Regulation of induced cellulase synthesis in Pyrenochaeta terrestris Gorenz et al. by utilizable carbon compounds

Changes in Soil Organic Carbon Fractions and Fungal Communities, Subsequent to Different Management Practices in Moso Bamboo Plantations

Moso bamboo (Phyllostachys pubescens) has an extremely fast growth rate and major carbon sequestration potential. However, little information is available on the dynamics of soil C accumulation and fungi communities related to different management practices. Here, we investigated changes in the soil organic carbon (SOC) fractions and fungal communities of a Moso bamboo plantation under three different management practices (M0: undisturbed; M1: extensively managed; and M2: intensively managed). Compared with M0, SOC levels were reduced by 41.2% and 71.5% in M1 and M2, respectively; furthermore, four SOC fractions (C1: very labile; C2: labile; C3: less labile; and C4: nonlabile) and the carbon management index (CMI) were also significantly reduced by plantation management. These practices further altered fungal communities, for example, by increasing Basidiomycota and Mortierellomycota, and by decreasing Ascomycota and Rozellomycota. Pyrenochaeta, Mortierella, Saitozyma, and Cladophialophora were identified as keystone taxa. Soil fungal communities were significantly related to the pH, NH₄-N, AP, C3, and the C4 fractions of SOC. Random forest modeling identified soil C3 and Mortierella as the most important predictors of the CMI. Our results suggest that reducing human interference would be beneficial for fungal community improvement and C sequestration in Moso bamboo plantations.

Importance of Soil Temperature for the Growth of Temperate Crops under a Tropical Climate and Functional Role of Soil Microbial Diversity

A soil cooling system that prepares soil for temperate soil temperatures for the growth of temperate crops under a tropical climate is described herein. Temperate agriculture has been threatened by the negative impact of temperature increases caused by climate change. Soil temperature closely correlates with the growth of temperate crops, and affects plant processes and soil microbial diversity. The present study focuses on the effects of soil temperatures on lettuce growth and soil microbial diversity that maintains the growth of lettuce at low soil temperatures. A model temperate crop, loose leaf lettuce, was grown on eutrophic soil under soil cooling and a number of parameters, such as fresh weight, height, the number of leaves, and root length, were evaluated upon harvest. Under soil cooling, significant differences were observed in the average fresh weight (P<0.05) and positive development of the roots, shoots, and leaves of lettuce. Janthinobacterium (8.142%), Rhodoplanes (1.991%), Arthrospira (1.138%), Flavobacterium (0.857%), Sphingomonas (0.790%), Mycoplana (0.726%), and Pseudomonas (0.688%) were the dominant bacterial genera present in cooled soil. Key soil fungal communities, including Pseudaleuria (18.307%), Phoma (9.968%), Eocronartium (3.527%), Trichosporon (1.791%), and Pyrenochaeta (0.171%), were also recovered from cooled soil. The present results demonstrate that the growth of temperate crops is dependent on soil temperature, which subsequently affects the abundance and diversity of soil microbial communities that maintain the growth of temperate crops at low soil temperatures.

Noel T. Keen--pioneer leader in molecular plant pathology

Noel T. Keen (1940-2002) made pioneering contributions to molecular plant pathology during a period when the study of disease mechanisms was transformed by the new tools of molecular genetics. His primary contributions involved race-specific elicitors of plant defenses and bacterial pectic enzymes. In collaboration with Brian J. Staskawicz and Frances Jurnak, respectively, Noel cloned the first avirulence gene and determined that pectate lyase C possessed a novel structural motif, known as the parallel beta-helix. Noel received his B.S. and M.S. from Iowa State University in Ames and his Ph.D. from the Department of Plant Pathology at the University of Wisconsin in Madison in 1968. He joined the faculty of the Department of Plant Pathology at the University of California at Riverside the same year and remained there his entire career. He served as Chair of the department from 1983 to 1989 and in 1997 assumed the William and Sue Johnson Endowed Chair in Molecular Plant Pathology. He became a Fellow of the American Phytopathological Society in 1991, a Fellow of the American Association for the Advancement of Science in 1996, a Fellow of the American Academy of Microbiology in 1997, and a member of the National Academy of Sciences in 1997. He was serving as President of the American Phytopathological Society (2001-2002) at the time of his death.

