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Whippo CW, Saliendra NZ, Liebig MA. Cover crop inclusion and residue retention improves soybean production and physiology in drought conditions. Heliyon 2024; 10:e29838. [PMID: 38699707 PMCID: PMC11063448 DOI: 10.1016/j.heliyon.2024.e29838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 04/15/2024] [Accepted: 04/16/2024] [Indexed: 05/05/2024] Open
Abstract
Soybean (Glycine max (L.) Merr.) planting has increased in central and western North Dakota despite frequent drought occurrences that limit productivity. Soybean plants need high photosynthetic and transpiration rates to be productive, but they also need high water use efficiency when water is limited. Crop residues and cover crops in crop rotations may improve soybean drought tolerance in northern Great Plains. We aimed to examine how a management practice that included cover crops and residue retention impacts agronomic, ecosystem water and carbon dioxide flux, and canopy-scale physiological attributes of soybeans in the northern Great Plains under drought conditions. The experiment consisted of two soybean fields over two years with business-as-usual (no-cover crops and spring wheat residue removal) and aspirational management (cover crops and spring wheat residue retention) during a drought year. We compared yield; aboveground biomass; green chromatic coordinates, and CO2 and H2O fluxes from eddy covariance, Phenocam images, and ancillary micrometeorological measurements. These measurements were used to derive ecosystem-scale physical, and physiological attributes with the 'big leaf' framework to diagnose underlying processes. Soybean yields were 29 % higher under drought conditions in the field managed in a system that included cover crops and residue retention. This yield increase was associated with a 5 day increase in the green-chromatic-coordinate defined maturity phenophase, increasing agronomic and intrinsic water use efficiency by 27 % and 33 %, respectively, increasing water uptake, and increasing the rubisco-limited photosynthetic capacity (Vcmax25) by 42 %. The inclusion of cover crops and residue retention into a cropping system improved soybean productivity because of differences in water use, phenology timing, and photosynthetic capacity. These results suggest that farmers can improve soybean productivity and yield stability by incorporating cover crops and residue retention into their management suite because these practices to facilitate more aggressive water uptake.
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Affiliation(s)
- Craig W. Whippo
- USDA-ARS, Northern Great Plains Research Laboratory, P.O. Box 459, Mandan, ND, 58554, USA
| | - Nicanor Z. Saliendra
- USDA-ARS, Northern Great Plains Research Laboratory, P.O. Box 459, Mandan, ND, 58554, USA
| | - Mark A. Liebig
- USDA-ARS, Northern Great Plains Research Laboratory, P.O. Box 459, Mandan, ND, 58554, USA
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Carley CN, Zubrod MJ, Dutta S, Singh AK. Using machine learning enabled phenotyping to characterize nodulation in three early vegetative stages in soybean. CROP SCIENCE 2023; 63:204-226. [PMID: 37503354 PMCID: PMC10369931 DOI: 10.1002/csc2.20861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 09/29/2022] [Indexed: 07/29/2023]
Abstract
The symbiotic relationship between soybean [Glycine max L. (Merr.)] roots and bacteria (Bradyrhizobium japonicum) lead to the development of nodules, important legume root structures where atmospheric nitrogen (N2) is fixed into bio-available ammonia (NH3) for plant growth and development. With the recent development of the Soybean Nodule Acquisition Pipeline (SNAP), nodules can more easily be quantified and evaluated for genetic diversity and growth patterns across unique soybean root system architectures. We explored six diverse soybean genotypes across three field year combinations in three early vegetative stages of development and report the unique relationships between soybean nodules in the taproot and non-taproot growth zones of diverse root system architectures of these genotypes. We found unique growth patterns in the nodules of taproots showing genotypic differences in how nodules grew in count, size, and total nodule area per genotype compared to non-taproot nodules. We propose that nodulation should be defined as a function of both nodule count and individual nodule area resulting in a total nodule area per root or growth regions of the root. We also report on the relationships between the nodules and total nitrogen in the seed at maturity, finding a strong correlation between the taproot nodules and final seed nitrogen at maturity. The applications of these findings could lead to an enhanced understanding of the plant-Bradyrhizobium relationship and exploring these relationships could lead to leveraging greater nitrogen use efficiency and nodulation carbon to nitrogen production efficiency across the soybean germplasm.
