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For: Gao J, Wang X, Zou Z, Jia X, Wang Y, Zhang Z. Transcriptome analysis of the differences in gene expression between testis and ovary in green mud crab (Scylla paramamosain). BMC Genomics 2014;15:585. [PMID: 25015001 PMCID: PMC4124137 DOI: 10.1186/1471-2164-15-585] [Citation(s) in RCA: 72] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2013] [Accepted: 06/30/2014] [Indexed: 12/30/2022]  Open
Number Cited by Other Article(s)
1
Yu Y, Zhang M, Wang D, Xiang Z, Zhao Z, Cui W, Ye S, Fazhan H, Waiho K, Ikhwanuddin M, Ma H. Whole transcriptome RNA sequencing provides novel insights into the molecular dynamics of ovarian development in mud crab, Scylla paramamosain after mating. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. PART D, GENOMICS & PROTEOMICS 2024;51:101247. [PMID: 38788625 DOI: 10.1016/j.cbd.2024.101247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Revised: 05/10/2024] [Accepted: 05/11/2024] [Indexed: 05/26/2024]
2
Huang Y, Lai X, Zhang Z, Peng B, Jia X, Zou Z, Wang Y. Identification and function analysis of steroid hormone synthesis pathway-related gene-Hsd3b in Scylla paramamosain. J Steroid Biochem Mol Biol 2024;241:106529. [PMID: 38670516 DOI: 10.1016/j.jsbmb.2024.106529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/28/2024] [Revised: 04/21/2024] [Accepted: 04/23/2024] [Indexed: 04/28/2024]
3
Wang Q, Lei Y, Lin H, Chen X, Mo W, Guan B, Deng H. Gonadal Transcriptomic Analysis Reveals Novel Sex-Related Genes in Bactrocera dorsalis. INSECTS 2024;15:424. [PMID: 38921139 PMCID: PMC11203884 DOI: 10.3390/insects15060424] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2024] [Revised: 05/15/2024] [Accepted: 05/18/2024] [Indexed: 06/27/2024]
4
Li C, Cai R, Shi W, Zhang H, Liu Z, Xie F, Chen Y, Hong Q. Comparative transcriptome analysis of ovaries and testes reveals sex-biased genes and pathways in zebrafish. Gene 2024;901:148176. [PMID: 38242380 DOI: 10.1016/j.gene.2024.148176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 01/07/2024] [Accepted: 01/16/2024] [Indexed: 01/21/2024]
5
Wang S, Su M, Hu X, Wang X, Han Q, Yu Q, Heděnec P, Li H. Gut diazotrophs in lagomorphs are associated with season but not altitude and host phylogeny. FEMS Microbiol Lett 2024;371:fnad135. [PMID: 38124623 DOI: 10.1093/femsle/fnad135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 11/27/2023] [Accepted: 12/19/2023] [Indexed: 12/23/2023]  Open
6
Liu X, Gao J, Zhang P, Shi T, Yan B, Azra MN, Baloch WA, Wang P, Gao H. De novo transcriptional analysis of the response to starvation stress in the white ridgetail prawn, Exopalaemon carinicauda. Genomics 2023;115:110746. [PMID: 37977333 DOI: 10.1016/j.ygeno.2023.110746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 10/27/2023] [Accepted: 11/14/2023] [Indexed: 11/19/2023]
7
Liu W, Li X, Ma Q, Zhu Y, Zhao W, Yang Y, Xiao W, Huang D, Cai F, Chan DYL, Zhao S, Chu Q. Testis cell pyroptosis mediated by CASP1 and CASP4: possible sertoli cell-only syndrome pathogenesis. Reprod Biol Endocrinol 2023;21:53. [PMID: 37296437 DOI: 10.1186/s12958-023-01101-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 05/11/2023] [Indexed: 06/12/2023]  Open
8
Green S, Bachvaroff T, Sook Chung J. Eyestalk neuropeptide identification in the female red deep-sea crab, Chaceon quinquedens. Gen Comp Endocrinol 2023;330:114128. [PMID: 36152768 DOI: 10.1016/j.ygcen.2022.114128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/21/2021] [Revised: 09/09/2022] [Accepted: 09/16/2022] [Indexed: 12/14/2022]
9
Yang YH, Wang R, Li M, Yang HZ, Huang GH, Ma KY, Qiu GF, Lin Y. Comparative transcriptomes analysis of the ovary reveals potential ovarian development-related genes and pathways in Macrobrachium rosenbergii. INVERTEBR REPROD DEV 2022. [DOI: 10.1080/07924259.2022.2156822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
10
Insulin-like Peptide Receptor (ILPR) in the Cuttlefish Sepiella japonica: Characterization, Expression, and Regulation of Reproduction. Int J Mol Sci 2022;23:ijms232112903. [DOI: 10.3390/ijms232112903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Revised: 10/03/2022] [Accepted: 10/21/2022] [Indexed: 11/16/2022]  Open
11
Gao TH, Han MM, Zhou H, Zhu CX, Yang Y, Zuraini Z, Guo YX, Jiang QC. Effects of berberine hydrochloride on immune response in the crab Charybdis japonica. BMC Genomics 2022;23:578. [PMID: 35953779 PMCID: PMC9373360 DOI: 10.1186/s12864-022-08798-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 07/25/2022] [Indexed: 11/30/2022]  Open
12
Feng Q, Liu M, Cheng Y, Wu X. Comparative Transcriptome Analysis Reveals the Process of Ovarian Development and Nutrition Metabolism in Chinese Mitten Crab, Eriocheir Sinensis. Front Genet 2022;13:910682. [PMID: 35685440 PMCID: PMC9171014 DOI: 10.3389/fgene.2022.910682] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 05/09/2022] [Indexed: 11/13/2022]  Open
13
Jimenez-Gutierrez LR. Female reproduction-specific proteins, origins in marine species, and their evolution in the animal kingdom. J Bioinform Comput Biol 2022;20:2240001. [PMID: 35023815 DOI: 10.1142/s0219720022400017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
14
Li Y, Du X, Liu Z, Zhang M, Huang Y, Tian J, Jiang Q, Zhao Y. Two genes related to reproductive development in the juvenile prawn, Macrobrachium nipponense: Molecular characterization and transcriptional response to nanoplastic exposure. CHEMOSPHERE 2021;281:130827. [PMID: 34015647 DOI: 10.1016/j.chemosphere.2021.130827] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2021] [Revised: 04/11/2021] [Accepted: 05/04/2021] [Indexed: 06/12/2023]
15
Shrestha AMS, I Lilagan CA, B Guiao JE, R Romana-Eguia MR, Ablan Lagman MC. Comparative transcriptome profiling of heat stress response of the mangrove crab Scylla serrata across sites of varying climate profiles. BMC Genomics 2021;22:580. [PMID: 34325654 PMCID: PMC8323281 DOI: 10.1186/s12864-021-07891-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Accepted: 07/14/2021] [Indexed: 11/30/2022]  Open
16
Feng QM, Liu MM, Cheng YX, Wu XG. Comparative proteomics elucidates the dynamics of ovarian development in the Chinese mitten crab Eriocheir sinensis. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2021;40:100878. [PMID: 34333232 DOI: 10.1016/j.cbd.2021.100878] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2021] [Revised: 06/14/2021] [Accepted: 07/05/2021] [Indexed: 11/30/2022]
17
Wan H, Zhong J, Zhang Z, Xie Y, Wang Y. Characterization of the foxl2 gene involved in the vtg expression in mud crab (Scylla paramamosain). Gene 2021;798:145807. [PMID: 34224832 DOI: 10.1016/j.gene.2021.145807] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Revised: 06/24/2021] [Accepted: 06/30/2021] [Indexed: 01/01/2023]
18
Jie YK, Cheng CH, Wang LC, Ma HL, Deng YQ, Liu GX, Feng J, Guo ZX, Ye LT. Hypoxia-induced oxidative stress and transcriptome changes in the mud crab (Scylla paramamosain). Comp Biochem Physiol C Toxicol Pharmacol 2021;245:109039. [PMID: 33785424 DOI: 10.1016/j.cbpc.2021.109039] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 03/04/2021] [Accepted: 03/20/2021] [Indexed: 02/08/2023]
19
Identification of Sex-Related Genes from the Three-Spot Swimming Crab Portunus sanguinolentus and Comparative Analysis with the Crucifix Crab Charybdis feriatus. Animals (Basel) 2021;11:ani11071946. [PMID: 34209957 PMCID: PMC8300171 DOI: 10.3390/ani11071946] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2021] [Revised: 06/12/2021] [Accepted: 06/22/2021] [Indexed: 11/17/2022]  Open
20
Pan Z, Zhu C, Chang G, Wu N, Ding H, Wang H. Differential expression analysis and identification of sex-related genes by gonad transcriptome sequencing in estradiol-treated and non-treated Ussuri catfish Pseudobagrus ussuriensis. FISH PHYSIOLOGY AND BIOCHEMISTRY 2021;47:565-581. [PMID: 33523351 DOI: 10.1007/s10695-021-00932-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2020] [Accepted: 01/25/2021] [Indexed: 06/12/2023]
21
Wan H, Zhong J, Zhang Z, Zou P, Zeng X, Wang Y. Discovery of the Dmrt gene family members based on transcriptome analysis in mud crab Scylla paramamosain. Gene 2021;784:145576. [PMID: 33771605 DOI: 10.1016/j.gene.2021.145576] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 02/15/2021] [Accepted: 03/08/2021] [Indexed: 10/21/2022]
22
Montes-Dominguez AL, Avena-Soto JA, Lizarraga-Rodriguez JL, Perez-Gala RDJ, Jimenez-Gutierrez S, Sotelo-Falomir JA, Pinzon-Miranda FM, Martinez-Perez F, Muñoz-Rubi HA, Chavez-Herrera D, Jimenez-Gutierrez LR. Comparison between cultured and wild Pacific white shrimp (Penaeus vannamei) vitellogenesis: next-generation sequencing and relative expression of genes directly and indirectly related to reproduction. PeerJ 2021;9:e10694. [PMID: 33665004 PMCID: PMC7908874 DOI: 10.7717/peerj.10694] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 12/12/2020] [Indexed: 11/20/2022]  Open
23
Zhou M, Jia X, Wan H, Wang S, Zhang X, Zhang Z, Wang Y. miR-9 and miR-263 Regulate the Key Genes of the ERK Pathway in the Ovary of Mud Crab Scylla paramamosain. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2020;22:594-606. [PMID: 32651722 DOI: 10.1007/s10126-020-09981-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2020] [Accepted: 05/25/2020] [Indexed: 06/11/2023]
24
Saikrithi P, Balasubramanian CP, Otta SK, Tomy S. Expression dynamics of solute carrier family 15 member 4 (SLC15A4) and its potential regulatory role in ovarian development of the Indian white shrimp, Penaeus indicus. Mol Biol Rep 2020;47:3797-3805. [PMID: 32363413 DOI: 10.1007/s11033-020-05471-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2020] [Accepted: 04/25/2020] [Indexed: 10/24/2022]
25
Ye Z, Wang W, Zhang Y, Wang L, Cui Y, Li H. Integrative analysis reveals pathways associated with sex reversal in Cynoglossus semilaevis. PeerJ 2020;8:e8801. [PMID: 32219030 PMCID: PMC7085895 DOI: 10.7717/peerj.8801] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Accepted: 02/25/2020] [Indexed: 12/28/2022]  Open
26
Lou F, Song N, Han Z, Gao T. Single-molecule real-time (SMRT) sequencing facilitates Tachypleus tridentatus genome annotation. Int J Biol Macromol 2020;147:89-97. [PMID: 31923512 DOI: 10.1016/j.ijbiomac.2020.01.029] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Revised: 01/04/2020] [Accepted: 01/04/2020] [Indexed: 12/19/2022]
27
Waiho K, Fazhan H, Zhang Y, Li S, Zhang Y, Zheng H, Ikhwanuddin M, Ma H. Comparative profiling of ovarian and testicular piRNAs in the mud crab Scylla paramamosain. Genomics 2020;112:323-331. [DOI: 10.1016/j.ygeno.2019.02.012] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Revised: 01/10/2019] [Accepted: 02/15/2019] [Indexed: 02/07/2023]
28
Nakeim J, Kornthong N, Saetan J, Duangprom S, Sobhon P, Sretarugsa P. Presence of serotonin and its receptor in the central nervous system and ovary and molecular cloning of the novel crab serotonin receptor of the blue swimming crab, Portunus pelagicus. Acta Histochem 2020;122:151457. [PMID: 31708231 DOI: 10.1016/j.acthis.2019.151457] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2019] [Revised: 10/05/2019] [Accepted: 10/07/2019] [Indexed: 12/19/2022]
29
Liu M, Pan J, Dong Z, Cheng Y, Gong J, Wu X. Comparative transcriptome reveals the potential modulation mechanisms of estradiol affecting ovarian development of female Portunus trituberculatus. PLoS One 2019;14:e0226698. [PMID: 31856263 PMCID: PMC6922394 DOI: 10.1371/journal.pone.0226698] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2019] [Accepted: 12/03/2019] [Indexed: 12/15/2022]  Open
30
González-Castellano I, Manfrin C, Pallavicini A, Martínez-Lage A. De novo gonad transcriptome analysis of the common littoral shrimp Palaemon serratus: novel insights into sex-related genes. BMC Genomics 2019;20:757. [PMID: 31640556 PMCID: PMC6805652 DOI: 10.1186/s12864-019-6157-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Accepted: 10/09/2019] [Indexed: 01/03/2023]  Open
31
Guo W, Lü J, Guo M, Chen S, Qiu B, Sang W, Yang C, Zhang Y, Pan H. De Novo Transcriptome Analysis Reveals Abundant Gonad-specific Genes in the Ovary and Testis of Henosepilachna vigintioctopunctata. Int J Mol Sci 2019;20:ijms20174084. [PMID: 31438553 PMCID: PMC6747241 DOI: 10.3390/ijms20174084] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 08/19/2019] [Accepted: 08/20/2019] [Indexed: 02/06/2023]  Open
32
Waiho K, Shi X, Fazhan H, Li S, Zhang Y, Zheng H, Liu W, Fang S, Ikhwanuddin M, Ma H. High-Density Genetic Linkage Maps Provide Novel Insights Into ZW/ZZ Sex Determination System and Growth Performance in Mud Crab (Scylla paramamosain). Front Genet 2019;10:298. [PMID: 31024620 PMCID: PMC6459939 DOI: 10.3389/fgene.2019.00298] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2018] [Accepted: 03/19/2019] [Indexed: 02/06/2023]  Open
33
Zhao M, Wang W, Chen W, Ma C, Zhang F, Jiang K, Liu J, Diao L, Qian H, Zhao J, Wang T, Ma L. Genome survey, high-resolution genetic linkage map construction, growth-related quantitative trait locus (QTL) identification and gene location in Scylla paramamosain. Sci Rep 2019;9:2910. [PMID: 30814536 PMCID: PMC6393678 DOI: 10.1038/s41598-019-39070-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 01/11/2019] [Indexed: 11/09/2022]  Open
34
Tian R, Yao C, Yang C, Zhu Z, Li C, Zhi E, Wang J, Li P, Chen H, Yuan Q, He Z, Li Z. Fibroblast growth factor-5 promotes spermatogonial stem cell proliferation via ERK and AKT activation. Stem Cell Res Ther 2019;10:40. [PMID: 30670081 PMCID: PMC6343348 DOI: 10.1186/s13287-019-1139-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2018] [Revised: 01/05/2019] [Accepted: 01/07/2019] [Indexed: 12/24/2022]  Open
35
Shi X, Waiho K, Li X, Ikhwanuddin M, Miao G, Lin F, Zhang Y, Li S, Zheng H, Liu W, Aweya JJ, Azmie G, Baylon JC, Quinitio ET, Ma H. Female-specific SNP markers provide insights into a WZ/ZZ sex determination system for mud crabs Scylla paramamosain, S. tranquebarica and S. serrata with a rapid method for genetic sex identification. BMC Genomics 2018;19:981. [PMID: 30594128 PMCID: PMC6311006 DOI: 10.1186/s12864-018-5380-8] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Accepted: 12/16/2018] [Indexed: 12/19/2022]  Open
36
Qin G, Luo W, Tan S, Zhang B, Ma S, Lin Q. Dimorphism of sex and gonad-development-related genes in male and female lined seahorse, Hippocampus erectus, based on transcriptome analyses. Genomics 2018;111:260-266. [PMID: 30445213 DOI: 10.1016/j.ygeno.2018.11.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2018] [Revised: 10/28/2018] [Accepted: 11/09/2018] [Indexed: 02/06/2023]
37
Zhou M, Jia X, Wan H, Wang S, Zhang X, Zhang Z, Wang Y. miR-34 regulates reproduction by inhibiting the expression of MIH, CHH, EcR, and FAMeT genes in mud crab Scylla paramamosain. Mol Reprod Dev 2018;86:122-131. [PMID: 30286264 DOI: 10.1002/mrd.23063] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Accepted: 09/24/2018] [Indexed: 12/16/2022]
38
Zhu F, Qian X, Ma X. Comparative transcriptomic analysis of crab hemocytes in response to white spot syndrome virus or Vibrio alginolyticus infection. FISH & SHELLFISH IMMUNOLOGY 2018;80:165-179. [PMID: 29870828 DOI: 10.1016/j.fsi.2018.06.003] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Revised: 03/26/2018] [Accepted: 06/01/2018] [Indexed: 06/08/2023]
39
Lou F, Yang T, Han Z, Gao T. Transcriptome analysis for identification of candidate genes related to sex determination and growth in Charybdis japonica. Gene 2018;677:10-16. [PMID: 30036655 DOI: 10.1016/j.gene.2018.07.044] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Revised: 07/07/2018] [Accepted: 07/13/2018] [Indexed: 11/27/2022]
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Zhang Y, Miao G, Wu Q, Lin F, You C, Wang S, Aweya JJ, Ma H. Transcriptome sequencing and molecular markers discovery in the gonads of Portunus sanguinolentus. Sci Data 2018;5:180131. [PMID: 29989595 PMCID: PMC6038849 DOI: 10.1038/sdata.2018.131] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Accepted: 05/04/2018] [Indexed: 11/09/2022]  Open
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Jia X, Zhou M, Zou Z, Lin P, Wang Y, Zhang Z. Identification and comparative analysis of the ovary and testis microRNAome of mud crab Scylla paramamosain. Mol Reprod Dev 2018;85:519-531. [DOI: 10.1002/mrd.22989] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Accepted: 04/19/2018] [Indexed: 12/21/2022]
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Zhang Y, Miao G, Fazhan H, Waiho K, Zheng H, Li S, Ikhwanuddin M, Ma H. Transcriptome-seq provides insights into sex-preference pattern of gene expression between testis and ovary of the crucifix crab (Charybdis feriatus). Physiol Genomics 2018;50:393-405. [DOI: 10.1152/physiolgenomics.00016.2018] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
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De novo transcriptome analysis and differentially expressed genes in the ovary and testis of the Japanese mantis shrimp Oratosquilla oratoria by RNA-Seq. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2018;26:69-78. [PMID: 29702368 DOI: 10.1016/j.cbd.2018.04.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2017] [Revised: 03/07/2018] [Accepted: 04/07/2018] [Indexed: 01/15/2023]
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Das S, Shyamal S, Durica DS. Analysis of Annotation and Differential Expression Methods used in RNA-seq Studies in Crustacean Systems. Integr Comp Biol 2018;56:1067-1079. [PMID: 27940611 DOI: 10.1093/icb/icw117] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]  Open
45
Vogt ÉL, Model JFA, Vinagre AS. Effects of Organotins on Crustaceans: Update and Perspectives. Front Endocrinol (Lausanne) 2018;9:65. [PMID: 29535684 PMCID: PMC5835110 DOI: 10.3389/fendo.2018.00065] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/06/2017] [Accepted: 02/13/2018] [Indexed: 12/17/2022]  Open
46
Yang X, Ikhwanuddin M, Li X, Lin F, Wu Q, Zhang Y, You C, Liu W, Cheng Y, Shi X, Wang S, Ma H. Comparative Transcriptome Analysis Provides Insights into Differentially Expressed Genes and Long Non-Coding RNAs between Ovary and Testis of the Mud Crab (Scylla paramamosain). MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2018;20:20-34. [PMID: 29152671 DOI: 10.1007/s10126-017-9784-2] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2017] [Accepted: 11/07/2017] [Indexed: 06/07/2023]
47
Han K, Dai Y, Zhang Z, Zou Z, Wang Y. Molecular Characterization and Expression Profiles of Sp-uchl3 and Sp-uchl5 during Gonad Development of Scylla paramamosain. Molecules 2018;23:molecules23010213. [PMID: 29351241 PMCID: PMC6017914 DOI: 10.3390/molecules23010213] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2017] [Revised: 01/13/2018] [Accepted: 01/15/2018] [Indexed: 12/02/2022]  Open
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Wang Z, Sun L, Guan W, Zhou C, Tang B, Cheng Y, Huang J, Xuan F. De novo transcriptome sequencing and analysis of male and female swimming crab (Portunus trituberculatus) reproductive systems during mating embrace (stage II). BMC Genet 2018;19:3. [PMID: 29298661 PMCID: PMC5753516 DOI: 10.1186/s12863-017-0592-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Accepted: 12/20/2017] [Indexed: 12/17/2022]  Open
49
Liu C, Jia X, Zou Z, Wang X, Wang Y, Zhang Z. VIH from the mud crab is specifically expressed in the eyestalk and potentially regulated by transactivator of Sox9/Oct4/Oct1. Gen Comp Endocrinol 2018;255:1-11. [PMID: 28935584 DOI: 10.1016/j.ygcen.2017.09.018] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/02/2017] [Revised: 08/08/2017] [Accepted: 09/16/2017] [Indexed: 12/30/2022]
50
Jiang Q, Bao C, Yang Y, Liu A, Liu F, Huang H, Ye H. Transcriptome profiling of claw muscle of the mud crab (Scylla paramamosain) at different fattening stages. PLoS One 2017;12:e0188067. [PMID: 29141033 PMCID: PMC5687733 DOI: 10.1371/journal.pone.0188067] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2017] [Accepted: 10/31/2017] [Indexed: 01/29/2023]  Open
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