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Lettau E, Lorent C, Appel J, Boehm M, Cordero PRF, Lauterbach L. Insights into electron transfer and bifurcation of the Synechocystis sp. PCC6803 hydrogenase reductase module. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2024; 1866:149508. [PMID: 39245309 DOI: 10.1016/j.bbabio.2024.149508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2024] [Revised: 09/03/2024] [Accepted: 09/04/2024] [Indexed: 09/10/2024]
Abstract
The NAD+-reducing soluble [NiFe] hydrogenase (SH) is the key enzyme for production and consumption of molecular hydrogen (H2) in Synechocystis sp. PCC6803. In this study, we focused on the reductase module of the SynSH and investigated the structural and functional aspects of its subunits, particularly the so far elusive role of HoxE. We demonstrated the importance of HoxE for enzyme functionality, suggesting a regulatory role in maintaining enzyme activity and electron supply. Spectroscopic analysis confirmed that HoxE and HoxF each contain one [2Fe2S] cluster with an almost identical electronic structure. Structure predictions, alongside experimental evidence for ferredoxin interactions, revealed a remarkable similarity between SynSH and bifurcating hydrogenases, suggesting a related functional mechanism. Our study unveiled the subunit arrangement and cofactor composition essential for biological electron transfer. These findings enhance our understanding of NAD+-reducing [NiFe] hydrogenases in terms of their physiological function and structural requirements for biotechnologically relevant modifications.
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Affiliation(s)
- Elisabeth Lettau
- RWTH Aachen University, iAMB - Institute of Applied Microbiology, Worringerweg 1, 52074 Aachen, Germany; Technische Universität Berlin, Institute of Chemistry, Straße des 14. Juni 135, 10623 Berlin, Germany.
| | - Christian Lorent
- Technische Universität Berlin, Institute of Chemistry, Straße des 14. Juni 135, 10623 Berlin, Germany
| | - Jens Appel
- Universität Kassel, Molecular Plant Biology, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - Marko Boehm
- Universität Kassel, Molecular Plant Biology, Heinrich-Plett-Straße 40, 34132 Kassel, Germany
| | - Paul R F Cordero
- RWTH Aachen University, iAMB - Institute of Applied Microbiology, Worringerweg 1, 52074 Aachen, Germany
| | - Lars Lauterbach
- RWTH Aachen University, iAMB - Institute of Applied Microbiology, Worringerweg 1, 52074 Aachen, Germany.
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2
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Schumann C, Fernández Méndez J, Berggren G, Lindblad P. Novel concepts and engineering strategies for heterologous expression of efficient hydrogenases in photosynthetic microorganisms. Front Microbiol 2023; 14:1179607. [PMID: 37502399 PMCID: PMC10369191 DOI: 10.3389/fmicb.2023.1179607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2023] [Accepted: 06/09/2023] [Indexed: 07/29/2023] Open
Abstract
Hydrogen is considered one of the key enablers of the transition towards a sustainable and net-zero carbon economy. When produced from renewable sources, hydrogen can be used as a clean and carbon-free energy carrier, as well as improve the sustainability of a wide range of industrial processes. Photobiological hydrogen production is considered one of the most promising technologies, avoiding the need for renewable electricity and rare earth metal elements, the demands for which are greatly increasing due to the current simultaneous electrification and decarbonization goals. Photobiological hydrogen production employs photosynthetic microorganisms to harvest solar energy and split water into molecular oxygen and hydrogen gas, unlocking the long-pursued target of solar energy storage. However, photobiological hydrogen production has to-date been constrained by several limitations. This review aims to discuss the current state-of-the art regarding hydrogenase-driven photobiological hydrogen production. Emphasis is placed on engineering strategies for the expression of improved, non-native, hydrogenases or photosynthesis re-engineering, as well as their combination as one of the most promising pathways to develop viable large-scale hydrogen green cell factories. Herein we provide an overview of the current knowledge and technological gaps curbing the development of photobiological hydrogenase-driven hydrogen production, as well as summarizing the recent advances and future prospects regarding the expression of non-native hydrogenases in cyanobacteria and green algae with an emphasis on [FeFe] hydrogenases.
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Affiliation(s)
- Conrad Schumann
- Molecular Biomimetics, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
| | - Jorge Fernández Méndez
- Microbial Chemistry, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
| | - Gustav Berggren
- Molecular Biomimetics, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
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Shimakawa G. Electron transport in cyanobacterial thylakoid membranes: Are cyanobacteria simple models for photosynthetic organisms? JOURNAL OF EXPERIMENTAL BOTANY 2023:erad118. [PMID: 37025010 DOI: 10.1093/jxb/erad118] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Indexed: 06/19/2023]
Abstract
Cyanobacteria are structurally the simplest oxygenic phototrophs, which makes it difficult to understand the regulation of photosynthesis because the photosynthetic and respiratory processes share the same thylakoid membranes and cytosolic space. This review aimed to summarise the molecular mechanisms and in vivo activities of electron transport in cyanobacterial thylakoid membranes based on the latest progress in photosynthesis research in cyanobacteria. Photosynthetic linear electron transport for CO2 assimilation has the dominant electron flux in the thylakoid membranes. The capacity of O2 photoreduction in cyanobacteria is comparable to the photosynthetic CO2 assimilation, which is mediated by flavodiiron proteins. Additionally, cyanobacterial thylakoid membranes harbour the significant electron flux of respiratory electron transport through a homologue of respiratory complex I, which is also recognized as the part of cyclic electron transport chain if it is coupled with photosystem I in the light. Further, O2-independent alternative electron transports through hydrogenase and nitrate reductase function with reduced ferredoxin as the electron donor. Whereas all these electron transports are recently being understood one by one, the complexity as the whole regulatory system remains to be uncovered in near future.
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Affiliation(s)
- Ginga Shimakawa
- Department of Bioscience, School of Biological and Environmental Sciences, Kwansei Gakuin University, 1 Gakuen Uegahara, Sanda, Hyogo 669-1330, Japan
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Khetkorn W, Raksajit W, Maneeruttanarungroj C, Lindblad P. Photobiohydrogen Production and Strategies for H 2 Yield Improvements in Cyanobacteria. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2023; 183:253-279. [PMID: 37009974 DOI: 10.1007/10_2023_216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2023]
Abstract
Hydrogen gas (H2) is one of the potential future sustainable and clean energy carriers that may substitute the use of fossil resources including fuels since it has a high energy content (heating value of 141.65 MJ/kg) when compared to traditional hydrocarbon fuels [1]. Water is a primary product of combustion being a most significant advantage of H2 being environmentally friendly with the capacity to reduce global greenhouse gas emissions. H2 is used in various applications. It generates electricity in fuel cells, including applications in transportation, and can be applied as fuel in rocket engines [2]. Moreover, H2 is an important gas and raw material in many industrial applications. However, the high cost of the H2 production processes requiring the use of other energy sources is a significant disadvantage. At present, H2 can be prepared in many conventional ways, such as steam reforming, electrolysis, and biohydrogen production processes. Steam reforming uses high-temperature steam to produce hydrogen gas from fossil resources including natural gas. Electrolysis is an electrolytic process to decompose water molecules into O2 and H2. However, both these two methods are energy-intensive and producing hydrogen from natural gas, which is mostly methane (CH4) and in steam reforming generates CO2 and pollutants as by-products. On the other hand, biological hydrogen production is more environmentally sustainable and less energy intensive than thermochemical and electrochemical processes [3], but most concepts are not yet developed to production scale.
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Affiliation(s)
- Wanthanee Khetkorn
- Division of Biology, Faculty of Science and Technology, Rajamangala University of Technology, Thanyaburi, Pathum Thani, Thailand
| | - Wuttinun Raksajit
- Faculty of Veterinary Technology, Program of Animal Health Technology, Kasetsart University, Bangkok, Thailand
| | - Cherdsak Maneeruttanarungroj
- Department of Biology, School of Science, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand
- Bioenergy Research Unit, School of Science, King Mongkut's Institute of Technology Ladkrabang, Bangkok, Thailand
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry-Ångström, Uppsala University, Uppsala, Sweden.
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5
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Spasic J, Oliveira P, Pacheco C, Kourist R, Tamagnini P. Engineering cyanobacterial chassis for improved electron supply toward a heterologous ene-reductase. J Biotechnol 2022; 360:152-159. [PMID: 36370921 DOI: 10.1016/j.jbiotec.2022.11.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Revised: 11/07/2022] [Accepted: 11/08/2022] [Indexed: 11/10/2022]
Abstract
Cyanobacteria are noteworthy hosts for industrially relevant redox reactions, owing to a light-driven cofactor recycling system using water as electron donor. Customizing Synechocystis sp. PCC 6803 chassis by redirecting electron flow offers a particularly interesting approach to further improve light-driven biotransformations. Therefore, different chassis expressing the heterologous ene-reductase YqjM (namely ΔhoxYH, Δflv3, ΔndhD2 and ΔhoxYHΔflv3) were generated/evaluated. The results showed the robustness of the chassis, that exhibited growth and oxygen evolution rates similar to Synechocystis wild-type, even when expressing YqjM. By engineering the electron flow, the YqjM light-driven stereoselective reduction of 2-methylmaleimide to 2-methylsuccinimide was significantly enhanced in all chassis. In the best performing chassis (ΔhoxYH, lacking an active bidirectional hydrogenase) a 39 % increase was observed, reaching an in vivo specific activity of 116 U gDCW-1 and an initial reaction rate of 16.7 mM h-1. In addition, the presence of the heterologous YqjM mitigated substrate toxicity, and the conversion of 2-methylmaleimide increased oxygen evolution rates, in particular at higher light intensity. In conclusion, this work demonstrates that rational engineering of electron transfer pathways is a valid strategy to increase in vivo specific activities and initial reaction rates in cyanobacterial chassis harboring oxidoreductases.
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Affiliation(s)
- Jelena Spasic
- i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal; Institute of Molecular Biotechnology, Graz University of Technology, Petersgasse 14, 8010 Graz, Austria
| | - Paulo Oliveira
- i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal
| | - Catarina Pacheco
- i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal
| | - Robert Kourist
- Institute of Molecular Biotechnology, Graz University of Technology, Petersgasse 14, 8010 Graz, Austria
| | - Paula Tamagnini
- i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Rua Alfredo Allen 208, 4200-135 Porto, Portugal; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Rua do Campo Alegre, 4169-007 Porto, Portugal.
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Redding KE, Appel J, Boehm M, Schuhmann W, Nowaczyk MM, Yacoby I, Gutekunst K. Advances and challenges in photosynthetic hydrogen production. Trends Biotechnol 2022; 40:1313-1325. [PMID: 35581021 DOI: 10.1016/j.tibtech.2022.04.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Revised: 04/14/2022] [Accepted: 04/15/2022] [Indexed: 01/21/2023]
Abstract
The vision to replace coal with hydrogen goes back to Jules Verne in 1874. However, sustainable hydrogen production remains challenging. The most elegant approach is to utilize photosynthesis for water splitting and to subsequently save solar energy as hydrogen. Cyanobacteria and green algae are unicellular photosynthetic organisms that contain hydrogenases and thereby possess the enzymatic equipment for photosynthetic hydrogen production. These features of cyanobacteria and algae have inspired artificial and semi-artificial in vitro techniques, that connect photoexcited materials or enzymes with hydrogenases or mimics of these for hydrogen production. These in vitro methods have on their part been models for the fusion of cyanobacterial and algal hydrogenases to photosynthetic photosystem I (PSI) in vivo, which recently succeeded as proofs of principle.
