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Larson VJ, Rico JL, Wolfe LM, Sharvelle S, Prenni J, De Long SK. Composting post-anaerobic digestion for emerging contaminant biodegradation: Impacts of operating conditions. JOURNAL OF ENVIRONMENTAL QUALITY 2023; 52:1152-1165. [PMID: 37729590 DOI: 10.1002/jeq2.20515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 09/11/2023] [Indexed: 09/22/2023]
Abstract
Sustainable manure management technologies are needed, and combining anaerobic digestion (AD) for energy generation and aerobic composting (AC) to stabilize digestate and remove emerging contaminants (ECs), including veterinary pharmaceuticals and steroid hormones, is promising. This study identified post-AD, AC operating conditions that maximized degradation of study ECs, expected to be present in cattle manure digested using treated municipal wastewater as the water source. Study ECs included sulfamethoxazole (SMX), chlortetracycline (CTC), oxytetracycline (OTC), estrone (E1), and naproxen (NPX). Composting conditions were simulated in bench-scale reactors, with microorganisms from digestate produced in an AD system (25L scale), by varying temperatures, pH, and carbon source compositions (representing food waste/manure co-digestion with different residence times). Results indicate maximum SMX biodegradation occurred at 35°C, pH 7, and with high levels of easily degradable carbon (≥99%, 99%, and 98%), and maximum E1 biodegradation occurred at 35°C, and with low levels of easily degradable carbon (≥97% and 99%). Abiotic degradation was responsible for the nearly complete removal of tetracyclines under all conditions and for partial degradation of NPX (between 20% and 48%). Microorganisms originating from the AD system putatively capable of SMX and E1 biodegradation, or of contributing to biodegradation during the AC phase, were identified, including phylotypes previously shown to biodegrade SMX (Brevundimonas and Alcaligenes).
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Affiliation(s)
- Victoria J Larson
- Department of Civil and Environmental Engineering, Colorado State University, Fort Collins, Colorado, USA
| | - Jorge L Rico
- Department of Civil and Environmental Engineering, Colorado State University, Fort Collins, Colorado, USA
| | - Lisa M Wolfe
- Proteomics and Metabolomics Core Facility, Colorado State University, Fort Collins, Colorado, USA
| | - Sybil Sharvelle
- Department of Civil and Environmental Engineering, Colorado State University, Fort Collins, Colorado, USA
| | - Jessica Prenni
- Proteomics and Metabolomics Core Facility, Colorado State University, Fort Collins, Colorado, USA
| | - Susan K De Long
- Department of Civil and Environmental Engineering, Colorado State University, Fort Collins, Colorado, USA
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Lopez-Echartea E, Strejcek M, Mateju V, Vosahlova S, Kyclt R, Demnerova K, Uhlik O. Bioremediation of chlorophenol-contaminated sawmill soil using pilot-scale bioreactors under consecutive anaerobic-aerobic conditions. CHEMOSPHERE 2019; 227:670-680. [PMID: 31022668 DOI: 10.1016/j.chemosphere.2019.04.036] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 02/07/2019] [Accepted: 04/05/2019] [Indexed: 06/09/2023]
Abstract
Chlorophenols (CPs), including pentachlorophenol (PCP), are chemicals of concern due to their toxicity and persistence. Here we describe a successful reactor-based remediation of CP-contaminated soil and assess changes in the toxicity patterns and bacterial communities during the remediation. The remediation consisted of separating half of the contaminated soil to be ground (samples M) in order to test whether the grinding expedited the remediation, the other half was left unground (samples P). Both soils were mixed with wastewater treatment sludge to increase their bacterial diversity and facilitate the degradation of CPs, and the resultant mixtures were placed in 2 bioreactors, M and P, operated for 16 months under anaerobic conditions to favor dehalogenation and for an additional 16 months under aerobic conditions to achieve complete mineralization. Samples were taken every 4 months for toxicity and microbial analyses. The results showed a 64% removal of total CPs (ΣCPs) in reactor P after just 18 months of remediation, whereas similar depletion in reactor M occurred after ∼25 months, indicating that the grinding decelerated the remediation. By the end of the experiment, both reactors achieved 93.5-95% removal. The toxicity tests showed a decrease in toxicity as the remediation progressed. The succession of bacterial communities over time was significantly associated with pH, anaerobic/aerobic phase and the concentration of the majority of CP congeners. Our data indicate that the supplementation of contaminated soil with sludge and further incubation in pilot-scale bioreactors under consecutive anaerobic-aerobic conditions proved to be effective at the remediation of CP-contaminated soil.
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Affiliation(s)
- Eglantina Lopez-Echartea
- Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic
| | - Michal Strejcek
- Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic
| | | | | | | | - Katerina Demnerova
- Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic
| | - Ondrej Uhlik
- Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
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Xiao Y, De Araujo C, Sze CC, Stuckey DC. Controlling a toxic shock of pentachlorophenol (PCP) to anaerobic digestion using activated carbon addition. BIORESOURCE TECHNOLOGY 2015; 181:303-311. [PMID: 25665874 DOI: 10.1016/j.biortech.2015.01.080] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2014] [Revised: 01/16/2015] [Accepted: 01/19/2015] [Indexed: 06/04/2023]
Abstract
Several powdered and granular activated carbons (PACs and GACs) were tested for adsorption of pentachlorophenol (PCP) in bench-scale anaerobic digestion reactors to control the toxicity of PCP to acetoclastic methanogenesis. Results showed that the adsorption capacities of PAC were reduced by 21-54%, depending on the PAC addition time, in the presence of the methanogenic sludge compared to the controls without sludge. As a preventive measure, PAC at a low dose of 20% (mass ratio to the VSS) added 24 h prior to, or simultaneously with, the addition of PCP could completely eliminate the toxic effects of PCP. At the same dose, PAC also enabled methanogenesis to recover immediately after the sludge had been exposed to PCP for 24h. GAC was not effective in enabling the recovery of methanogenesis due to its slow adsorption kinetics; however, at a dose of 80% it could partially ameliorate the toxic shock of PCP.
