ECG data dependency for atrial fibrillation detection based on residual networks

Atrial fibrillation (AF) is an arrhythmia that can cause blood clot and may lead to stroke and heart failure. To detect AF, deep learning-based detection algorithms have recently been developed. However, deep learning models were often trained with limited datasets and were evaluated within the same datasets, which makes their performance generally drops on the external datasets, known as data dependency. For this study, three different databases from PhysioNet were used to investigate the data dependency of deep learning-based AF detection algorithm using the residual neural network (Resnet). Resnet 18, 34, 50 and 152 model were trained with raw electrocardiogram (ECG) signal extracted from independent database. The highest accuracy was about 98–99% which is evaluation results of test dataset from the own database. On the other hand, the lowest accuracy was about 53–92% which was evaluation results of the external dataset extracted from different source. There are data dependency according to the train dataset and the test dataset. However, the data dependency decreased as a large amount of train data.

AFCNNet: Automated detection of AF using chirplet transform and deep convolutional bidirectional long short term memory network with ECG signals

Atrial fibrillation (AF) is the most common type of cardiac arrhythmia and is characterized by the heart's beating in an uncoordinated manner. In clinical studies, patients often do not have visible symptoms during AF, and hence it is harder to detect this cardiac ailment. Therefore, automated detection of AF using the electrocardiogram (ECG) signals can reduce the risk of stroke, coronary artery disease, and other cardiovascular complications. In this paper, a novel time-frequency domain deep learning-based approach is proposed to detect AF and classify terminating and non-terminating AF episodes using ECG signals. This approach involves evaluating the time-frequency representation (TFR) of ECG signals using the chirplet transform. The two-dimensional (2D) deep convolutional bidirectional long short-term memory (BLSTM) neural network model is used to detect and classify AF episodes using the time-frequency images of ECG signals. The proposed TFR based 2D deep learning approach is evaluated using the ECG signals from three public databases. Our developed approach has obtained an accuracy, sensitivity, and specificity of 99.18% (Confidence interval (CI) as [98.86, 99.49]), 99.17% (CI as [98.85 99.49]), and 99.18% (CI as [98.86 99.49]), respectively, with 10-fold cross-validation (CV) technique to detect AF automatically. The proposed approach also classified terminating and non-terminating AF episodes with an average accuracy of 75.86%. The average accuracy value obtained using the proposed approach is higher than the short-time Fourier transform (STFT), discrete-time continuous wavelet transform (DT-CWT), and Stockwell transform (ST) based time-frequency analysis methods with deep convolutional BLSTM models to detect AF. The proposed approach has better AF detection performance than the existing deep learning-based techniques using ECG signals from the MIT-BIH database.

Atrial Fibrillation Detection During Sepsis: Study on MIMIC III ICU Data

Sepsis is defined by life-threatening organ dysfunction during infection and is one of the leading causes of critical illness. During sepsis, there is high risk that new-onset of atrial fibrillation (AF) can occur, which is associated with significant morbidity and mortality. As a result, computer aided automated and reliable detection of new-onset AF during sepsis is crucial, especially for the critically ill patients in the intensive care unit (ICU). In this paper, a novel automated and robust two-step algorithm to detect AF from ICU patients using electrocardiogram (ECG) signals is presented. First, several statistical parameters including root mean square of successive differences, Shannon entropy, and sample entropy were calculated from the heart rate for the screening of possible AF segments. Next, Poincaré plot-based features along with P-wave characteristics were used to reduce false positive detection of AF, caused by the premature atrial and ventricular beats. A subset of the Medical Information Mart for Intensive Care (MIMIC) III database containing 198 subjects was used in this study. During the training and validation phases, both the simple thresholding as well as machine learning classifiers achieved very high segment-wise AF classification performance. Finally, we tested the performance of our proposed algorithm using two independent test data sets and compared the performance with two state-of-the-art methods. The algorithm achieved an overall 100% sensitivity, 98% specificity, 98.99% accuracy, 98% positive predictive value, and 100% negative predictive value on the subject-wise AF detection, thus showing the efficacy of our proposed algorithm in critically ill sepsis patients. The annotations of the data have been made publicly available for other investigators.