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Affiliation(s)
- Kevin E Redding
- School of Molecular Sciences and Center for Bioenergy & Photosynthesis, Arizona State University, Tempe, AZ, USA
| | - Jens Appel
- Molecular Plant Physiology, Bioenergetics in Photoautotrophs, University Kassel, 34132 Kassel, Germany
| | - Marko Boehm
- Molecular Plant Physiology, Bioenergetics in Photoautotrophs, University Kassel, 34132 Kassel, Germany
| | - Wolfgang Schuhmann
- Analytical Chemistry - Center for Electrochemical Sciences (CES), Faculty of Chemistry and Biochemistry, Ruhr-University Bochum, Universitätsstrasse 150, 44780 Bochum, Germany
| | - Marc M Nowaczyk
- Plant Biochemistry, Faculty of Biology and Biotechnology, Ruhr-University Bochum, Universitätsstrasse 150, D-44780 Bochum, Germany
| | - Iftach Yacoby
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences, Tel-Aviv University, Ramat Aviv, 69978, Israel
| | - Kirstin Gutekunst
- Molecular Plant Physiology, Bioenergetics in Photoautotrophs, University Kassel, 34132 Kassel, Germany.
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Evidence for Electron Transfer from the Bidirectional Hydrogenase to the Photosynthetic Complex I (NDH-1) in the Cyanobacterium Synechocystis sp. PCC 6803. Microorganisms 2022; 10:microorganisms10081617. [PMID: 36014035 PMCID: PMC9414918 DOI: 10.3390/microorganisms10081617] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 08/01/2022] [Accepted: 08/02/2022] [Indexed: 12/12/2022] Open
Abstract
The cyanobacterial bidirectional [NiFe]-hydrogenase is a pentameric enzyme. Apart from the small and large hydrogenase subunits (HoxYH) it contains a diaphorase module (HoxEFU) that interacts with NAD(P)+ and ferredoxin. HoxEFU shows strong similarity to the outermost subunits (NuoEFG) of canonical respiratory complexes I. Photosynthetic complex I (NDH-1) lacks these three subunits. This led to the idea that HoxEFU might interact with NDH-1 instead. HoxEFUYH utilizes excited electrons from PSI for photohydrogen production and it catalyzes the reverse reaction and feeds electrons into the photosynthetic electron transport. We analyzed hydrogenase activity, photohydrogen evolution and hydrogen uptake, the respiration and photosynthetic electron transport of ΔhoxEFUYH, and a knock-out strain with dysfunctional NDH-1 (ΔndhD1/ΔndhD2) of the cyanobacterium Synechocystis sp. PCC 6803. Photohydrogen production was prolonged in ΔndhD1/ΔndhD2 due to diminished hydrogen uptake. Electrons from hydrogen oxidation must follow a different route into the photosynthetic electron transport in this mutant compared to wild type cells. Furthermore, respiration was reduced in ΔhoxEFUYH and the ΔndhD1/ΔndhD2 localization of the hydrogenase to the membrane was impaired. These data indicate that electron transfer from the hydrogenase to the NDH-1 complex is either direct, by the binding of the hydrogenase to the complex, or indirect, via an additional mediator.
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8
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Dey S, Kasai T, Katayama A. Promotion of biological H 2 (Bio-H 2) production by the nitrogen-fixing anaerobic microbial consortia using humin, a solid-phase humic substance. J Biosci Bioeng 2022; 134:144-152. [PMID: 35644797 DOI: 10.1016/j.jbiosc.2022.04.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Revised: 04/23/2022] [Accepted: 04/29/2022] [Indexed: 11/30/2022]
Abstract
Dark fermentative biological hydrogen (Bio-H2) production is expected to be a clean and sustainable H2 production technology, and the technologies have been studied to increase in the product yield as index. This study achieved high product yields of Bio-H2 using nitrogen-fixing consortia under nitrogen-deficient conditions with glucose or mannitol as substrate and humin as the extracellular electron mediator: 4.12 mol-H2/mol-glucose and 3.12 mol-H2/mol-mannitol. The high Bio-H2 production was observed under the conditions where both nitrogenase and hydrogenase were active in the presence of humin. Nitrogenase activity was confirmed by acetylene reduction activity and hydrogenase activity by Bio-H2 production under nitrogenase-inhibiting conditions with NH4NO3. [Fe-Fe] hydrogenase detected by a specific PCR and acetate, butyrate, formate, lactate, and pyruvate produced as by-products suggested the involvement of both pyruvate-ferredoxin-oxidoreductase and pyruvate formate lyase pathways in Bio-H2 production. Humin promoted the Bio-H2 production beyond the capacity of the consortium, which had reached saturation with the optimum concentrations of glucose and mannitol. Carbon balance suggested the concurrent H2 consumption by hydrogenotrophic methanogenesis and acetogenesis. Bio-H2 production of the washed and starved consortium with reduced humin under conditions with or without NH4NO3 suggests that humin promoted hydrogenase and nitrogenase activity by donating extracellular electrons. Clostridium and Ruminococcus in the consortia were considered major hydrogen producers. Thus, this study demonstrated the outstanding potential of nitrogen-fixing consortia under nitrogen-deficient conditions with humin as an extracellular electron mediator for dark fermentative Bio-H2 production with high yields.
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Affiliation(s)
- Sujan Dey
- Department of Civil and Environmental Engineering, Graduate School of Engineering, Nagoya University, Tokai National Higher Education and Research System, Chikusa, Nagoya 464-8603, Japan; Institute of Materials and Systems for Sustainability, Nagoya University, Tokai National Higher Education and Research System, Chikusa, Nagoya 464-8603, Japan
| | - Takuya Kasai
- Department of Civil and Environmental Engineering, Graduate School of Engineering, Nagoya University, Tokai National Higher Education and Research System, Chikusa, Nagoya 464-8603, Japan; Institute of Materials and Systems for Sustainability, Nagoya University, Tokai National Higher Education and Research System, Chikusa, Nagoya 464-8603, Japan
| | - Arata Katayama
- Department of Civil and Environmental Engineering, Graduate School of Engineering, Nagoya University, Tokai National Higher Education and Research System, Chikusa, Nagoya 464-8603, Japan; Institute of Materials and Systems for Sustainability, Nagoya University, Tokai National Higher Education and Research System, Chikusa, Nagoya 464-8603, Japan.
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9
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Sukkasam N, Incharoensakdi A, Monshupanee T. Disruption of Hydrogen Gas Synthesis Enhances the Cellular Levels of NAD(P)H, Glycogen, Poly(3-hydroxybutyrate) and Photosynthetic Pigments Under Specific Nutrient Condition(s) in Cyanobacterium Synechocystis sp. PCC 6803. PLANT & CELL PHYSIOLOGY 2022; 63:135-147. [PMID: 34698867 DOI: 10.1093/pcp/pcab156] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 10/15/2021] [Accepted: 10/25/2021] [Indexed: 06/13/2023]
Abstract
In photoautotrophic Synechocystis sp. PCC 6803, NADPH is generated from photosynthesis and utilized in various metabolism, including the biosynthesis of glyceraldehyde 3-phosphate (the upstream substrate for carbon metabolism), poly(3-hydroxybutyrate) (PHB), photosynthetic pigments, and hydrogen gas (H2). Redirecting NADPH flow from one biosynthesis pathway to another has yet to be studied. Synechocystis's H2 synthesis, one of the pathways consuming NAD(P)H, was disrupted by the inactivation of hoxY and hoxH genes encoding the two catalytic subunits of hydrogenase. Such inactivation with a complete disruption of H2 synthesis led to 1.4-, 1.9-, and 2.1-fold increased cellular NAD(P)H levels when cells were cultured in normal medium (BG11), the medium without nitrate (-N), and the medium without phosphate (-P), respectively. After 49-52 d of cultivation in BG11 (when the nitrogen source in the media was depleted), the cells with disrupted H2 synthesis had 1.3-fold increased glycogen level compared to wild type of 83-85% (w/w dry weight), the highest level reported for cyanobacterial glycogen. The increased glycogen content observed by transmission electron microscopy was correlated with the increased levels of glucose 6-phosphate and glucose 1-phosphate, the two substrates in glycogen synthesis. Disrupted H2 synthesis also enhanced PHB accumulation up to 1.4-fold under -P and 1.6-fold under -N and increased levels of photosynthetic pigments (chlorophyll a, phycocyanin, and allophycocyanin) by 1.3- to 1.5-fold under BG11. Thus, disrupted H2 synthesis increased levels of NAD(P)H, which may be utilized for the biosynthesis of glycogen, PHB, and pigments. This strategy might be applicable for enhancing other biosynthetic pathways that utilize NAD(P)H.
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Affiliation(s)
- Nannaphat Sukkasam
- Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Program in Biotechnology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Aran Incharoensakdi
- Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Academy of Science, Royal Society of Thailand, Bangkok 10300, Thailand
| | - Tanakarn Monshupanee
- Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Program in Biotechnology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
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10
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Purdy HM, Pfleger BF, Reed JL. Introduction of NADH-dependent nitrate assimilation in Synechococcus sp. PCC 7002 improves photosynthetic production of 2-methyl-1-butanol and isobutanol. Metab Eng 2022; 69:87-97. [PMID: 34774761 PMCID: PMC9026717 DOI: 10.1016/j.ymben.2021.11.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2021] [Revised: 10/09/2021] [Accepted: 11/05/2021] [Indexed: 02/06/2023]
Abstract
Cyanobacteria hold promise for renewable chemical production due to their photosynthetic nature, but engineered strains frequently display poor production characteristics. These difficulties likely arise in part due to the distinctive photoautotrophic metabolism of cyanobacteria. In this work, we apply a genome-scale metabolic model of the cyanobacteria Synechococus sp. PCC 7002 to identify strain designs accounting for this unique metabolism that are predicted to improve the production of various biofuel alcohols (e.g. 2-methyl-1-butanol, isobutanol, and 1-butanol) synthesized via an engineered biosynthesis pathway. Using the model, we identify that the introduction of a large, non-native NADH-demand into PCC 7002's metabolic network is predicted to enhance production of these alcohols by promoting NADH-generating reactions upstream of the production pathways. To test this, we construct strains of PCC 7002 that utilize a heterologous, NADH-dependent nitrite reductase in place of the native, ferredoxin-dependent enzyme to create an NADH-demand in the cells when grown on nitrate-containing media. We find that photosynthetic production of both isobutanol and 2-methyl-1-butanol is significantly improved in the engineered strain background relative to that in a wild-type background. We additionally identify that the use of high-nutrient media leads to a substantial prolongment of the production curve in our alcohol production strains. The metabolic engineering strategy identified and tested in this work presents a novel approach to engineer cyanobacterial production strains that takes advantage of a unique aspect of their metabolism and serves as a basis on which to further develop strains with improved production of these alcohols and related products.
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Affiliation(s)
- Hugh M Purdy
- Department of Chemical and Biological Engineering, University of Wisconsin - Madison, 1415 Engineering Dr., Madison, WI, 53706, USA.
| | - Brian F Pfleger
- Department of Chemical and Biological Engineering, University of Wisconsin - Madison, 1415 Engineering Dr., Madison, WI, 53706, USA.
| | - Jennifer L Reed
- Department of Chemical and Biological Engineering, University of Wisconsin - Madison, 1415 Engineering Dr., Madison, WI, 53706, USA.