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Affiliation(s)
- Yeyuan Xiao
- Advanced Environmental Biotechnology Centre, Nanyang Environment and Water Research Institute, Nanyang Technological University, 1 CleanTech Loop, Singapore 637141, Singapore
| | - Cecilia De Araujo
- Advanced Environmental Biotechnology Centre, Nanyang Environment and Water Research Institute, Nanyang Technological University, 1 CleanTech Loop, Singapore 637141, Singapore
| | - Chun Chau Sze
- School of Biological Sciences, Nanyang Technological University, Singapore 637141, Singapore
| | - David C Stuckey
- Advanced Environmental Biotechnology Centre, Nanyang Environment and Water Research Institute, Nanyang Technological University, 1 CleanTech Loop, Singapore 637141, Singapore; Department of Chemical Engineering, Imperial College London, SW7 2AZ, UK.
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Meyer T, Edwards EA. Anaerobic digestion of pulp and paper mill wastewater and sludge. WATER RESEARCH 2014; 65:321-49. [PMID: 25150519 DOI: 10.1016/j.watres.2014.07.022] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2014] [Revised: 06/20/2014] [Accepted: 07/12/2014] [Indexed: 05/28/2023]
Abstract
Pulp and paper mills generate large amounts of waste organic matter that may be converted to renewable energy in form of methane. The anaerobic treatment of mill wastewater is widely accepted however, usually only applied to few selected streams. Chemical oxygen demand (COD) removal rates in full-scale reactors range between 30 and 90%, and methane yields are 0.30-0.40 m(3) kg(-1) COD removed. Highest COD removal rates are achieved with condensate streams from chemical pulping (75-90%) and paper mill effluents (60-80%). Numerous laboratory and pilot-scale studies have shown that, contrary to common perception, most other mill effluents are also to some extent anaerobically treatable. Even for difficult-to-digest streams such as bleaching effluents COD removal rates range between 15 and 90%, depending on the extent of dilution prior to anaerobic treatment, and the applied experimental setting. Co-digestion of different streams containing diverse substrate can level out and diminish toxicity, and may lead to a more robust microbial community. Furthermore, the microbial population has the ability to become acclimated and adapted to adverse conditions. Stress situations such as toxic shock loads or temporary organic overloading may be tolerated by an adapted community, whereas they could lead to process disturbance with an un-adapted community. Therefore, anaerobic treatment of wastewater containing elevated levels of inhibitors or toxicants should be initiated by an acclimation/adaptation period that can last between a few weeks and several months. In order to gain more insight into the underlying processes of microbial acclimation/adaptation and co-digestion, future research should focus on the relationship between wastewater composition, reactor operation and microbial community dynamics. The potential for engineering and managing the microbial resource is still largely untapped. Unlike in wastewater treatment, anaerobic digestion of mill biosludge (waste activated sludge) and primary sludge is still in its infancy. Current research is mainly focused on developing efficient pretreatment methods that enable fast hydrolysis of complex organic matter, shorter sludge residence times and as a consequence, smaller sludge digesters. Previous experimental studies indicate that the anaerobic digestibility of non-pretreated biosludge from pulp and paper mills varies widely, with volatile solids (VS) removal rates of 21-55% and specific methane yields ranging between 40 and 200 mL g(-1) VS fed. Pretreatment can increase the digestibility to some extent, however in almost all reported cases, the specific methane yield of pretreated biosludge did not exceed 200 mL g(-1) VS fed. Increases in specific methane yield mostly range between 0 and 90% compared to non-pretreated biosludge, whereas larger improvements were usually achieved with more difficult-to-digest biosludge. Thermal treatment and microwave treatment are two of the more effective methods. The heat required for the elevated temperatures applied in both methods may be provided from surplus heat that is often available at pulp and paper mills. Given the large variability in specific methane yield of non-pretreated biosludge, future research should focus on the links between anaerobic digestibility and sludge properties. Research should also involve mill-derived primary sludge. Although biosludge has been the main target in previous studies, primary sludge often constitutes the bulk of mill-generated sludge, and co-digestion of a mixture between both types of sludge may become practical. The few laboratory studies that have included mill primary sludge indicate that, similar to biosludge, the digestibility can range widely. Long-term studies should be conducted to explore the potential of microbial adaptation to lignocellulosic material which can constitute more than half of the organic matter in pulp and paper mill sludge.
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Affiliation(s)
- Torsten Meyer
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, 200 College St., ON, Canada M5S3E5.
| | - Elizabeth A Edwards
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, 200 College St., ON, Canada M5S3E5
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Villemur R. The pentachlorophenol-dehalogenating Desulfitobacterium hafniense strain PCP-1. Philos Trans R Soc Lond B Biol Sci 2013; 368:20120319. [PMID: 23479749 DOI: 10.1098/rstb.2012.0319] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
In this report, a complete description of Desulfitobacterium hafniense strain PCP-1 is presented. The D. hafniense strain PCP-1 was isolated from a methanogenic consortium for its capacity to dehalogenate pentachlorophenol (PCP) into 3-chlorophenol. This strain is also capable of dehalogenating several other chloroaromatic compounds and tetrachloroethene into trichloroethene. Four gene loci encoding putative chlorophenol-reductive dehalogenases (CprA2 to CprA5) were detected, and the products of two of these loci have been demonstrated to dechlorinate different chlorinated phenols. Strain PCP-1 was used in laboratory-scale bioprocesses to degrade PCP present in contaminated environments. Desulfitobacterium hafniense PCP-1 is an excellent candidate for the development of efficient bioprocesses to degrade organohalide compounds.
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Affiliation(s)
- Richard Villemur
- INRS institut Armand-Frappier, 531 Boulevard des Prairies, Laval, Quebec, Canada, H7V 1B7.
