the imaging process for lesion diagnosis. The formation of light reflection obscures the diagnostic field of the lesion and interferes with the correct diagnosis of the observer. The existing method has the inconvenience of performing a diagnosis in a state in which light reflection is suppressed by adjusting the direction angle of the camera. This paper proposes a method for rotating a linear polarization filter to remove light reflection in a diagnostic imaging camera. Vertical polarization and horizontal polarization are controlled through the rotation of the filter, and the polarization is adjusted to horizontal polarization. The rotation angle of the filter for horizontal polarization control will be 90°, and the vertical and horizontal polarization waves induce a 90° difference from each other. In this study, light reflection can be effectively removed during the imaging process, and light reflection removal can secure the field of view of the lesion. The removal of light reflection can help the observer’s accurate diagnosis, and these results are expected to be highly reliable and commercialized for direct application in the field of diagnostic medicine.
Collapse
Affiliation(s)
- Kicheol Yoon
- Medical Devices R&D Center, Gachon University Gil Medical Center, 21, 774 Beon-gil, Namdong-daero, Namdong-gu, Incheon 21565, Korea;
- Department of Biomedical Engineering, College of Medicine, Gachon University, 38-13, 3 Beon-gil, Dokjom-ro 3, Namdong-gu, Incheon 21565, Korea
| | - Jaehwang Seol
- Department of Biomedical Engineering, College of Health Science, Gachon University, 191 Hambak-moero, Yeonsu-gu, Incheon 21936, Korea;
- Department of Health Sciences and Technology, Gachon Advanced Institute for Health Sciences and Technology (GAIHST), Gachon University, 38-13, 3 Beon-gil, Dokjom-ro, Namdong-gu, Incheon 21565, Korea
| | - Kwang Gi Kim
- Medical Devices R&D Center, Gachon University Gil Medical Center, 21, 774 Beon-gil, Namdong-daero, Namdong-gu, Incheon 21565, Korea;
- Department of Biomedical Engineering, College of Medicine, Gachon University, 38-13, 3 Beon-gil, Dokjom-ro 3, Namdong-gu, Incheon 21565, Korea
- Department of Biomedical Engineering, College of Health Science, Gachon University, 191 Hambak-moero, Yeonsu-gu, Incheon 21936, Korea;
- Department of Health Sciences and Technology, Gachon Advanced Institute for Health Sciences and Technology (GAIHST), Gachon University, 38-13, 3 Beon-gil, Dokjom-ro, Namdong-gu, Incheon 21565, Korea
- Correspondence: ; Tel.: +82-32-458-2880
| |
Collapse
|
26
|
Ni S, Khan S, Nguyen TTP, Ng R, Lujan BJ, Tan O, Huang D, Jian Y. Volumetric directional optical coherence tomography. BIOMEDICAL OPTICS EXPRESS 2022; 13:950-961. [PMID: 35284155 PMCID: PMC8884206 DOI: 10.1364/boe.447882] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Revised: 01/14/2022] [Accepted: 01/14/2022] [Indexed: 06/14/2023]
Abstract
Photoreceptor loss and resultant thinning of the outer nuclear layer (ONL) is an important pathological feature of retinal degenerations and may serve as a useful imaging biomarker for age-related macular degeneration. However, the demarcation between the ONL and the adjacent Henle's fiber layer (HFL) is difficult to visualize with standard optical coherence tomography (OCT). A dedicated OCT system that can precisely control and continuously and synchronously update the imaging beam entry points during scanning has not been realized yet. In this paper, we introduce a novel imaging technology, Volumetric Directional OCT (VD-OCT), which can dynamically adjust the incident beam on the pupil without manual adjustment during a volumetric OCT scan. We also implement a customized spoke-circular scanning pattern to observe the appearance of HFL with sufficient optical contrast in continuous cross-sectional scans through the entire volume. The application of VD-OCT for retinal imaging to exploit directional reflectivity properties of tissue layers has the potential to allow for early identification of retinal diseases.
Collapse
Affiliation(s)
- Shuibin Ni
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
- Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon 97239, USA
| | - Shanjida Khan
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
- Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon 97239, USA
| | - Thanh-Tin P. Nguyen
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
| | - Ringo Ng
- School of Engineering Science, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada
| | - Brandon J. Lujan
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
| | - Ou Tan
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
| | - David Huang
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
- Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon 97239, USA
| | - Yifan Jian
- Casey Eye Institute, Oregon Health & Science University, Portland, Oregon 97239, USA
- Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon 97239, USA
| |
Collapse
|
27
|
Kessler LJ, Bagautdinov D, Łabuz G, Auffarth GU, Khoramnia R. Semi-Automated Quantification of Retinal and Choroidal Biomarkers in Retinal Vascular Diseases: Agreement of Spectral-Domain Optical Coherence Tomography with and without Enhanced Depth Imaging Mode. Diagnostics (Basel) 2022; 12:333. [PMID: 35204422 PMCID: PMC8871461 DOI: 10.3390/diagnostics12020333] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2021] [Revised: 01/25/2022] [Accepted: 01/26/2022] [Indexed: 02/01/2023] Open
Abstract
BACKGROUND We compared with and without enhanced depth imaging mode (EDI) in semi-automated quantification of retinal and choroidal biomarkers in optical coherence tomography (OCT) in patients with diabetic retinopathy (DR) or retinal vein occlusion (RVO) complicated by macular edema. We chose to study three OCT biomarkers: the numbers of hyperreflective foci (HF), the ellipsoid zone reflectivity ratio (EZR) and the choroidal vascularity index (CVI), all known to be correlated with visual acuity changes or treatment outcomes. METHODS In a single examination, one eye of each patient (n = 60; diabetic retinopathy: n = 27, retinal vein occlusion: n = 33) underwent macular 870 nm spectral domain-OCT (SD-OCT) B-scans without and with EDI mode. Semi-automated quantification of HF, EZR and CVI was applied according to preexisting published protocols. Paired Student's t-test or Wilcoxon rank-sum test was used to test for differences in subgroups. Intraclass correlation coefficient (ICC) and Bland-Altman plots were applied to describe the agreement between quantification in EDI and conventional OCT mode. The effect of macular edema on semi-automated quantification was evaluated. RESULTS For the entire cohort, quantification of all three biomarkers was not significantly different in SD-OCT scans with and without EDI mode (p > 0.05). ICC was 0.78, 0.90 and 0.80 for HF, EZR and CVI. The presence of macular edema led to significant differences in the quantification of hyperreflective foci (without EDI: 80.00 ± 33.70, with EDI: 92.08 ± 38.11; mean difference: 12.09, p = 0.03), but not in the quantification of EZR and CVI (p > 0.05). CONCLUSION Quantification of EZR and CVI was comparable whether or not EDI mode was used. In conclusion, both retinal and choroidal biomarkers can be quantified from one single 870 nm SD-OCT EDI image.