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11
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Kosourov S, Böhm M, Senger M, Berggren G, Stensjö K, Mamedov F, Lindblad P, Allahverdiyeva Y. Photosynthetic hydrogen production: Novel protocols, promising engineering approaches and application of semi-synthetic hydrogenases. PHYSIOLOGIA PLANTARUM 2021; 173:555-567. [PMID: 33860946 DOI: 10.1111/ppl.13428] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Accepted: 04/05/2021] [Indexed: 06/12/2023]
Abstract
Photosynthetic production of molecular hydrogen (H2 ) by cyanobacteria and green algae is a potential source of renewable energy. These organisms are capable of water biophotolysis by taking advantage of photosynthetic apparatus that links water oxidation at Photosystem II and reduction of protons to H2 downstream of Photosystem I. Although the process has a theoretical potential to displace fossil fuels, photosynthetic H2 production in its current state is not yet efficient enough for industrial applications due to a number of physiological, biochemical, and engineering barriers. This article presents a short overview of the metabolic pathways and enzymes involved in H2 photoproduction in cyanobacteria and green algae and our present understanding of the mechanisms of this process. We also summarize recent advances in engineering photosynthetic cell factories capable of overcoming the major barriers to efficient and sustainable H2 production.
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Affiliation(s)
- Sergey Kosourov
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
| | - Maximilian Böhm
- Molecular Biomimetics, Department of Chemistry-Ångström, Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Moritz Senger
- Molecular Biomimetics, Department of Chemistry-Ångström, Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Gustav Berggren
- Molecular Biomimetics, Department of Chemistry-Ångström, Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Karin Stensjö
- Microbial Chemistry, Department of Chemistry-Ångström, Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Fikret Mamedov
- Molecular Biomimetics, Department of Chemistry-Ångström, Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry-Ångström, Ångström Laboratory, Uppsala University, Uppsala, Sweden
| | - Yagut Allahverdiyeva
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
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12
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Madavi TB, Chauhan S, Jha M, Choi KY, Pamidimarri SDVN. Biohydrogen Machinery: Recent Insights, Genetic Fabrication, and Future Prospects. Chem Eng Technol 2021. [DOI: 10.1002/ceat.202000527] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Tanushree Baldeo Madavi
- Amity University Chhattisgarh Amity Institute of Biotechnology 493225 Raipur, Chhattisgarh India
| | - Sushma Chauhan
- Amity University Chhattisgarh Amity Institute of Biotechnology 493225 Raipur, Chhattisgarh India
| | - Meenakshi Jha
- Amity University Chhattisgarh Amity Institute of Biotechnology 493225 Raipur, Chhattisgarh India
| | - Kwon-Young Choi
- College of Engineering, Ajou University Department of Environmental Engineering Suwon Gyeonggi-do South Korea
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13
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Burlacot A, Burlacot F, Li-Beisson Y, Peltier G. Membrane Inlet Mass Spectrometry: A Powerful Tool for Algal Research. FRONTIERS IN PLANT SCIENCE 2020; 11:1302. [PMID: 33013952 PMCID: PMC7500362 DOI: 10.3389/fpls.2020.01302] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Accepted: 08/11/2020] [Indexed: 05/15/2023]
Abstract
Since the first great oxygenation event, photosynthetic microorganisms have continuously shaped the Earth's atmosphere. Studying biological mechanisms involved in the interaction between microalgae and cyanobacteria with the Earth's atmosphere requires the monitoring of gas exchange. Membrane inlet mass spectrometry (MIMS) has been developed in the early 1960s to study gas exchange mechanisms of photosynthetic cells. It has since played an important role in investigating various cellular processes that involve gaseous compounds (O2, CO2, NO, or H2) and in characterizing enzymatic activities in vitro or in vivo. With the development of affordable mass spectrometers, MIMS is gaining wide popularity and is now used by an increasing number of laboratories. However, it still requires an important theory and practical considerations to be used. Here, we provide a practical guide describing the current technical basis of a MIMS setup and the general principles of data processing. We further review how MIMS can be used to study various aspects of algal research and discuss how MIMS will be useful in addressing future scientific challenges.
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14
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Patil PP, Vass I, Kodru S, Szabó M. A multi-parametric screening platform for photosynthetic trait characterization of microalgae and cyanobacteria under inorganic carbon limitation. PLoS One 2020; 15:e0236188. [PMID: 32701995 PMCID: PMC7377499 DOI: 10.1371/journal.pone.0236188] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Accepted: 06/30/2020] [Indexed: 11/18/2022] Open
Abstract
Microalgae and cyanobacteria are considered as important model organisms to investigate the biology of photosynthesis; moreover, they are valuable sources of biomolecules for several biotechnological applications. Understanding the species-specific traits of photosynthetic electron transport is extremely important, because it contributes to the regulation of ATP/NADPH ratio, which has direct/indirect links to carbon fixation and other metabolic pathways and thus overall growth and biomass production. In the present work, a cuvette-based setup is developed, in which a combination of measurements of dissolved oxygen, pH, chlorophyll fluorescence and NADPH kinetics can be performed without disturbing the physiological status of the sample. The suitability of the system is demonstrated using a model cyanobacterium Synechocystis sp. PCC6803, as well as biofuel-candidate microalgae species, such as Chlorella sorokiniana, Dunaliella salina and Nannochloropsis limnetica undergoing inorganic carbon (Ci) limitation. Inorganic carbon limitation, induced by photosynthetic Ci uptake under continuous illumination, caused a decrease in the effective quantum yield of PSII (Y(II)) and loss of oxygen-evolving capacity in all species investigated here; these effects were largely recovered by the addition of NaHCO3. Detailed analysis of the dark-light and light-dark transitions of NADPH production/uptake and changes in chlorophyll fluorescence kinetics revealed species- and condition-specific responses. These responses indicate that the impact of decreased Calvin-Benson cycle activity on photosynthetic electron transport pathways involving several sections of the electron transport chain (such as electron transfer via the QA-QB-plastoquinone pool, the redox state of the plastoquinone pool) can be analyzed with high sensitivity in a comparative manner. Therefore, the integrated system presented here can be applied for screening for specific traits in several significant species at different stages of inorganic carbon limitation, a condition that strongly impacts primary productivity.
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Affiliation(s)
| | - Imre Vass
- Institute of Plant Biology, Biological Research Centre, Szeged, Hungary
| | - Sandeesha Kodru
- Institute of Plant Biology, Biological Research Centre, Szeged, Hungary
- Biology PhD School, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary
| | - Milán Szabó
- Institute of Plant Biology, Biological Research Centre, Szeged, Hungary
- Climate Change Cluster, University of Technology Sydney, Ultimo, Australia
- * E-mail:
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15
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Artz JH, Tokmina-Lukaszewska M, Mulder DW, Lubner CE, Gutekunst K, Appel J, Bothner B, Boehm M, King PW. The structure and reactivity of the HoxEFU complex from the cyanobacterium Synechocystis sp. PCC 6803. J Biol Chem 2020; 295:9445-9454. [PMID: 32409585 PMCID: PMC7363133 DOI: 10.1074/jbc.ra120.013136] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Revised: 05/11/2020] [Indexed: 11/19/2022] Open
Abstract
Cyanobacterial Hox is a [NiFe] hydrogenase that consists of the hydrogen (H2)-activating subunits HoxYH, which form a complex with the HoxEFU assembly to mediate reactions with soluble electron carriers like NAD(P)H and ferredoxin (Fdx), thereby coupling photosynthetic electron transfer to energy-transforming catalytic reactions. Researchers studying the HoxEFUYH complex have observed that HoxEFU can be isolated independently of HoxYH, leading to the hypothesis that HoxEFU is a distinct functional subcomplex rather than an artifact of Hox complex isolation. Moreover, outstanding questions about the reactivity of Hox with natural substrates and the site(s) of substrate interactions and coupling of H2, NAD(P)H, and Fdx remain to be resolved. To address these questions, here we analyzed recombinantly produced HoxEFU by electron paramagnetic resonance spectroscopy and kinetic assays with natural substrates. The purified HoxEFU subcomplex catalyzed electron transfer reactions among NAD(P)H, flavodoxin, and several ferredoxins, thus functioning in vitro as a shuttle among different cyanobacterial pools of reducing equivalents. Both Fdx1-dependent reductions of NAD+ and NADP+ were cooperative. HoxEFU also catalyzed the flavodoxin-dependent reduction of NAD(P)+, Fdx2-dependent oxidation of NADH and Fdx4- and Fdx11-dependent reduction of NAD+. MS-based mapping identified an Fdx1-binding site at the junction of HoxE and HoxF, adjacent to iron-sulfur (FeS) clusters in both subunits. Overall, the reactivity of HoxEFU observed here suggests that it functions in managing peripheral electron flow from photosynthetic electron transfer, findings that reveal detailed insights into how ubiquitous cellular components may be used to allocate energy flow into specific bioenergetic products.
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Affiliation(s)
- Jacob H Artz
- Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA
| | | | - David W Mulder
- Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA
| | - Carolyn E Lubner
- Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA
| | | | - Jens Appel
- Botanical Institute, Christian-Albrechts-University, Kiel, Germany
| | - Brian Bothner
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA
| | - Marko Boehm
- Botanical Institute, Christian-Albrechts-University, Kiel, Germany
| | - Paul W King
- Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA
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16
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Roumezi B, Avilan L, Risoul V, Brugna M, Rabouille S, Latifi A. Overproduction of the Flv3B flavodiiron, enhances the photobiological hydrogen production by the nitrogen-fixing cyanobacterium Nostoc PCC 7120. Microb Cell Fact 2020; 19:65. [PMID: 32156284 PMCID: PMC7063810 DOI: 10.1186/s12934-020-01320-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Accepted: 02/27/2020] [Indexed: 11/16/2022] Open
Abstract
Background The ability of some photosynthetic microorganisms, particularly cyanobacteria and microalgae, to produce hydrogen (H2) is a promising alternative for renewable, clean-energy production. However, the most recent, related studies point out that much improvement is needed for sustainable cyanobacterial-based H2 production to become economically viable. In this study, we investigated the impact of induced O2-consumption on H2 photoproduction yields in the heterocyte-forming, N2-fixing cyanobacterium Nostoc PCC7120. Results The flv3B gene, encoding a flavodiiron protein naturally expressed in Nostoc heterocytes, was overexpressed. Under aerobic and phototrophic growth conditions, the recombinant strain displayed a significantly higher H2 production than the wild type. Nitrogenase activity assays indicated that flv3B overexpression did not enhance the nitrogen fixation rates. Interestingly, the transcription of the hox genes, encoding the NiFe Hox hydrogenase, was significantly elevated, as shown by the quantitative RT-PCR analyses. Conclusion We conclude that the overproduced Flv3B protein might have enhanced O2-consumption, thus creating conditions inducing hox genes and facilitating H2 production. The present study clearly demonstrates the potential to use metabolic engineered cyanobacteria for photosynthesis driven H2 production.