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Effect of 2,4,6-trichlorophenol on the microbial activity of adapted anaerobic granular sludge bioaugmented with Desulfitobacterium strains. N Biotechnol 2011; 29:79-89. [DOI: 10.1016/j.nbt.2011.06.011] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2011] [Revised: 06/10/2011] [Accepted: 06/13/2011] [Indexed: 11/17/2022]
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Schauer-Gimenez AE, Zitomer DH, Maki JS, Struble CA. Bioaugmentation for improved recovery of anaerobic digesters after toxicant exposure. WATER RESEARCH 2010; 44:3555-64. [PMID: 20427070 DOI: 10.1016/j.watres.2010.03.037] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2009] [Revised: 03/26/2010] [Accepted: 03/31/2010] [Indexed: 05/20/2023]
Abstract
Bioaugmentation was investigated as a method to decrease the recovery period of anaerobic digesters exposed to a transient toxic event. Two sets of laboratory-scale digesters (SRT = 10 days, OLR = 2 g COD/L-day), started with inoculum from a digester stabilizing synthetic municipal wastewater solids (MW) and synthetic industrial wastewater (WW), respectively, were transiently exposed to the model toxicant, oxygen. Bioaugmented digesters received 1.2 g VSS/L-day of an H2-utilizing culture for which the archaeal community was analyzed. Soon after oxygen exposure, the bioaugmented digesters produced 25-60% more methane than non-bioaugmented controls (p < 0.05). One set of digesters produced lingering high propionate concentrations, and bioaugmentation resulted in significantly shorter recovery periods. The second set of digesters did not display lingering propionate, and bioaugmented digesters recovered at the same time as non-bioaugmented controls. The difference in the effect of bioaugmentation on recovery may be due to differences between microbial communities of the digester inocula originally employed. In conclusion, bioaugmentation with an H(2)-utilizing culture is a potential tool to decrease the recovery period, decrease propionate concentration, and increase biogas production of some anaerobic digesters after a toxic event. Digesters already containing rapidly adaptable microbial communities may not benefit from bioaugmentation, whereas other digesters with poorly adaptable microbial communities may benefit greatly.
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Affiliation(s)
- Anne E Schauer-Gimenez
- Department of Civil and Environmental Engineering, Water Quality Center, Marquette University, 1515 W. Wisconsin Ave., Milwaukee, WI 53233, USA
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8
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Biodegradation of aromatic compounds: current status and opportunities for biomolecular approaches. Appl Microbiol Biotechnol 2010; 85:207-28. [PMID: 19730850 DOI: 10.1007/s00253-009-2192-4] [Citation(s) in RCA: 147] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2009] [Revised: 08/05/2009] [Accepted: 08/05/2009] [Indexed: 02/03/2023]
Abstract
Biodegradation can achieve complete and cost-effective elimination of aromatic pollutants through harnessing diverse microbial metabolic processes. Aromatics biodegradation plays an important role in environmental cleanup and has been extensively studied since the inception of biodegradation. These studies, however, are diverse and scattered; there is an imperative need to consolidate, summarize, and review the current status of aromatics biodegradation. The first part of this review briefly discusses the catabolic mechanisms and describes the current status of aromatics biodegradation. Emphasis is placed on monocyclic, polycyclic, and chlorinated aromatic hydrocarbons because they are the most prevalent aromatic contaminants in the environment. Among monocyclic aromatic hydrocarbons, benzene, toluene, ethylbenzene, and xylene; phenylacetic acid; and structurally related aromatic compounds are highlighted. In addition, biofilms and their applications in biodegradation of aromatic compounds are briefly discussed. In recent years, various biomolecular approaches have been applied to design and understand microorganisms for enhanced biodegradation. In the second part of this review, biomolecular approaches, their applications in aromatics biodegradation, and associated biosafety issues are discussed. Particular attention is given to the applications of metabolic engineering, protein engineering, and "omics" technologies in aromatics biodegradation.
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Damianovic MHRZ, Moraes EM, Zaiat M, Foresti E. Pentachlorophenol (PCP) dechlorination in horizontal-flow anaerobic immobilized biomass (HAIB) reactors. BIORESOURCE TECHNOLOGY 2009; 100:4361-4367. [PMID: 19443213 DOI: 10.1016/j.biortech.2009.01.076] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2007] [Revised: 01/06/2009] [Accepted: 01/09/2009] [Indexed: 05/27/2023]
Abstract
This study verifies the potential applicability of horizontal-flow anaerobic immobilized biomass (HAIB) reactors to pentachlorophenol (PCP) dechlorination. Two bench-scale HAIB reactors (R1 and R2) were filled with cubic polyurethane foam matrices containing immobilized anaerobic sludge. The reactors were then continuously fed with synthetic wastewater consisting of PCP, glucose, acetic acid, and formic acid as co-substrates for PCP anaerobic degradation. Before being immobilized in polyurethane foam matrices, the biomass was exposed to wastewater containing PCP in reactors fed at a semi-continuous rate of 2.0 microg PCP g(-1) VS. The applied PCP loading rate was increased from 0.05 to 2.59 mg PCP l(-1)day(-1) for R1, and from 0.06 to 4.15 mg PCP l(-1)day(-1) for R2. The organic loading rates (OLR) were 1.1 and 1.7 kg COD m(-3)day(-1) at hydraulic retention times (HRT) of 24h for R1 and 18 h for R2. Under such conditions, chemical oxygen demand (COD) removal efficiencies of up to 98% were achieved in the HAIB reactors. Both reactors exhibited the ability to remove 97% of the loaded PCP. Dichlorophenol (DCP) was the primary chlorophenol detected in the effluent. The adsorption of PCP and metabolites formed during PCP degradation in the packed bed was negligible for PCP removal efficiency.