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Mulozi L, Vennapusa AR, Elavarthi S, Jacobs OE, Kulkarni KP, Natarajan P, Reddy UK, Melmaiee K. Transcriptome profiling, physiological, and biochemical analyses provide new insights towards drought stress response in sugar maple ( Acer saccharum Marshall) saplings. FRONTIERS IN PLANT SCIENCE 2023; 14:1150204. [PMID: 37152134 PMCID: PMC10154611 DOI: 10.3389/fpls.2023.1150204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Accepted: 03/30/2023] [Indexed: 05/09/2023]
Abstract
Sugar maple (Acer saccharum Marshall) is a temperate tree species in the northeastern parts of the United States and is economically important for its hardwood and syrup production. Sugar maple trees are highly vulnerable to changing climatic conditions, especially drought, so understanding the physiological, biochemical, and molecular responses is critical. The sugar maple saplings were subjected to drought stress for 7, 14, and 21 days and physiological data collected at 7, 14, and 21 days after stress (DAS) showed significantly reduced chlorophyll and Normalized Difference Vegetation Index with increasing drought stress time. The drought stress-induced biochemical changes revealed a higher accumulation of malondialdehyde, proline, and peroxidase activity in response to drought stress. Transcriptome analysis identified a total of 14,099 differentially expressed genes (DEGs); 328 were common among all stress periods. Among the DEGs, transcription factors (including NAC, HSF, ZFPs, GRFs, and ERF), chloroplast-related and stress-responsive genes such as peroxidases, membrane transporters, kinases, and protein detoxifiers were predominant. GO enrichment and KEGG pathway analysis revealed significantly enriched processes related to protein phosphorylation, transmembrane transport, nucleic acids, and metabolic, secondary metabolite biosynthesis pathways, circadian rhythm-plant, and carotenoid biosynthesis in response to drought stress. Time-series transcriptomic analysis revealed changes in gene regulation patterns in eight different clusters, and pathway analysis by individual clusters revealed a hub of stress-responsive pathways. In addition, qRT-PCR validation of selected DEGs revealed that the expression patterns were consistent with transcriptome analysis. The results from this study provide insights into the dynamics of physiological, biochemical, and gene responses to progressive drought stress and reveal the important stress-adaptive mechanisms of sugar maple saplings in response to drought stress.
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Affiliation(s)
- Lungowe Mulozi
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE, United States
| | - Amaranatha R. Vennapusa
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE, United States
| | - Sathya Elavarthi
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE, United States
- *Correspondence: Kalpalatha Melmaiee, ; Sathya Elavarthi,
| | - Oluwatomi E. Jacobs
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE, United States
| | - Krishnanand P. Kulkarni
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE, United States
| | - Purushothaman Natarajan
- Department of Biology and Gus R. Douglass Institute, West Virginia State University, Institute, WV, United States
| | - Umesh K. Reddy
- Department of Biology and Gus R. Douglass Institute, West Virginia State University, Institute, WV, United States
| | - Kalpalatha Melmaiee
- Department of Agriculture and Natural Resources, Delaware State University, Dover, DE, United States
- *Correspondence: Kalpalatha Melmaiee, ; Sathya Elavarthi,
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Jabborova D, Annapurna K, Azimov A, Tyagi S, Pengani KR, Sharma P, Vikram KV, Poczai P, Nasif O, Ansari MJ, Sayyed RZ. Co-inoculation of biochar and arbuscular mycorrhizae for growth promotion and nutrient fortification in soybean under drought conditions. FRONTIERS IN PLANT SCIENCE 2022; 13:947547. [PMID: 35937362 PMCID: PMC9355629 DOI: 10.3389/fpls.2022.947547] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 06/30/2022] [Indexed: 05/23/2023]
Abstract
Drought is significant abiotic stress that affects the development and yield of many crops. The present study is to investigate the effect of arbuscular mycorrhizal fungi (AMF) and biochar on root morphological traits, growth, and physiological traits in soybean under water stress. Impact of AMF and biochar on development and root morphological traits in soybean and AMF spores number and the soil enzymes' activities were studied under drought conditions. After 40 days, plant growth parameters were measured. Drought stress negatively affected soybean growth, root parameters, physiological traits, microbial biomass, and soil enzyme activities. Biochar and AMF individually increase significantly plant growth (plant height, root dry weight, and nodule number), root parameters such as root diameter, root surface area, total root length, root volume, and projected area, total chlorophyll content, and nitrogen content in soybean over to control in water stress. In drought conditions, dual applications of AMF and biochar significantly enhanced shoot and root growth parameters, total chlorophyll, and nitrogen contents in soybean than control. Combined with biochar and AMF positively affects AMF spores number, microbial biomass, and soil enzyme activities in water stress conditions. In drought stress, dual applications of biochar and AMF increase microbial biomass by 28.3%, AMF spores number by 52.0%, alkaline phosphomonoesterase by 45.9%, dehydrogenase by 46.5%, and fluorescein diacetate by 52.2%, activities. The combined application of biochar and AMF enhance growth, root parameters in soybean and soil enzyme activities, and water stress tolerance. Dual applications with biochar and AMF benefit soybean cultivation under water stress conditions.