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Affiliation(s)
- Baptiste Roumezi
- Aix Marseille Univ, CNRS, LCB, Laboratoire de Chimie Bactérienne, Marseille, France
| | - Luisana Avilan
- Aix Marseille Univ, CNRS, BIP, Laboratoire de Bioénergétique et Ingénierie des Protéines, Marseille, France
| | - Véronique Risoul
- Aix Marseille Univ, CNRS, LCB, Laboratoire de Chimie Bactérienne, Marseille, France
| | - Myriam Brugna
- Aix Marseille Univ, CNRS, BIP, Laboratoire de Bioénergétique et Ingénierie des Protéines, Marseille, France
| | - Sophie Rabouille
- Sorbonne Université, CNRS, Laboratoire d'Océanographie de Villefanche, LOV, 06230, Villefranche-sur-Mer, France.,Sorbonne Université, CNRS, Laboratoire d'Océanographie Microbienne, LOMIC, 66650, Banyuls-sur-Mer, France
| | - Amel Latifi
- Aix Marseille Univ, CNRS, LCB, Laboratoire de Chimie Bactérienne, Marseille, France.
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17
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Nishikawa K, Ogata H, Higuchi Y. Structural Basis of the Function of [NiFe]-hydrogenases. CHEM LETT 2020. [DOI: 10.1246/cl.190814] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Koji Nishikawa
- Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
| | - Hideaki Ogata
- Institute of Low Temperature Science, Hokkaido University, Kita19Nishi8, Kita-ku, Sapporo, Hokkaido 060-0819, Japan
| | - Yoshiki Higuchi
- Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan
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18
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Genetic Engineering for Enhancement of Biofuel Production in Microalgae. CLEAN ENERGY PRODUCTION TECHNOLOGIES 2020. [DOI: 10.1007/978-981-15-9593-6_21] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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19
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Effects of the Photosystem II Inhibitors CCCP and DCMU on Hydrogen Production by the Unicellular Halotolerant Cyanobacterium Aphanothece halophytica. ScientificWorldJournal 2019; 2019:1030236. [PMID: 31346323 PMCID: PMC6620853 DOI: 10.1155/2019/1030236] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 06/03/2019] [Accepted: 06/11/2019] [Indexed: 12/03/2022] Open
Abstract
The unicellular halotolerant cyanobacterium Aphanothece halophytica is a potential dark fermentative producer of molecular hydrogen (H2) that produces very little H2 under illumination. One factor limiting the H2 photoproduction of this cyanobacterium is an inhibition of bidirectional hydrogenase activity by oxygen (O2) obtained from splitting water molecules via photosystem II activity. The present study aimed to investigate the effects of the photosystem II inhibitors carbonyl cyanide m-chlorophenyl hydrazone (CCCP) and 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU) on H2 production of A. halophytica under light and dark conditions and on photosynthetic and respiratory activities. The results showed that A. halophytica treated with CCCP and DCMU produced H2 at three to five times the rate of untreated cells, when exposed to light. The highest H2 photoproduction rates, 2.26 ± 0.24 and 3.63 ± 0.26 μmol H2 g−1 dry weight h−1, were found in cells treated with 0.5 μM CCCP and 50 μM DCMU, respectively. Without inhibitor treatment, A. halophytica incubated in the dark showed a significant increase in H2 production compared with cells that were incubated in the light. Only CCCP treatment increased H2 production of A. halophytica during dark incubation, because CCCP functions as an uncoupling agent of oxidative phosphorylation. The highest dark fermentative H2 production rate of 39.50 ± 2.13 μmol H2 g−1 dry weight h−1 was found in cells treated with 0.5 μM CCCP after 2 h of dark incubation. Under illumination, CCCP and DCMU inhibited chlorophyll fluorescence, resulting in a low level of O2, which promoted bidirectional hydrogenase activity in A. halophytica cells. In addition, only CCCP enhanced the respiration rate, further reducing the O2 level. In contrast, DCMU reduced the respiration rate in A. halophytica.
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20
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Pernil R, Schleiff E. Metalloproteins in the Biology of Heterocysts. Life (Basel) 2019; 9:E32. [PMID: 30987221 PMCID: PMC6616624 DOI: 10.3390/life9020032] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 03/18/2019] [Accepted: 03/28/2019] [Indexed: 12/15/2022] Open
Abstract
Cyanobacteria are photoautotrophic microorganisms present in almost all ecologically niches on Earth. They exist as single-cell or filamentous forms and the latter often contain specialized cells for N₂ fixation known as heterocysts. Heterocysts arise from photosynthetic active vegetative cells by multiple morphological and physiological rearrangements including the absence of O₂ evolution and CO₂ fixation. The key function of this cell type is carried out by the metalloprotein complex known as nitrogenase. Additionally, many other important processes in heterocysts also depend on metalloproteins. This leads to a high metal demand exceeding the one of other bacteria in content and concentration during heterocyst development and in mature heterocysts. This review provides an overview on the current knowledge of the transition metals and metalloproteins required by heterocysts in heterocyst-forming cyanobacteria. It discusses the molecular, physiological, and physicochemical properties of metalloproteins involved in N₂ fixation, H₂ metabolism, electron transport chains, oxidative stress management, storage, energy metabolism, and metabolic networks in the diazotrophic filament. This provides a detailed and comprehensive picture on the heterocyst demands for Fe, Cu, Mo, Ni, Mn, V, and Zn as cofactors for metalloproteins and highlights the importance of such metalloproteins for the biology of cyanobacterial heterocysts.
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Affiliation(s)
- Rafael Pernil
- Institute for Molecular Biosciences, Goethe University Frankfurt, Max-von-Laue-Straβe 9, 60438 Frankfurt am Main, Germany.
| | - Enrico Schleiff
- Institute for Molecular Biosciences, Goethe University Frankfurt, Max-von-Laue-Straβe 9, 60438 Frankfurt am Main, Germany.
- Frankfurt Institute for Advanced Studies, Ruth-Moufang-Straße 1, 60438 Frankfurt am Main, Germany.
- Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt, Max-von-Laue-Straβe 15, 60438 Frankfurt am Main, Germany.
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21
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Kawahara-Nakagawa Y, Nishikawa K, Nakashima S, Inoue S, Ohta T, Ogura T, Shigeta Y, Fukutani K, Yagi T, Higuchi Y. New assay method based on Raman spectroscopy for enzymes reacting with gaseous substrates. Protein Sci 2019; 28:663-670. [PMID: 30609080 PMCID: PMC6371215 DOI: 10.1002/pro.3569] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2018] [Revised: 12/27/2018] [Accepted: 12/31/2018] [Indexed: 11/29/2022]
Abstract
Enzyme activity is typically assayed by quantitatively measuring the initial and final concentrations of the substrates and/or products over a defined time period. For enzymatic reactions involving gaseous substrates, the substrate concentrations can be estimated either directly by gas chromatography or mass spectrometry, or indirectly by absorption spectroscopy, if the catalytic reactions involve electron transfer with electron mediators that exhibit redox‐dependent spectral changes. We have developed a new assay system for measuring the time course of enzymatic reactions involving gaseous substrates based on Raman spectroscopy. This system permits continuous monitoring of the gas composition in the reaction cuvette in a non‐invasive manner over a prolonged time period. We have applied this system to the kinetic study of the [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F. This enzyme physiologically catalyzes the reversible oxidation of H2 and also possesses the nonphysiological functions of H/D exchange and nuclear spin isomer conversion reactions. The proposed system has the additional advantage of enabling us to measure all of the hydrogenase‐mediated reactions simultaneously. Using the proposed system, we confirmed that H2 (the fully exchanged product) is concomitantly produced alongside HD by the H/D exchange reaction in the D2/H2O system. Based on a kinetic model, the ratio of the rate constants of the H/D exchange reaction (k) at the active site and product release rate (kout) was estimated to be 1.9 ± 0.2. The proposed assay method based on Raman spectroscopy can be applied to the investigation of other enzymes involving gaseous substrates.
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Affiliation(s)
- Yuka Kawahara-Nakagawa
- Department of Picobiology, Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan
| | - Koji Nishikawa
- Department of Picobiology, Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan.,Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency (JST), Kawaguchi Center Building, Saitama, 332-0012, Japan
| | - Satoru Nakashima
- Division for Research Strategy, Institute for Research Initiatives, Nara Institute of Science and Technology, Nara, 630-0192, Japan
| | - Shota Inoue
- Department of Picobiology, Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan
| | - Takehiro Ohta
- Department of Applied Chemistry, Faculty of Engineering, Sanyo-Onoda City University, Yamaguchi, 756-0884, Japan
| | - Takashi Ogura
- Department of Picobiology, Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan
| | - Yasuteru Shigeta
- Division of Life Science, Center for Computational Science, University of Tsukuba, Ibaraki, 305-8571, Japan
| | - Katsuyuki Fukutani
- Department of Fundamental Engineering, Institute of Industrial Science, The University of Tokyo, Tokyo, 153-8505, Japan
| | | | - Yoshiki Higuchi
- Department of Picobiology, Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan.,Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency (JST), Kawaguchi Center Building, Saitama, 332-0012, Japan
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22
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Wegelius A, Khanna N, Esmieu C, Barone GD, Pinto F, Tamagnini P, Berggren G, Lindblad P. Generation of a functional, semisynthetic [FeFe]-hydrogenase in a photosynthetic microorganism. ENERGY & ENVIRONMENTAL SCIENCE 2018; 11:3163-3167. [PMID: 30555530 PMCID: PMC6243476 DOI: 10.1039/c8ee01975d] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2018] [Accepted: 09/21/2018] [Indexed: 05/26/2023]
Abstract
[FeFe]-Hydrogenases are hydrogen producing metalloenzymes with excellent catalytic capacities, highly relevant in the context of a future hydrogen economy. Here we demonstrate the synthetic activation of a heterologously expressed [FeFe]-hydrogenase in living cells of Synechocystis PCC 6803, a photoautotrophic microbial chassis with high potential for biotechnological energy applications. H2-Evolution assays clearly show that the non-native, semi-synthetic enzyme links to the native metabolism in living cells.
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Affiliation(s)
- Adam Wegelius
- Microbial Chemistry, Department of Chemistry-Ångström, Uppsala University , Box 523 , SE-751 20 Uppsala , Sweden .
| | - Namita Khanna
- Microbial Chemistry, Department of Chemistry-Ångström, Uppsala University , Box 523 , SE-751 20 Uppsala , Sweden .
| | - Charlène Esmieu
- Molecular Biomimetics, Department of Chemistry-Ångström, Uppsala University , Box 523 , SE-751 20 Uppsala , Sweden .
| | - Giovanni Davide Barone
- Microbial Chemistry, Department of Chemistry-Ångström, Uppsala University , Box 523 , SE-751 20 Uppsala , Sweden .
| | - Filipe Pinto
- i3S - Instituto de Investigação e Inovação em Saúde , IBMC - Instituto de Biologia Molecular e Celular , Universidade do Porto , 4200-135 Porto , Portugal
- Faculdade de Ciências, Departamento de Biologia, Universidade do Porto , 4169-007 Porto , Portugal
| | - Paula Tamagnini
- i3S - Instituto de Investigação e Inovação em Saúde , IBMC - Instituto de Biologia Molecular e Celular , Universidade do Porto , 4200-135 Porto , Portugal
- Faculdade de Ciências, Departamento de Biologia, Universidade do Porto , 4169-007 Porto , Portugal
| | - Gustav Berggren
- Molecular Biomimetics, Department of Chemistry-Ångström, Uppsala University , Box 523 , SE-751 20 Uppsala , Sweden .
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry-Ångström, Uppsala University , Box 523 , SE-751 20 Uppsala , Sweden .
