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For: Cai Z, Guldbrandtsen B, Lund MS, Sahana G. Prioritizing candidate genes for fertility in dairy cows using gene-based analysis, functional annotation and differential gene expression. BMC Genomics 2019;20:255. [PMID: 30935378 PMCID: PMC6444876 DOI: 10.1186/s12864-019-5638-9] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2018] [Accepted: 03/24/2019] [Indexed: 01/27/2023]  Open
Number Cited by Other Article(s)
1
Akinsola OM, Musa AA, Muansangi L, Singh SP, Mukherjee S, Mukherjee A. Genomic insights into adaptation and inbreeding among Sub-Saharan African cattle from pastoral and agropastoral systems. Front Genet 2024;15:1430291. [PMID: 39119582 PMCID: PMC11306176 DOI: 10.3389/fgene.2024.1430291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Accepted: 07/11/2024] [Indexed: 08/10/2024]  Open
2
Cai Z, Iso-Touru T, Sanchez MP, Kadri N, Bouwman AC, Chitneedi PK, MacLeod IM, Vander Jagt CJ, Chamberlain AJ, Gredler-Grandl B, Spengeler M, Lund MS, Boichard D, Kühn C, Pausch H, Vilkki J, Sahana G. Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance. Genet Sel Evol 2024;56:54. [PMID: 39009986 PMCID: PMC11247842 DOI: 10.1186/s12711-024-00920-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2023] [Accepted: 06/26/2024] [Indexed: 07/17/2024]  Open
3
van den Berg I, Chamberlain AJ, MacLeod IM, Nguyen TV, Goddard ME, Xiang R, Mason B, Meier S, Phyn CVC, Burke CR, Pryce JE. Using expression data to fine map QTL associated with fertility in dairy cattle. Genet Sel Evol 2024;56:42. [PMID: 38844868 PMCID: PMC11154999 DOI: 10.1186/s12711-024-00912-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Accepted: 05/13/2024] [Indexed: 06/09/2024]  Open
4
Rocha RFB, Garcia AO, Dos Santos MG, Otto PI, da Silva MVB, Martins MF, Machado MA, Panetto JCC, Calus MPL, Guimarães SEF. Inheritance of genomic regions and genes associated with number of oocytes and embryos in Gir cattle through daughter design. J Dairy Sci 2024;107:3794-3801. [PMID: 38310969 DOI: 10.3168/jds.2023-24111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Accepted: 12/29/2023] [Indexed: 02/06/2024]
5
Worku D, Verma A. Genetic variation in bovine LAP3 and SIRT1 genes associated with fertility traits in dairy cattle. BMC Genom Data 2024;25:32. [PMID: 38500063 PMCID: PMC10949778 DOI: 10.1186/s12863-024-01209-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 02/15/2024] [Indexed: 03/20/2024]  Open
6
Gangwar M, Kumar S, Ahmad SF, Singh A, Agrawal S, Anitta PL, Kumar A. Identification of genetic variants affecting reproduction traits in Vrindavani cattle. Mamm Genome 2024;35:99-111. [PMID: 37924370 DOI: 10.1007/s00335-023-10023-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 10/08/2023] [Indexed: 11/06/2023]
7
Zhu L, Shen S, Pan C, Lan X, Li J. Bovine FRAS1: mRNA Expression Profile, Genetic Variations, and Significant Correlations with Ovarian Morphological Traits, Mature Follicle, and Corpus Luteum. Animals (Basel) 2024;14:597. [PMID: 38396565 PMCID: PMC10886075 DOI: 10.3390/ani14040597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Revised: 01/29/2024] [Accepted: 02/03/2024] [Indexed: 02/25/2024]  Open
8
Diniz WJS, Afonso J, Kertz NC, Dyce PW, Banerjee P. Mapping Expression Quantitative Trait Loci Targeting Candidate Genes for Pregnancy in Beef Cows. Biomolecules 2024;14:150. [PMID: 38397387 PMCID: PMC10886872 DOI: 10.3390/biom14020150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2023] [Revised: 01/23/2024] [Accepted: 01/24/2024] [Indexed: 02/25/2024]  Open
9
