• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4602587)   Today's Articles (2338)   Subscriber (49368)
For: Sotowa M, Ootsuka K, Kobayashi Y, Hao Y, Tanaka K, Ichitani K, Flowers JM, Purugganan MD, Nakamura I, Sato YI, Sato T, Crayn D, Simon B, Waters DLE, Henry RJ, Ishikawa R. Molecular relationships between Australian annual wild rice, Oryza meridionalis, and two related perennial forms. Rice (N Y) 2013;6:26. [PMID: 24280095 PMCID: PMC3874672 DOI: 10.1186/1939-8433-6-26] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2013] [Accepted: 08/09/2013] [Indexed: 05/02/2023]
Number Cited by Other Article(s)
1
Vinay ND, Singh K, Ellur RK, Chinnusamy V, Jaiswal S, Iquebal MA, Munshi AD, Matsumura H, Boopalakrishnan G, Jat GS, Kole C, Gaikwad AB, Kumar D, Dey SS, Behera TK. High-quality Momordica balsamina genome elucidates its potential use in improving stress resilience and therapeutic properties of bitter gourd. FRONTIERS IN PLANT SCIENCE 2024;14:1258042. [PMID: 38333042 PMCID: PMC10851156 DOI: 10.3389/fpls.2023.1258042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 12/29/2023] [Indexed: 02/10/2024]
2
Hasan S, Furtado A, Henry R. Analysis of Domestication Loci in Wild Rice Populations. PLANTS (BASEL, SWITZERLAND) 2023;12:489. [PMID: 36771574 PMCID: PMC9919211 DOI: 10.3390/plants12030489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 01/04/2023] [Accepted: 01/12/2023] [Indexed: 06/18/2023]
3
Hasan S, Furtado A, Henry R. Gene Expression in the Developing Seed of Wild and Domesticated Rice. Int J Mol Sci 2022;23:13351. [PMID: 36362135 PMCID: PMC9658725 DOI: 10.3390/ijms232113351] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 10/26/2022] [Accepted: 10/27/2022] [Indexed: 01/06/2024]  Open
4
Htet AH, Makabe S, Takahashi H, Samuel PA, Sato YI, Nakamura I. A large deletion within intron 20 sequence of single-copy PolA1 gene as a useful marker for the speciation in Oryza AA-genome species. BREEDING SCIENCE 2022;72:267-273. [PMID: 36408325 PMCID: PMC9653197 DOI: 10.1270/jsbbs.21075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 02/04/2022] [Indexed: 06/16/2023]
5
Abdullah M, Okemo P, Furtado A, Henry R. Potential of Genome Editing to Capture Diversity From Australian Wild Rice Relatives. Front Genome Ed 2022;4:875243. [PMID: 35572739 PMCID: PMC9091330 DOI: 10.3389/fgeed.2022.875243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Accepted: 03/25/2022] [Indexed: 11/13/2022]  Open
6
Hasan S, Furtado A, Henry R. Reticulate Evolution in AA-Genome Wild Rice in Australia. FRONTIERS IN PLANT SCIENCE 2022;13:767635. [PMID: 35360335 PMCID: PMC8963485 DOI: 10.3389/fpls.2022.767635] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 02/04/2022] [Indexed: 06/14/2023]
7
Ichitani K, Toyomoto D, Uemura M, Monda K, Ichikawa M, Henry R, Sato T, Taura S, Ishikawa R. New Hybrid Spikelet Sterility Gene Found in Interspecific Cross between Oryza sativa and O. meridionalis. PLANTS 2022;11:plants11030378. [PMID: 35161359 PMCID: PMC8839173 DOI: 10.3390/plants11030378] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 01/19/2022] [Accepted: 01/24/2022] [Indexed: 11/22/2022]
8
Munguambe NE, Inoue S, Demeter Z, Yamagata Y, Yasui H, Zheng SH, Fujita D. Substitution Mapping of a Locus Responsible for Hybrid Breakdown in Populations Derived From Interspecific Introgression Line. FRONTIERS IN PLANT SCIENCE 2021;12:633247. [PMID: 33968097 PMCID: PMC8097182 DOI: 10.3389/fpls.2021.633247] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Accepted: 03/22/2021] [Indexed: 05/27/2023]
9
