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Bade A, Yadav P, Zhang L, Naidu Bypaneni R, Xu M, Glass TE. Imaging Neurotransmitters with Small-Molecule Fluorescent Probes. Angew Chem Int Ed Engl 2024; 63:e202406401. [PMID: 38831475 DOI: 10.1002/anie.202406401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Revised: 05/28/2024] [Accepted: 05/29/2024] [Indexed: 06/05/2024]
Abstract
Neurotransmitters play a crucial role in regulating communication between neurons within the brain and central nervous system. Thus, imaging neurotransmitters has become a high priority in neuroscience. This minireview focuses on recent advancements in the development of fluorescent small-molecule fluorescent probes for neurotransmitter imaging and applications of these probes in neuroscience. Innovative approaches for probe design are highlighted as well as attributes which are necessary for practical utility, with a view to inspiring new probe development capable of visualizing neurotransmitters.
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Affiliation(s)
- Anusha Bade
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA
| | - Peeyush Yadav
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA
| | - Le Zhang
- Laboratory of Chemical Immunology and Proteomics, The Rockefeller University, New York NY, 10065, USA
| | | | - Ming Xu
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA
| | - Timothy E Glass
- Department of Chemistry, University of Missouri, Columbia, MO 65211, USA
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2
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Zhang L, Liu XA, Gillis KD, Glass TE. Synthesis of a Near-Infrared Fluorescent Probe for Imaging Catecholamines via a Tandem Nucleophilic Aromatic Substitution. Org Lett 2023; 25:9103-9107. [PMID: 38108670 DOI: 10.1021/acs.orglett.3c03343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
A near-infrared (NIR) fluorescent probe NS667 was developed using a novel synthetic strategy by integrating an electron-rich 1,2,3,4-tetrahydroquinoxaline (THQ) into the scaffold from NS510, which binds to catecholamines with high affinity. The fluorophore core was constructed with a tandem nucleophilic aromatic substitution. Upon binding to catecholamines, the fluorescence of this probe shifted, with the emission in the NIR region. Live cell imaging results demonstrate that NS667 can effectively image norepinephrine in chromaffin cells with shifted fluorescence, which highlights the potential of the probe for neuroimaging in tissues.
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Affiliation(s)
- Le Zhang
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
| | - Xin A Liu
- Dalton Cardiovascular Research Center, University of Missouri, Columbia, Missouri 65211, United States
| | - Kevin D Gillis
- Dalton Cardiovascular Research Center, University of Missouri, Columbia, Missouri 65211, United States
- Department of Chemical and Biomedical Engineering, University of Missouri, Columbia, Missouri 65211, United States
| | - Timothy E Glass
- Department of Chemistry, University of Missouri, Columbia, Missouri 65211, United States
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3
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Choi SB, Polter AM, Nemes P. Patch-Clamp Proteomics of Single Neurons in Tissue Using Electrophysiology and Subcellular Capillary Electrophoresis Mass Spectrometry. Anal Chem 2021; 94:1637-1644. [PMID: 34964611 DOI: 10.1021/acs.analchem.1c03826] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Understanding of the relationship between cellular function and molecular composition holds a key to next-generation therapeutics but requires measurement of all types of molecules in cells. Developments in sequencing enabled semiroutine measurement of single-cell genomes and transcriptomes, but analytical tools are scarce for detecting diverse proteins in tissue-embedded cells. To bridge this gap for neuroscience research, we report the integration of patch-clamp electrophysiology with subcellular shot-gun proteomics by high-resolution mass spectrometry (HRMS). Recording of electrical activity permitted identification of dopaminergic neurons in the substantia nigra pars compacta. Ca. 20-50% of the neuronal soma content, containing an estimated 100 pg of total protein, was aspirated into the patch pipette filled with ammonium bicarbonate. About 1 pg of somal protein, or ∼0.25% of the total cellular proteome, was analyzed on a custom-built capillary electrophoresis (CE) electrospray ionization platform using orbitrap HRMS for detection. A series of experiments were conducted to systematically enhance detection sensitivity through refinements in sample processing and detection, allowing us to quantify ∼275 different proteins from somal aspirate-equivalent protein digests from cultured neurons. From single neurons, patch-clamp proteomics of the soma quantified 91, 80, and 95 different proteins from three different dopaminergic neurons or 157 proteins in total. Quantification revealed detectable proteomic differences between the somal protein samples. Analysis of canonical knowledge predicted rich interaction networks between the observed proteins. The integration of patch-clamp electrophysiology with subcellular CE-HRMS proteomics expands the analytical toolbox of neuroscience.
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Affiliation(s)
- Sam B Choi
- Department of Chemistry & Biochemistry, University of Maryland, College Park, Maryland 20742, United States
| | - Abigail M Polter
- Department of Pharmacology & Physiology, The George Washington University School of Medicine and Health Sciences, Washington, D.C. 20037, United States
| | - Peter Nemes
- Department of Chemistry & Biochemistry, University of Maryland, College Park, Maryland 20742, United States
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4
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Zhang L, Liu XA, Gillis KD, Glass TE. A High-Affinity Fluorescent Sensor for Catecholamine: Application to Monitoring Norepinephrine Exocytosis. Angew Chem Int Ed Engl 2019; 58:7611-7614. [PMID: 30791180 PMCID: PMC6534456 DOI: 10.1002/anie.201810919] [Citation(s) in RCA: 64] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Revised: 01/09/2019] [Indexed: 01/15/2023]
Abstract
A fluorescent sensor for catecholamines, NS510, is presented. The sensor is based on a quinolone fluorophore incorporating a boronic acid recognition element that gives it high affinity for catecholamines and a turn-on response to norepinephrine. The sensor results in punctate staining of norepinephrine-enriched chromaffin cells visualized using confocal microscopy indicating that it stains the norepinephrine in secretory vesicles. Amperometry in conjunction with total internal reflection fluorescence (TIRF) microscopy demonstrates that the sensor can be used to observe destaining of individual chromaffin granules upon exocytosis. NS510 is the highest affinity fluorescent norepinephrine sensor currently available and can be used for measuring catecholamines in live-cell assays.