Zhang Y, Plessis C, Prunier J, Martin H, Labrecque R, Sirard MA. DNA methylation profiles in bovine sperm are associated with daughter fertility. Epigenetics 2023;18:2280889. [PMID: 38016027 PMCID: PMC10732624 DOI: 10.1080/15592294.2023.2280889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Accepted: 11/03/2023] [Indexed: 11/30/2023]  Open
10
Luecke SM, Webb EM, Dahlen CR, Reynolds LP, Amat S. Seminal and vagino-uterine microbiome and their individual and interactive effects on cattle fertility. Front Microbiol 2022;13:1029128. [PMID: 36425035 PMCID: PMC9679222 DOI: 10.3389/fmicb.2022.1029128] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Accepted: 10/19/2022] [Indexed: 09/13/2023]  Open
11
Niesen AM, Genther-Schroeder ON, Bradley CMK, Davidson JA, Rossow HA. Peripheral blood mononuclear cell mitochondrial enzyme activity is associated with parity and lactation performance in early lactation Holstein dairy cows. J Dairy Sci 2022;105:7036-7046. [PMID: 35787326 DOI: 10.3168/jds.2021-21599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 04/06/2022] [Indexed: 11/19/2022]
12
Mohammadi A, Alijani S, Rafat S, Abdollahi-Arpanahi R. Single-step genome-wide association study and candidate genes networks affecting reproductive traits in Iranian Holstein cattle. Livest Sci 2022. [DOI: 10.1016/j.livsci.2022.104971] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
13
Du X, He X, Liu Q, Di R, Liu Q, Chu M. Comparative Transcriptomics Reveals the Key lncRNA and mRNA of Sunite Sheep Adrenal Gland Affecting Seasonal Reproduction. Front Vet Sci 2022;9:816241. [PMID: 35464356 PMCID: PMC9024317 DOI: 10.3389/fvets.2022.816241] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Accepted: 03/03/2022] [Indexed: 12/30/2022]  Open
14
Häfliger IM, Spengeler M, Seefried FR, Drögemüller C. Four novel candidate causal variants for deficient homozygous haplotypes in Holstein cattle. Sci Rep 2022;12:5435. [PMID: 35361830 PMCID: PMC8971413 DOI: 10.1038/s41598-022-09403-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 03/07/2022] [Indexed: 12/23/2022]  Open
15
Candidate Genes in Bull Semen Production Traits: An Information Approach Review. Vet Sci 2022;9:vetsci9040155. [PMID: 35448653 PMCID: PMC9028852 DOI: 10.3390/vetsci9040155] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Revised: 03/05/2022] [Accepted: 03/15/2022] [Indexed: 02/05/2023]  Open
16
Cai Z, Christensen OF, Lund MS, Ostersen T, Sahana G. Large-scale association study on daily weight gain in pigs reveals overlap of genetic factors for growth in humans. BMC Genomics 2022;23:133. [PMID: 35168569 PMCID: PMC8845347 DOI: 10.1186/s12864-022-08373-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 02/08/2022] [Indexed: 01/10/2023]  Open
17
Butler ML, Hartman AR, Bormann JM, Weaber RL, Grieger DM, Rolf MM. Genome-wide association study of beef bull semen attributes. BMC Genomics 2022;23:74. [PMID: 35065600 PMCID: PMC8784002 DOI: 10.1186/s12864-021-08256-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Accepted: 12/13/2021] [Indexed: 12/13/2022]  Open
18
Crum TE, Schnabel RD, Decker JE, Taylor JF. Taurine and Indicine Haplotype Representation in Advanced Generation Individuals From Three American Breeds. Front Genet 2021;12:758394. [PMID: 34733318 PMCID: PMC8558500 DOI: 10.3389/fgene.2021.758394] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Accepted: 09/27/2021] [Indexed: 11/14/2022]  Open
19
Demenkov PS, Oshchepkova ЕА, Demenkov PS, Ivanisenko TV, Ivanisenko VA. Prioritization of biological processes based on the reconstruction and analysis of associative gene networks describing the response of plants to adverse environmental factors. Vavilovskii Zhurnal Genet Selektsii 2021;25:580-592. [PMID: 34723066 PMCID: PMC8543060 DOI: 10.18699/vj21.065] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Revised: 06/21/2021] [Accepted: 06/21/2021] [Indexed: 11/23/2022]  Open
