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Carey EG, Ridler I, Ford TJ, Stringaris A. Editorial Perspective: When is a 'small effect' actually large and impactful? J Child Psychol Psychiatry 2023; 64:1643-1647. [PMID: 37226639 DOI: 10.1111/jcpp.13817] [Citation(s) in RCA: 18] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 03/19/2023] [Indexed: 05/26/2023]
Abstract
Reporting of effect sizes is standard practice in psychology and psychiatry research. However, interpretation of these effect sizes can be meaningless or misleading - in particular, the evaluation of specific effect sizes as 'small', 'medium' and 'large' can be inaccurate depending on the research context. A real-world example of this is research into the mental health of children and young people during the COVID-19 pandemic. Evidence suggests that clinicians and services are struggling with increased demand, yet population studies looking at the difference in mental health before and during the pandemic report effect sizes that are deemed 'small'. In this short review, we utilise simulations to demonstrate that a relatively small shift in mean scores on mental health measures can indicate a large shift in the number of cases of anxiety and depression when scaled up to an entire population. This shows that 'small' effect sizes can in some contexts be large and impactful.
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Affiliation(s)
- Emma Grace Carey
- Department of Psychiatry, University of Cambridge, Cambridge, UK
| | - Isobel Ridler
- Division of Psychiatry, University College London, London, UK
| | - Tamsin Jane Ford
- Department of Psychiatry, University of Cambridge, Cambridge, UK
| | - Argyris Stringaris
- Division of Psychiatry, University College London, London, UK
- First Dept of Psychiatry, National and Kapodistrian University of Athens, Greece
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Inácio V, Garrido Guillén JE. Bayesian nonparametric inference for the overlap coefficient: With an application to disease diagnosis. Stat Med 2022; 41:3879-3898. [PMID: 35760708 PMCID: PMC9543308 DOI: 10.1002/sim.9480] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Revised: 04/05/2022] [Accepted: 05/06/2016] [Indexed: 11/11/2022]
Abstract
Diagnostic tests play an important role in medical research and clinical practice. The ultimate goal of a diagnostic test is to distinguish between diseased and nondiseased individuals and before a test is routinely used in practice, it is a pivotal requirement that its ability to discriminate between these two states is thoroughly assessed. The overlap coefficient, which is defined as the proportion of overlap area between two probability density functions, has gained popularity as a summary measure of diagnostic accuracy. We propose two Bayesian nonparametric estimators, based on Dirichlet process mixtures, for estimating the overlap coefficient. We further introduce the covariate-specific overlap coefficient and develop a Bayesian nonparametric approach based on Dirichlet process mixtures of additive normal models for estimating it. A simulation study is conducted to assess the empirical performance of our proposed estimators. Two illustrations are provided: one concerned with the search for biomarkers of ovarian cancer and another one aimed to assess the age-specific accuracy of glucose as a biomarker of diabetes.
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Affiliation(s)
- Vanda Inácio
- School of Mathematics, University of Edinburgh, Edinburgh, UK
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Blangero Y, Rabilloud M, Laurent-Puig P, Le Malicot K, Lepage C, Ecochard R, Taieb J, Subtil F. The area between ROC curves, a non-parametric method to evaluate a biomarker for patient treatment selection. Biom J 2020; 62:1476-1493. [PMID: 32346912 DOI: 10.1002/bimj.201900171] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Revised: 09/26/2019] [Accepted: 01/10/2020] [Indexed: 12/19/2022]
Abstract
Treatment selection markers are generally sought for when the benefit of an innovative treatment in comparison with a reference treatment is considered, and this benefit is suspected to vary according to the characteristics of the patients. Classically, such quantitative markers are detected through testing a marker-by-treatment interaction in a parametric regression model. Most alternative methods rely on modeling the risk of event occurrence in each treatment arm or the benefit of the innovative treatment over the marker values, but with assumptions that may be difficult to verify. Herein, a simple non-parametric approach is proposed to detect and assess the general capacity of a quantitative marker for treatment selection when no overall difference in efficacy could be demonstrated between two treatments in a clinical trial. This graphical method relies on the area between treatment-arm-specific receiver operating characteristic curves (ABC), which reflects the treatment selection capacity of the marker. A simulation study assessed the inference properties of the ABC estimator and compared them with other parametric and non-parametric indicators. The simulations showed that the estimate of the ABC had low bias, power comparable to parametric indicators, and that its confidence interval had a good coverage probability (better than the other non-parametric indicator in some cases). Thus, the ABC is a good alternative to parametric indicators. The ABC method was applied to data of the PETACC-8 trial that investigated FOLFOX4 versus FOLFOX4 + cetuximab in stage III colon adenocarcinoma. It enabled the detection of a treatment selection marker: the DDR2 gene.
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Affiliation(s)
- Yoann Blangero
- Service de Biostatistique, Pôle Santé Publique, Hospices Civils de Lyon, Lyon, France.,Université de Lyon, Université Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Evolutive UMR 5558, Villeurbanne, France
| | - Muriel Rabilloud
- Service de Biostatistique, Pôle Santé Publique, Hospices Civils de Lyon, Lyon, France.,Université de Lyon, Université Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Evolutive UMR 5558, Villeurbanne, France
| | - Pierre Laurent-Puig
- Université Paris Descartes, Sorbonne Paris Cité, Paris, France.,Service de génétique, Hôpital Européen Georges Pompidou, Paris, France.,INSERM UMR-S 1147, Paris, France
| | | | - Côme Lepage
- Fédération Francophone de Cancérologie Digestive, Dijon, France.,Hépato-gastroentérologie et cancérologie digestive, Centre hospitalier universitaire Dijon Bourgogne, Dijon, France.,INSERM U 866, Dijon, France
| | - René Ecochard
- Service de Biostatistique, Pôle Santé Publique, Hospices Civils de Lyon, Lyon, France.,Université de Lyon, Université Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Evolutive UMR 5558, Villeurbanne, France
| | - Julien Taieb
- Université Paris Descartes, Sorbonne Paris Cité, Paris, France.,Chirurgie digestive générale et cancérologique, Hôpital Européen Georges Pompidou, Paris, France
| | - Fabien Subtil
- Service de Biostatistique, Pôle Santé Publique, Hospices Civils de Lyon, Lyon, France.,Université de Lyon, Université Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Evolutive UMR 5558, Villeurbanne, France
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