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Affiliation(s)
- Le Zhang
- Department of Chemistry, University of Missouri, Columbia, Missouri, 65211, USA
| | - Xin A Liu
- Dalton Cardiovascular Research Center, Department of Bioengineering and Department of Medical Pharmacology and Physiology, University of Missouri, Columbia, Missouri, 65211, USA
| | - Kevin D Gillis
- Dalton Cardiovascular Research Center, Department of Bioengineering and Department of Medical Pharmacology and Physiology, University of Missouri, Columbia, Missouri, 65211, USA
| | - Timothy E Glass
- Department of Chemistry, University of Missouri, Columbia, Missouri, 65211, USA
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5
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Zhang L, Liu XA, Gillis KD, Glass TE. A High‐Affinity Fluorescent Sensor for Catecholamine: Application to Monitoring Norepinephrine Exocytosis. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201810919] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Le Zhang
- Department of ChemistryUniversity of Missouri Columbia Missouri 65211 USA
| | - Xin A. Liu
- Dalton Cardiovascular Research CenterDepartment of Bioengineering and Department of Medical Pharmacology and PhysiologyUniversity of Missouri Columbia Missouri 65211 USA
| | - Kevin D. Gillis
- Dalton Cardiovascular Research CenterDepartment of Bioengineering and Department of Medical Pharmacology and PhysiologyUniversity of Missouri Columbia Missouri 65211 USA
| | - Timothy E. Glass
- Department of ChemistryUniversity of Missouri Columbia Missouri 65211 USA
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6
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Ali Doosti B, Cans AS, Jeffries GDM, Lobovkina T. Membrane Remodeling of Giant Vesicles in Response to Localized Calcium Ion Gradients. J Vis Exp 2018. [PMID: 30059020 PMCID: PMC6126466 DOI: 10.3791/57789] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
In a wide variety of fundamental cell processes, such as membrane trafficking and apoptosis, cell membrane shape transitions occur concurrently with local variations in calcium ion concentration. The main molecular components involved in these processes have been identified; however, the specific interplay between calcium ion gradients and the lipids within the cell membrane is far less known, mainly due to the complex nature of biological cells and the difficultly of observation schemes. To bridge this gap, a synthetic approach is successfully implemented to reveal the localized effect of calcium ions on cell membrane mimics. Establishing a mimic to resemble the conditions within a cell is a severalfold problem. First, an adequate biomimetic model with appropriate dimensions and membrane composition is required to capture the physical properties of cells. Second, a micromanipulation setup is needed to deliver a small amount of calcium ions to a particular membrane location. Finally, an observation scheme is required to detect and record the response of the lipid membrane to the external stimulation. This article offers a detailed biomimetic approach for studying the calcium ion-membrane interaction, where a lipid vesicle system, consisting of a giant unilamellar vesicle (GUV) connected to a multilamellar vesicle (MLV), is exposed to a localized calcium gradient formed using a microinjection system. The dynamics of the ionic influence on the membrane were observed using fluorescence microscopy and recorded at video frame rates. As a result of the membrane stimulation, highly curved membrane tubular protrusions (MTPs) formed inside the GUV, oriented away from the membrane. The described approach induces the remodeling of the lipid membrane and MTP production in an entirely contactless and controlled manner. This approach introduces a means to address the details of calcium ion-membrane interactions, providing new avenues to study the mechanisms of cell membrane reshaping.
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Affiliation(s)
- Baharan Ali Doosti
- Department of Chemistry and Chemical Engineering, Chalmers University of Technology
| | - Ann-Sofie Cans
- Department of Chemistry and Chemical Engineering, Chalmers University of Technology
| | - Gavin D M Jeffries
- Department of Chemistry and Chemical Engineering, Chalmers University of Technology
| | - Tatsiana Lobovkina
- Department of Chemistry and Chemical Engineering, Chalmers University of Technology;
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Hoa LNQ, Chen HR, Tseng TTC. An Arrayed Micro-glutamate Sensor Probe Integrated with On-probe Ag/AgCl Reference and Counter Electrodes. ELECTROANAL 2018. [DOI: 10.1002/elan.201700762] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Le Ngoc Quynh Hoa
- Department of Chemical Engineering; National Taiwan University of Science and Technology; Taipei 10607 Taiwan
| | - Hong-Ru Chen
- Department of Chemical Engineering; National Taiwan University of Science and Technology; Taipei 10607 Taiwan
| | - Tina T.-C. Tseng
- Department of Chemical Engineering; National Taiwan University of Science and Technology; Taipei 10607 Taiwan
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Aerts JT, Louis KR, Crandall SR, Govindaiah G, Cox CL, Sweedler JV. Patch clamp electrophysiology and capillary electrophoresis-mass spectrometry metabolomics for single cell characterization. Anal Chem 2014; 86:3203-8. [PMID: 24559180 PMCID: PMC3964733 DOI: 10.1021/ac500168d] [Citation(s) in RCA: 99] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
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The visual selection of specific
cells within an ex vivo brain slice, combined with
whole-cell patch clamp recording and
capillary electrophoresis (CE)–mass spectrometry (MS)-based
metabolomics, yields high chemical information on the selected cells.
By providing access to a cell’s intracellular environment,
the whole-cell patch clamp technique allows one to record the cell’s
physiological activity. A patch clamp pipet is used to withdraw ∼3
pL of cytoplasm for metabolomic analysis using CE–MS. Sampling
the cytoplasm, rather than an intact isolated neuron, ensures that
the sample arises from the cell of interest and that structures such
as presynaptic terminals from surrounding, nontargeted neurons are
not sampled. We sampled the rat thalamus, a well-defined system containing
gamma-aminobutyric acid (GABA)-ergic and glutamatergic neurons. The
approach was validated by recording and sampling from glutamatergic
thalamocortical neurons, which receive major synaptic input from GABAergic
thalamic reticular nucleus neurons, as well as neurons and astrocytes
from the ventral basal nucleus and the dorsal lateral geniculate nucleus.
From the analysis of the cytoplasm of glutamatergic cells, approximately
60 metabolites were detected, none of which corresponded to the compound
GABA. However, GABA was successfully detected when sampling the cytoplasm
of GABAergic neurons, demonstrating the exclusive nature of our cytoplasmic
sampling approach. The combination of whole-cell patch clamp with
single cell cytoplasm metabolomics provides the ability to link the
physiological activity of neurons and astrocytes with their neurochemical
state. The observed differences in the metabolome of these neurons
underscore the striking cell to cell heterogeneity in the brain.
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Affiliation(s)
- Jordan T Aerts
- Beckman Institute for Advanced Science and Technology, ‡Department of Pharmacology, §Department of Molecular and Integrative Physiology, ∥Department of Chemistry, and ⊥Neuroscience Program, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States
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Bright LK, Baker CA, Agasid MT, Ma L, Aspinwall CA. Decreased aperture surface energy enhances electrical, mechanical, and temporal stability of suspended lipid membranes. ACS APPLIED MATERIALS & INTERFACES 2013; 5:11918-26. [PMID: 24187929 PMCID: PMC3909927 DOI: 10.1021/am403605h] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
The development of next-generation transmembrane protein-based biosensors relies heavily on the use of black lipid membranes (BLMs); however, electrical, mechanical, and temporal instability of BLMs poses a limiting challenge to biosensor development. In this work, micrometer-sized glass apertures were modified with silanes of different chain length and fluorine composition, including 3-cyanopropyldimethychlorosilane (CPDCS), ethyldimethylchlorosilane (EDCS), n-octyldimethylchlorosilane (ODCS), (tridecafluoro-1, 1, 2, 2-tetrahydrooctyl)dimethylchlorosilane (PFDCS), or (heptadecafluoro-1,1,2,2-tetrahydrodecyl)dimethylchlorosilane (PFDDCS), to explore the effect of substrate surface energy on BLM stability. Low energy silane-modified surfaces promoted enhanced lipid-substrate interactions that facilitate the formation of low-leakage, stable BLMs. The surface energies of silane-modified substrates were 30 ± 3, 16 ± 1, 14 ± 2, 11 ± 1, and 7.1 ± 2 mJ m(-2) for CDCS, EDCS, ODCS, PFDCS, and PFDDCS, respectively. Decreased surface energy directly correlated to improved electrical, mechanical, and temporal BLM stability. Amphiphobic perfluorinated surface modifiers yielded superior performance compared to traditional hydrocarbon modifiers in terms of stability and BLM formation, with only marginal effects on BLM membrane permeability. Leakage currents obtained for PFDCS and PFDDCS BLMs were elevated only 10-30%, though PFDDCS modification yielded >5-fold increase in electrical stability as indicated by breakdown voltage (> 2000 mV vs 418 ± 73 mV), and >25-fold increase in mechanical stability as indicated by air-water transfers (> 50 vs 2 ± 0.2) when compared to previously reported CPDCS modification. Importantly, the dramatically improved membrane stabilities were achieved with no deleterious effects on reconstituted ion channel function, as evidenced by α-hemolysin activity. Thus, this approach provides a simple, low cost, and broadly applicable alternative for BLM stabilization and should contribute significantly toward the development of next-generation ion-channel-functionalized biosensors.
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Affiliation(s)
- Leonard K. Bright
- Department of Chemistry and Biochemistry University of Arizona, Tucson, AZ 85721
| | - Christopher A. Baker
- Department of Chemistry and Biochemistry University of Arizona, Tucson, AZ 85721
| | - Mark T. Agasid
- Department of Chemistry and Biochemistry University of Arizona, Tucson, AZ 85721
| | - Lin Ma
- Department of Chemistry and Biochemistry University of Arizona, Tucson, AZ 85721
| | - Craig A. Aspinwall
- Department of Chemistry and Biochemistry University of Arizona, Tucson, AZ 85721
- BIO5 Institute, University of Arizona, Tucson, AZ 85721
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10
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Trojanowicz M. Recent developments in electrochemical flow detections—A review. Anal Chim Acta 2009; 653:36-58. [DOI: 10.1016/j.aca.2009.08.040] [Citation(s) in RCA: 103] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2009] [Revised: 08/04/2009] [Accepted: 08/28/2009] [Indexed: 12/17/2022]
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11
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Contributions of capillary electrophoresis to neuroscience. J Chromatogr A 2007; 1184:144-58. [PMID: 18054026 DOI: 10.1016/j.chroma.2007.10.098] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2007] [Revised: 10/16/2007] [Accepted: 10/29/2007] [Indexed: 11/23/2022]
Abstract
Capillary electrophoresis (CE) is a small-volume separation approach amenable to the analysis of complex samples for their small molecule, peptide and protein content. A number of the features of CE make it a method of choice for addressing questions related to neurochemistry. The figures of merit inherent to CE that make it well suited for studying cell-to-cell and intracellular signaling include small sample volumes, high separation efficiency, the ability for online analyte concentration, and compatibility with sensitive and high-information content detection methods. A variety of instrumental aspects are detailed, including detection methods and sampling techniques that are particularly useful for the analysis of signaling molecules. Studies that have used these techniques to increase our understanding of neurobiology are emphasized throughout. One notable application is single neuron chemical analysis, a research area that has been greatly advanced by CE.
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12
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Chiu DT, Zare RN. Optical Detection and Manipulation of Single Molecules in Room-Temperature Solutions. Chemistry 2006. [DOI: 10.1002/chem.19970030304] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Gayton-Ely M, Pappas TJ, Holland LA. Probing affinity via capillary electrophoresis: advances in 2003–2004. Anal Bioanal Chem 2005; 382:570-80. [PMID: 15703915 DOI: 10.1007/s00216-004-3033-z] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2004] [Accepted: 12/09/2004] [Indexed: 10/25/2022]
Abstract
This review addresses recent advances in capillary electrophoresis of biological-based molecular interaction from a broader perspective, based on applications reported during the period 2003-2004. These capillary electrophoresis-based studies of molecular interactions include affinity capillary electrophoresis, electrokinetic chromatography, and free zone electrophoresis. The review is written as a general synopsis of applications and does not cover the theory or protocol involved in the implementation of the analyses.
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Affiliation(s)
- Melissa Gayton-Ely
- Department of Chemistry, West Virginia University, 217 Clark Hall, P.O.Box 6045, Morgantown, WV 26506, USA
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15
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Saitoh H, Namatame Y, Hirano A, Sugawara M. An excised patch membrane sensor for arachidonic acid released in mouse hippocampal slices under stimulation of L-glutamate. Anal Biochem 2005; 329:163-72. [PMID: 15158474 DOI: 10.1016/j.ab.2004.03.060] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2003] [Indexed: 11/22/2022]
Abstract
An excised patch membrane sensor for arachidonic acid (AA) is described, whose response stems from AA-induced channel-type transport of ions across the excised patch membrane. The patch membrane sensor was prepared in situ by excising mouse hippocampal cell membranes with patch pipets having a tip diameter of < 0.5 microm. The sensor responds to AA, giving rise to a channel-type current, and its magnitude (apparent conductance) increased with increasing AA concentration in the range from 10 to 30 nM. The detection limit was 2.1 nM (S/N = 3). The induction of channel-type currents was selective to AA over fatty acids such as palmitic acid, stearic acid, oleic acid, gamma-linolenic acid, and docosahexaenoic acid and AA metabolites such as 12-HETE, 5-HETE, and prostaglandin D(2). The sensor was applied to quantification of AA released from various neuronal regions (CA1, CA3, and DG) of mouse hippocampus under stimulation of 100 microM L-glutamate. The release of AA from each region was observed 1 min after the stimulation and the concentration of AA 5 min after the stimulation varied among the neuronal sites, i.e., 8+/-1 nM (n = 5) for CA1, 15+/-3 nM (n = 3) for CA3, and 6+/-2 nM (n = 9) for DG. The L-glutamate-evoked release of AA was partly inhibited by ionotropic glutamate receptor antagonists (APV and DNQX) and completely blocked by phospholipase A2 (PLA2) inhibitor (MAFP), suggesting that the release of AA occurred by glutamate receptor-mediated activation of PLA2. The potential use of the present sensor for detecting local concentration of AA at various neuronal sites is discussed.
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Affiliation(s)
- Hiroto Saitoh
- Department of Chemistry, College of Humanities and Sciences, Nihon University, Sakurajousui, Setagaya, Tokyo 156-8550, Japan
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16
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Abstract
A single-cell detector is described that combines the natural signal amplification of whole-cell biosensors with the flexibility and specificity of immunological recognition. An immune cell that expresses receptors for the constant region of immunoglobulin G (IgG) is loaded with a Ca(2+)-indicating dye and with antibodies directed against the protein of interest. Introduction of a multivalent protein antigen causes cross-linking of the receptors, which results in a detectable increase in the concentration of cytosolic Ca(2+). Some immune cell lines respond to stimulation with oscillations in their cytosolic Ca(2+) levels that complicate their use as detectors. The human monocytic cell line U-937, when treated with the cytokine interferon-gamma, produces a large, short-lived Ca(2+) signal in response to cross-linking of its high-affinity IgG receptors. U-937 was therefore chosen for development as an immunity-based detector. Human and rabbit antibodies are found to effectively stimulate the cell, causing a prompt and transient response. The cell is able to respond to repeated stimulation, though the response diminishes during rapid stimulation. Ovalbumin can be detected in micromolar concentrations. Possible fundamental constraints on the size of a detectable analyte are discussed.
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Affiliation(s)
- Rebecca J Whelan
- Department of Chemistry, Stanford University, Stanford, CA 94305-5080, USA
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17
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Mausset-Bonnefont AL, de Sèze R, Privat A. Immunohistochemistry as a tool for topographical semi-quantification of neurotransmitters in the brain. BRAIN RESEARCH. BRAIN RESEARCH PROTOCOLS 2003; 10:148-55. [PMID: 12565685 DOI: 10.1016/s1385-299x(02)00206-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Immunohistochemistry is a powerful tool to detect neurotransmitter (NT) presence in different brain structures with a high spatial resolution. However, it is only scarcely used in quantitative approach due to lack of reproducibility and sensitivity. We developed a protocol of NT detection based on immunohistochemistry and image analysis to show that this approach could also be useful to evaluate NT content variations. We focused our study on the GABAergic system in the cerebellum and measured different accurate parameters, namely the optical density (O.D.), the stained area and the number of immunoreactive cells in each cerebellar cell layer. In order to modify the GABA content, we used gamma-vinyl-GABA (GVG), an inhibitor of GABA-transaminase, known to dramatically increase GABA concentration in the central nervous system (CNS) and especially in the cerebellum. We observed a significant increase in the three parameters measured in the molecular and the granular layers of the cerebellum after treatment with GVG, reflecting the well-established increase in GABA content after such a treatment. Therefore, our technical approach allows not only a precise determination of the effects in particular cell layers but also a semi-quantification of GABA content variations. This technique could be suitable for monitoring NT variations following any treatment.
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Affiliation(s)
- Anne Laure Mausset-Bonnefont
- INSERM U336, Développement, Plasticité et Vieillissement du Système Nerveux, Université Montpellier II, Place Eugène Bataillon, B.P. 106, 34095 Montpellier Cedex 5, France.
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18
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Drechsler U, Thibault RJ, Rotello VM. Formation of Recognition-Induced Polymersomes Using Complementary Rigid Random Copolymers. Macromolecules 2002. [DOI: 10.1021/ma025622e] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ulf Drechsler
- Department of Chemistry, University of Massachusetts, Amherst, Massachusetts 01003
| | - Raymond J. Thibault
- Department of Chemistry, University of Massachusetts, Amherst, Massachusetts 01003
| | - Vincent M. Rotello
- Department of Chemistry, University of Massachusetts, Amherst, Massachusetts 01003
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Mausset AL, de Seze R, Montpeyroux F, Privat A. Effects of radiofrequency exposure on the GABAergic system in the rat cerebellum: clues from semi-quantitative immunohistochemistry. Brain Res 2001; 912:33-46. [PMID: 11520491 DOI: 10.1016/s0006-8993(01)02599-9] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The widespread use of cellular phones raises the problem of interaction of electromagnetic fields with the central nervous system (CNS). In order to measure these effects on neurotransmitter content in the CNS, we developed a protocol of neurotransmitter detection based on immunohistochemistry and image analysis. Gamma-vinyl-GABA (GVG), an inhibitor of the GABA-transaminase was injected in rats to increase GABA concentration in the CNS. The cellular GABA contents were then revealed by immunohistochemistry and semi-quantified by image analysis thanks to three parameters: optical density (O.D.), staining area, and number of positive cells. The increase in cerebellar GABA content induced by GVG 1200 mg/kg was reflected in these three parameters in the molecular and the granular layers. Therefore, control of immunohistochemistry parameters, together with appropriate image analysis, allowed both the location and the detection of variations in cellular neurotransmitter content. This protocol was used to investigate the effects of exposure to 900 MHz radiofrequencies on cerebellar GABA content. Both pulsed emission with a specific absorption rate (SAR) of 4 W/kg and continuous emission with high SAR (32 W/kg) were tested. We observed a selective diminution of the stained processes area in the Purkinje cell layer after exposure to pulsed radiofrequency and, in addition, a decrease in O.D. in the three cell layers after exposure to continuous waves. Whether this effect is, at least partly, due to a local heating of the tissues is not known. Overall, it appears that high energetic radiofrequency exposure induces a diminution in cellular GABA content in the cerebellum.
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Affiliation(s)
- A L Mausset
- Laboratoire de Biophysique Médicale, Faculté de Médecine de Nîmes, Avenue Kennedy, 30907 Cedex 2, Nîmes, France
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Farre C, Sjöberg A, Jardemark K, Jacobson I, Orwar O. Screening of ion channel receptor agonists using capillary electrophoresis-patch clamp detection with resensitized detector cells. Anal Chem 2001; 73:1228-33. [PMID: 11305656 DOI: 10.1021/ac001061i] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Efficient techniques for identifying endogenous and synthetic ligands of ion channels are important in understanding neuronal communication and for screening drug libraries. This paper describes a technique based on capillary electrophoresis (CE) separation coupled to patch-clamp (PC) detection where a pulsed-flow superfusion scheme was implemented for improved detection. The nicotinic acetylcholine receptor (nAChr) agonists acetylcholine, carbachol, and (-)-nicotine were fractionated and detected by patch-clamped pheochromcytoma detector cells. The high-conductance state of the nAChr during CE-PC detection was maintained and repetitively resensitized using pulsed-flow superfusion with agonist-free buffer. In this way, each agonist evoked an ensemble of peak currents that reflected the spatiotemporal distribution for the ligand at the cell surface. The technique takes advantage of the intrinsic high selectivity and sensitivity of membrane-expressed receptors and allowed for resolution and identification of closely migrating ligands. The method was employed for determination of acetylcholine content in cell lysates.
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Affiliation(s)
- C Farre
- Department of Chemistry, Göteborg University, Sweden
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21
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Bossi A, Piletsky SA, Righetti PG, Turner AP. Capillary electrophoresis coupled to biosensor detection. J Chromatogr A 2000; 892:143-53. [PMID: 11045485 DOI: 10.1016/s0021-9673(00)00173-4] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
The present review highlights some modern aspects of biosensor revelation, a detection method which has already found a large number of applications in healthcare, food industry and environmental analysis. First, the concept of bio-recognition, which is at the heart of biosensor technology, is discussed, with emphasis on host-guest-like recognition mechanisms. This detection device has been successfully coupled, in its first applications, to chromatographic columns, which allow a high resolution of complex mixtures of analytes prior to interaction with the biosensing unit. The properties of the transducing elements, which should generate a signal (e.g., electrochemical, thermal, acoustic, optical) of proper intensity and of relative fast rise, are additionally evaluated and discussed. The review then focuses on potential applications of biosensing units in capillary electrophoresis (CE) devices. CE appears to be an excellent separation methodology to be coupled to biosensor detection, since it is based on miniaturized electrophoretic chambers, fast analysis times, complete automation in sample handling and data treatment and requires extremely small sample volumes. Although only a few applications of CE-based biosensors have been described up to the present, it is anticipated that this hyphenated technique could have a considerable expansion in the coming years.
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Affiliation(s)
- A Bossi
- University of Verona, Department of Agricultural and Industrial Biotechnologies, Italy.
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22
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Affiliation(s)
- Hagan Bayley
- Department of Medical Biochemistry and Genetics, Texas A&M University System Health Science Center, 440 Reynolds Medical Building, College Station, Texas 77843-1114, Department of Chemistry, Texas A&M University, College Station, Texas 77843-3255, and Department of Chemistry and Center for Research at the Bio/Nano Interface, University of Florida, Gainesville, Florida 32605-1200
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23
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Abstract
Molecular recognition may be characterized both qualitatively and quantitatively by electrophoretic methods if complexed molecules differ in electrophoretic mobility from unbound ones. The use of capillary zone electrophoresis (CE) for the characterization of affinity interactions is advantageous because of the high resolution, reproducibility and wide applicability of the technique and because of the mild conditions, i.e., physiological buffers without additions of organics or detergents, that are often sufficient for highly efficient separations. CE gives the ability to characterize binding between small amounts of unlabelled reactants in solution, has few requirements for special characteristics of the interacting molecules and is also applicable to the study of interactions of individual components in mixtures, as detection of binding and analytical separation are achieved in one step. This is unique compared with other techniques for the study of non-covalent interactions. The advantages and disadvantages of using CE to demonstrate molecular interactions, to screen for specific ligand binding in complex mixtures and to calculate binding constants will be discussed.
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Affiliation(s)
- N H Heegaard
- Department of Autoimmunology, Statens Serum Institut, Copenhagen, Denmark.
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24
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Guetens G, Van Cauwenberghe K, De Boeck G, Maes R, Tjaden UR, van der Greef J, Highley M, van Oosterom AT, de Bruijn EA. Nanotechnology in bio/clinical analysis. JOURNAL OF CHROMATOGRAPHY. B, BIOMEDICAL SCIENCES AND APPLICATIONS 2000; 739:139-50. [PMID: 10744322 DOI: 10.1016/s0378-4347(99)00553-8] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Nanotechnology is being exploited now in different fields of analytical chemistry: Single cell analysis; in chip/micro machined devices; hyphenated technology and sampling techniques. Secretory vesicles can be chemically and individually analyzed with a combination of optical trapping, capillary electrophoresis separation, and laser induced fluorescence detection. Attoliters (10(-18) l) can be introduced into the tapered inlets of separation capillaries. Chip technology has come of age in the field of genomics, allowing faster analyses, and will fulfil an important role in RNA and peptide/protein analysis. The introduction of nanotechnology in LC-MS and CE-MS has resulted in new findings in the study of DNA adduct formation caused by carcinogenic substances, including anticancer drugs. Sample handling and introduction also can benefit from nanotechnology: The downscaling of sample volumes to the picoliter level has resulted in zeptomole (10(-21)) detection limits in the single-shot mass spectrum of proteins.
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Affiliation(s)
- G Guetens
- Department of Chemistry, University of Antwerp, Belgium
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25
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Zhang Z, Krylov S, Arriaga EA, Polakowski R, Dovichi NJ. One-dimensional protein analysis of an HT29 human colon adenocarcinoma cell. Anal Chem 2000; 72:318-22. [PMID: 10658325 DOI: 10.1021/ac990694y] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A single HT29 human colon adenocarcinoma cell was introduced into a fused-silica capillary and lysed, and the protein content was fluorescently labeled with the fluorogenic reagent 3-(2-furoyl)quinoline-2-carboxaldehyde. The labeled proteins were separated by capillary electrophoresis in a submicellar buffer and detected by laser-induced fluorescence in a postcolumn sheath-flow cuvette. Several dozen components were resolved. A number of experiments were done to verify that these components were proteins. Most components of the single-cell electropherogram had the same mobility as components present in the 30-100 kDa fraction of a protein extract prepared from the cell culture. One component was identified as a approximately 100 kDa protein by co-injecting the sample with purified protein obtained from an SDS-PAGE gel. Protein expression varied significantly between cells, but the average expression was consistent with that observed from a protein extract prepared from 10(6) cells.
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Affiliation(s)
- Z Zhang
- Department of Chemistry, University of Alberta, Edmonton, Canada
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26
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Heegaard NH, Kennedy RT. Identification, quantitation, and characterization of biomolecules by capillary electrophoretic analysis of binding interactions. Electrophoresis 1999; 20:3122-33. [PMID: 10596820 DOI: 10.1002/(sici)1522-2683(19991001)20:15/16<3122::aid-elps3122>3.0.co;2-m] [Citation(s) in RCA: 110] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The high resolving power of capillary electrophoresis combined with the specificity of binding interactions may be used with advantage to characterize the structure-function relationship of biomolecules, to quantitate specific analytes in complex sample matrices, and to determine the purity of pharmaceutical and other molecules. We here review recent and innovative methodologies and applications of high resolution affinity electrophoresis within the fields of binding constant determination, structure-activity studies, quantitative microassays, analysis of drug purity and protein conformation, and immobilized affinity ligands. Despite the virtues of these approaches with respect to applicability, resolving power, speed, and low sample consumption, problems remain with respect to analyte identification and low concentration limits of detection. The ongoing development of new detector technologies for capillary electrophoresis such as mass spectrometry, and possibly nuclear magnetic resonance and other spectroscopic methods, is therefore very promising for the continued increased use of affinity capillary electrophoresis.
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Affiliation(s)
- N H Heegaard
- Department of Autoimmunology, Statens Serum Institut, Copenhagen, Denmark.
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27
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Sitaram BR, Keah HH, Hearn MT. Studies on the relationship between structure and electrophoretic mobility of alpha-helical and beta-sheet peptides using capillary zone electrophoresis. J Chromatogr A 1999; 857:263-73. [PMID: 10536845 DOI: 10.1016/s0021-9673(99)00768-2] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The electrophoretic behaviour of a series of 33 different synthetic peptides has been investigated using free solution high-performance capillary zonal electrophoretic (HPCZE) methods. The dependency of the electrophoretic mobility, mu(em), on the peptide charge, q, and on the charge-to-size ratio parameter, zeta, determined according to several electromobility models, have been examined. Significant divergences from linearity in the mu(em) vs. q or the mu(em) vs. zeta plots were noted for several peptides, possibly due to the proclivity of specific arrangements of their amino acid sequences to assume preferred alpha-helical or beta-sheet conformational features rather than random coil structures under the HPCZE conditions. These results provide further demonstration of the facility of HPCZE procedures to probe the effects of compositional, sequential and conformational differences of closely-related peptides and their consequences on their physicochemical behaviour in solution.