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Affiliation(s)
- Dilfuza Jabborova
- Institute of Genetics and Plant Experimental Biology, Uzbekistan Academy of Sciences, Tashkent, Uzbekistan
- Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Kannepalli Annapurna
- Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - A. Azimov
- Institute of Genetics and Plant Experimental Biology, Uzbekistan Academy of Sciences, Tashkent, Uzbekistan
| | - Swati Tyagi
- Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | | | - Prakriti Sharma
- Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - K. V. Vikram
- Division of Microbiology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Peter Poczai
- Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Omaima Nasif
- Department of Physiology, College of Medicine and King Khalid University Hospital, King Saud University, Riyadh, Saudi Arabia
| | - Mohammad Javed Ansari
- Department of Botany, Hindu College, Moradabad, Mahatma Jyotiba Phule Rohilkhand University, Bareilly, India
| | - R. Z. Sayyed
- Department of Microbiology, PSGVP Mandal’s S. I. Patil Arts, G. B. Patel Science and S. T. K. V. Sangh Commerce College, Shahada, India
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Byambadorj SO, Park BB, Hernandez JO, Tsedensodnom E, Byambasuren O, Montagnoli A, Chiatante D, Nyam-Osor B. Effects of Irrigation and Fertilization on the Morphophysiological Traits of Populus sibirica Hort. Ex Tausch and Ulmus pumila L. in the Semiarid Steppe Region of Mongolia. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10112407. [PMID: 34834771 PMCID: PMC8620301 DOI: 10.3390/plants10112407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Revised: 10/31/2021] [Accepted: 11/04/2021] [Indexed: 05/07/2023]
Abstract
Desertification is impeding the implementation of reforestation efforts in Mongolia. Many of these efforts have been unsuccessful due to a lack of technical knowledge on water and nutrient management strategies, limited financial support, and short-lived rainfall events. We investigated the effects of irrigation and fertilization on the morphophysiological traits of Populus sibirica Hort. Ex Tausch and Ulmus pumila L. and to suggest irrigation and fertilization strategies for reforestation. Different irrigation and fertilizer treatments were applied: no irrigation, 2 L h-1, 4 L h-1, and 8 L h-1 of water; no fertilizer, 2 L h-1 + NPK, 4 L h-1 + NPK, and 8 L h-1 + NPK; and no compost, 2 L h-1 + compost, 4 L h-1 + compost, and 8 L h-1 + compost. The leaf area (LA) and specific leaf area (SLA) of both species responded positively to 4 and 8 L h-1. Results also showed that the addition of either NPK or compost to 4 or 8 L h-1 irrigation resulted in a higher LA, SLA, and leaf biomass (LB). Total chlorophyll content decreased with irrigation in both species. The same pattern was detected when a higher amount of irrigation was combined with fertilizers. Lastly, we found that both diurnal and seasonal leaf water potential of plants grown in 4 or 8 L h-1 were significantly higher than those of plants grown in control plots. Therefore, 4 or 8 L h-1 with either NPK or compost has shown to be the optimal irrigation and fertilization strategy for the species in an arid and semiarid region of Mongolia. Results should provide us with a better understanding of tree responses to varying amounts of irrigation with or without fertilizer in pursuit of sustainable forest management in arid and semiarid ecosystems.
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Affiliation(s)
- Ser-Oddamba Byambadorj
- Laboratory of Forest Genetics and Ecophysiology, School of Engineering and Applied Sciences, National University of Mongolia, Ulaanbaatar 14201, Mongolia; (S.-O.B.); (E.T.); (O.B.)