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Affiliation(s)
- M H R Z Damianovic
- Laboratório de Processos Biológicos, Escola de Engenharia de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil
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Sharma A, Thakur IS, Dureja P. Enrichment, isolation and characterization of pentachlorophenol degrading bacterium Acinetobacter sp. ISTPCP-3 from effluent discharge site. Biodegradation 2009; 20:643-50. [DOI: 10.1007/s10532-009-9251-5] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2009] [Accepted: 01/28/2009] [Indexed: 11/30/2022]
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Baraldi EA, Damianovic MHRZ, Manfio GP, Foresti E, Vazoller RF. Performance of a horizontal-flow anaerobic immobilized biomass (HAIB) reactor and dynamics of the microbial community during degradation of pentachlorophenol (PCP). Anaerobe 2008; 14:268-74. [PMID: 18992351 DOI: 10.1016/j.anaerobe.2008.09.004] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2008] [Revised: 06/21/2008] [Accepted: 09/23/2008] [Indexed: 11/17/2022]
Abstract
The anaerobic biological treatment of pentachlorophenol (PCP) and methanol as the main carbon source was investigated in a horizontal-flow anaerobic immobilized biomass (HAIB) reactor at 30+/-1 degrees C, during a 220-day trial period. The reactor biomass was developed as an attached biofilm on polyurethane foam particles, with 24h of hydraulic retention time. The PCP concentrations, which ranged from 2.0 to 13.0 mg/L, were controlled by adding synthetic substrate. The HAIB reactor reduced 97% of COD and removed 99% of PCP. The microbial biofilm communities of the HAIB reactor amended with PCP, without previous acclimatization, were characterized by polymerase chain reaction (PCR) and amplified ribosomal DNA restriction analysis (ARDRA) with specific Archaea oligonucleotide primers. The ARDRA technique provided an adequate analysis of the community, revealing the profile of the selected population along the reactor. The biomass activities in the HAIB reactor at the end of the experiments indicated the development of PCP degraders and the maintenance of the population of methanogenic Archaea, ensuring the high efficiency of the system treating PCP with added methanol as the cosubstrate. The use of the simplified ARDRA method enabled us to monitor the microbial population with the addition of high concentrations of toxic compounds and highlighting a selection of microorganisms in the biofilm.
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Affiliation(s)
- Elizabeth A Baraldi
- Laboratório de Processos Biológicos, Escola de Engenharia de São Carlos, Universidade de São Paulo, São Carlos - SP, Brazil
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Sharma A, Thakur IS. Characterization of pentachlorophenol degrading bacterial consortium from chemostat. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2008; 81:12-18. [PMID: 18500664 DOI: 10.1007/s00128-008-9437-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2007] [Accepted: 04/14/2008] [Indexed: 05/26/2023]
Abstract
A microbial consortium was developed by continuous enrichment of bacterial population isolated from sediment core of pulp and paper mill effluent in mineral salts medium (MSM) supplemented with pentachlorophenol (PCP) as sole source of carbon and energy in the chemostat. The enriched consortium contained three bacterial strains identified as Escherichia coli (PCP1), Pseudomonas aeruginosa (PCP2) and Acinetobacter sp. (PCP3) by morphological and biochemical tests, further confirmation was done using 16S rDNA sequence analysis. The potency of bacterial isolates in degradation of PCP was monitored in terms of growth and utilization of PCP as substrate with spectrophotometer and gas chromatograph-mass spectrometer (GC-MS) analysis. The strains were tested for their utilization of various organic compounds. The strain PCP3, showed higher potency to utilize PCP as sole source of carbon and energy than PCP1 and PCP2. The bacterial strain were able to utilize PCP through an oxidative and reductive route as indicated with the formation of tetrachloro-p-hydroquinone (TeCH), 2-chloro-1,4-benzenediol and 2,3,4,6-tetrachlorophenol, respectively.
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Affiliation(s)
- Ashwani Sharma
- Environmental Biotechnology Laboratory, School of Environmental Sciences, Jawaharlal Nehru University, New Mehrauli Road, New Delhi 110 067, India.
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Hiraishi A. Biodiversity of Dehalorespiring Bacteria with Special Emphasis on Polychlorinated Biphenyl/Dioxin Dechlorinators. Microbes Environ 2008; 23:1-12. [DOI: 10.1264/jsme2.23.1] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Akira Hiraishi
- Department of Ecological Engineering, Toyohashi University of Technology
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Breitenstein A, Andreesen JR, Lechner U. Analysis of an Anaerobic Chemostat Population Stably Dechlorinating 2,4,6-Trichlorophenol. Eng Life Sci 2007. [DOI: 10.1002/elsc.200720205] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
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Abstract
Desulfitobacterium spp. are strictly anaerobic bacteria that were first isolated from environments contaminated by halogenated organic compounds. They are very versatile microorganisms that can use a wide variety of electron acceptors, such as nitrate, sulfite, metals, humic acids, and man-made or naturally occurring halogenated organic compounds. Most of the Desulfitobacterium strains can dehalogenate halogenated organic compounds by mechanisms of reductive dehalogenation, although the substrate spectrum of halogenated organic compounds varies substantially from one strain to another, even with strains belonging to the same species. A number of reductive dehalogenases and their corresponding gene loci have been isolated from these strains. Some of these loci are flanked by transposition sequences, suggesting that they can be transmitted by horizontal transfer via a catabolic transposon. Desulfitobacterium spp. can use H2 as electron donor below the threshold concentration that would allow sulfate reduction and methanogenesis. Furthermore, there is some evidence that syntrophic relationships occur between Desulfitobacterium spp. and sulfate-reducing bacteria, from which the Desulfitobacterium cells acquire their electrons by interspecies hydrogen transfer, and it is believed that this relationship also occurs in a methanogenic consortium. Because of their versatility, desulfitobacteria can be excellent candidates for the development of anaerobic bioremediation processes. The release of the complete genome of Desulfitobacterium hafniense strain Y51 and information from the partial genome sequence of D. hafniense strain DCB-2 will certainly help in predicting how desulfitobacteria interact with their environments and other microorganisms, and the mechanisms of actions related to reductive dehalogenation.