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Affiliation(s)
- B R Sitaram
- Centre for Bioprocess Technology, Department of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria, Australia
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28
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Krylov SN, Zhang Z, Chan NW, Arriaga E, Palcic MM, Dovichi NJ. Correlating cell cycle with metabolism in single cells: combination of image and metabolic cytometry. CYTOMETRY 1999; 37:14-20. [PMID: 10451502 DOI: 10.1002/(sici)1097-0320(19990901)37:1<14::aid-cyto2>3.0.co;2-j] [Citation(s) in RCA: 79] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
BACKGROUND We coin two terms: First, chemical cytometry describes the use of high-sensitivity chemical analysis techniques to study single cells. Second, metabolic cytometry is a form of chemical cytometry that monitors a cascade of biosynthetic and biodegradation products generated in a single cell. In this paper, we describe the combination of metabolic cytometry with image cytometry to correlate oligosaccharide metabolic activity with cell cycle. We use this technique to measure DNA ploidy, the uptake of a fluorescent disaccharide, and the amount of metabolic products in a single cell. METHODS A colon adenocarcinoma cell line (HT29) was incubated with a fluorescent disaccharide, which was taken up by the cells and converted into a series of biosynthetic and biodegradation products. The cells were also treated with YOYO-3 and Hoechst 33342. The YOYO-3 signal was used as a live-dead assay, while the Hoechst 33342 signal was used to estimate the ploidy of live cells by fluorescence image cytometry. After ploidy analysis, a cell was injected into a fused-silica capillary, where the cell was lysed. Fluorescent metabolic products were then separated by capillary electrophoresis and detected by laser-induced fluorescence. RESULTS Substrate uptake measured with metabolic cytometry gave rise to results similar to those measured by use of laser scanning confocal microscopy. The DNA ploidy histogram obtained with our simple image cytometry technique was similar to that obtained using flow cytometry. The cells in the G(1) phase did not show any biosynthetic activity in respect to the substrate. Several groups of cells with unique biosynthetic patterns were distinguished within G(2)/M cells. CONCLUSIONS This is the first report that combined metabolic and image cytometry to correlate formation of metabolic products with cell cycle. A complete enzymatic cascade is monitored on a cell-by-cell basis and correlated with cell cycle.
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Affiliation(s)
- S N Krylov
- Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada
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29
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Orwar O, Jardemark K, Farre C, Jacobson I, Moscho A, Shear JB, Fishman HA, Lillard SJ, Zare RN. Voltage-clamp biosensors for capillary electrophoresis. Methods Enzymol 1999; 294:189-208. [PMID: 9916228 DOI: 10.1016/s0076-6879(99)94012-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
Affiliation(s)
- O Orwar
- Department of Chemistry, Göteborg University, Sweden
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30
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Hsieh MM, Chang HT. Dynamic control for ultra-fast separations of organic acids in capillary zone electrophoresis. J Chromatogr A 1998. [DOI: 10.1016/s0021-9673(98)00347-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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31
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Jardemark K, Farre C, Jacobson I, Zare RN, Orwar O. Screening of receptor antagonists using agonist-activated patch clamp detection in chemical separations. Anal Chem 1998; 70:2468-74. [PMID: 9666721 DOI: 10.1021/ac971147k] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
We present a capillary electrophoresis-patch clamp detection system optimized for screening of antagonists and inhibitors of ligand-gated ion channels. In this system, highly selective receptor agonists are delivered through the electrophoresis capillary to the cell surface where they continuously activate a receptor, resulting in increased steady-state transmembrane currents. Thus, receptor selection and biosensor functionality is simply achieved by selection of an appropriate agonist. The antagonists are fractionated in the same electrophoresis capillary and inhibit the agonist-evoked response, resulting in transiently decreased steady-state transmembrane currents. Specifically, a mixture containing 6-cyano-7-nitroquinoxaline-2,3-dione, that reversibly blocks alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionate and kainate receptors, and 6,7-dichloro-3-hydroxy-2-quinoxaline-carboxylate, a broad-spectrum glutamate receptor antagonist, were separated and detected by kainate-activated patch-clamped interneurons freshly dissociated from rat brain olfactory bulb. In addition, Mg2+ that reversibly blocks the N-methyl-D-aspartate receptor in a voltage-dependent way was detected using the same cell detector system when activated by N-methyl-D-aspartate and the co-agonist glycine. The presented method offers new possibilities for drug screening and for identifying endogenous receptor antagonists and to determine their mode of action on any ionotropic receptor system of interest.
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Affiliation(s)
- K Jardemark
- Department of Anatomy and Cell Biology, Göteborg University, Sweden
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32
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Fishman HA, Greenwald DR, Zare RN. Biosensors in chemical separations. ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 1998; 27:165-98. [PMID: 9646866 DOI: 10.1146/annurev.biophys.27.1.165] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Identification of biomolecules in complex biological mixtures represents a major challenge in biomedical, environmental, and chemical research today. Chemical separations with traditional detection schemes such as absorption, fluorescence, refractive index, conductivity, and electrochemistry have been the standards for definitive identifications of many compounds. In many instances, however, the complexity of the biomixture exceeds the resolution capability of chemical separations. Biosensors based on molecular recognition can dramatically improve the selectivity of and provide biologically relevant information about the components. This review describes how coupling chemical separations with online biosensors solves challenging problems in sample analysis by identifying components that would not normally be detectable by either technique alone. This review also presents examples and principles of combining chemical separations with biosensor detection that uses living systems, whole cells, membrane receptors, enzymes, and immunosensors.
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Affiliation(s)
- H A Fishman
- Department of Chemistry, Stanford University, California 94305, USA.
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33
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Affiliation(s)
- Stephen C. Beale
- Department of Chemistry, University of Alabama at Birmingham, 901 South 14th Street, CHEM 277, Birmingham, Alabama 36294
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34
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Crofcheck CL, Grosvenor AL, Anderson KW, Lumpp JK, Scott DL, Daunert S. Detecting biomolecules in picoliter vials using aequorin bioluminescence. Anal Chem 1997; 69:4768-72. [PMID: 9406527 DOI: 10.1021/ac9706786] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The quantitative determination of proteins in picoliter-volume vials is described. The assay is based on the bioluminescence of the photoprotein aequorin along with photon-counting detection. Using this approach, avidin can be detected at femtomole levels by taking advantage of its inhibitory effect on the bioluminescence signal generated by biotinylated recombinant aequorin. The picoliter vials were fabricated on glass substrates using a laser ablation technique. Parameters that affect the reproducibility of the assay such as the fabrication and calibration of the pipets, the fabrication of the vials, and the composition of the assay solutions were studied.