Collapse
Affiliation(s)
- Lucy J. Kessler
- Department of Ophthalmology, University of Heidelberg, 69120 Heidelberg, Germany; (L.J.K.); (D.B.); (G.Ł.); (G.U.A.)
- HEiKA—Heidelberg Karlsruhe Strategic Partnership, Heidelberg University, 69120 Heidelberg, Germany
- HEiKA—Heidelberg Karlsruhe Strategic Partnership, Karlsruhe Institute of Technology (KIT), 76131 Karlsruhe, Germany
| | - Dmitrii Bagautdinov
- Department of Ophthalmology, University of Heidelberg, 69120 Heidelberg, Germany; (L.J.K.); (D.B.); (G.Ł.); (G.U.A.)
| | - Grzegorz Łabuz
- Department of Ophthalmology, University of Heidelberg, 69120 Heidelberg, Germany; (L.J.K.); (D.B.); (G.Ł.); (G.U.A.)
| | - Gerd U. Auffarth
- Department of Ophthalmology, University of Heidelberg, 69120 Heidelberg, Germany; (L.J.K.); (D.B.); (G.Ł.); (G.U.A.)
| | - Ramin Khoramnia
- Department of Ophthalmology, University of Heidelberg, 69120 Heidelberg, Germany; (L.J.K.); (D.B.); (G.Ł.); (G.U.A.)
- HEiKA—Heidelberg Karlsruhe Strategic Partnership, Heidelberg University, 69120 Heidelberg, Germany
- HEiKA—Heidelberg Karlsruhe Strategic Partnership, Karlsruhe Institute of Technology (KIT), 76131 Karlsruhe, Germany
| |
Collapse
|
28
|
Pijewska E, Zhang P, Meina M, Meleppat RK, Szkulmowski M, Zawadzki RJ. Extraction of phase-based optoretinograms (ORG) from serial B-scans acquired over tens of seconds by mouse retinal raster scanning OCT system. BIOMEDICAL OPTICS EXPRESS 2021; 12:7849-7871. [PMID: 35003871 PMCID: PMC8713677 DOI: 10.1364/boe.439900] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Revised: 11/01/2021] [Accepted: 11/08/2021] [Indexed: 06/14/2023]
Abstract
Several specialized retinal optical coherence tomography (OCT) acquisition and processing methods have been recently developed to allow in vivo probing of light-evoked photoreceptors function, focusing on measurements in individual photoreceptors (rods and cones). Recent OCT investigations in humans and experimental animals have shown that the outer segments in dark-adapted rods and cones elongate in response to the visible optical stimuli that bleach fractions of their visual photopigment. We have previously successfully contributed to these developments by implementing OCT intensity-based "optoretinograms" (ORG), the paradigm of using near-infrared OCT (NIR OCT) to measure bleaching-induced back-scattering and/or elongation changes of photoreceptors in the eye in vivo. In parallel, several groups have successfully implemented phase-based ORGs, mainly in human studies, exploiting changes in the phases of back-scattered light. This allowed more sensitive observations of tiny alterations of photoreceptors structures. Applications of the phase-based ORG have been implemented primarily in high speed and cellular resolution AO-OCT systems that can visualize photoreceptor mosaic, allowing phase measurements of path length changes in outer segments of individual photoreceptors. The phase-based ORG in standard resolution OCT systems is much more demanding to implement and has not been explored extensively. This manuscript describes our efforts to implement a phase analysis framework to retinal images acquired with a standard resolution and raster scanning OCT system, which offers much lower phase stability than line-field or full-field OCT detection schemes due to the relatively slower acquisition speed. Our initial results showcase the successful extraction of phase-based ORG signal from the B-scans acquired at ∼100 Hz rate and its favorable comparison with intensity-based ORG signal extracted from the same data sets. We implemented the calculation of phase-based ORG signals using Knox-Thompson paths and modified signal recovery by adding decorrelation weights. The phase-sensitive ORG signal analysis developed here for mouse retinal raster scanning OCT systems could be in principle extended to clinical retinal raster scanning OCT systems, potentially opening doors for clinically friendly ORG probing.