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23
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Berepiki A, Gittins JR, Moore CM, Bibby TS. Rational engineering of photosynthetic electron flux enhances light-powered cytochrome P450 activity. Synth Biol (Oxf) 2018; 3:ysy009. [PMID: 32995517 PMCID: PMC7445785 DOI: 10.1093/synbio/ysy009] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2017] [Revised: 05/04/2018] [Accepted: 05/25/2018] [Indexed: 11/21/2022] Open
Abstract
In this study, we exploited a modified photosynthetic electron transfer chain (PET) in the model cyanobacterium Synechococcus PCC 7002, where electrons derived from water-splitting are used to power reactions catalyzed by a heterologous cytochrome P450 (CYP1A1). A simple in vivo fluorescent assay for CYP1A1 activity was employed to determine the impact of rationally engineering of photosynthetic electron flow. This showed that knocking out a subunit of the type I NADH dehydrogenase complex (NDH-1), suggested to be involved in cyclic photosynthetic electron flow (ΔndhD2), can double the activity of CYP1A1, with a concomitant increase in the flux of electrons from photosynthesis. This also resulted in an increase in cellular adenosine triphosphate (ATP) and the ATP/nicotinamide adenine dinucleotide phosphate (NADPH) ratio, suggesting that expression of a heterologous electron sink in photosynthetic organisms can be used to modify the bioenergetic landscape of the cell. We therefore demonstrate that CYP1A1 is limited by electron supply and that photosynthesis can be re-engineered to increase heterologous P450 activity for the production of high-value bioproducts. The increase in cellular ATP achieved could be harnessed to support metabolically demanding heterologous processes. Furthermore, this experimental system could provide valuable insights into the mechanisms of photosynthesis.
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Affiliation(s)
- Adokiye Berepiki
- Ocean and Earth Science, University of Southampton, Waterfront Campus, National Oceanography Centre, Southampton SO14 3ZH, UK.,Manchester Institute of Biotechnology, University of Manchester, Princess St, Manchester M1 7DN, UK
| | - John R Gittins
- Ocean and Earth Science, University of Southampton, Waterfront Campus, National Oceanography Centre, Southampton SO14 3ZH, UK
| | - C Mark Moore
- Ocean and Earth Science, University of Southampton, Waterfront Campus, National Oceanography Centre, Southampton SO14 3ZH, UK
| | - Thomas S Bibby
- Ocean and Earth Science, University of Southampton, Waterfront Campus, National Oceanography Centre, Southampton SO14 3ZH, UK
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24
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Veaudor T, Ortega-Ramos M, Jittawuttipoka T, Bottin H, Cassier-Chauvat C, Chauvat F. Overproduction of the cyanobacterial hydrogenase and selection of a mutant thriving on urea, as a possible step towards the future production of hydrogen coupled with water treatment. PLoS One 2018; 13:e0198836. [PMID: 29879209 PMCID: PMC5991728 DOI: 10.1371/journal.pone.0198836] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Accepted: 05/25/2018] [Indexed: 01/01/2023] Open
Abstract
Using a combination of various types of genetic manipulations (promoter replacement and gene cloning in replicating plasmid expression vector), we have overproduced the complex hydrogenase enzyme in the model cyanobacterium Synechocystis PCC6803. This new strain overproduces all twelve following proteins: HoxEFUYH (hydrogen production), HoxW (maturation of the HoxH subunit of hydrogenase) and HypABCDEF (assembly of the [NiFe] redox center of HoxHY hydrogenase). This strain when grown in the presence of a suitable quantities of nickel and iron used here exhibits a strong (25-fold) increase in hydrogenase activity, as compared to the WT strain growing in the standard medium. Hence, this strain can be very useful for future analyses of the cyanobacterial [NiFe] hydrogenase to determine its structure and, in turn, improve its tolerance to oxygen with the future goal of increasing hydrogen production. We also report the counterintuitive notion that lowering the activity of the Synechocystis urease can increase the photoproduction of biomass from urea-polluted waters, without decreasing hydrogenase activity. Such cyanobacterial factories with high hydrogenase activity and a healthy growth on urea constitute an important step towards the future development of an economical industrial processes coupling H2 production from solar energy and CO2, with wastewater treatment (urea depollution).
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Affiliation(s)
- Théo Veaudor
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Marcia Ortega-Ramos
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Thichakorn Jittawuttipoka
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Hervé Bottin
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Corinne Cassier-Chauvat
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Franck Chauvat
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
- * E-mail:
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25
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Gutekunst K. Hypothesis on the Synchronistic Evolution of Autotrophy and Heterotrophy. Trends Biochem Sci 2018; 43:402-411. [DOI: 10.1016/j.tibs.2018.03.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2017] [Revised: 03/05/2018] [Accepted: 03/20/2018] [Indexed: 10/17/2022]
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Gutekunst K, Hoffmann D, Westernströer U, Schulz R, Garbe-Schönberg D, Appel J. In-vivo turnover frequency of the cyanobacterial NiFe-hydrogenase during photohydrogen production outperforms in-vitro systems. Sci Rep 2018; 8:6083. [PMID: 29666458 PMCID: PMC5904137 DOI: 10.1038/s41598-018-24430-y] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Accepted: 03/28/2018] [Indexed: 12/12/2022] Open
Abstract
Cyanobacteria provide all components for sunlight driven biohydrogen production. Their bidirectional NiFe-hydrogenase is resistant against low levels of oxygen with a preference for hydrogen evolution. However, until now it was unclear if its catalytic efficiency can keep pace with the photosynthetic electron transfer rate. We identified NikKLMQO (sll0381-sll0385) as a nickel transporter, which is required for hydrogen production. ICP-MS measurements were used to quantify hydrogenase molecules per cell. We found 400 to 2000 hydrogenase molecules per cell depending on the conditions. In-vivo turnover frequencies of the enzyme ranged from 62 H2/s in the wild type to 120 H2/s in a mutant during photohydrogen production. These frequencies are above maximum in-vivo photosynthetic electron transfer rates of 47 e-/s (equivalent to 24 H2/s). They are also above those of existing in-vitro systems working with unlimited electron supply and show that in-vivo photohydrogen production is limited by electron delivery to the enzyme.
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Affiliation(s)
- Kirstin Gutekunst
- Botanical Institute, Christian-Albrechts-University, 24118, Kiel, Germany
| | - Dörte Hoffmann
- Botanical Institute, Christian-Albrechts-University, 24118, Kiel, Germany
| | | | - Rüdiger Schulz
- Botanical Institute, Christian-Albrechts-University, 24118, Kiel, Germany
| | | | - Jens Appel
- Botanical Institute, Christian-Albrechts-University, 24118, Kiel, Germany.
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27
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Di Cesare A, Cabello-Yeves PJ, Chrismas NAM, Sánchez-Baracaldo P, Salcher MM, Callieri C. Genome analysis of the freshwater planktonic Vulcanococcus limneticus sp. nov. reveals horizontal transfer of nitrogenase operon and alternative pathways of nitrogen utilization. BMC Genomics 2018; 19:259. [PMID: 29661139 PMCID: PMC5902973 DOI: 10.1186/s12864-018-4648-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Accepted: 04/05/2018] [Indexed: 01/30/2023] Open
Abstract
BACKGROUND Many cyanobacteria are capable of fixing atmospheric nitrogen, playing a crucial role in biogeochemical cycling. Little is known about freshwater unicellular cyanobacteria Synechococcus spp. at the genomic level, despite being recognised of considerable ecological importance in aquatic ecosystems. So far, it has not been shown whether these unicellular picocyanobacteria have the potential for nitrogen fixation. Here, we present the draft-genome of the new pink-pigmented Synechococcus-like strain Vulcanococcus limneticus. sp. nov., isolated from the volcanic Lake Albano (Central Italy). RESULTS The novel species Vulcanococcus limneticus sp. nov. falls inside the sub-cluster 5.2, close to the estuarine/marine strains in a maximum-likelihood phylogenetic tree generated with 259 marker genes with representatives from marine, brackish, euryhaline and freshwater habitats. V.limneticus sp. nov. possesses a complete nitrogenase and nif operon. In an experimental setup under nitrogen limiting and non-limiting conditions, growth was observed in both cases. However, the nitrogenase genes (nifHDK) were not transcribed, i.e., V.limneticus sp. nov. did not fix nitrogen, but instead degraded the phycobilisomes to produce sufficient amounts of ammonia. Moreover, the strain encoded many other pathways to incorporate ammonia, nitrate and sulphate, which are energetically less expensive for the cell than fixing nitrogen. The association of the nif operon to a genomic island, the relatively high amount of mobile genetic elements (52 transposases) and the lower observed GC content of V.limneticus sp. nov. nif operon (60.54%) compared to the average of the strain (68.35%) support the theory that this planktonic strain may have obtained, at some point of its evolution, the nif operon by horizontal gene transfer (HGT) from a filamentous or heterocystous cyanobacterium. CONCLUSIONS In this study, we describe the novel species Vulcanococcus limneticus sp. nov., which possesses a complete nif operon for nitrogen fixation. The finding that in our experimental conditions V.limneticus sp. nov. did not express the nifHDK genes led us to reconsider the actual ecological meaning of these accessory genes located in genomic island that have possibly been acquired via HGT.
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Affiliation(s)
- Andrea Di Cesare
- National Research Council CNR-ISE, Largo Tonolli 50, 28922, Verbania, Italy.,Department of Earth, Environmental, and Life Sciences, University of Genoa, 16132, Genoa, Italy
| | - Pedro J Cabello-Yeves
- Evolutionary Genomics Group, Departamento de Producción Vegetal y Microbiología, Universidad Miguel Hernández, San Juan de Alicante, Spain
| | - Nathan A M Chrismas
- School of Geographical Sciences, University of Bristol, Bristol, BS8 1SS, UK.,Marine Biological Association of the United Kingdom, The Laboratory, Citadel Hill, Plymouth, UK
| | | | - Michaela M Salcher
- Limnological Station, Institute of Plant and Microbial Biology, University of Zurich, Kilchberg, Switzerland
| | - Cristiana Callieri
- National Research Council CNR-ISE, Largo Tonolli 50, 28922, Verbania, Italy.
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Rewiring of Cyanobacterial Metabolism for Hydrogen Production: Synthetic Biology Approaches and Challenges. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2018; 1080:171-213. [PMID: 30091096 DOI: 10.1007/978-981-13-0854-3_8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/06/2022]
Abstract
With the demand for renewable energy growing, hydrogen (H2) is becoming an attractive energy carrier. Developing H2 production technologies with near-net zero carbon emissions is a major challenge for the "H2 economy." Certain cyanobacteria inherently possess enzymes, nitrogenases, and bidirectional hydrogenases that are capable of H2 evolution using sunlight, making them ideal cell factories for photocatalytic conversion of water to H2. With the advances in synthetic biology, cyanobacteria are currently being developed as a "plug and play" chassis to produce H2. This chapter describes the metabolic pathways involved and the theoretical limits to cyanobacterial H2 production and summarizes the metabolic engineering technologies pursued.
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29
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Lenz O, Lauterbach L, Frielingsdorf S. O2-tolerant [NiFe]-hydrogenases of Ralstonia eutropha H16: Physiology, molecular biology, purification, and biochemical analysis. Methods Enzymol 2018; 613:117-151. [DOI: 10.1016/bs.mie.2018.10.008] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2022]
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30
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Khetkorn W, Rastogi RP, Incharoensakdi A, Lindblad P, Madamwar D, Pandey A, Larroche C. Microalgal hydrogen production - A review. BIORESOURCE TECHNOLOGY 2017; 243:1194-1206. [PMID: 28774676 DOI: 10.1016/j.biortech.2017.07.085] [Citation(s) in RCA: 96] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2017] [Revised: 07/13/2017] [Accepted: 07/17/2017] [Indexed: 06/07/2023]
Abstract
Bio-hydrogen from microalgae including cyanobacteria has attracted commercial awareness due to its potential as an alternative, reliable and renewable energy source. Photosynthetic hydrogen production from microalgae can be interesting and promising options for clean energy. Advances in hydrogen-fuel-cell technology may attest an eco-friendly way of biofuel production, since, the use of H2 to generate electricity releases only water as a by-product. Progress in genetic/metabolic engineering may significantly enhance the photobiological hydrogen production from microalgae. Manipulation of competing metabolic pathways by modulating the certain key enzymes such as hydrogenase and nitrogenase may enhance the evolution of H2 from photoautotrophic cells. Moreover, biological H2 production at low operating costs is requisite for economic viability. Several photobioreactors have been developed for large-scale biomass and hydrogen production. This review highlights the recent technological progress, enzymes involved and genetic as well as metabolic engineering approaches towards sustainable hydrogen production from microalgae.
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Affiliation(s)
- Wanthanee Khetkorn
- Division of Biology, Faculty of Science and Technology, Rajamangala University of Technology Thanyaburi, Thanyaburi, Pathumthani 12110, Thailand
| | - Rajesh P Rastogi
- Ministry of Environment, Forest and Climate Change, Indira Paryavaran Bhawan, Jor Bagh Road, New Delhi 110 003, India.
| | - Aran Incharoensakdi
- Laboratory of Cyanobacterial Biotechnology, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Phayathai Road, Bangkok 10330, Thailand
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry-Ångström, Uppsala University, Box 523, SE-75120 Uppsala, Sweden
| | - Datta Madamwar
- Department of Biosciences, UGC-Centre of Advanced Study, Sardar Patel University, Vadtal Road, Satellite Campus, Bakrol, Anand, Gujarat 388 315, India
| | - Ashok Pandey
- Center of Innovative and Applied Bioprocessing, C-127 2nd Floor Phase 8 Industrial Area, SAS Nagar, Mohali 160 071, Punjab, India
| | - Christian Larroche
- Labex IMobS3 and Institut Pascal, 4 Avenue Blaise Pascal, TSA 60026/CS 60026, 63178 Aubière Cedex, France
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31
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Enzymatic and spectroscopic properties of a thermostable [NiFe]‑hydrogenase performing H 2-driven NAD +-reduction in the presence of O 2. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2017; 1859:8-18. [PMID: 28970007 DOI: 10.1016/j.bbabio.2017.09.006] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 05/24/2017] [Revised: 08/17/2017] [Accepted: 09/28/2017] [Indexed: 12/18/2022]
Abstract
Biocatalysts that mediate the H2-dependent reduction of NAD+ to NADH are attractive from both a fundamental and applied perspective. Here we present the first biochemical and spectroscopic characterization of an NAD+-reducing [NiFe]‑hydrogenase that sustains catalytic activity at high temperatures and in the presence of O2, which usually acts as an inhibitor. We isolated and sequenced the four structural genes, hoxFUYH, encoding the soluble NAD+-reducing [NiFe]‑hydrogenase (SH) from the thermophilic betaproteobacterium, Hydrogenophilus thermoluteolus TH-1T (Ht). The HtSH was recombinantly overproduced in a hydrogenase-free mutant of the well-studied, H2-oxidizing betaproteobacterium Ralstonia eutropha H16 (Re). The enzyme was purified and characterized with various biochemical and spectroscopic techniques. Highest H2-mediated NAD+ reduction activity was observed at 80°C and pH6.5, and catalytic activity was found to be sustained at low O2 concentrations. Infrared spectroscopic analyses revealed a spectral pattern for as-isolated HtSH that is remarkably different from those of the closely related ReSH and other [NiFe]‑hydrogenases. This indicates an unusual configuration of the oxidized catalytic center in HtSH. Complementary electron paramagnetic resonance spectroscopic analyses revealed spectral signatures similar to related NAD+-reducing [NiFe]‑hydrogenases. This study lays the groundwork for structural and functional analyses of the HtSH as well as application of this enzyme for H2-driven cofactor recycling under oxic conditions at elevated temperatures.
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32
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A Review of Hydrogen Production by Photosynthetic Organisms Using Whole-Cell and Cell-Free Systems. Appl Biochem Biotechnol 2017; 183:503-519. [DOI: 10.1007/s12010-017-2576-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2017] [Accepted: 08/02/2017] [Indexed: 10/18/2022]
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33
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Al-Haj L, Lui YT, Abed RMM, Gomaa MA, Purton S. Cyanobacteria as Chassis for Industrial Biotechnology: Progress and Prospects. Life (Basel) 2016; 6:life6040042. [PMID: 27916886 PMCID: PMC5198077 DOI: 10.3390/life6040042] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2016] [Revised: 11/13/2016] [Accepted: 11/25/2016] [Indexed: 12/24/2022] Open
Abstract
Cyanobacteria hold significant potential as industrial biotechnology (IB) platforms for the production of a wide variety of bio-products ranging from biofuels such as hydrogen, alcohols and isoprenoids, to high-value bioactive and recombinant proteins. Underpinning this technology, are the recent advances in cyanobacterial “omics” research, the development of improved genetic engineering tools for key species, and the emerging field of cyanobacterial synthetic biology. These approaches enabled the development of elaborate metabolic engineering programs aimed at creating designer strains tailored for different IB applications. In this review, we provide an overview of the current status of the fields of cyanobacterial omics and genetic engineering with specific focus on the current molecular tools and technologies that have been developed in the past five years. The paper concludes by giving insights on future commercial applications of cyanobacteria and highlights the challenges that need to be addressed in order to make cyanobacterial industrial biotechnology more feasible in the near future.
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Affiliation(s)
- Lamya Al-Haj
- Biology Department, College of Science, Sultan Qaboos University, Al-Khoud, P.O. Box 36, Muscat 123, Oman.
| | - Yuen Tin Lui
- Institute of Structural & Molecular Biology, University College London, London WC1E 6BT, UK.
| | - Raeid M M Abed
- Biology Department, College of Science, Sultan Qaboos University, Al-Khoud, P.O. Box 36, Muscat 123, Oman.
| | - Mohamed A Gomaa
- Biology Department, College of Science, Sultan Qaboos University, Al-Khoud, P.O. Box 36, Muscat 123, Oman.
| | - Saul Purton
- Institute of Structural & Molecular Biology, University College London, London WC1E 6BT, UK.
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34
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Bland E, Angenent LT. Pigment-targeted light wavelength and intensity promotes efficient photoautotrophic growth of Cyanobacteria. BIORESOURCE TECHNOLOGY 2016; 216:579-86. [PMID: 27285573 DOI: 10.1016/j.biortech.2016.05.116] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Revised: 05/27/2016] [Accepted: 05/28/2016] [Indexed: 05/09/2023]
Abstract
A consensus is lacking whether monochromatic rather than broad-spectrum illumination is more efficient for photosynthetic microbe production platforms. Light wavelength and intensity were tuned to pigment composition for growth of the Cyanobacterium Synechocystis PCC 6803. Phycocyanin (PC)-targeting LEDs (620nm) provided more than 6times the peak efficiency of white LEDs, with peak efficiency growth rates of 0.063h(-1) at 81μEm(-2)s(-1) and 0.039h(-1) at 126μEm(-2)s(-1) for red and white LEDs, respectively. Chlorophyll a (Chl a)-targeting LEDs (680- and 440-nm) performed poorly. Indeed, 10 times greater mass abundance was observed for PC than Chl a. PC levels did not change while Chl a levels decreased when Synechocystis transitioned from white light at 50μEm(-2)s(-1) to 250μEm(-2)s(-1) with 620nm, 680nm, or white LEDs. This work demonstrates that light wavelengths and intensity need to be optimized for each strain.
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Affiliation(s)
- Erik Bland
- Department of Biological and Environmental Engineering, 226 Riley-Robb Hall, Cornell University, Ithaca, NY 14853, USA
| | - Largus T Angenent
- Department of Biological and Environmental Engineering, 226 Riley-Robb Hall, Cornell University, Ithaca, NY 14853, USA; Faculty fellow, Atkinson Center for a Sustainable Future, 200 Rice Hall, Cornell University, Ithaca, NY 14853, USA.
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35
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Peltier G, Aro EM, Shikanai T. NDH-1 and NDH-2 Plastoquinone Reductases in Oxygenic Photosynthesis. ANNUAL REVIEW OF PLANT BIOLOGY 2016; 67:55-80. [PMID: 26735062 DOI: 10.1146/annurev-arplant-043014-114752] [Citation(s) in RCA: 169] [Impact Index Per Article: 21.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Oxygenic photosynthesis converts solar energy into chemical energy in the chloroplasts of plants and microalgae as well as in prokaryotic cyanobacteria using a complex machinery composed of two photosystems and both membrane-bound and soluble electron carriers. In addition to the major photosynthetic complexes photosystem II (PSII), cytochrome b6f, and photosystem I (PSI), chloroplasts also contain minor components, including a well-conserved type I NADH dehydrogenase (NDH-1) complex that functions in close relationship with photosynthesis and likewise originated from the endosymbiotic cyanobacterial ancestor. Some plants and many microalgal species have lost plastidial ndh genes and a functional NDH-1 complex during evolution, and studies have suggested that a plastidial type II NADH dehydrogenase (NDH-2) complex substitutes for the electron transport activity of NDH-1. However, although NDH-1 was initially thought to use NAD(P)H as an electron donor, recent research has demonstrated that both chloroplast and cyanobacterial NDH-1s oxidize reduced ferredoxin. We discuss more recent findings related to the biochemical composition and activity of NDH-1 and NDH-2 in relation to the physiology and regulation of photosynthesis, particularly focusing on their roles in cyclic electron flow around PSI, chlororespiration, and acclimation to changing environments.
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Affiliation(s)
- Gilles Peltier
- Institute of Environmental Biology and Biotechnology, CEA, CNRS, Aix-Marseille University, CEA Cadarache, 13018 Saint-Paul-lès-Durance, France;
| | - Eva-Mari Aro
- Department of Biochemistry, University of Turku, 20014 Turku, Finland;
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36
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Qian X, Kumaraswamy GK, Zhang S, Gates C, Ananyev GM, Bryant DA, Dismukes GC. Inactivation of nitrate reductase alters metabolic branching of carbohydrate fermentation in the cyanobacterium Synechococcus sp. strain PCC 7002. Biotechnol Bioeng 2015; 113:979-88. [PMID: 26479976 DOI: 10.1002/bit.25862] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2015] [Revised: 10/07/2015] [Accepted: 10/13/2015] [Indexed: 11/07/2022]
Abstract
To produce cellular energy, cyanobacteria reduce nitrate as the preferred pathway over proton reduction (H2 evolution) by catabolizing glycogen under dark anaerobic conditions. This competition lowers H2 production by consuming a large fraction of the reducing equivalents (NADPH and NADH). To eliminate this competition, we constructed a knockout mutant of nitrate reductase, encoded by narB, in Synechococcus sp. PCC 7002. As expected, ΔnarB was able to take up intracellular nitrate but was unable to reduce it to nitrite or ammonia, and was unable to grow photoautotrophically on nitrate. During photoautotrophic growth on urea, ΔnarB significantly redirects biomass accumulation into glycogen at the expense of protein accumulation. During subsequent dark fermentation, metabolite concentrations--both the adenylate cellular energy charge (∼ATP) and the redox poise (NAD(P)H/NAD(P))--were independent of nitrate availability in ΔnarB, in contrast to the wild type (WT) control. The ΔnarB strain diverted more reducing equivalents from glycogen catabolism into reduced products, mainly H2 and d-lactate, by 6-fold (2.8% yield) and 2-fold (82.3% yield), respectively, than WT. Continuous removal of H2 from the fermentation medium (milking) further boosted net H2 production by 7-fold in ΔnarB, at the expense of less excreted lactate, resulting in a 49-fold combined increase in the net H2 evolution rate during 2 days of fermentation compared to the WT. The absence of nitrate reductase eliminated the inductive effect of nitrate addition on rerouting carbohydrate catabolism from glycolysis to the oxidative pentose phosphate (OPP) pathway, indicating that intracellular redox poise and not nitrate itself acts as the control switch for carbon flux branching between pathways.