Wairich A, de Oliveira BHN, Wu LB, Murugaiyan V, Margis-Pinheiro M, Fett JP, Ricachenevsky FK, Frei M. Chromosomal introgressions from Oryza meridionalis into domesticated rice Oryza sativa result in iron tolerance. JOURNAL OF EXPERIMENTAL BOTANY 2021;72:2242-2259. [PMID: 33035327 DOI: 10.1093/jxb/eraa461] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Accepted: 10/03/2020] [Indexed: 05/07/2023]
10
Moner AM, Furtado A, Henry RJ. Two divergent chloroplast genome sequence clades captured in the domesticated rice gene pool may have significance for rice production. BMC PLANT BIOLOGY 2020;20:472. [PMID: 33054735 PMCID: PMC7558744 DOI: 10.1186/s12870-020-02689-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2020] [Accepted: 10/07/2020] [Indexed: 05/29/2023]
11
Lam DT, Ichitani K, Henry RJ, Ishikawa R. Molecular and Morphological Divergence of Australian Wild Rice. PLANTS 2020;9:plants9020224. [PMID: 32050528 PMCID: PMC7076673 DOI: 10.3390/plants9020224] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Revised: 01/19/2020] [Accepted: 02/04/2020] [Indexed: 11/16/2022]
12
Badro H, Furtado A, Henry R. Relationships between Iraqi Rice Varieties at the Nuclear and Plastid Genome Levels. PLANTS 2019;8:plants8110481. [PMID: 31703353 PMCID: PMC6918272 DOI: 10.3390/plants8110481] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 10/11/2019] [Accepted: 11/05/2019] [Indexed: 01/28/2023]
13
Henry RJ. Australian Wild Rice Populations: A Key Resource for Global Food Security. FRONTIERS IN PLANT SCIENCE 2019;10:1354. [PMID: 31695720 PMCID: PMC6817564 DOI: 10.3389/fpls.2019.01354] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Accepted: 10/01/2019] [Indexed: 05/24/2023]
14
Segregation Distortion Observed in the Progeny of Crosses Between Oryza sativa and O. meridionalis Caused by Abortion During Seed Development. PLANTS 2019;8:plants8100398. [PMID: 31597300 PMCID: PMC6843657 DOI: 10.3390/plants8100398] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Revised: 09/28/2019] [Accepted: 10/03/2019] [Indexed: 12/14/2022]
15
Rawal HC, Kumar PM, Bera B, Singh NK, Mondal TK. Decoding and analysis of organelle genomes of Indian tea (Camellia assamica) for phylogenetic confirmation. Genomics 2019;112:659-668. [PMID: 31029862 DOI: 10.1016/j.ygeno.2019.04.018] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Revised: 03/03/2019] [Accepted: 04/24/2019] [Indexed: 01/16/2023]
16
Lam DT, Buu BC, Lang NT, Toriyama K, Nakamura I, Ishikawa R. Genetic diversity among perennial wild rice Oryza rufipogon Griff., in the Mekong Delta. Ecol Evol 2019;9:2964-2977. [PMID: 30891229 PMCID: PMC6405534 DOI: 10.1002/ece3.4978] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2018] [Revised: 01/16/2019] [Accepted: 01/17/2019] [Indexed: 12/02/2022]  Open
17
Kaewcheenchai R, Promnart U, Soontrajarn K, Chotechuen S, Chitrakon S, Yuki H, Saito S, Sato YI, Ishikawa R. Diverse genetic variation in maternal lineages with high heterogeneity among in situ-conserved wild rice (Oryza rufipogon Griff.) developed in Thailand. BREEDING SCIENCE 2018;68:614-621. [PMID: 30697123 PMCID: PMC6345232 DOI: 10.1270/jsbbs.16105] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2016] [Accepted: 09/18/2018] [Indexed: 06/09/2023]
18
Moner AM, Furtado A, Henry RJ. Chloroplast phylogeography of AA genome rice species. Mol Phylogenet Evol 2018;127:475-487. [DOI: 10.1016/j.ympev.2018.05.002] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2017] [Revised: 02/15/2018] [Accepted: 05/03/2018] [Indexed: 01/08/2023]
19
Moner AM, Furtado A, Chivers I, Fox G, Crayn D, Henry RJ. Diversity and evolution of rice progenitors in Australia. Ecol Evol 2018;8:4360-4366. [PMID: 29721304 PMCID: PMC5916314 DOI: 10.1002/ece3.3989] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2017] [Revised: 01/22/2018] [Accepted: 02/09/2018] [Indexed: 01/19/2023]  Open