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Garibay-Orijel C, Hoyo-Vadillo C, Ponce-Noyola T, García-Mena J, Poggi-Varaldo HM. Impact of long-term partial aeration on the removal of 2,4,6-trichlorophenol in an initially methanogenic fluidized bed bioreactor. Biotechnol Bioeng 2006; 94:949-60. [PMID: 16586508 DOI: 10.1002/bit.20918] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
A fluidized bed bioreactor (FBBR) was operated for more than 1000 days under two regimes, Methanogenic (M) and Methanogenic-Aerobic (M-A), to remove 2,4,6-trichlorophenol (TCP) and phenol (Phe) from a synthetic wastewater, containing different amounts of TCP and Phe, using different aeration flow-rates (0, 2.13, and 1.06 NL O(2)/L.day). M conditions (80:20 mg/L of TCP:Phe, 0 NL O(2)/L.day) showed similar TCP and Phe removal (>95%). Nevertheless accumulation of 4-chlorophenol (4CP) up to 16 mg/L and Phe up to 4 mg/L was observed, while in M-A conditions (80:20 mg/L of TCP:Phe, 2.13 NL O(2)/L.day) TCP and Phe removal achieved 99.9(+)% and after 70 days no accumulation of intermediates were detected. The increase of TCP and Phe in the influent under M-A conditions from 80:20 to 120:30 mg/L of TCP:Phe did not negatively affect the removal of TCP, intermediates and Phe; in fact, they were similar to those in previous M-A conditions. The decrease in the oxygen flow rate from 2.13 to 1.06 NL O(2)/L.day had no negative effect on pollutant removals, which were as high as in previous two M-A conditions. The specific methanogenic activity of bioparticles of the fluidized bed decreased with long-term partial aeration, starting from 1.097 mmol CH(4)/h.g(TKN) in the M regime (day 60) to <0.02 mmolCH(4)/h.g(TKN) at day 1050, suggesting aerobic regime in the bioreactor rather than an M-A regime. In conclusion, complete removal of TCP and less chlorinated intermediates could be achieved in an initially methanogenic FBBR under conditions of partial aeration, although long-term operation seemed to negatively affect the methanogenic activity of biomass. It is also likely that after extended aeration the microbial community was finally enriched with strains with the ability to attack 2,4,6-TCP under aerobic conditions. This report represents the first evidence of a long exposure to oxygen of an anaerobic microbial consortium that efficiently remove TCP.
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Zhang J, Joslyn AP, Chiu PC. 1,1-dichloroethene as a predominant intermediate of microbial trichloroethene reduction. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2006; 40:1830-6. [PMID: 16570604 DOI: 10.1021/es051829m] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
A microbial culture derived from a landfill site in Dover, DE consistently reduced trichloroethene (TCE) to ethene through 1,1-dichloroethene (DCE) as a dominant intermediate in the presence of ampicillin. A constant 1,1-DCE-to-cis-DCE ratio of 2.4 +/- 0.3 was observed for more than two years, while trans-DCE was never detected. Without ampicillin, however, TCE was reduced to ethene almost exclusively through cis-DCE, suggesting that the culture contained at leasttwo TCE-dechlorinating populations. Two subcultures, which were established using 1,1-DCE or vinyl chloride as an electron acceptor, exhibited the same 1,1-DCE-to-cis-DCE ratio when TCE was introduced. PCR amplification of 16S rRNA gene followed by sequencing and DGGE analysis indicate that these (sub)cultures contained a Dehalococcoides population(s). TCE dechlorination assays with crude cell extract showed a DCE distribution pattern similar to that with whole cells. The enzyme involved in 1,1-DCE formation was likely a cobalt corrinoid enzyme, as suggested by the inhibitory effect of CH3I and photoreversibility of the inhibition. This study provides a possible biological mechanism forthe occurrence of 1,1-DCE in TCE-contaminated sites.
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Affiliation(s)
- Jingling Zhang
- Department of Civil and Environmental Engineering, University of Delaware, Newark, Delaware 19716, USA
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Inoue D, Wada K, Sei K, Ike M, Fujita M. Comparative Evaluation of Quantitative Polymerase Chain Reaction Methods for Routine Enumeration of Specific Bacterial DNA in Aquatic Samples. World J Microbiol Biotechnol 2005. [DOI: 10.1007/s11274-004-7868-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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19
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Kao CM, Liu JK, Chen YL, Chai CT, Chen SC. Factors affecting the biodegradation of PCP by Pseudomonas mendocina NSYSU. JOURNAL OF HAZARDOUS MATERIALS 2005; 124:68-73. [PMID: 15979238 DOI: 10.1016/j.jhazmat.2005.03.051] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2004] [Revised: 02/22/2005] [Accepted: 03/26/2005] [Indexed: 05/03/2023]
Abstract
A pentachlorophenol (PCP) degrading bacterium was isolated from PCP-contaminated soils and identified as Pseudomonas mendocina NSYSU (P. mendocina NSYSU). The main objectives of this study were to (1) clarify the factors affecting the ability and efficiency of PCP biodegradation by P. mendocina NSYSU, and (2) optimize the use of this bacterium in bioremediation of PCP. Microcosm experiments were conducted to fulfill the objectives. In batch cultures, P. mendocina NSYSU used PCP as its sole source of carbon and energy and was capable of completely degrading this compound. This was confirmed by the stoichiometric release of chloride ion. Moreover, P. mendocina NSYSU was able to mineralize a high concentration of PCP (150 mg/L). Results from the oxygen concentration experiment reveal that the growth of P. mendocina NSYSU was inhibited under low oxygen and anaerobic conditions. Results indicate that the optimal growth conditions for P. mendocina NSYSU include the following: slightly acidic (6<pH<7), aerobic, and relatively moderate ambient temperature (20 degrees C<temperature<30 degrees C) conditions. Addition of extra carbon sources (sodium acetate and glucose) could not enhance the PCP biodegradation. No PCP byproducts were detected after eight days of incubation in this study. This suggests that P. mendocina NSYSU is able to effectively biodegrade PCP and its biodegradation byproducts without the accumulation of inhibitory toxic compounds. Results from this study could be used to assist the optimization of its use in bioremediation of PCP.
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Affiliation(s)
- C M Kao
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan
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20
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Lanthier M, Juteau P, Lépine F, Beaudet R, Villemur R. Desulfitobacterium hafniense is present in a high proportion within the biofilms of a high-performance pentachlorophenol-degrading, methanogenic fixed-film reactor. Appl Environ Microbiol 2005; 71:1058-65. [PMID: 15691966 PMCID: PMC546785 DOI: 10.1128/aem.71.2.1058-1065.2005] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
We developed a pentachlorophenol (PCP)-degrading, methanogenic fixed-film reactor by using broken granular sludge from an upflow anaerobic sludge blanket reactor. This methanogenic consortium was acclimated with increasing concentrations of PCP. After 225 days of acclimation, the reactor was performing at a high level, with a PCP removal rate of 1,173 muM day(-1), a PCP removal efficiency of up to 99%, a degradation efficiency of approximately 60%, and 3-chlorophenol as the main chlorophenol residual intermediate. Analyses by PCR-denaturing gradient gel electrophoresis (DGGE) showed that Bacteria and Archaea in the reactor stabilized in the biofilms after 56 days of operation. Important modifications in the profiles of Bacteria between the original granular sludge and the reactor occurred, as less than one-third of the sludge DGGE bands were still present in the reactor. Fluorescence in situ hybridization experiments with probes for Archaea or Bacteria revealed that the biofilms were composed mostly of Bacteria, which accounted for 70% of the cells. With PCR species-specific primers, the presence of the halorespiring bacterium Desulfitobacterium hafniense in the biofilm was detected very early during the reactor acclimation period. D. hafniense cells were scattered in the biofilm and accounted for 19% of the community. These results suggest that the presence of PCP-dehalogenating D. hafniense in the biofilm was crucial for the performance of the reactor.