Catabolite repression of cellulase biosynthesis in Streptomyces albaduncus

The cellulase complex of S. albaduncus was found to undergo catabolite repression in the presence of glycerol accompanied by a decrease in the pH of the medium. The results of the experiments conducted at two different initial pH of the medium suggested that pH effect as well as proteases were involved in the inactivation of glucanases (exoglucanase and endoglucanase) whereas beta-glucosidase inactivation was solely due to 'pH effect'. It was also apparent that pH change followed by the addition of glycerol caused alterations in protease activities as well as pattern of their production.

Protection of Aspergillus niger cellulases by urea during growth on glucose or glycerol supplemented media

The cellulase enzymes of Aspergillus niger were found to undergo catabolite repression in the presence of glucose and glycerol accompanied by sudden drop in pH of the fermentation medium below 2.0. This sudden drop in pH caused inactivation of cellulolytic enzymes produced by Aspergillus niger. The supplementation of nitrogen sources, especially urea, protects A. niger cellulases from inactivation caused by a sudden drop in pH, since urea helped to maintain the pH of the fermentation medium between 3.5 and 4.5. The role of urea in the protection of cellulase was more prominent when it was used in combination with glycerol (5%).

Optimization of cellulase production by Aspergillus niger NCIM 1207

Aspergillus niger NCIM 1207 produces high levels of extracellular beta-glucosidase and xylanase activities in submerged fermentation. Among the nitrogen sources, ammonium sulfate, ammonium dihydrogen orthophosphate, and corn-steep liquor were the best for the production of cellulolytic enzymes by A. niger. The optimum pH and temperature for cellulase production were 3.0-5.5 and 28 degrees C, respectively. The cellulase complex of this strain was found to undergo catabolite repression in the presence of high concentrations of glucose. Glycerol at all concentrations caused catabolite repression of cellulase production. The addition of glucose (up to 1% concentration) enhanced the production of cellulolytic enzymes, but a higher concentration of glucose effected the pronounced repression of enzymes. Generally the growth on glucose- or glycerol-containing medium was accompanied by a sudden drop in the pH of the fermentation medium to 2.0.

Effect of dithiocarbamates on cellulase activity in culture filtrates of Trichoderma reesei

Different concentrations of tetramethylthiuram disulfide (TMTD), sodium dimethyldithiocarbamate (NaDDC), and zinc dimethyldithiocarbamate (ZnDDC) affected the amount of cellulase(s) activity in the culture of Trichoderma reesei. After eight days incubation at 28 degrees C the greatest increase in Avicelase, CMCase, and beta-glucosidase over the control were observed at 0.1 ppm (TMTD) and 0.4 ppm (NaDDC and ZnDCC). There was decrease in the growth in the ZnDDC, but beta-glucosidase activity was reduced considerably. Total protein in the culture filtrate increased with the increase in cellulase(s) activity. No change in pH was observed at eight days incubation but pH increased (not exceeding 5.9) at 12 days incubation.

Acid phosphatase localization in the fungus Whetzelinia sclerotiorum

Acid phosphatase was localized by light and electron microscopy in chains of vacuoles in hyphal tip cells of Whetzelinia sclerotiorum. The enzyme was present in these vacuoles whether or not conditions favored extracellular acid phosphatase secretion. Apical vesicles, microbodies, Woronin bodies, and lipid bodies did not contain acid phosphatase. The implications regarding terminology of organelles in filamentous fungi are discussed with special reference to the fungal spherosome concept.

Induction and repression of endopolygalacturonase synthesis by Pyrenochaeta terrestris

Endopolygalacturonase (endo-PG) synthesis was inducible in standing and replacement liquid culture by Pyrenochaeta terrestris. Inducers were galacturonic acid, its polymers (pectin and polypectate), and structural relatives (mucic acid, tartronic acid, and dulcitol). On pectin, fungus growth and endo-PG synthesis were proportional to initial pectin concentration.Synthesis of endo-PG on pectin was stimulated by hexose supplements at 0.005 M and repressed by supplements at 0.05 M and above. Thus, repression of induced endo-PG synthesis was not dominant at low supplement concentrations as was found for induced cellulase synthesis by the same organism. This suggests that the production of endo-PG by the parasite during pathogenesis is less repressed by host sugars than is cellulase synthesis.