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For: Weis-Garcia F, Besmer E, Sawchuk DJ, Yu W, Hu Y, Cassard S, Nussenzweig MC, Cortes P. V(D)J recombination: in vitro coding joint formation. Mol Cell Biol 1997;17:6379-85. [PMID: 9343399 PMCID: PMC232489 DOI: 10.1128/mcb.17.11.6379] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]  Open
Number Cited by Other Article(s)
1
Villa A, Notarangelo LD. RAG gene defects at the verge of immunodeficiency and immune dysregulation. Immunol Rev 2019;287:73-90. [PMID: 30565244 PMCID: PMC6309314 DOI: 10.1111/imr.12713] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 08/21/2018] [Indexed: 12/18/2022]
2
Graham TGW, Walter JC, Loparo JJ. Ensemble and Single-Molecule Analysis of Non-Homologous End Joining in Frog Egg Extracts. Methods Enzymol 2017. [PMID: 28645371 DOI: 10.1016/bs.mie.2017.03.020] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
3
Lu H, Shimazaki N, Raval P, Gu J, Watanabe G, Schwarz K, Swanson PC, Lieber MR. A biochemically defined system for coding joint formation in V(D)J recombination. Mol Cell 2008;31:485-497. [PMID: 18722175 DOI: 10.1016/j.molcel.2008.05.029] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2008] [Revised: 03/13/2008] [Accepted: 05/29/2008] [Indexed: 12/14/2022]
4
Roberts SA, Ramsden DA. Loading of the nonhomologous end joining factor, Ku, on protein-occluded DNA ends. J Biol Chem 2007;282:10605-13. [PMID: 17289670 DOI: 10.1074/jbc.m611125200] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
5
Yuan SW, Agard EA, Larijani M, Wu GE. Coding joint diversity in mature and immature B-cell lines. Scand J Immunol 2005;62 Suppl 1:114-8. [PMID: 15953194 DOI: 10.1111/j.1365-3083.2005.01619.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Yu K, Taghva A, Ma Y, Lieber MR. Kinetic analysis of the nicking and hairpin formation steps in V(D)J recombination. DNA Repair (Amst) 2004;3:67-75. [PMID: 14697761 DOI: 10.1016/j.dnarep.2003.09.006] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
7
Schlissel MS. Does artemis end the hunt for the hairpin-opening activity in V(D)J recombination? Cell 2002;109:1-4. [PMID: 11955439 DOI: 10.1016/s0092-8674(02)00694-3] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
8
Yu K, Taghva A, Lieber MR. The cleavage efficiency of the human immunoglobulin heavy chain VH elements by the RAG complex: implications for the immune repertoire. J Biol Chem 2002;277:5040-6. [PMID: 11739391 DOI: 10.1074/jbc.m109772200] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
9
Lin IG, Han L, Taghva A, O'Brien LE, Hsieh CL. Murine de novo methyltransferase Dnmt3a demonstrates strand asymmetry and site preference in the methylation of DNA in vitro. Mol Cell Biol 2002;22:704-23. [PMID: 11784849 PMCID: PMC133553 DOI: 10.1128/mcb.22.3.704-723.2002] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2001] [Accepted: 10/23/2001] [Indexed: 11/20/2022]  Open
10
Fugmann SD. RAG1 and RAG2 in V(D)J recombination and transposition. Immunol Res 2002;23:23-39. [PMID: 11417858 DOI: 10.1385/ir:23:1:23] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
11
Brown ML, Lew S, Chang Y. The scid recombination-inducible cell line: a model to study DNA-PK-independent V(D)J recombination. Immunol Lett 2000;75:21-6. [PMID: 11163862 DOI: 10.1016/s0165-2478(00)00283-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
12
Yu K, Lieber MR. The nicking step in V(D)J recombination is independent of synapsis: implications for the immune repertoire. Mol Cell Biol 2000;20:7914-21. [PMID: 11027262 PMCID: PMC86402 DOI: 10.1128/mcb.20.21.7914-7921.2000] [Citation(s) in RCA: 58] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
13