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Affiliation(s)
- M Lanthier
- INRS-Institut Armand-Frappier, 531 Boul. des Prairies, Laval, Québec, Canada H7V 1B7
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21
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Zhang C, Bennett GN. Biodegradation of xenobiotics by anaerobic bacteria. Appl Microbiol Biotechnol 2005; 67:600-18. [PMID: 15672270 DOI: 10.1007/s00253-004-1864-3] [Citation(s) in RCA: 74] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2004] [Revised: 11/29/2004] [Accepted: 11/30/2004] [Indexed: 10/25/2022]
Abstract
Xenobiotic biodegradation under anaerobic conditions such as in groundwater, sediment, landfill, sludge digesters and bioreactors has gained increasing attention over the last two decades. This review gives a broad overview of our current understanding of and recent advances in anaerobic biodegradation of five selected groups of xenobiotic compounds (petroleum hydrocarbons and fuel additives, nitroaromatic compounds and explosives, chlorinated aliphatic and aromatic compounds, pesticides, and surfactants). Significant advances have been made toward the isolation of bacterial cultures, elucidation of biochemical mechanisms, and laboratory and field scale applications for xenobiotic removal. For certain highly chlorinated hydrocarbons (e.g., tetrachlorethylene), anaerobic processes cannot be easily substituted with current aerobic processes. For petroleum hydrocarbons, although aerobic processes are generally used, anaerobic biodegradation is significant under certain circumstances (e.g., O(2)-depleted aquifers, oil spilled in marshes). For persistent compounds including polychlorinated biphenyls, dioxins, and DDT, anaerobic processes are slow for remedial application, but can be a significant long-term avenue for natural attenuation. In some cases, a sequential anaerobic-aerobic strategy is needed for total destruction of xenobiotic compounds. Several points for future research are also presented in this review.
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Affiliation(s)
- Chunlong Zhang
- Department of Environmental Sciences, University of Houston-Clear Lake, Houston, TX 77058, USA
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Kao CM, Chai CT, Liu JK, Yeh TY, Chen KF, Chen SC. Evaluation of natural and enhanced PCP biodegradation at a former pesticide manufacturing plant. WATER RESEARCH 2004; 38:663-672. [PMID: 14723935 DOI: 10.1016/j.watres.2003.10.030] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2003] [Revised: 10/20/2003] [Accepted: 10/30/2003] [Indexed: 05/24/2023]
Abstract
Pentachlorophenol (PCP) has been used in the past as a pesticide, herbicide, antifungal agent, bactericide, and wood preservative. Thus, PCP is among the most ubiquitous chlorinated compounds found in groundwater contamination. A former pesticide manufacturing plant located in southern Taiwan has been identified as a PCP spill site. In this study, groundwater samples collected from the PCP site were analyzed to assess the occurrence of natural PCP biodegradation. Microcosm experiments were conducted to (1) evaluate the feasibility of biodegrading PCP by indigenous microbial consortia under aerobic and cometabolic conditions, and (2) determine the potential of enhancing PCP biodegradation using cane molasses and biological sludge cake as the substitute primary substrates under cometabolic conditions. The inocula used in this microcosm study were aquifer sediments collected from the PCP site and activated sludges collected from the municipal and industrial wastewater treatment plants. Results from this field investigation indicate that the natural biodegradation of PCP is occurring and causing the decrease in PCP concentration. Microcosm results show that the indigenous microorganisms can biodegrade PCP under both aerobic and aerobic cometabolism conditions. A PCP-degrading bacterium was isolated from the collected aquifer sediments and identified as Pseudomonas mendocina NSYSU via some biochemical tests and further conformation of DNA sequencing. In batch cultures, P. mendocina NSYSU used PCP as its sole source of carbon and energy. The isolated bacterium, P. mendocina NSYSU, was capable of completely degrading PCP as indicated by the increase in biomass formation with the decrease in PCP concentrations occurred in the carbon-free medium simultaneously. Results indicate that the in situ or on-site aerobic bioremediation using indigenous microorganisms or inoculated bacteria would be a feasible technology to clean up the studied PCP-contaminated site. Results from this study will be useful in designing a scale-up in situ or on-site PCP bioremediation system (e.g., on-site bioreactor) for field application.
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Affiliation(s)
- C M Kao
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan
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Vallero MVG, Sipma J, Lettinga G, Lens PNL. High-rate sulfate reduction at high salinity (up to 90 mS.cm?1) in mesophilic UASB reactors. Biotechnol Bioeng 2004; 86:226-35. [PMID: 15052643 DOI: 10.1002/bit.20040] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Sulfate reduction in salt-rich wastewaters using unadapted granular sludge was investigated in 0.9 L UASB reactors (pH 7.0 +/- 0.2; hydraulic retention time from 8-14 h) fed with acetate, propionate, or ethanol at organic loading rates up to 10 gCOD x L(-1) x day(-1) and in excess sulfate (COD/SO(4) (2-) of 0.5). High-rate sulfate reduction rates (up to 3.7 gSO(4) (2-) x L(-1).day(-1)) were achieved at salinities exceeding 50 gNaCl.L(-1) and 1 gMgCl(2) x L(-1). Sulfate reduction proceeded at a salinity of up to 70 gNaCl x L(-1) and 1 gMgCl(2) x L(-1) (corresponding to a conductivity of about 85-90 mS x cm(-1)), although at lower rates compared to a conductivity of 60-70 mS x cm(-1). Ethanol as well as propionate were suitable substrates for sulfate reduction, with acetate and sulfide as the end products. The successful high-rate treatment was due to the proliferation of a halotolerant incomplete oxidizing SRB population present in the unadapted inoculum sludge. Bioaugmentation of this sludge with the acetate oxidizing halotolerant SRB Desulfobacter halotolerans was unsuccessful, as the strain washed out from the UASB reactor without colonizing the UASB granules.