Collapse
Affiliation(s)
- Ewelina Pijewska
- Institute of Physics, Faculty of Physics, Astronomy and Informatics, Nicolaus Copernicus University in Toruń, Grudziądzka 5, 87-100 Torun, Poland
| | - Pengfei Zhang
- UC Davis Eyepod Imaging Laboratory, Dept. of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA
- School of Optoelectronic Engineering and Instrumentation Science, Dalian University of Technology, No. 2 Linggong Road, Ganjingzi District, Dalian City, Liaoning Province 116024, China
| | - Michał Meina
- Institute of Physics, Faculty of Physics, Astronomy and Informatics, Nicolaus Copernicus University in Toruń, Grudziądzka 5, 87-100 Torun, Poland
| | - Ratheesh K. Meleppat
- UC Davis Eyepod Imaging Laboratory, Dept. of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA
| | - Maciej Szkulmowski
- Institute of Physics, Faculty of Physics, Astronomy and Informatics, Nicolaus Copernicus University in Toruń, Grudziądzka 5, 87-100 Torun, Poland
| | - Robert J. Zawadzki
- UC Davis Eyepod Imaging Laboratory, Dept. of Cell Biology and Human Anatomy, University of California Davis, 4320 Tupper Hall, Davis, CA 95616, USA
- Department of Ophthalmology & Vision Science, University of California Davis, 4860 Y Street Suite 2400 Sacramento, CA 95817, USA
| |
Collapse
|
29
|
Brais-Brunet S, Heckel É, Kanniyappan U, Chemtob S, Boudoux C, Joyal JS, Dehaes M. Morphometric and Microstructural Changes During Murine Retinal Development Characterized Using In Vivo Optical Coherence Tomography. Invest Ophthalmol Vis Sci 2021; 62:20. [PMID: 34698774 PMCID: PMC8556565 DOI: 10.1167/iovs.62.13.20] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
Purpose The purpose of this study was to develop an in vivo optical coherence tomography (OCT) system capable of imaging the developing mouse retina and its associated morphometric and microstructural changes. Methods Thirty-four wild-type mice (129S1/SvlmJ) were anesthetized and imaged between postnatal (P) day 7 and P21. OCT instrumentation was developed to optimize signal intensity and image quality. Semi-automatic segmentation tools were developed to quantify the retinal thickness of the nerve fiber layer (NFL), inner plexiform layer (IPL), inner nuclear layer (INL), and the outer retinal layers (ORL), in addition to the total retina. The retinal maturation was characterized by comparing layer thicknesses between consecutive time points. Results From P7 to P10, the IPL increased significantly, consistent with retinal synaptogenesis. From P10 to P12, the IPL and ORL also increased, which is coherent with synaptic connectivity and photoreceptor maturation. In contrast, during these periods, the INL decreased significantly, consistent with cellular densification and selective apoptotic “pruning” of the tissue during nuclear migration. Thereafter from P12 to P21, the INL continued to thin (significantly from P17 to P21) whereas the other layers remained unchanged. No time-dependent changes were observed in the NFL. Overall, changes in the total retina were attributed to those in the IPL, INL, and ORL. Regions of the retina adjacent to the optic nerve head were thinner than distal regions during maturation. Conclusions Changes in retinal layer thickness are consistent with retinal developmental mechanisms. Accordingly, this report opens new horizons in using our system in the mouse to characterize longitudinally developmental digressions in models of human diseases.
Collapse
Affiliation(s)
- Simon Brais-Brunet
- Institute of Biomedical Engineering, University of Montréal, Montréal, Canada.,Research Center, CHU Sainte-Justine, Montréal, Canada
| | - Émilie Heckel
- Research Center, CHU Sainte-Justine, Montréal, Canada.,Department of Pharmacology, University of Montréal, Montréal, Canada
| | - Udayakumar Kanniyappan
- Institute of Biomedical Engineering, University of Montréal, Montréal, Canada.,Research Center, CHU Sainte-Justine, Montréal, Canada
| | - Sylvain Chemtob
- Research Center, CHU Sainte-Justine, Montréal, Canada.,Department of Pharmacology, University of Montréal, Montréal, Canada.,Department of Pediatrics, University of Montréal, Montréal, Canada.,Department of Ophthalmology, University of Montréal, Montréal, Canada
| | - Caroline Boudoux
- Research Center, CHU Sainte-Justine, Montréal, Canada.,Department of Engineering Physics, Polytechnique Montréal, Montréal, Canada
| | - Jean-Sébastien Joyal
- Research Center, CHU Sainte-Justine, Montréal, Canada.,Department of Pharmacology, University of Montréal, Montréal, Canada.,Department of Pediatrics, University of Montréal, Montréal, Canada.,Department of Ophthalmology, University of Montréal, Montréal, Canada
| | - Mathieu Dehaes
- Institute of Biomedical Engineering, University of Montréal, Montréal, Canada.,Research Center, CHU Sainte-Justine, Montréal, Canada.,Department of Radiology, Radio-oncology and Nuclear Medicine, University of Montréal, Montréal, Canada
| |
Collapse
|
30
|
Valente D, Vienola KV, Zawadzki RJ, Jonnal RS. Simultaneous directional full-field OCT using path-length and carrier multiplexing. OPTICS EXPRESS 2021; 29:32179-32195. [PMID: 34615295 PMCID: PMC8687100 DOI: 10.1364/oe.435761] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Revised: 09/02/2021] [Accepted: 09/07/2021] [Indexed: 06/13/2023]
Abstract
Full-field swept-source optical coherence tomography (FF-SS-OCT) is an emerging technology with potential applications in ophthalmic imaging, microscopy, metrology, and other domains. Here we demonstrate a novel method of multiplexing FF-SS-OCT signals using carrier modulation (CM). The principle of CM could be used to inspect various properties of the scattered light, e.g. its spectrum, polarization, Doppler shift, or distribution in the pupil. The last of these will be explored in this work, where CM was used to acquire images passing through two different optical pupils. The two pupils contained semicircular optical windows with perpendicular orientations, with each window permitting measurement of scattering anisotropy in one dimension by inducing an optical delay between the images formed by the two halves of the pupil. Together, the two forms of multiplexing permit measurement of differential scattering anisotropy in the x and y dimensions simultaneously. To demonstrate the feasibility of this technique our carrier multiplexed directional FF-OCT (CM-D-FF-OCT) system was used to acquire images of a microlens array, human hair, onion skin and in vivo human retina. The results of these studies are presented and briefly discussed in the context of future development and application of this technique.