Aidinis V, Dias DC, Gomez CA, Bhattacharyya D, Spanopoulou E, Santagata S. Definition of minimal domains of interaction within the recombination-activating genes 1 and 2 recombinase complex. JOURNAL OF IMMUNOLOGY (BALTIMORE, MD. : 1950) 2000;164:5826-32. [PMID: 10820261 DOI: 10.4049/jimmunol.164.11.5826] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
14
Yu K, Lieber MR. Mechanistic basis for coding end sequence effects in the initiation of V(D)J recombination. Mol Cell Biol 1999;19:8094-102. [PMID: 10567535 PMCID: PMC84894 DOI: 10.1128/mcb.19.12.8094] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
15
Labhart P. Nonhomologous DNA end joining in cell-free systems. EUROPEAN JOURNAL OF BIOCHEMISTRY 1999;265:849-61. [PMID: 10518778 DOI: 10.1046/j.1432-1327.1999.00805.x] [Citation(s) in RCA: 57] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
16
Aidinis V, Bonaldi T, Beltrame M, Santagata S, Bianchi ME, Spanopoulou E. The RAG1 homeodomain recruits HMG1 and HMG2 to facilitate recombination signal sequence binding and to enhance the intrinsic DNA-bending activity of RAG1-RAG2. Mol Cell Biol 1999;19:6532-42. [PMID: 10490593 PMCID: PMC84623 DOI: 10.1128/mcb.19.10.6532] [Citation(s) in RCA: 104] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]  Open
17
Shockett PE, Schatz DG. DNA hairpin opening mediated by the RAG1 and RAG2 proteins. Mol Cell Biol 1999;19:4159-66. [PMID: 10330156 PMCID: PMC104375 DOI: 10.1128/mcb.19.6.4159] [Citation(s) in RCA: 98] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]  Open
18
Labhart P. Ku-dependent nonhomologous DNA end joining in Xenopus egg extracts. Mol Cell Biol 1999;19:2585-93. [PMID: 10082524 PMCID: PMC84051 DOI: 10.1128/mcb.19.4.2585] [Citation(s) in RCA: 62] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
19
Haruta H, Tachibana H, Yamada K. Serum starvation induced secondary V lambda J lambda rearrangement in a human plasma B cell line. Mol Immunol 1999;36:177-85. [PMID: 10403483 DOI: 10.1016/s0161-5890(99)00028-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
20
Chang Y, Brown ML. Formation of coding joints in V(D)J recombination-inducible severe combined immune deficient pre-B cell lines. Proc Natl Acad Sci U S A 1999;96:191-6. [PMID: 9874794 PMCID: PMC15115 DOI: 10.1073/pnas.96.1.191] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
21
Besmer E, Mansilla-Soto J, Cassard S, Sawchuk DJ, Brown G, Sadofsky M, Lewis SM, Nussenzweig MC, Cortes P. Hairpin coding end opening is mediated by RAG1 and RAG2 proteins. Mol Cell 1998;2:817-28. [PMID: 9885569 DOI: 10.1016/s1097-2765(00)80296-8] [Citation(s) in RCA: 111] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
22
Hempel WM, Stanhope-Baker P, Mathieu N, Huang F, Schlissel MS, Ferrier P. Enhancer control of V(D)J recombination at the TCRbeta locus: differential effects on DNA cleavage and joining. Genes Dev 1998;12:2305-17. [PMID: 9694796 PMCID: PMC317053 DOI: 10.1101/gad.12.15.2305] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/1998] [Accepted: 06/03/1998] [Indexed: 12/30/2022]
23
Villa A, Santagata S, Bozzi F, Giliani S, Frattini A, Imberti L, Gatta LB, Ochs HD, Schwarz K, Notarangelo LD, Vezzoni P, Spanopoulou E. Partial V(D)J recombination activity leads to Omenn syndrome. Cell 1998;93:885-96. [PMID: 9630231 DOI: 10.1016/s0092-8674(00)81448-8] [Citation(s) in RCA: 323] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
24
Grawunder U, West RB, Lieber MR. Antigen receptor gene rearrangement. Curr Opin Immunol 1998;10:172-80. [PMID: 9602306 DOI: 10.1016/s0952-7915(98)80246-x] [Citation(s) in RCA: 87] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
25
Schlissel MS. Structure of nonhairpin coding-end DNA breaks in cells undergoing V(D)J recombination. Mol Cell Biol 1998;18:2029-37. [PMID: 9528775 PMCID: PMC121433 DOI: 10.1128/mcb.18.4.2029] [Citation(s) in RCA: 70] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/1997] [Accepted: 11/24/1997] [Indexed: 02/07/2023]  Open
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