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Affiliation(s)
- C L Crofcheck
- Department of Chemical and Materials Engineering, University of Kentucky, Lexington 40506-0055, USA
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35
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Jardemark K, Orwar O, Jacobson I, Moscho A, Zare RN. Patch clamp detection in capillary electrophoresis. Anal Chem 1997; 69:3427-34. [PMID: 9286160 DOI: 10.1021/ac970158a] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
We describe a capillary electrophoresis-patch clamp (CE-PC) analysis of biomolecules that activate ligand-gated ion channels. CE-PC offers a powerful means for identifying receptor ligands based on the combination of the characteristic receptor responses they evoke and their differential electrophoretic migration rates. Corner frequencies, membrane reversal potentials, and mean and unitary single-channel receptor responses were calculated from currents recorded with patch clamp detection. This information was then combined with the electrophoretic mobility of the receptor ligand, which is proportional to the charge-to-frictional-drag ratio of that species. We applied CE-PC to separate and detect the endogenous receptor agonists gamma-aminobutyrate and L-glutamate and the synthetic glutamate receptor agonists N-methyl-D-aspartate and kainic acid. We present dose-response data for electrophoretically separated kainic acid and discuss its implications for making the CE-PC detection system quantitative.
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Affiliation(s)
- K Jardemark
- Department of Anatomy and Cell Biology, Faculty of Medicine, Göteborg University, Sweden
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36
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Braha O, Walker B, Cheley S, Kasianowicz JJ, Song L, Gouaux JE, Bayley H. Designed protein pores as components for biosensors. CHEMISTRY & BIOLOGY 1997; 4:497-505. [PMID: 9263637 DOI: 10.1016/s1074-5521(97)90321-5] [Citation(s) in RCA: 256] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
BACKGROUND There is a pressing need for new sensors that can detect a variety of analytes, ranging from simple ions to complex compounds and even microorganisms. The devices should offer sensitivity, speed, reversibility and selectivity. Given these criteria, protein pores, remodeled so that their transmembrane conductances are modulated by the association of specific analytes, are excellent prospects as components of biosensors. RESULTS Structure-based design and a separation method that employs targeted chemical modification have been used to obtain a heteromeric form of the bacterial pore-forming protein staphylococcal alpha-hemolysin, in which one of the seven subunits contains a binding site for a divalent metal ion, M(II), which serves as a prototypic analyte. The single-channel current of the heteromer in planar bilayers is modulated by nanomolar Zn(II). Other M(II)s modulate the current and produce characteristic signatures. In addition, heteromers containing more than one mutant subunit exhibit distinct responses to M(II)s Hence, a large collection of responsive pores can be generated through subunit diversity and combinatorial assembly. CONCLUSIONS Engineered pores have several advantages as potential sensor elements: sensitivity is in the nanomolar range; analyte binding is rapid (diffusion limited in some cases) and reversible; strictly selective binding is not required because single-channel recordings are rich in information; and for a particular analyte, the dissociation rate constant, the extent of channel block and the voltage-dependence of these parameters are distinguishing, while the frequency of partial channel block reflects the analyte concentration. A single sensor element might, therefore, be used to quantitate more than one analyte at once. The approach described here can be generalized for additional analytes.
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Affiliation(s)
- O Braha
- Department of Medical Biochemistry and Genetics, Texas A&M Health Science Center, College Station 77843-1114, USA
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37
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Chiu DT, Hsiao A, Gaggar A, Garza-López RA, Orwar O, Zare RN. Injection of ultrasmall samples and single molecules into tapered capillaries. Anal Chem 1997; 69:1801-7. [PMID: 9164157 DOI: 10.1021/ac961226g] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
A novel injection scheme is described in which ultrasmall samples in the attoliter (10(-18) L) and low femtoliter (10(-15) L) range, or even single molecules, are controllably introduced into a tapered capillary so that electrophoretic separation can be carried out. To match the dimensions of the capillary inlet with that of the sample, capillary tips are tapered to an inside diameter ranging from hundreds of nanometers to a few micrometers. To inject an ultrasmall sample, optical trapping is used to immobilize and manipulate the sample in order to place it inside or next to the capillary inlet. A small controlled suction results in the loading of the sample into the capillary.
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Affiliation(s)
- D T Chiu
- Department of Chemistry, Stanford University, California 94305-5080, USA
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Abstract
A wide variety of techniques have been employed for the detection and measurement of neurotransmitter release from biological preparations. Whilst many of these methods offer impressive levels of sensitivity, few are able to combine sensitivity with the necessary temporal and spatial resolution required to study quantal release from single cells. One detection method that is seeing a revival of interest and has the potential to fill this niche is the so-called 'sniffer-patch' technique. In this article, specific examples of the practical aspects of using this technique are discussed along with the procedures involved in calibrating these biosensors to extend their applications to provide quantitative, in addition to simple qualitative, measurements of quantal transmitter release.
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Affiliation(s)
- T G Allen
- Dept of Pharmacology, University College London, UK
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39
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Nie S, Zare RN. Optical detection of single molecules. ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 1997; 26:567-96. [PMID: 9241430 DOI: 10.1146/annurev.biophys.26.1.567] [Citation(s) in RCA: 245] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Recent advances in ultrasensitive instrumentation have allowed for the detection, identification, and dynamic studies of single molecules in the condensed phase. This measurement capability provides a new set of tools for scientists to address important current problems and to explore new frontiers in many scientific disciplines, such as chemistry, molecular biology, molecular medicine, and nanostructured materials. This review focuses on the methodologies and biological applications of single-molecule detection based on laser-induced fluorescence.
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Affiliation(s)
- S Nie
- Department of Chemistry, Indiana University, Bloomington 47405, USA.
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