Collapse
Affiliation(s)
- Denise Valente
- Vision Science and Advanced Retinal Imaging Laboratory (VSRI), Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA 95817, USA
| | - Kari V. Vienola
- Vision Science and Advanced Retinal Imaging Laboratory (VSRI), Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA 95817, USA
| | - Robert J. Zawadzki
- Vision Science and Advanced Retinal Imaging Laboratory (VSRI), Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA 95817, USA
- EyePod Small Animal Ocular Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, CA 95616, USA
| | - Ravi S. Jonnal
- Vision Science and Advanced Retinal Imaging Laboratory (VSRI), Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA 95817, USA
| |
Collapse
|
31
|
Chen W, Tsissios G, Sallese A, Smucker B, Nguyen AT, Chen J, Wang H, Del Rio-Tsonis K. In Vivo Imaging of Newt Lens Regeneration: Novel Insights Into the Regeneration Process. Transl Vis Sci Technol 2021; 10:4. [PMID: 34383878 PMCID: PMC8362625 DOI: 10.1167/tvst.10.10.4] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Purpose To establish optical coherence tomography (OCT) as an in vivo imaging modality for investigating the process of newt lens regeneration. Methods Spectral-domain OCT was employed for in vivo imaging of the newt lens regeneration process. A total of 37 newts were lentectomized and followed by OCT imaging over the course of 60 to 80 days. Histological images were obtained at several time points to compare with the corresponding OCT images. Volume measurements were also acquired. Results OCT can identify the key features observed in corresponding histological images based on the scattering differences from various eye tissues, such as the cornea, intact and regenerated lens, and the iris. Lens volume measurements from three-dimensional OCT images showed that the regenerating lens size increased linearly until 60 days post-lentectomy. Conclusions Using OCT imaging, we were able to track the entire process of newt lens regeneration in vivo for the first time. Three-dimensional OCT images allowed us to volumetrically quantify and visualize the dynamic spatial relationships between tissues during the regeneration process. Our results establish OCT as anin vivo imaging modality to track/analyze the entire lens regeneration process from the same animal. Translational Relevance Lens regeneration in newts represents a unique example of vertebrate tissue plasticity. Investigating the cellular and morphological events that govern this extraordinary process in vivo will advance our understanding and shed light on developing new therapies to treat blinding disorders in higher vertebrates.
Collapse
Affiliation(s)
- Weihao Chen
- Department of Chemical, Paper and Biomedical Engineering, Miami University, Oxford, OH, USA
| | - Georgios Tsissios
- Department of Biology Miami University, Oxford, OH, USA.,Center for Visual Sciences at Miami University, Oxford, OH, USA.,Cellular Molecular and Structural Biology Program, Miami University, Oxford, OH, USA
| | - Anthony Sallese
- Department of Biology Miami University, Oxford, OH, USA.,Center for Visual Sciences at Miami University, Oxford, OH, USA
| | - Byran Smucker
- Center for Visual Sciences at Miami University, Oxford, OH, USA.,Department of Statistics, Miami University, Oxford, OH, USA
| | - Anh-Thu Nguyen
- Department of Chemical, Paper and Biomedical Engineering, Miami University, Oxford, OH, USA
| | - Junfan Chen
- Department of Chemistry and Biochemistry, Miami University, Oxford OH, USA
| | - Hui Wang
- Department of Chemical, Paper and Biomedical Engineering, Miami University, Oxford, OH, USA.,Center for Visual Sciences at Miami University, Oxford, OH, USA
| | - Katia Del Rio-Tsonis
- Department of Biology Miami University, Oxford, OH, USA.,Center for Visual Sciences at Miami University, Oxford, OH, USA.,Cellular Molecular and Structural Biology Program, Miami University, Oxford, OH, USA
| |
Collapse
|
32
|
Meleppat RK, Ronning KE, Karlen SJ, Burns ME, Pugh EN, Zawadzki RJ. In vivo multimodal retinal imaging of disease-related pigmentary changes in retinal pigment epithelium. Sci Rep 2021; 11:16252. [PMID: 34376700 PMCID: PMC8355111 DOI: 10.1038/s41598-021-95320-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 07/20/2021] [Indexed: 02/08/2023] Open
Abstract
Melanosomes, lipofuscin, and melanolipofuscin are the three principal types of pigmented granules found in retinal pigment epithelium (RPE) cells. Changes in the density of melanosomes and lipofuscin in RPE cells are considered hallmarks of various retinal diseases, including Stargardt disease and age-related macular degeneration (AMD). Herein, we report the potential of an in vivo multimodal imaging technique based on directional back-scattering and short-wavelength fundus autofluorescence (SW-FAF) to study disease-related changes in the density of melanosomes and lipofuscin granules in RPE cells. Changes in the concentration of these granules in Abca4-/- mice (a model of Stargardt disease) relative to age-matched wild-type (WT) controls were investigated. Directional optical coherence tomography (dOCT) was used to assess melanosome density in vivo, whereas the autofluorescence (AF) images and emission spectra acquired with a spectrometer-integrated scanning laser ophthalmoscope (SLO) were used to characterize lipofuscin and melanolipofuscin granules in the same RPE region. Subcellular-resolution ex vivo imaging using confocal fluorescence microscopy and electron microscopy was performed on the same tissue region to visualize and quantify melanosomes, lipofuscin, and melanolipofuscin granules. Comparisons between in vivo and ex vivo results confirmed an increased concentration of lipofuscin granules and decreased concentration of melanosomes in the RPE of Abca4-/- mice, and provided an explanation for the differences in fluorescence and directionality of RPE scattering observed in vivo between the two mouse strains.