- Department of Environment and Forest Resources, College of Agriculture and Life Science, Chungnam National University, Daejeon 34134, Korea
| | - Byung Bae Park
- Department of Environment and Forest Resources, College of Agriculture and Life Science, Chungnam National University, Daejeon 34134, Korea
- Correspondence: (B.B.P.); (B.N.-O.)
| | - Jonathan O. Hernandez
- Department of Forest Biological Sciences, College of Forestry and Natural Resources, University of the Philippines, Los Baños 4031, Philippines;
| | - Enkhchimeg Tsedensodnom
- Laboratory of Forest Genetics and Ecophysiology, School of Engineering and Applied Sciences, National University of Mongolia, Ulaanbaatar 14201, Mongolia; (S.-O.B.); (E.T.); (O.B.)
- Institute of Geography and Geoecology, Mongolian Academy of Sciences, Ulaanbaatar 15170, Mongolia
| | - Otgonsaikhan Byambasuren
- Laboratory of Forest Genetics and Ecophysiology, School of Engineering and Applied Sciences, National University of Mongolia, Ulaanbaatar 14201, Mongolia; (S.-O.B.); (E.T.); (O.B.)
| | - Antonio Montagnoli
- Department of Biotechnology and Life Science, University of Insubria, Via Dunant, 3-21100 Varese, Italy; (A.M.); (D.C.)
| | - Donato Chiatante
- Department of Biotechnology and Life Science, University of Insubria, Via Dunant, 3-21100 Varese, Italy; (A.M.); (D.C.)
| | - Batkhuu Nyam-Osor
- Laboratory of Forest Genetics and Ecophysiology, School of Engineering and Applied Sciences, National University of Mongolia, Ulaanbaatar 14201, Mongolia; (S.-O.B.); (E.T.); (O.B.)
- Correspondence: (B.B.P.); (B.N.-O.)
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Imran M, Latif Khan A, Shahzad R, Aaqil Khan M, Bilal S, Khan A, Kang SM, Lee IJ. Exogenous melatonin induces drought stress tolerance by promoting plant growth and antioxidant defence system of soybean plants. AOB PLANTS 2021; 13:plab026. [PMID: 34234933 PMCID: PMC8255075 DOI: 10.1093/aobpla/plab026] [Citation(s) in RCA: 46] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 06/08/2021] [Indexed: 05/06/2023]
Abstract
Melatonin is an indolamine bioactive molecule that regulates a wide range of physiological processes during plant growth and enhances abiotic stress tolerance. Here we examined the putative role of exogenous melatonin application (foliar or root zone) in improving drought stress tolerance in soybean seedlings. Pre-treatment of soybean seedlings with melatonin (50 and 100 µM) was found to significantly mitigate the negative effects of drought stress on plant growth-related parameters and chlorophyll content. The beneficial impacts against drought were more pronounced by melatonin application in the rhizosphere than in foliar treatments. The melatonin-induced enhanced tolerance could be attributed to improved photosynthetic activity, reduction of abscisic acid and drought-induced oxidative damage by lowering the accumulation of reactive oxygen species and malondialdehyde. Interestingly, the contents of jasmonic acid and salicylic acid were significantly higher following melatonin treatment in the root zone than in foliar treatment compared with the control. The activity of major antioxidant enzymes such as superoxide dismutase, catalase, polyphenol oxidase, peroxidase and ascorbate peroxidase was stimulated by melatonin application. In addition, melatonin counteracted the drought-induced increase in proline and sugar content. These findings revealed that modifying the endogenous plant hormone content and antioxidant enzymes by melatonin application improved drought tolerance in soybean seedlings. Our findings provide evidence for the stronger physiological role of melatonin in the root zone than in leaves, which may be useful in the large-scale field level application during drought.
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Affiliation(s)
- Muhammad Imran
- School of Applied Biosciences, Kyungpook National University, 41566Republic of Korea
| | - Abdul Latif Khan
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Raheem Shahzad
- Department of Horticulture, the University of Haripur, Haripur 21120, Pakistan
| | - Muhammad Aaqil Khan
- School of Applied Biosciences, Kyungpook National University, 41566Republic of Korea
| | - Saqib Bilal
- Natural & Medical Sciences Research Center, University of Nizwa, Nizwa 616, Oman
| | - Adil Khan
- Department of Plant and Soil sciences, Texas Tech University, Lubbock, TX 79409, USA
| | - Sang-Mo Kang
- School of Applied Biosciences, Kyungpook National University, 41566Republic of Korea
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, 41566Republic of Korea
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