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Affiliation(s)
- Marcus V G Vallero
- Sub-department of Environmental Technology, Wageningen University, "Biotechnion" - Bomenweg 2, PO Box 8129, 6700 EV Wageningen, The Netherlands
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Tartakovsky B, Manuel MF, Guiot SR. Trichloroethylene degradation in a coupled anaerobic/aerobic reactor oxygenated using hydrogen peroxide. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2003; 37:5823-5828. [PMID: 14717201 DOI: 10.1021/es030340v] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
In this work, trichloroethylene (TCE) degradation under combined anaerobic-aerobic conditions was studied in an ethanol-fed biofilm reactor oxygenated using hydrogen peroxide. The reactor was inoculated with a biomass originating from an anaerobic digestor. Granulated peat was added to the reactor as a substratum for biofilm development. Extensive characterization of reactor populations using activity tests and PCR analysis revealed the development of a mutualistic consortium, particularly methanotrophic and methanogenic microorganisms. This consortium was shown to degrade TCE by a combination of reductive and oxidative pathways. A near complete degradation of TCE at a load of 18 mg L(R)(-1) day(-1) was evidenced by a stoichiometric release of inorganic chloride.
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Affiliation(s)
- B Tartakovsky
- Biotechnology Research Institute, NRC, 6100 Royalmount Avenue, Montreal, Quebec, Canada H4P 2A2
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Mogensen AS, Dolfing J, Haagensen F, Ahring BK. Potential for anaerobic conversion of xenobiotics. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2003; 82:69-134. [PMID: 12747566 DOI: 10.1007/3-540-45838-7_3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
Abstract
This review covers the latest research on the anaerobic biodegradation of aromatic xenobiotic compounds, with emphasis on surfactants, polycyclic aromatic hydrocarbons, phthalate esters, polychlorinated biphenyls, halogenated phenols, and pesticides. The versatility of anaerobic reactor systems regarding the treatment of xenobiotics is shown with the focus on the UASB reactor, but the applicability of other reactor designs for treatment of hazardous waste is also included. Bioaugmentation has proved to be a viable technique to enhance a specific activity in anaerobic reactors and recent research on reactor and in situ bioaugmentation is reported.
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Affiliation(s)
- A S Mogensen
- BioCentrum-DTU, Building 227, The Technical University of Denmark, 2800 Lyngby, Denmark.
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Satoh H, Okabe S, Yamaguchi Y, Watanabe Y. Evaluation of the impact of bioaugmentation and biostimulation by in situ hybridization and microelectrode. WATER RESEARCH 2003; 37:2206-2216. [PMID: 12691906 DOI: 10.1016/s0043-1354(02)00617-6] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Three rotating disk biofilm reactors were operated to evaluate whether bioaugmentation and biostimulation can be used to improve the start-up of microbial nitrification. The first reactor was bioaugmented during start-up period with an enrichment culture of nitrifying bacteria, the second reactor received a synthetic medium containing NH(4)(+) and NO(2)(-) to facilitate concomitant proliferation of ammonia- and nitrite-oxidizing bacteria, and the third reactor was used as a control. To evaluate the effectiveness of bioaugmentation and biostimulation approaches, time-dependent developments of nitrifying bacterial community and in situ nitrifying activity in biofilms were monitored by fluorescence in situ hybridization (FISH) technique and microelectrode measurements of NH(4)(+), NO(2)(-), NO(3)(-), and O(2). In situ hybridization results revealed that addition of the enrichment culture of nitrifying bacteria significantly facilitated development of dense nitrifying bacterial populations in the biofilm shortly after, which led to a rapid start-up and enhancement of in situ nitrification activity. The inoculated bacteria could proliferate and/or survive in the biofilm. In addition, the addition of nitrifying bacteria increased the abundance of nitrifying bacteria in the surface of the biofilm, resulting in the higher nitrification rate. On the other hand, the addition of 2.1mM NO(2)(-) did not stimulate the growth of nitrite-oxidizing bacteria and did inhibit the proliferation of ammonia-oxidizing bacteria instead. Thus, the start-up of NO(2)(-) oxidation was unchanged, and the start-up of NH(4)(+) oxidation was delayed. In all the three biofilm reactors, data sets of time series analyses on population dynamics of nitrifying bacteria determined by FISH, in situ nitrifying activities determined by microelectrode measurements, and the reactor performances revealed an approximate agreement between the appearance of nitrifying bacteria and the initiation of nitrification activity, suggesting that the combination of these techniques was a very powerful monitoring tool to evaluate the effectiveness of bioaugmentation and biostimulation strategies.
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Affiliation(s)
- Hisashi Satoh
- Department of Environmental and Civil Engineering, Hachinohe Institute of Technology, Aomori 031-8501, Japan
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Lanthier M, Tartakovsky B, Villemur R, DeLuca G, Guiot SR. Microstructure of anaerobic granules bioaugmented with Desulfitobacterium frappieri PCP-1. Appl Environ Microbiol 2002; 68:4035-43. [PMID: 12147505 PMCID: PMC124018 DOI: 10.1128/aem.68.8.4035-4043.2002] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Oligonucleotide probes were used to study the structure of anaerobic granular biofilm originating from a pentachlorophenol-fed upflow anaerobic sludge bed reactor augmented with Desulfitobacterium frappieri PCP-1. Fluorescence in situ hybridization demonstrated successful colonization of anaerobic granules by strain PCP-1. Scattered microcolonies of strain PCP-1 were detected on the biofilm surface after 3 weeks of reactor operation, and a dense outer layer of strain PCP-1 was observed after 9 weeks. Hybridization with probes specific for Eubacteria and Archaea probes showed that Eubacteria predominantly colonized the outer layer, while Archaea were observed in the granule interior. Mathematical simulations showed a distribution similar to that observed experimentally when using a specific growth rate of 2.2 day(-1) and a low bacterial diffusion of 10(-7) dm(2) day(-1). Also, the simulations showed that strain PCP-1 proliferation in the outer biofilm layer provided excellent protection of the biofilm from pentachlorophenol toxicity.