Collapse
Affiliation(s)
- Ratheesh K Meleppat
- UC Davis Eyepod Imaging Laboratory, University of California Davis, Davis, CA, 95616, USA
- Department of Cell Biology and Human Anatomy, University of California Davis, Davis, CA, 95616, USA
- Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA, USA
| | - Kaitryn E Ronning
- Center for Neuroscience, University of California Davis, Davis, CA, 95618, USA
| | - Sarah J Karlen
- Department of Cell Biology and Human Anatomy, University of California Davis, Davis, CA, 95616, USA
| | - Marie E Burns
- Center for Neuroscience, University of California Davis, Davis, CA, 95618, USA
- Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA, USA
| | - Edward N Pugh
- UC Davis Eyepod Imaging Laboratory, University of California Davis, Davis, CA, 95616, USA
- Department of Cell Biology and Human Anatomy, University of California Davis, Davis, CA, 95616, USA
| | - Robert J Zawadzki
- UC Davis Eyepod Imaging Laboratory, University of California Davis, Davis, CA, 95616, USA.
- Department of Cell Biology and Human Anatomy, University of California Davis, Davis, CA, 95616, USA.
- Department of Ophthalmology and Vision Science, University of California Davis, Sacramento, CA, USA.
| |
Collapse
|
33
|
Oida D, Tomita K, Oikawa K, Wang TA, Makita S, Tsai MT, Yasuno Y. Computational multi-directional optical coherence tomography for visualizing the microstructural directionality of the tissue. BIOMEDICAL OPTICS EXPRESS 2021; 12:3851-3864. [PMID: 34457384 PMCID: PMC8367225 DOI: 10.1364/boe.426125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 05/20/2021] [Accepted: 05/23/2021] [Indexed: 06/13/2023]
Abstract
We demonstrate computational multi-directional optical coherence tomography (OCT) to assess the directional property of tissue microstructure. This method is the combination of phase-sensitive volumetric OCT imaging and post-signal processing. The latter comprises of two steps. The first step is an intensity-directional analysis, which determines the dominant en face fiber orientations. The second step is the phase-directional imaging, which reveals the sub-resolution depth-orientation of the microstructure. The feasibility of the method was tested by assessing muscle and tendon samples. Stripe patterns with several sizes were visualized in the phase-directional images. In order to interpret these images, the muscle and tendon structures were numerically modeled, and the phase-directional images were generated from the numerical model. The similarity of the experimental and numerical results suggested that the stripe patterns correspond to the muscle fiber bundle and its crimping.
Collapse
Affiliation(s)
- Daisuke Oida
- Computational Optics Group, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Kiriko Tomita
- Computational Optics Group, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Kensuke Oikawa
- Computational Optics Group, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Tai-Ang Wang
- Institute of Photonic System, College of Photonics, National Chiao-Tung University, Tainan City 71150, Taiwan
| | - Shuichi Makita
- Computational Optics Group, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Meng-Tsan Tsai
- Department of Electrical Engineering, Chang Gung University, Taoyuan 33302, Taiwan
- Department of Neurosurgery, Chang Gung Memorial Hospital, Linkou, Taoyuan 33305, Taiwan
| | - Yoshiaki Yasuno
- Computational Optics Group, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| |
Collapse
|
34
|
Tan O, Liu L, You Q, Wang J, Chen A, Ing E, Morrison JC, Jia Y, Huang D. Focal Loss Analysis of Nerve Fiber Layer Reflectance for Glaucoma Diagnosis. Transl Vis Sci Technol 2021; 10:9. [PMID: 34111254 PMCID: PMC8107497 DOI: 10.1167/tvst.10.6.9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Purpose To evaluate nerve fiber layer (NFL) reflectance for glaucoma diagnosis. Methods Participants were imaged with 4.5 × 4.5 mm volumetric disc scans using spectral-domain optical coherence tomography. The normalized NFL reflectance map was processed by an azimuthal filter to reduce directional reflectance bias caused by variation of beam incidence angle. The peripapillary area of the map was divided into 160 superpixels. Average reflectance was the mean of superpixel reflectance. Low-reflectance superpixels were identified as those with NFL reflectance below the fifth percentile normative cutoff. Focal reflectance loss was measured by summing loss in low-reflectance superpixels. Results Thirty-five normal, 30 preperimetric, and 35 perimetric glaucoma participants were enrolled. Azimuthal filtering improved the repeatability of the normalized NFL reflectance, as measured by the pooled superpixel standard deviation (SD), from 0.73 to 0.57 dB (P < 0.001, paired t-test) and reduced the population SD from 2.14 to 1.78 dB (P < 0.001, t-test). Most glaucomatous reflectance maps showed characteristic patterns of contiguous wedge or diffuse defects. Focal NFL reflectance loss had significantly higher diagnostic sensitivity than the best NFL thickness parameter (from map or profile): 77% versus 55% (P < 0.001) in glaucoma eyes with the specificity fixed at 99%. Conclusions Azimuthal filtering reduces the variability of NFL reflectance measurements. Focal NFL reflectance loss has excellent glaucoma diagnostic accuracy compared to the standard NFL thickness parameters. The reflectance map may be useful for localizing NFL defects. Translational Relevance The high diagnostic accuracy of NFL reflectance may make population-based screening feasible.
