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Brzozowska E, Pyra A, Pawlik K, Janik M, Górska S, Urbańska N, Drulis-Kawa Z, Gamian A. Hydrolytic activity determination of Tail Tubular Protein A of Klebsiella pneumoniae bacteriophages towards saccharide substrates. Sci Rep 2017; 7:18048. [PMID: 29273737 PMCID: PMC5741709 DOI: 10.1038/s41598-017-18096-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Accepted: 12/06/2017] [Indexed: 01/26/2023] Open
Abstract
In this paper, the enzymatic activity, substrate specificity and antibiofilm feature of bacteriophage dual-function tail proteins are presented. So far, tail tubular proteins A–TTPAgp31 and TTPAgp44-have been considered as structural proteins of Klebsiella pneumoniae bacteriophages KP32 and KP34, respectively. Our results show that TTPAgp31 is able to hydrolyze maltose as well as Red-starch. The activity of 1 µM of the protein was calculated as 47.6 milli-Units/assay relating to the α-amylase activity. It degrades capsular polysaccharides (cPS), slime polysaccharides (sPS) and lipopolysaccharide (LPS) of K. pneumoniae PCM 2713 and shows antibiofilm reactivity towards S. aureus PCM 519 and E. faecalis PCM 2673. TTPAgp44 hydrolyses trehalose and cPS of E. faecium PCM 1859. TTPAgp44′s activity was also observed in the antibiofilm test against P. aeruginosa PCM 2710 and B. subtilis PCM 2021. TTPAgp31 has been identified as α-1,4-glucosidase whereas, TTPAgp44 exhibits trehalase-like activity. Both proteins contain aspartate and glutamate residues in the β-stranded region which are essential for catalytic activity of glycoside hydrolases. The significant novelty of our results is that for the first time the bacteriophage tubular proteins are described as the unique enzymes displaying no similarity to any known phage hydrolases. They can be used as antibacterial agents directed against bacterial strains producing exopolysaccharides and forming a biofilm.
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Affiliation(s)
- Ewa Brzozowska
- Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl, 53-114, Wroclaw, Poland.
| | - Anna Pyra
- Faculty of Chemistry, Department of Crystallography, University of Wroclaw, 14 F. Joliot-Curie, 50-383, Wroclaw, Poland.
| | - Krzysztof Pawlik
- Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl, 53-114, Wroclaw, Poland
| | - Monika Janik
- Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl, 53-114, Wroclaw, Poland
| | - Sabina Górska
- Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl, 53-114, Wroclaw, Poland
| | - Natalia Urbańska
- Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl, 53-114, Wroclaw, Poland.,Department of Biological Science, University of Wroclaw, 35 Kuznicza, 50-138, Wroclaw, Poland
| | - Zuzanna Drulis-Kawa
- Department of Pathogen Biology and Immunology, Institute of Genetics and Microbiology, University of Wroclaw, 63-77 Przybyszewskiego, 51-148, Wroclaw, Poland
| | - Andrzej Gamian
- Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 R. Weigl, 53-114, Wroclaw, Poland.,Wroclaw Research Center EIT+, 147 Stablowicka, 54-066, Wroclaw, Poland
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Kern T, Giffard M, Hediger S, Amoroso A, Giustini C, Bui NK, Joris B, Bougault C, Vollmer W, Simorre JP. Dynamics Characterization of Fully Hydrated Bacterial Cell Walls by Solid-State NMR: Evidence for Cooperative Binding of Metal Ions. J Am Chem Soc 2010; 132:10911-9. [DOI: 10.1021/ja104533w] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Thomas Kern
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Mathilde Giffard
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Sabine Hediger
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Ana Amoroso
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Cécile Giustini
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Nhat Khai Bui
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Bernard Joris
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Catherine Bougault
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Waldemar Vollmer
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
| | - Jean-Pierre Simorre
- Institut de Biologie Structurale, UMR5075 (CEA/CNRS/UJF), 38027 Grenoble, France, Laboratoire de Chimie Inorganique et Biologique, UMR-E3 (CEA/UJF), FRE3200 (CEA/CNRS), INAC, CEA, 38054 Grenoble, France, Centre d’ingénierie des protéines, Institut de Chimie B6A, Université de Liège, Sart-Tilman, B4000 Liège, Belgium, and Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne NE2 4AX, United Kingdom
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