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Affiliation(s)
- M Lanthier
- INRS-Institut Armand-Frappier, Laval, Québec, Canada H7V 1B7
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Bioremediation of compounds hazardous to health and the environment: An overview. ACTA ACUST UNITED AC 2002. [DOI: 10.1016/s0079-6352(02)80005-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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30
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Lanthier M, Villemur R, Lépine F, Bisaillon JG, Beaudet R. Geographic distribution of Desulfitobacterium frappieri PCP-1 and Desulfitobacterium spp. in soils from the province of Quebec, Canada. FEMS Microbiol Ecol 2001; 36:185-191. [PMID: 11451523 DOI: 10.1111/j.1574-6941.2001.tb00839.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The presence of indigenous Desulfitobacterium species in 44 soil samples taken from various sites in the southern part of the province of Quebec (Canada) and four from locations outside Quebec was investigated. Twenty-four of these soils were sampled from contaminated industrial sites. Indigenous Desulfitobacterium bacteria from soil samples were enriched by cultivation in anaerobic soil slurry culture. Total DNA was then extracted from these slurries and polymerase chain reaction (PCR) amplifications were performed with primers targeting 16S ribosomal RNA gene sequences of Desulfitobacterium spp. and of Desulfitobacterium frappieri PCP-1. A positive PCR signal was obtained in 31 soil slurry cultures. Resolution of single-strand DNAs of some of the PCR products by a single-strand conformational polymorphism protocol suggests that more than one species of Desulfitobacterium were present in the corresponding slurry cultures. These results suggest that Desulfitobacterium are ubiquitous in soils in the province of Quebec, especially in soils from the St. Lawrence valley and the southern part of the province.
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Affiliation(s)
- M Lanthier
- INRS-Institut Armand-Frappier-Microbiologie et Biotechnologie, Université du Québec, 531 boul. des Prairies, H7V 1B7, Laval, QC, Canada
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31
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Tartakovsky B, Manuel MF, Beaumier D, Greer CW, Guiot SR. Enhanced selection of an anaerobic pentachlorophenol-degrading consortium. Biotechnol Bioeng 2001; 73:476-83. [PMID: 11344452 DOI: 10.1002/bit.1082] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
A rapid enrichment approach based on a pentachlorophenol (PCP) feeding strategy which linked the PCP loading rate to methane production was applied to an upflow anaerobic sludge bed reactor inoculated with anaerobic sludge. Due to this strategy, over a 140-day experimental period the PCP volumetric load increased from 2 to 65 mg L(R)(-1) day(-1) with a near zero effluent concentration of PCP. Dechlorination dynamics featured sequential appearance of 3,4,5-chlorophenol, 3,5-chloro- phenol, and 3-chlorophenol in the reactor effluent. Profiling of the reactor population by denaturing gradient gel electrophoresis (DGGE) revealed a correlation between the appearance of dechlorination intermediates and bands on the DGGE profile. Nucleotide sequencing of newly detected 16S rDNA fragments suggested the proliferation of Clostridium and Syntrophobacter/Syntrophomonas spp. in the reactor during PCP degradation. Published by John Wiley & Sons, Inc.
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Affiliation(s)
- B Tartakovsky
- Biotechnology Research Institute, NRC, 6100 Royalmount Ave, Montreal, Quebec, Canada H4P 2A2
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32
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Lanthier M, Villemur R, Lépine F, Bisaillon JG, Beaudet R. Monitoring of Desulfitobacterium frappieri PCP-1 in pentachlorophenol-degrading anaerobic soil slurry reactors. Environ Microbiol 2000; 2:703-8. [PMID: 11214803 DOI: 10.1046/j.1462-2920.2000.00144.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Anaerobic biodegradation of pentachlorophenol (PCP) was studied in rotative bioreactors containing 200 g of PCP-contaminated soil and 250 ml of liquid medium. Reactors were bioaugmented with cells of Desulfitobacterium frappieri strain PCP-1, a bacterium able to dehalogenate PCP to 3-chlorophenol. Cells of strain PCP-1 were detected by quantitative PCR for at least 21 days in reactors containing 500 mg of PCP per kg of soil but disappeared after 21 days in reactors with 750 mg of PCP per kg of soil. Generally, PCP was completely removed in less than 9 days in soils contaminated with 189 mg of PCP per kg of soil. Sorption of PCP to soil organic matter reduced its toxicity and enhanced the survival of strain PCP-1. In some non-inoculated reactors, the indigenous microorganisms of some soils were also able to degrade PCP. These results suggest that anaerobic dechlorination of PCP in soils by indigenous PCP-degrading bacteria, or after augmentation with D. frappieri PCP-1, should be possible in situ and ex situ when the conditions are favourable for the survival of the degrading microorganisms.
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Affiliation(s)
- M Lanthier
- INRS-Institut Armand-Frappier, Centre de Microbiologie et Biotechnologie, Université du Québec, Ville de Laval, Canada
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Abstract
Recently, a rapidly increasing number of bacteria has been isolated that is able to couple the reductive dehalogenation of various halogenated aromatic and aliphatic compounds like chlorophenols and tetrachloroethene to energy conservation by electron-transport-coupled phosphorylation. The potential of these halorespiring bacteria for innovative clean-up strategies of polluted anoxic environments has greatly stimulated efforts to unravel the molecular basis of the novel respiratory chains they possess. The thorough characterization of halorespiratory key components at the physiological, biochemical and molecular genetic level has revealed both structural and functional similarity of chloroaryl- and chloroalkyl-respiratory chains from different phylogenetically distinct microorganisms. The reductive dehalogenases from halorespiring bacteria were found to comprise a novel class of corrinoid-containing Fe/S-proteins. Sensitive molecular methods for monitoring both presence and fate of halorespiring bacteria have been developed, which will be instrumental for the design and maintenance of optimised in situ bioremediation processes.
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