Collapse
Affiliation(s)
- Ou Tan
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Liang Liu
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Qisheng You
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Jie Wang
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Aiyin Chen
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Eliesa Ing
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - John C Morrison
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Yali Jia
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - David Huang
- Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| |
Collapse
|
35
|
Fujita A, Amari T, Ueda K, Azuma K, Inoue T, Komatsu K, Yamamoto M, Aoki N, Yamanari M, Sugiyama S, Aihara M, Kato S, Obata R. Three-Dimensional Distribution Of Fundus Depolarization and Associating Factors Measured Using Polarization-Sensitive Optical Coherence Tomography. Transl Vis Sci Technol 2021; 10:30. [PMID: 34003915 PMCID: PMC7900852 DOI: 10.1167/tvst.10.2.30] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Purpose To investigate the three-dimensional distribution and associating demographic factors of depolarization, using polarization-sensitive optical coherence tomography (PS-OCT), to evaluate melanin pigmentation in the retinal pigment epithelium (RPE) and choroid in healthy eyes. Methods In total, 39 unaffected healthy eyes of 39 subjects were examined using a PS-OCT clinical prototype. The degree of depolarization, expressed as the polarimetric entropy, was assessed in the RPE, the superficial and the total choroid layer, especially in the center, the inner, or the outer areas centered at the fovea. The values and their association with the demographic data were analyzed. Near-infrared fundus autofluorescence (NIRAF) was also used, in the same manner, for the comparison. Twenty-eight of 39 eyes were measured twice to evaluate intrasession repeatability. Results Both the polarimetric entropy in the RPE and the gray level in NIRAF, decreased from the center to the periphery (P < 0.001). The polarimetric entropy in the RPE was significantly associated with age in each area (P ≤ 0.001). In the RPE and the superficial choroid, the polarimetric entropy was negatively associated with axial length in each area (P ≤ 0.002). The intraclass correlation coefficient of the polarimetric entropy in the same session was excellent in each area of the RPE, superficial choroid, or total choroid layer (0.94–0.98). Conclusions The distribution of fundus melanin pigment-related depolarization was evaluated using PS-OCT. The depolarization was associated with the subjects’ demographic data, such as age or axial length. Translational Relevance The presented information in healthy eyes provides an essential basis for the investigation into a variety of chorioretinal pathologies.
Collapse
Affiliation(s)
- Asahi Fujita
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan.,Tokyo Metropolitan Geriatric Hospital, Tokyo, Japan
| | - Tatsuaki Amari
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan.,Eguchi Eye Hospital, Hakodate, Japan
| | - Kohei Ueda
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| | - Keiko Azuma
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| | - Tatsuya Inoue
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan.,Department of Ophthalmology, Yokohama City University Medical Center, Yokohama, Japan
| | - Kayoko Komatsu
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| | - Motoshi Yamamoto
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| | | | | | | | - Makoto Aihara
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| | - Satoshi Kato
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| | - Ryo Obata
- Department of Ophthalmology, The University of Tokyo Hospital, Tokyo, Japan
| |
Collapse
|
36
|
Meleppat RK, Ronning KE, Karlen SJ, Kothandath KK, Burns ME, Pugh EN, Zawadzki RJ. In Situ Morphologic and Spectral Characterization of Retinal Pigment Epithelium Organelles in Mice Using Multicolor Confocal Fluorescence Imaging. Invest Ophthalmol Vis Sci 2021; 61:1. [PMID: 33137194 PMCID: PMC7645167 DOI: 10.1167/iovs.61.13.1] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Abstract
Purpose To investigate the major organelles of the retinal pigment epithelium (RPE) in wild-type (WT, control) mice and their changes in pigmented Abca4 knockout (Abca4−/−) mice with in situ morphologic, spatial, and spectral characterization of live ex vivo flat-mounted RPE using multicolor confocal fluorescence microscopy (MCFM). Methods In situ imaging of RPE flat-mounts of agouti Abca4−/− (129S4), agouti WT (129S1/SvlmJ) controls, and B6 albino mice (C57BL/6J-Tyrc-Brd) was performed with a Nikon A1 confocal microscope. High-resolution confocal image z-stacks of the RPE cell mosaic were acquired with four different excitation wavelengths (405 nm, 488 nm, 561 nm, and 640 nm). The autofluorescence images of RPE, including voxel-by-voxel emission spectra, were acquired and processed with Nikon NIS-AR Elements software. Results The 3-dimensional multicolor confocal images provided a detailed visualization of the RPE cell mosaic, including its melanosomes and lipofuscin granules, and their varying characteristics in the different mice strains. The autofluorescence spectra, spatial distribution, and morphologic features of melanosomes and lipofuscin granules were measured. Increased numbers of lipofuscin and reduced numbers of melanosomes were observed in the RPE of Abca4−/− mice relative to controls. Conclusions A detailed assessment of the RPE autofluorescent granules and their changes ex vivo was possible with MCFM. For all excitation wavelengths, autofluorescence from the RPE cells was predominantly contributed by lipofuscin granules, while melanosomes were found to be essentially nonfluorescent. The red shift of the emission peak confirmed the presence of multiple chromophores within lipofuscin granules. The elevated autofluorescence levels in Abca4−/− mice correlated well with the increased number of lipofuscin granules.
Collapse
Affiliation(s)
- Ratheesh K Meleppat
- UC Davis Eyepod Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States.,Department of Ophthalmology & Vision Science, University of California Davis, Davis, California, United States
| | - Kaitryn E Ronning
- Center for Neuroscience, University of California Davis, Davis, California, United States
| | - Sarah J Karlen
- Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States
| | - Karuna K Kothandath
- UC Davis Eyepod Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States.,Department of Ophthalmology & Vision Science, University of California Davis, Davis, California, United States
| | - Marie E Burns
- Department of Ophthalmology & Vision Science, University of California Davis, Davis, California, United States.,Center for Neuroscience, University of California Davis, Davis, California, United States.,Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States
| | - Edward N Pugh
- UC Davis Eyepod Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States.,Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States
| | - Robert J Zawadzki
- UC Davis Eyepod Imaging Laboratory, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States.,Department of Ophthalmology & Vision Science, University of California Davis, Davis, California, United States
| |
Collapse
|
37
|
Palacios DR, Shen K, Baig S, Wang JH, Zhang C, Chen D, Wang MR. Wide field of view handheld smart fundus camera for telemedicine applications. J Med Imaging (Bellingham) 2021; 8:026001. [PMID: 33748318 DOI: 10.1117/1.jmi.8.2.026001] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 02/25/2021] [Indexed: 11/14/2022] Open
Abstract
Purpose: We report that a large field-of-view (FOV) retinal image can be acquired by a smart fundus camera. Approach: This handheld system consists of a Raspberry Pi board, a touch screen display, a customized optical lens group, a ring light-emitting diode, and a Li-battery. Results: Wide FOV of ∼ 57 deg is observed with proper lens configuration and can be expanded using image stitching algorithms. Conclusions: This customized handheld fundus camera provides better image quality than cellphone-based fundus imaging solutions and offers more operational features than traditional portable fundus cameras. It may benefit field-portable ophthalmic diagnostic applications.