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Affiliation(s)
- Xiao Qian
- Waksman Institute, Rutgers University, New Brunswick, New Jersey.,Department of Microbiology and Biochemistry, Rutgers University, New Brunswick, New Jersey
| | | | - Shuyi Zhang
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, Pennsylvania
| | - Colin Gates
- Waksman Institute, Rutgers University, New Brunswick, New Jersey
| | | | - Donald A Bryant
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, Pennsylvania.,Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana
| | - G Charles Dismukes
- Waksman Institute, Rutgers University, New Brunswick, New Jersey. .,Department of Chemistry and Biological Chemistry, Rutgers University, New Brunswick, New Jersey, 08901.
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37
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Photosynthetic, respiratory and extracellular electron transport pathways in cyanobacteria. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2015; 1857:247-55. [PMID: 26498190 DOI: 10.1016/j.bbabio.2015.10.007] [Citation(s) in RCA: 122] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2015] [Revised: 10/09/2015] [Accepted: 10/14/2015] [Indexed: 01/05/2023]
Abstract
Cyanobacteria have evolved elaborate electron transport pathways to carry out photosynthesis and respiration, and to dissipate excess energy in order to limit cellular damage. Our understanding of the complexity of these systems and their role in allowing cyanobacteria to cope with varying environmental conditions is rapidly improving, but many questions remain. We summarize current knowledge of cyanobacterial electron transport pathways, including the possible roles of alternative pathways in photoprotection. We describe extracellular electron transport, which is as yet poorly understood. Biological photovoltaic devices, which measure electron output from cells, and which have been proposed as possible means of renewable energy generation, may be valuable tools in understanding cyanobacterial electron transfer pathways, and enhanced understanding of electron transfer may allow improvements in the efficiency of power output. This article is part of a Special Issue entitled Organization and dynamics of bioenergetic systems in bacteria, edited by Conrad Mullineaux.
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Ghirardi ML. Implementation of photobiological H2 production: the O 2 sensitivity of hydrogenases. PHOTOSYNTHESIS RESEARCH 2015; 125:383-93. [PMID: 26022106 DOI: 10.1007/s11120-015-0158-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2015] [Accepted: 05/13/2015] [Indexed: 05/10/2023]
Abstract
The search for the ultimate carbon-free fuel has intensified in recent years, with a major focus on photoproduction of H2. Biological sources of H2 include oxygenic photosynthetic green algae and cyanobacteria, both of which contain hydrogenase enzymes. Although algal and cyanobacterial hydrogenases perform the same enzymatic reaction through metallo-clusters, their hydrogenases have evolved separately, are expressed differently (transcription of algal hydrogenases is anaerobically induced, while bacterial hydrogenases are constitutively expressed), and display different sensitivity to O2 inactivation. Among various physiological factors, the sensitivity of hydrogenases to O2 has been one of the major factors preventing implementation of biological systems for commercial production of renewable H2. This review addresses recent strategies aimed at engineering increased O2 tolerance into hydrogenases (as of now mainly unsuccessful), as well as towards the development of methods to bypass the O2 sensitivity of hydrogenases (successful but still yielding low solar conversion efficiencies). The author concludes with a description of current approaches from various laboratories to incorporate multiple genetic traits into either algae or cyanobacteria to jointly address limiting factors other than the hydrogenase O2 sensitivity and achieve more sustained H2 photoproduction activity.
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Affiliation(s)
- Maria L Ghirardi
- National Renewable Energy Laboratory, 15013 Denver West Pkway, Golden, CO, 80401, USA,
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39
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[NiFe]-hydrogenase is essential for cyanobacterium Synechocystis sp. PCC 6803 aerobic growth in the dark. Sci Rep 2015. [PMID: 26215212 PMCID: PMC4517062 DOI: 10.1038/srep12424] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
Abstract
The cyanobacterium Synechocystis sp. PCC 6803 has a bidirectional [NiFe]-hydrogenase (Hox hydrogenase) which reversibly reduces protons to H2. This enzyme is composed of a hydrogenase domain and a diaphorase moiety, which is distinctly homologous to the NADH input module of mitochondrial respiratory Complex I. Hox hydrogenase physiological function is still unclear, since it is not required for Synechocystis fitness under standard growth conditions. We analyzed the phenotype under prolonged darkness of three Synechocystis knock-out strains, lacking either Hox hydrogenase (ΔHoxE-H) or one of the proteins responsible for the assembly of its NiFe active site (ΔHypA1 and ΔHypB1). We found that Hox hydrogenase is required for Synechocystis growth under this condition, regardless of the functional status of its catalytic site, suggesting an additional role beside hydrogen metabolism. Moreover, quantitative proteomic analyses revealed that the expression levels of several subunits of the respiratory NADPH/plastoquinone oxidoreductase (NDH-1) are reduced when Synechocystis is grown in the dark. Our findings suggest that the Hox hydrogenase could contribute to electron transport regulation when both photosynthetic and respiratory pathways are down-regulated, and provide a possible explanation for the close evolutionary relationship between mitochondrial respiratory Complex I and cyanobacterial [NiFe]-hydrogenases.
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40
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Godaux D, Bailleul B, Berne N, Cardol P. Induction of Photosynthetic Carbon Fixation in Anoxia Relies on Hydrogenase Activity and Proton-Gradient Regulation-Like1-Mediated Cyclic Electron Flow in Chlamydomonas reinhardtii. PLANT PHYSIOLOGY 2015; 168:648-58. [PMID: 25931521 PMCID: PMC4453779 DOI: 10.1104/pp.15.00105] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2015] [Accepted: 04/30/2015] [Indexed: 05/19/2023]
Abstract
The model green microalga Chlamydomonas reinhardtii is frequently subject to periods of dark and anoxia in its natural environment. Here, by resorting to mutants defective in the maturation of the chloroplastic oxygen-sensitive hydrogenases or in Proton-Gradient Regulation-Like1 (PGRL1)-dependent cyclic electron flow around photosystem I (PSI-CEF), we demonstrate the sequential contribution of these alternative electron flows (AEFs) in the reactivation of photosynthetic carbon fixation during a shift from dark anoxia to light. At light onset, hydrogenase activity sustains a linear electron flow from photosystem II, which is followed by a transient PSI-CEF in the wild type. By promoting ATP synthesis without net generation of photosynthetic reductants, the two AEF are critical for restoration of the capacity for carbon dioxide fixation in the light. Our data also suggest that the decrease in hydrogen evolution with time of illumination might be due to competition for reduced ferredoxins between ferredoxin-NADP(+) oxidoreductase and hydrogenases, rather than due to the sensitivity of hydrogenase activity to oxygen. Finally, the absence of the two alternative pathways in a double mutant pgrl1 hydrogenase maturation factor G-2 is detrimental for photosynthesis and growth and cannot be compensated by any other AEF or anoxic metabolic responses. This highlights the role of hydrogenase activity and PSI-CEF in the ecological success of microalgae in low-oxygen environments.
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Affiliation(s)
- Damien Godaux
- Department of Life Sciences, Genetics and Physiology of Microalgae, PhytoSYSTEMS, University of Liège, B-4000 Liège, Belgium
| | - Benjamin Bailleul
- Department of Life Sciences, Genetics and Physiology of Microalgae, PhytoSYSTEMS, University of Liège, B-4000 Liège, Belgium
| | - Nicolas Berne
- Department of Life Sciences, Genetics and Physiology of Microalgae, PhytoSYSTEMS, University of Liège, B-4000 Liège, Belgium
| | - Pierre Cardol
- Department of Life Sciences, Genetics and Physiology of Microalgae, PhytoSYSTEMS, University of Liège, B-4000 Liège, Belgium
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41
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Khanna N, Lindblad P. Cyanobacterial hydrogenases and hydrogen metabolism revisited: recent progress and future prospects. Int J Mol Sci 2015; 16:10537-61. [PMID: 26006225 PMCID: PMC4463661 DOI: 10.3390/ijms160510537] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2015] [Revised: 04/29/2015] [Accepted: 04/30/2015] [Indexed: 11/25/2022] Open
Abstract
Cyanobacteria have garnered interest as potential cell factories for hydrogen production. In conjunction with photosynthesis, these organisms can utilize inexpensive inorganic substrates and solar energy for simultaneous biosynthesis and hydrogen evolution. However, the hydrogen yield associated with these organisms remains far too low to compete with the existing chemical processes. Our limited understanding of the cellular hydrogen production pathway is a primary setback in the potential scale-up of this process. In this regard, the present review discusses the recent insight around ferredoxin/flavodoxin as the likely electron donor to the bidirectional Hox hydrogenase instead of the generally accepted NAD(P)H. This may have far reaching implications in powering solar driven hydrogen production. However, it is evident that a successful hydrogen-producing candidate would likely integrate enzymatic traits from different species. Engineering the [NiFe] hydrogenases for optimal catalytic efficiency or expression of a high turnover [FeFe] hydrogenase in these photo-autotrophs may facilitate the development of strains to reach target levels of biohydrogen production in cyanobacteria. The fundamental advancements achieved in these fields are also summarized in this review.
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Affiliation(s)
- Namita Khanna
- Microbial Chemistry, Department of Chemistry-Ångström Laboratory, Uppsala University, Box 523, Uppsala SE-75120, Sweden.
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry-Ångström Laboratory, Uppsala University, Box 523, Uppsala SE-75120, Sweden.