Detection of Atrial Fibrillation from Single Lead ECG Signal Using Multirate Cosine Filter Bank and Deep Neural Network

Atrial fibrillation (AF) is a cardiac arrhythmia which is characterized based on the irregsular beating of atria, resulting in, the abnormal atrial patterns that are observed in the electrocardiogram (ECG) signal. The early detection of this pathology is very helpful for minimizing the chances of stroke, other heart-related disorders, and coronary artery diseases. This paper proposes a novel method for the detection of AF pathology based on the analysis of the ECG signal. The method adopts a multi-rate cosine filter bank architecture for the evaluation of coefficients from the ECG signal at different subbands, in turn, the Fractional norm (FN) feature is evaluated from the extracted coefficients at each subband. Then, the AF detection is carried out using a deep learning approach known as the Hierarchical Extreme Learning Machine (H-ELM) from the FN features. The proposed method is evaluated by considering normal and AF pathological ECG signals from public databases. The experimental results reveal that the proposed multi-rate cosine filter bank based on FN features is effective for the detection of AF pathology with an accuracy, sensitivity and specificity values of 99.40%, 98.77%, and 100%, respectively. The performance of the proposed diagnostic features of the ECG signal is compared with other existing features for the detection of AF. The low-frequency subband FN features found to be more significant with a difference of the mean values as 0.69 between normal and AF classes.

A Review of Atrial Fibrillation Detection Methods as a Service

Atrial Fibrillation (AF) is a common heart arrhythmia that often goes undetected, and even if it is detected, managing the condition may be challenging. In this paper, we review how the RR interval and Electrocardiogram (ECG) signals, incorporated into a monitoring system, can be useful to track AF events. Were such an automated system to be implemented, it could be used to help manage AF and thereby reduce patient morbidity and mortality. The main impetus behind the idea of developing a service is that a greater data volume analyzed can lead to better patient outcomes. Based on the literature review, which we present herein, we introduce the methods that can be used to detect AF efficiently and automatically via the RR interval and ECG signals. A cardiovascular disease monitoring service that incorporates one or multiple of these detection methods could extend event observation to all times, and could therefore become useful to establish any AF occurrence. The development of an automated and efficient method that monitors AF in real time would likely become a key component for meeting public health goals regarding the reduction of fatalities caused by the disease. Yet, at present, significant technological and regulatory obstacles remain, which prevent the development of any proposed system. Establishment of the scientific foundation for monitoring is important to provide effective service to patients and healthcare professionals.

An incremental learning system for atrial fibrillation detection based on transfer learning and active learning

BACKGROUND AND OBJECTIVE

Atrial fibrillation (AF) is a type of arrhythmia with high incidence. Automatic AF detection methods have been studied in previous works. However, a model cannot be used all the time without any improvement. And updating model requires adequate data and cost. Therefore, this study aims at finding a low-cost way to choose learning samples and developing an incremental learning system for AF detection.

METHODS

Based on transfer learning and active learning, this paper proposed a loop-locked framework integrating AF diagnose, label query, and model fine-tuning. In the pre-training stage, a novel multiple-input deep neural network (MIDNN) is pre-trained using labeled samples from an original training set. In practical application, the model can be used for AF detection. Meanwhile, continuous data is collected to form the candidate set. In the incremental learning stage, the model was fine-tuned continuously by the most informative samples in the candidate set. These samples are selected from the candidate set based on the pre-trained model and a new active learning strategy. The strategy combines the features and the uncertainty of the predicted results.

RESULTS

In order to evaluate the method, the MIT-BIH atrial fibrillation database was used for pre-training and samples of the MIT-BIH arrhythmia database were taken as candidate set. The initial values of Acc, Sen, and PPV were 87.40%, 97.46%, and 81.11%. These indexes reached to the top values of 97.53%, 100.00%, and 95.29% after 14 iterations. Hence, the number of queries was saved by 90.67%.

CONCLUSIONS

The proposed system is able to update the model continuously and reduce the labeling cost over 90%. The comparisons demonstrated the effectiveness of MIDNN model and the suitability of novel learning strategy for AF. Moreover, this framework can be extended to other biomedical applications.