Collapse
Affiliation(s)
- Diego R Palacios
- University of Miami, Department of Electrical and Computer Engineering, Coral Gables, Florida, United States
| | - Kai Shen
- University of Miami, Department of Electrical and Computer Engineering, Coral Gables, Florida, United States
| | - Sarfaraz Baig
- University of Miami, Department of Electrical and Computer Engineering, Coral Gables, Florida, United States
| | - James H Wang
- New Span Opto-Technology Inc., Miami, Florida, United States
| | - Chang Zhang
- University of Miami, Department of Electrical and Computer Engineering, Coral Gables, Florida, United States
| | - Dunhan Chen
- University of Miami, Department of Electrical and Computer Engineering, Coral Gables, Florida, United States
| | - Michael R Wang
- University of Miami, Department of Electrical and Computer Engineering, Coral Gables, Florida, United States
| |
Collapse
|
38
|
Hsu D, Kwon JH, Ng R, Makita S, Yasuno Y, Sarunic MV, Ju MJ. Quantitative multi-contrast in vivo mouse imaging with polarization diversity optical coherence tomography and angiography. BIOMEDICAL OPTICS EXPRESS 2020; 11:6945-6961. [PMID: 33408972 PMCID: PMC7747897 DOI: 10.1364/boe.403209] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Revised: 10/15/2020] [Accepted: 10/31/2020] [Indexed: 05/02/2023]
Abstract
Retinal microvasculature and the retinal pigment epithelium (RPE) play vital roles in maintaining the health and metabolic activity of the eye. Visualization of these retina structures is essential for pre-clinical studies of vision-robbing diseases, such as age-related macular degeneration (AMD). We have developed a quantitative multi-contrast polarization diversity OCT and angiography (QMC-PD-OCTA) system for imaging and visualizing pigment in the RPE using degree of polarization uniformity (DOPU), along with flow in the retinal capillaries using OCT angiography (OCTA). An adaptive DOPU averaging kernel was developed to increase quantifiable values from visual data, and QMC en face images permit simultaneous visualization of vessel location, depth, melanin region thickness, and mean DOPU values, allowing rapid identification and differentiation of disease symptoms. The retina of five different mice strains were measured in vivo, with results demonstrating potential for pre-clinical studies of retinal disorders.
Collapse
Affiliation(s)
- Destiny Hsu
- Simon Fraser University, Biomedical Optics Research Group, Department of Engineering Science, Burnaby, British Columbia, Canada
- co-first author
| | - Ji Hoon Kwon
- Simon Fraser University, Biomedical Optics Research Group, Department of Engineering Science, Burnaby, British Columbia, Canada
- co-first author
| | - Ringo Ng
- Simon Fraser University, Biomedical Optics Research Group, Department of Engineering Science, Burnaby, British Columbia, Canada
| | - Shuichi Makita
- University of Tsukuba, Computational Optics Group, Institute of Applied Physics, Japan
| | - Yoshiaki Yasuno
- University of Tsukuba, Computational Optics Group, Institute of Applied Physics, Japan
| | - Marinko V. Sarunic
- Simon Fraser University, Biomedical Optics Research Group, Department of Engineering Science, Burnaby, British Columbia, Canada
| | - Myeong Jin Ju
- Simon Fraser University, Biomedical Optics Research Group, Department of Engineering Science, Burnaby, British Columbia, Canada
- University of British Columbia, Department of Ophthalmology and Visual Sciences, Vancouver, British Columbia, Canada
- University of British Columbia, School of Biomedical Engineering, Vancouver, British Columbia, Canada
| |
Collapse
|
39
|
Optical coherence tomography reveals light-dependent retinal responses in Alzheimer's disease. Neuroimage 2020; 219:117022. [PMID: 32512126 DOI: 10.1016/j.neuroimage.2020.117022] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Revised: 05/16/2020] [Accepted: 06/02/2020] [Indexed: 12/20/2022] Open
Abstract
Spectral-domain optical coherence tomography (SD-OCT) is an accessible clinical tool for measuring structural changes to the retina, and increasingly as a biomarker for brain-predominant neurodegenerative diseases like Alzheimer's. Information about retinal function can also be extracted from OCT images, but is under-studied, with literature examples often employing challenging protocols or requiring specialized hardware. The first goal of this study was to verify that functional retinal imaging was feasible with a commercially-available SD-OCT device and a clinically practical protocol. Inspired by methods from other functional imaging modalities, we acquired images while repeatedly cycling lights on and off, and spatially normalized retinas to facilitate intra- and inter-individual analyses. In eight healthy young adults, light-dependent increases in reflectivity were easily demonstrated at photoreceptor inner and outer segments, changing by ~7% in bright light and ~3% in dim light. Bright light elicited a subtle (~2%) but consistent light-dependent decrease in reflectivity through much of the rest of the retina, including the avascular outer nuclear layer (ONL). We speculated that some of these changes are influenced by glial function - as through water management - a topic of high interest in neurodegenerative diseases that may involve the glymphatic system. Functional abnormalities in patients with antibodies against aquaporin-4 (n = 3) supported this interpretation. We next compared patients with early-onset Alzheimer's disease (n = 14) to age-matched controls (n = 14), revealing that patients had a relatively exaggerated light-induced change in ONL reflectivity (p < 0.05). Because these measurements can be obtained within 30 min, regular use in research and limited clinical settings is feasible.