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Hoffmann D, Maldonado J, Wojciechowski MF, Garcia-Pichel F. Hydrogen export from intertidal cyanobacterial mats: sources, fluxes and the influence of community composition. Environ Microbiol 2015; 17:3738-53. [DOI: 10.1111/1462-2920.12769] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2014] [Accepted: 12/23/2014] [Indexed: 11/28/2022]
Affiliation(s)
- Dörte Hoffmann
- School of Life Sciences; Arizona State University; Tempe AZ 85287-4501 USA
| | - Juan Maldonado
- School of Life Sciences; Arizona State University; Tempe AZ 85287-4501 USA
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Advances in the function and regulation of hydrogenase in the cyanobacterium Synechocystis PCC6803. Int J Mol Sci 2014; 15:19938-51. [PMID: 25365180 PMCID: PMC4264147 DOI: 10.3390/ijms151119938] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2014] [Revised: 10/15/2014] [Accepted: 10/21/2014] [Indexed: 11/16/2022] Open
Abstract
In order to use cyanobacteria for the biological production of hydrogen, it is important to thoroughly study the function and the regulation of the hydrogen-production machine in order to better understand its role in the global cell metabolism and identify bottlenecks limiting H2 production. Most of the recent advances in our understanding of the bidirectional [Ni-Fe] hydrogenase (Hox) came from investigations performed in the widely-used model cyanobacterium Synechocystis PCC6803 where Hox is the sole enzyme capable of combining electrons with protons to produce H2 under specific conditions. Recent findings suggested that the Hox enzyme can receive electrons from not only NAD(P)H as usually shown, but also, or even preferentially, from ferredoxin. Furthermore, plasmid-encoded functions and glutathionylation (the formation of a mixed-disulfide between the cysteines residues of a protein and the cysteine residue of glutathione) are proposed as possible new players in the function and regulation of hydrogen production.
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Burroughs NJ, Boehm M, Eckert C, Mastroianni G, Spence EM, Yu J, Nixon PJ, Appel J, Mullineaux CW, Bryan SJ. Solar powered biohydrogen production requires specific localization of the hydrogenase. ENERGY & ENVIRONMENTAL SCIENCE 2014; 7:3791-3800. [PMID: 26339289 PMCID: PMC4535174 DOI: 10.1039/c4ee02502d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2014] [Accepted: 09/04/2014] [Indexed: 05/15/2023]
Abstract
Cyanobacteria contain a bidirectional [NiFe] hydrogenase which transiently produces hydrogen upon exposure of anoxic cells to light, potentially acting as a "valve" releasing excess electrons from the electron transport chain. However, its interaction with the photosynthetic electron transport chain remains unclear. By GFP-tagging the HoxF diaphorase subunit we show that the hydrogenase is thylakoid associated, comprising a population dispersed uniformly through the thylakoids and a subpopulation localized to discrete puncta in the distal thylakoid. Thylakoid localisation of both the HoxH and HoxY hydrogenase subunits is confirmed by immunogold electron microscopy. The diaphorase HoxE subunit is essential for recruitment to the dispersed thylakoid population, potentially anchoring the hydrogenase to the membrane, but aggregation to puncta occurs through a distinct HoxE-independent mechanism. Membrane association does not require NDH-1. Localization is dynamic on a scale of minutes, with anoxia and high light inducing a significant redistribution between these populations in favour of puncta. Since HoxE is essential for access to its electron donor, electron supply to the hydrogenase depends on a physiologically controlled localization, potentially offering a new avenue to enhance photosynthetic hydrogen production by exploiting localization/aggregation signals.
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Affiliation(s)
- Nigel J Burroughs
- Systems Biology Centre , Coventry House , University of Warwick , Coventry , CV4 7AL , UK
| | - Marko Boehm
- Imperial College London , South Kensington Campus , London , SW7 2AZ , UK
| | - Carrie Eckert
- Biosciences Centre , National Renewable Energy Laboratory , Golden , Colorado 80401 , USA ; Renewable and Sustainable Energy Institute, University of Colorado Boulder , Boulder , CO 80309 , USA
| | - Giulia Mastroianni
- School of Biological and Chemical Sciences , Queen Mary University of London , Mile End Road , London , E1 4NS , UK .
| | - Edward M Spence
- Pharmaceutical Science Division , King's College London , Franklin-Wilkins Building, 150 Stamford Street , London , SE1 9NH , UK
| | - Jianfeng Yu
- Imperial College London , South Kensington Campus , London , SW7 2AZ , UK
| | - Peter J Nixon
- Imperial College London , South Kensington Campus , London , SW7 2AZ , UK
| | - Jens Appel
- Botanical Institute , University of Kiel , Am Botanischen Garten 1-9 , 24118 Kiel , Germany
| | - Conrad W Mullineaux
- School of Biological and Chemical Sciences , Queen Mary University of London , Mile End Road , London , E1 4NS , UK .
| | - Samantha J Bryan
- School of Biological and Chemical Sciences , Queen Mary University of London , Mile End Road , London , E1 4NS , UK .
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Hydrogen photoproduction by immobilized n2-fixing cyanobacteria: understanding the role of the uptake hydrogenase in the long-term process. Appl Environ Microbiol 2014; 80:5807-17. [PMID: 25015894 DOI: 10.1128/aem.01776-14] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
We have investigated two approaches to enhance and extend H2 photoproduction yields in heterocystous, N2-fixing cyanobacteria entrapped in thin alginate films. In the first approach, periodic CO2 supplementation was provided to alginate-entrapped, N-deprived cells. N deprivation led to the inhibition of photosynthetic activity in vegetative cells and the attenuation of H2 production over time. Our results demonstrated that alginate-entrapped ΔhupL cells were considerably more sensitive to high light intensity, N deficiency, and imbalances in C/N ratios than wild-type cells. In the second approach, Anabaena strain PCC 7120, its ΔhupL mutant, and Calothrix strain 336/3 films were supplemented with N2 by periodic treatments of air, or air plus CO2. These treatments restored the photosynthetic activity of the cells and led to a high level of H2 production in Calothrix 336/3 and ΔhupL cells (except for the treatment air plus CO2) but not in the Anabaena PCC 7120 strain (for which H2 yields did not change after air treatments). The highest H2 yield was obtained by the air treatment of ΔhupL cells. Notably, the supplementation of CO2 under an air atmosphere led to prominent symptoms of N deficiency in the ΔhupL strain but not in the wild-type strain. We propose that uptake hydrogenase activity in heterocystous cyanobacteria not only supports nitrogenase activity by removing excess O2 from heterocysts but also indirectly protects the photosynthetic apparatus of vegetative cells from photoinhibition, especially under stressful conditions that cause an imbalance in the C/N ratio in cells.
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Dahmen I, Chtourou H, Jebali A, Daassi D, Karray F, Hassairi I, Sayadi S, Abdelkafi S, Dhouib A. Optimisation of the critical medium components for better growth of Picochlorum sp. and the role of stressful environments for higher lipid production. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2014; 94:1628-1638. [PMID: 24301903 DOI: 10.1002/jsfa.6470] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2013] [Revised: 10/09/2013] [Accepted: 11/04/2013] [Indexed: 06/02/2023]
Abstract
BACKGROUND Coastal countries that suffer from a scarcity of water, such as Tunisia, have to cultivate marine microalgae on non-arable land in order to produce feedstock and overcome their demands of nutrition and energy. In this framework, a green microalga, CTM 20019, was isolated, identified as Picochlorum sp. and tested for its lipid production. RESULTS The dry weight of Picochlorum sp. is composed of 163 g kg(-1) lipids, 225 g kg(-1) total sugars, 440 g kg(-1) proteins and 112 g kg(-1) ash rich in potassium, calcium, iron, magnesium and zinc. Gas chromatography-mass spectrometry analysis showed that the main fatty acids were palmitic acid (29%), linolenic acid (26.5%), linoleic acid (23.5%), hexadecatrienoic acid (11%) and hexadecadienoic acid (8.5%). As it is known that culture conditions greatly influence the composition of microalgae, the experiments were designed to optimise the composition of the medium in order to increase Picochlorum sp. growth from OD680nm = 0.53 to OD680nm = 2.2 and lipid accumulation from 163 g kg(-1) to 190 g kg(-1) . The highest lipid contents of 570 and 585 g kg(-1) were achieved under phosphate starvation and sodium carbonate supplementation, respectively. Under these conditions, the fatty acid profile is dominated by mono-unsaturated and polyunsaturated acids, and is therefore suitable for aqua-culture feeding. However, under high salinity, growth and lipid synthesis are inhibited, and the fatty acids are saturate, and the product is therefore suitable for biodiesel. CONCLUSION This high lipid content rich in essential fatty acids, omega-6 and omega-3, endorses this wild strain of Picochlorum sp. as a promising feedstock for aqua-culture and human nutrition or for the production of biodiesel. © 2013 Society of Chemical Industry.
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Affiliation(s)
- Ines Dahmen
- Laboratory of Environmental Bioprocesses, Centre of Biotechnology of Sfax, University of Sfax, Sidi Mansour Road Km 6, P.O. Box «1177», 3018, Sfax, Tunisia
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Engineering Synechocystis PCC6803 for hydrogen production: influence on the tolerance to oxidative and sugar stresses. PLoS One 2014; 9:e89372. [PMID: 24586727 PMCID: PMC3933540 DOI: 10.1371/journal.pone.0089372] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2013] [Accepted: 01/20/2014] [Indexed: 11/23/2022] Open
Abstract
In the prospect of engineering cyanobacteria for the biological photoproduction of hydrogen, we have studied the hydrogen production machine in the model unicellular strain Synechocystis PCC6803 through gene deletion, and overexpression (constitutive or controlled by the growth temperature). We demonstrate that the hydrogenase-encoding hoxEFUYH operon is dispensable to standard photoautotrophic growth in absence of stress, and it operates in cell defense against oxidative (H2O2) and sugar (glucose and glycerol) stresses. Furthermore, we showed that the simultaneous over-production of the proteins HoxEFUYH and HypABCDE (assembly of hydrogenase), combined to an increase in nickel availability, led to an approximately 20-fold increase in the level of active hydrogenase. These novel results and mutants have major implications for those interested in hydrogenase, hydrogen production and redox metabolism, and their connections with environmental conditions.
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Engineering Hydrogenases for H2 Production: Bolts and Goals. MICROBIAL BIOENERGY: HYDROGEN PRODUCTION 2014. [DOI: 10.1007/978-94-017-8554-9_3] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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Mullineaux CW. Electron transport and light-harvesting switches in cyanobacteria. FRONTIERS IN PLANT SCIENCE 2014; 5:7. [PMID: 24478787 PMCID: PMC3896814 DOI: 10.3389/fpls.2014.00007] [Citation(s) in RCA: 74] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2013] [Accepted: 01/06/2014] [Indexed: 05/19/2023]
Abstract
Cyanobacteria possess multiple mechanisms for regulating the pathways of photosynthetic and respiratory electron transport. Electron transport may be regulated indirectly by controlling the transfer of excitation energy from the light-harvesting complexes, or it may be more directly regulated by controlling the stoichiometry, localization, and interactions of photosynthetic and respiratory electron transport complexes. Regulation of the extent of linear vs. cyclic electron transport is particularly important for controlling the redox balance of the cell. This review discusses what is known of the regulatory mechanisms and the timescales on which they occur, with particular regard to the structural reorganization needed and the constraints imposed by the limited mobility of membrane-integral proteins in the crowded thylakoid membrane. Switching mechanisms requiring substantial movement of integral thylakoid membrane proteins occur on slower timescales than those that require the movement only of cytoplasmic or extrinsic membrane proteins. This difference is probably due to the restricted diffusion of membrane-integral proteins. Multiple switching mechanisms may be needed to regulate electron transport on different timescales.
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Affiliation(s)
- Conrad W. Mullineaux
- *Correspondence: ConradW. Mullineaux, School of Biological and Chemical Sciences, Queen Mary, University of London, Mile End Road, London E1 4NS, UK e-mail:
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Tsygankov A, Kosourov S. Immobilization of Photosynthetic Microorganisms for Efficient Hydrogen Production. MICROBIAL BIOENERGY: HYDROGEN PRODUCTION 2014. [DOI: 10.1007/978-94-017-8554-9_14] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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