1
|
Mei LC, Chen HM, Dong AY, Huang GY, Liu YW, Zhang X, Wang W, Hao GF, Yang GF. Pesticide Informatics Platform (PIP): An International Platform for Pesticide Discovery, Residue, and Risk Evaluation. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:6617-6623. [PMID: 35617526 DOI: 10.1021/acs.jafc.2c02141] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Pesticides are widely used agrochemicals for crop protection. The need for novel pesticides becomes urgent as a result of the emergence of resistance and environmental toxicity. Pesticide informatics has been applied in different phase processes of pesticide target identification, active ingredient design, and impact evaluation. However, these valuable resources are scattered over the literature and web, limiting their availability. Here, we summarize and connect research on pesticide informatics resources. A pesticide informatics platform (PIP) was constructed to share these tools. We finally discuss the future direction of pesticide informatics, including pesticide contamination. We expect to share the pesticide informatics approaches and stimulate further research.
Collapse
Affiliation(s)
- Long-Can Mei
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, Hubei 430079, People's Republic of China
| | - Hui-Min Chen
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, Hubei 430079, People's Republic of China
| | - An-Yu Dong
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang, Guizhou 550000, People's Republic of China
| | - Guang-Yi Huang
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, Hubei 430079, People's Republic of China
| | - Ying-Wei Liu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang, Guizhou 550000, People's Republic of China
| | - Xiao Zhang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang, Guizhou 550000, People's Republic of China
| | - Wei Wang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang, Guizhou 550000, People's Republic of China
| | - Ge-Fei Hao
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, Hubei 430079, People's Republic of China
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang, Guizhou 550000, People's Republic of China
| | - Guang-Fu Yang
- Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan, Hubei 430079, People's Republic of China
| |
Collapse
|
2
|
Corcoran J, Goodman CL, Saathoff S, Ringbauer JA, Guo Y, Bonning B, Stanley D. Cell lines derived from the small hive beetle, Aethina tumida, express insecticide targets. In Vitro Cell Dev Biol Anim 2021; 57:849-855. [PMID: 34792733 DOI: 10.1007/s11626-021-00633-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Accepted: 11/05/2021] [Indexed: 10/19/2022]
Affiliation(s)
- Jacob Corcoran
- Biological Control of Insects Research Laboratory, USDA - Agricultural Research Service, 1503 S. Providence Rd, Columbia, MO, 65203, USA.
| | - Cynthia L Goodman
- Biological Control of Insects Research Laboratory, USDA - Agricultural Research Service, 1503 S. Providence Rd, Columbia, MO, 65203, USA
| | - Stephen Saathoff
- Biological Control of Insects Research Laboratory, USDA - Agricultural Research Service, 1503 S. Providence Rd, Columbia, MO, 65203, USA
| | - Joseph A Ringbauer
- Biological Control of Insects Research Laboratory, USDA - Agricultural Research Service, 1503 S. Providence Rd, Columbia, MO, 65203, USA
| | - Ya Guo
- Entomology and Nematology Department, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL, USA
| | - Bryony Bonning
- Entomology and Nematology Department, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, FL, USA
| | - David Stanley
- Biological Control of Insects Research Laboratory, USDA - Agricultural Research Service, 1503 S. Providence Rd, Columbia, MO, 65203, USA
| |
Collapse
|
3
|
Jones AK, Goven D, Froger JA, Bantz A, Raymond V. The cys-loop ligand-gated ion channel gene superfamilies of the cockroaches Blattella germanica and Periplaneta americana. PEST MANAGEMENT SCIENCE 2021; 77:3787-3799. [PMID: 33347700 DOI: 10.1002/ps.6245] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Revised: 11/27/2020] [Accepted: 12/21/2020] [Indexed: 06/12/2023]
Abstract
BACKGROUND Cockroaches are serious urban pests that can transfer disease-causing microorganisms as well as trigger allergic reactions and asthma. They are commonly managed by pesticides that act on cys-loop ligand-gated ion channels (cysLGIC). To provide further information that will enhance our understanding of how insecticides act on their molecular targets in cockroaches, we used genome and reverse transcriptase polymerase chain reaction (RT-PCR) data to characterize the cysLGIC gene superfamilies from Blattella germanica and Periplaneta americana. RESULTS The B. germanica and P. americana cysLGIC superfamilies consist of 30 and 32 subunit-encoding genes, respectively, which are the largest insect cysLGIC superfamilies characterized to date. As with other insects, the cockroaches possess ion channels predicted to be gated by acetylcholine, γ-aminobutyric acid, glutamate and histamine, as well as orthologues of the drosophila pH-sensitive chloride channel (pHCl), CG8916 and CG12344. The large cysLGIC superfamilies of cockroaches are a result of an expanded number of divergent nicotinic acetylcholine receptor subunits, with B. germanica and P. americana, respectively, possessing eight and ten subunit genes. Diversity of the cockroach cysLGICs is also broadened by alternative splicing and RNA A-to-I editing. Unusually, both cockroach species possess a second glutamate-gated chloride channel as well as another CG8916 subunit. CONCLUSION These findings on B. germanica and P. americana enhance our understanding of the evolution of the insect cysLGIC superfamily and provide a useful basis for the study of their function, the detection and management of insecticide resistance, and for the development of improved pesticides with greater specificity towards these major pests. © 2020 Society of Chemical Industry.
Collapse
Affiliation(s)
- Andrew K Jones
- Department of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford, UK
| | - Delphine Goven
- Laboratoire « Signalisation Fonctionnelle des Canaux Ioniques et Récepteurs » (SiFCIR), UPRES-EA2647 USC INRAE 1330, SFR 4207 QUASAV, UFR Sciences, Université d'Angers, Angers, France
| | - Josy-Anne Froger
- Laboratoire « Signalisation Fonctionnelle des Canaux Ioniques et Récepteurs » (SiFCIR), UPRES-EA2647 USC INRAE 1330, SFR 4207 QUASAV, UFR Sciences, Université d'Angers, Angers, France
| | - Alexandre Bantz
- Laboratoire « Signalisation Fonctionnelle des Canaux Ioniques et Récepteurs » (SiFCIR), UPRES-EA2647 USC INRAE 1330, SFR 4207 QUASAV, UFR Sciences, Université d'Angers, Angers, France
| | - Valerie Raymond
- Laboratoire « Signalisation Fonctionnelle des Canaux Ioniques et Récepteurs » (SiFCIR), UPRES-EA2647 USC INRAE 1330, SFR 4207 QUASAV, UFR Sciences, Université d'Angers, Angers, France
| |
Collapse
|