VENTRICULAR TACHYCARDIA AND FIBRILLATION DETECTION USING DWT AND DECISION TREE CLASSIFIER

Ventricular tachycardia (VT) and ventricular fibrillation (VF) are the life-threatening ventricular arrhythmias that require treatment in an emergency. Detection of VT and VF at an early stage is crucial for achieving the success of the defibrillation treatment. Hence an automatic system using computer-aided diagnosis tool is helpful in detecting the ventricular arrhythmias in electrocardiogram (ECG) signal. In this paper, a discrete wavelet transform (DWT) was used to denoise and decompose the ECG signals into different consecutive frequency bands to reduce noise. The methodology was tested using ECG data from standard CU ventricular tachyarrhythmia database (CUDB) and MIT-BIH malignant ventricular ectopy database (VFDB) datasets of PhysioNet databases. A set of time-frequency features consists of temporal, spectral, and statistical were extracted and ranked by the correlation attribute evaluation with ranker search method in order to improve the accuracy of detection. The ranked features were classified for VT and VF conditions using support vector machine (SVM) and decision tree (C4.5) classifier. The proposed DWT based features yielded the average sensitivity of 98%, specificity of 99.32%, and accuracy of 99.23% using a decision tree (C4.5) classifier. These results were better than the SVM classifier having an average accuracy of 92.43%. The obtained results prove that using DWT based time-frequency features with decision tree (C4.5) classifier can be one of the best choices for clinicians for precise detection of ventricular arrhythmias.

A Fusion Frequency Feature Extraction Method for Underwater Acoustic Signal Based on Variational Mode Decomposition, Duffing Chaotic Oscillator and a Kind of Permutation Entropy

In order to effectively extract the frequency characteristics of an underwater acoustic signal under sensor measurement, a fusion frequency feature extraction method for an underwater acoustic signal is presented based on variational mode decomposition (VMD), duffing chaotic oscillator (DCO) and a kind of permutation entropy (PE). Firstly, VMD decomposes the complex multi-component underwater acoustic signal into a set of intrinsic mode functions (IMFs), so as to extract the estimated center frequency of each IMF. Secondly, the frequency of the line spectrum can be obtained by using DCO and a kind of PE (KPE). DCO is used to detect the actual frequency of the line spectrum for each IMF and KPE can determine the accurate frequency when the phase space track is in the great periodic state. Finally, the frequency characteristic parameters acted as the input of the support vector machine (SVM) to distinguish different types of underwater acoustic signals. By comparing with the other three traditional methods for simulation signal and different kinds of underwater acoustic signals, the results show that the proposed method can accurately extract the frequency characteristics and effectively realize the classification and recognition for the underwater acoustic signal.

Analysis for the Influence of ABR Sensitivity on PTT-Based Cuff-Less Blood Pressure Estimation before and after Exercise

An accurate and continuous measurement of blood pressure (BP) is of great importance for the prognosis of some cardiovascular diseases in out-of-hospital settings. Pulse transit time (PTT) is a well-known cardiovascular parameter which is highly correlated with BP and has been widely applied in the estimation of continuous BP. However, due to the complexity of cardiovascular system, the accuracy of PTT-based BP estimation is still unsatisfactory. Recent studies indicate that, for the subjects before and after exercise, PTT can track the high-frequency BP oscillation (HF-BP) well, but is inadequate to follow the low-frequency BP variance (LF-BP). Unfortunately, the cause for this failure of PTT in LF-BP estimation is still unclear. Based on these previous researches, we investigated the cause behind this failure of PTT in LF-BP estimation. The heart rate- (HR-) related arterial baroreflex (ABR) model was introduced to analyze the failure of PTT in LF-BP estimation. Data from 42 healthy volunteers before and after exercise were collected to evaluate the correlation between the ABR sensitivity and the estimation error of PTT-based BP in LF and HF components. In the correlation plot, an obvious difference was observed between the LF and HF groups. The correlation coefficient r for the ABR sensitivity with the estimation error of systolic BP (SBP) and diastolic BP (DBP) in LF was 0.817 ± 0.038 and 0.757 ± 0.069, respectively. However, those correlation coefficient r for the ABR sensitivity with the estimation error of SBP and DBP in HF was only 0.403 ± 0.145 and 0.274 ± 0.154, respectively. These results indicated that there is an ABR-related complex LF autonomic regulation mechanism on BP, PTT, and HR, which influences the effect of PTT in LF-BP estimation.