Collapse
|
40
|
Gardner MR, Baruah V, Vargas G, Motamedi M, Milner TE, Rylander HG. Scattering Angle Resolved Optical Coherence Tomography Detects Early Changes in 3xTg Alzheimer's Disease Mouse Model. Transl Vis Sci Technol 2020; 9:18. [PMID: 32821490 PMCID: PMC7401921 DOI: 10.1167/tvst.9.5.18] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Accepted: 03/02/2020] [Indexed: 02/07/2023] Open
Abstract
Purpose Clinical intensity-based optical coherence tomographic retinal imaging is unable to resolve some of the earliest changes to Alzheimer's disease (AD) neurons. The aim of this pilot study was to demonstrate that scattering-angle-resolved optical coherence tomography (SAR-OCT), which is sensitive to changes in light scattering angle, is a candidate retinal imaging modality for early AD detection. SAR-OCT signal data may be sensitive to changes in intracellular constituent morphology that are not detectable with conventional OCT. Methods In this cross-sectional study, retinas of a triple transgenic mouse model of AD (3xTg-AD) were imaged alongside age-matched control mice (C57BL/6J) using SAR-OCT. A total of 32 mice (12 control, 20 3xTg-Ad) at four ages (10, 20, 30, and 45 weeks) were included in this cross-sectional study, and three retinal feature sets (scattering, thickness, and angiography) were examined between the disease and control groups. Results AD mice had significantly increased scattering diversity (lower SAR-OCT C parameter) at the earliest imaging time (10 weeks). Differences in the C parameter between AD and control mice were diminished at later times when both groups showed increased scattering diversity. AD mice have reduced retinal thickness compared to controls, particularly in central regions and superficial layers. No differences in vascular density or fractional blood volume between groups were detected. Conclusions SAR-OCT is sensitive to scattering angle changes in a 3xTg-AD mouse model and could provide early-stage biomarkers for neurodegenerative diseases such as AD. Translational Relevance Clinical OCT systems may be modified to record SAR-OCT images for non-invasive retinal diagnostic imaging of patients with neurodegenerative diseases such as AD.
Collapse
Affiliation(s)
- Michael R Gardner
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX, USA.,Department of Biomedical Engineering, King Faisal University, Al-Hofuf, Al-Ahsa, Saudi Arabia
| | - Vikram Baruah
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Gracie Vargas
- Center for Biomedical Engineering, The University of Texas Medical Branch, Galveston, TX, USA
| | - Massoud Motamedi
- Center for Biomedical Engineering, The University of Texas Medical Branch, Galveston, TX, USA
| | - Thomas E Milner
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Henry G Rylander
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX, USA
| |
Collapse
|
41
|
Zhang P, Shibata B, Peinado G, Zawadzki RJ, FitzGerald P, Pugh EN. Measurement of Diurnal Variation in Rod Outer Segment Length In Vivo in Mice With the OCT Optoretinogram. Invest Ophthalmol Vis Sci 2020; 61:9. [PMID: 32176260 PMCID: PMC7401691 DOI: 10.1167/iovs.61.3.9] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Accepted: 11/25/2019] [Indexed: 12/14/2022] Open
Abstract
Purpose To investigate diurnal variation in the length of mouse rod outer segments in vivo. Methods The lengths of rod inner and outer segments (RIS, ROS) of dark-adapted albino mice maintained on a 12-hour dark:12-hour light cycle with light onset 7 AM were measured at prescribed times (6:30 AM, 11 AM, 3:30 PM) during the diurnal cycle with optical coherence tomography (OCT), taking advantage of increased visibility, after a brief bleaching exposure, of the bands corresponding to RIS/ROS boundaries and ROS tips (ROST). Results Deconvolution of OCT depth profiles resolved two backscatter bands located 7.4 ± 0.1 and 10.8 ± 0.2 µm (mean ± SEM) proximal to Bruch's membrane (BrM). These bands were identified with histology as arising from the apical surface of RPE and ROST, respectively. The average length of dark-adapted ROS at 6:30 AM was 17.7 ± 0.8 µm. By 11 AM, the average ROS length had decreased by 10% to 15.9 ± 0.7 µm. After 11 AM, the ROS length increased steadily at an average rate of 0.12 µm/h, returning to baseline length by 23.5 hours in the cycle. Conclusions The diurnal variation in ROS length measured in these experiments is consistent with prior histological investigations showing that rodent rod discs are phagocytosed by the RPE maximally over several hours around the time of normal light onset. The rate of recovery of ROS to baseline length before normal light onset is consistent with the hypothesis that disc membrane synthesis is fairly constant over the diurnal cycle.
Collapse
Affiliation(s)
- Pengfei Zhang
- UC Davis Eye-Pod, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States
| | - Bradley Shibata
- Department of Cell Biology and Human Anatomy, School of Medicine, University of California Davis, Davis, California, United States
| | - Gabriel Peinado
- Department of Cell Biology and Human Anatomy, School of Medicine, University of California Davis, Davis, California, United States
| | - Robert J. Zawadzki
- UC Davis Eye-Pod, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States
- Vision Science and Advanced Retinal Imaging Laboratory (VSRI), Department of Ophthalmology & Vision Science, University of California Davis, Sacramento, California, United States
| | - Paul FitzGerald
- Department of Cell Biology and Human Anatomy, School of Medicine, University of California Davis, Davis, California, United States
| | - Edward N. Pugh
- UC Davis Eye-Pod, Department of Cell Biology and Human Anatomy, University of California Davis, Davis, California, United States
| |
Collapse
|