20
Klein SL, Yin T, Swalve HH, König S. Single-step genomic best linear unbiased predictor genetic parameter estimations and genome-wide associations for milk fatty acid profiles, interval from calving to first insemination, and ketosis in Holstein cattle. J Dairy Sci 2021;104:10921-10933. [PMID: 34334206 DOI: 10.3168/jds.2021-20416] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2021] [Accepted: 06/15/2021] [Indexed: 11/19/2022]
21
Fertility-Associated Polymorphism within Bovine ITGβ5 and Its Significant Correlations with Ovarian and Luteal Traits. Animals (Basel) 2021;11:ani11061579. [PMID: 34071201 PMCID: PMC8228251 DOI: 10.3390/ani11061579] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 05/25/2021] [Accepted: 05/26/2021] [Indexed: 12/14/2022]  Open
22
Macciotta NPP, Colli L, Cesarani A, Ajmone-Marsan P, Low WY, Tearle R, Williams JL. The distribution of runs of homozygosity in the genome of river and swamp buffaloes reveals a history of adaptation, migration and crossbred events. Genet Sel Evol 2021;53:20. [PMID: 33639853 PMCID: PMC7912491 DOI: 10.1186/s12711-021-00616-3] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Accepted: 02/17/2021] [Indexed: 01/03/2023]  Open
23
da Cruz AS, Silva DC, Minasi LB, de Farias Teixeira LK, Rodrigues FM, da Silva CC, do Carmo AS, da Silva MVGB, Utsunomiya YT, Garcia JF, da Cruz AD. Single-Nucleotide Polymorphism Variations Associated With Specific Genes Putatively Identified Enhanced Genetic Predisposition for 305-Day Milk Yield in the Girolando Crossbreed. Front Genet 2021;11:573344. [PMID: 33584786 PMCID: PMC7876550 DOI: 10.3389/fgene.2020.573344] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 12/07/2020] [Indexed: 01/18/2023]  Open
24
Cai Z, Sarup P, Ostersen T, Nielsen B, Fredholm M, Karlskov-Mortensen P, Sørensen P, Jensen J, Guldbrandtsen B, Lund MS, Christensen OF, Sahana G. Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds. J Anim Sci 2020;98:5873883. [PMID: 32687196 DOI: 10.1093/jas/skaa229] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Accepted: 07/14/2020] [Indexed: 01/04/2023]  Open
25
Khan MZ, Khan A, Xiao J, Ma Y, Ma J, Gao J, Cao Z. Role of the JAK-STAT Pathway in Bovine Mastitis and Milk Production. Animals (Basel) 2020;10:ani10112107. [PMID: 33202860 PMCID: PMC7697124 DOI: 10.3390/ani10112107] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Revised: 10/21/2020] [Accepted: 11/05/2020] [Indexed: 12/23/2022]  Open
26
Stolpovsky YA, Piskunov AK, Svishcheva GR. Genomic Selection. I: Latest Trends and Possible Ways of Development. RUSS J GENET+ 2020. [DOI: 10.1134/s1022795420090148] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
27
Li J, Shen C, Zhang K, Niu Z, Liu Z, Zhang S, Wang Y, Lan X. Polymorphic variants of bovine ADCY5 gene identified in GWAS analysis were significantly associated with ovarian morphological related traits. Gene 2020;766:145158. [PMID: 32949694 DOI: 10.1016/j.gene.2020.145158] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Revised: 08/19/2020] [Accepted: 09/11/2020] [Indexed: 12/12/2022]
28
Kiyici JM, Akyüz B, Kaliber M, Arslan K, Aksel EG, Cinar MU. Association of GH, STAT5A, MYF5 gene polymorphisms with milk somatic cell count, EC and pH levels of Holstein dairy cattle. Anim Biotechnol 2020;33:401-407. [PMID: 32749185 DOI: 10.1080/10495398.2020.1800483] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
29
Genome-Wide Association Study and Pathway Analysis for Female Fertility Traits in Iranian Holstein Cattle. ANNALS OF ANIMAL SCIENCE 2020. [DOI: 10.2478/aoas-2020-0031] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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