20
Brozynska M, Copetti D, Furtado A, Wing RA, Crayn D, Fox G, Ishikawa R, Henry RJ. Sequencing of Australian wild rice genomes reveals ancestral relationships with domesticated rice. PLANT BIOTECHNOLOGY JOURNAL 2017;15:765-774. [PMID: 27889940 PMCID: PMC5425390 DOI: 10.1111/pbi.12674] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2016] [Revised: 10/10/2016] [Accepted: 11/23/2016] [Indexed: 05/04/2023]
21
Kim H, Jung J, Singh N, Greenberg A, Doyle JJ, Tyagi W, Chung JW, Kimball J, Hamilton RS, McCouch SR. Population Dynamics Among six Major Groups of the Oryza rufipogon Species Complex, Wild Relative of Cultivated Asian Rice. RICE (NEW YORK, N.Y.) 2016;9:56. [PMID: 27730519 PMCID: PMC5059230 DOI: 10.1186/s12284-016-0119-0] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Accepted: 09/08/2016] [Indexed: 05/17/2023]
22
Daniell H, Lin CS, Yu M, Chang WJ. Chloroplast genomes: diversity, evolution, and applications in genetic engineering. Genome Biol 2016;17:134. [PMID: 27339192 PMCID: PMC4918201 DOI: 10.1186/s13059-016-1004-2] [Citation(s) in RCA: 716] [Impact Index Per Article: 89.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]  Open
23
Brozynska M, Furtado A, Henry RJ. Genomics of crop wild relatives: expanding the gene pool for crop improvement. PLANT BIOTECHNOLOGY JOURNAL 2016;14:1070-85. [PMID: 26311018 DOI: 10.1111/pbi.12454] [Citation(s) in RCA: 177] [Impact Index Per Article: 22.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2015] [Revised: 06/26/2015] [Accepted: 07/16/2015] [Indexed: 05/20/2023]
24
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R. Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza. Genes Genet Syst 2015;90:269-81. [PMID: 26687860 DOI: 10.1266/ggs.14-00063] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
25
Relationships of wild and domesticated rices (Oryza AA genome species) based upon whole chloroplast genome sequences. Sci Rep 2015;5:13957. [PMID: 26355750 PMCID: PMC4564799 DOI: 10.1038/srep13957] [Citation(s) in RCA: 92] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 08/13/2015] [Indexed: 01/21/2023]  Open
26
Direct chloroplast sequencing: comparison of sequencing platforms and analysis tools for whole chloroplast barcoding. PLoS One 2014;9:e110387. [PMID: 25329378 PMCID: PMC4201551 DOI: 10.1371/journal.pone.0110387] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2014] [Accepted: 09/22/2014] [Indexed: 01/04/2023]  Open
27
Henry RJ, Nevo E. Exploring natural selection to guide breeding for agriculture. PLANT BIOTECHNOLOGY JOURNAL 2014;12:655-62. [PMID: 24975385 DOI: 10.1111/pbi.12215] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2014] [Revised: 04/13/2014] [Accepted: 05/15/2014] [Indexed: 05/02/2023]
28
Brozynska M, Omar ES, Furtado A, Crayn D, Simon B, Ishikawa R, Henry RJ. Chloroplast Genome of Novel Rice Germplasm Identified in Northern Australia. TROPICAL PLANT BIOLOGY 2014;7:111-120. [PMID: 25485030 PMCID: PMC4245483 DOI: 10.1007/s12042-014-9142-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2014] [Accepted: 10/13/2014] [Indexed: 05/04/2023]
29
Henry RJ. Genomics strategies for germplasm characterization and the development of climate resilient crops. FRONTIERS IN PLANT SCIENCE 2014;5:68. [PMID: 24616732 PMCID: PMC3934019 DOI: 10.3389/fpls.2014.00068] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2014] [Accepted: 02/10/2014] [Indexed: 05/05/2023]
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA