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Wrzesińska-Krupa B, Obrępalska-Stęplowska A. Small non-coding satellite RNAs - the 'game changers' at the virus-host plant interaction? Biol Rev Camb Philos Soc 2025; 100:19-34. [PMID: 39054260 DOI: 10.1111/brv.13125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2024] [Revised: 07/03/2024] [Accepted: 07/19/2024] [Indexed: 07/27/2024]
Abstract
Satellite RNAs (satRNAs) are RNA molecules associated with many plant viruses and fully dependent on them for replication, encapsidation, and movement within the plant or transmission from plant to plant. Their classification is based on their length, functional protein-coding capacity, and RNA structure (whether linear or circular). They have been of interest for a long time as some of them, in particular systems, cause significant changes in the pathogenesis and epidemiology of plant viruses. The outcomes of how satRNAs affect pathogenesis depend on the components of the pathosystem: host plant species or variety, virus species or even strain, and the sequence of satRNA. These can be additionally affected by biotic and abiotic factors, for example, environmental conditions such as the presence of their vectors or ambient temperature. satRNAs may interfere with primary metabolism, signalling, plant defence [including post-transcriptional gene silencing (PTGS)], as well as the efficiency of virus transmission from plant to plant. In recent years, due to wider access to high-throughput technologies and the extension of studies on satRNAs to include the involvement of external factors in plant-virus-satRNA systems, we are gaining a broader view of the consequences of the presence of these small molecules in viral infections. This review presents the state of the art of satRNA interactions with the helper virus and host plant as well as the influence of satRNAs on the insect vector's behaviour. Moreover, areas requiring further research are identified and knowledge gaps indicated.
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Affiliation(s)
- Barbara Wrzesińska-Krupa
- Department of Molecular Biology and Biotechnology, Institute of Plant Protection - National Research Institute, Władysława Węgorka 20, Poznań, 60-318, Poland
| | - Aleksandra Obrępalska-Stęplowska
- Department of Molecular Biology and Biotechnology, Institute of Plant Protection - National Research Institute, Władysława Węgorka 20, Poznań, 60-318, Poland
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Hussain MD, Farooq T, Kamran A, Basit A, Wang Y, Smagghe G, Chen X. Endosymbionts as hidden players in tripartite pathosystem of interactions and potential candidates for sustainable viral disease management. Crit Rev Biotechnol 2025:1-23. [PMID: 39848650 DOI: 10.1080/07388551.2024.2449403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2024] [Revised: 11/26/2024] [Accepted: 12/02/2024] [Indexed: 01/25/2025]
Abstract
The convoluted relationships between plants, viruses, and arthropod vectors housing bacterial endosymbionts are pivotal in the spread of harmful plant viral diseases. Endosymbionts play key roles in: manipulating host responses, influencing insect resistance to pesticides, shaping insect evolution, and bolstering virus acquisition, retention, and transmission. This interplay presents an innovative approach for developing sustainable strategies to manage plant diseases. Recent progress in targeting specific endosymbionts through genetic modifications, biotechnological advancements, and RNA interference shows potential for curbing viral spread and disease progression. Additionally, employing synthetic biology techniques like CRISPR/Cas9 to engineer endosymbionts and disrupt crucial interactions necessary for viral transmission in arthropod vectors holds promise for effective control measures. In this review, these obligate and facultative bacterial cruxes have been discussed to elaborate on their mechanistic involvement in the regulation and/or inhibition of tripartite pathways of interactions. Furthermore, we provide an in-depth understanding of endosymbionts' synergistic and antagonistic effects on: insect biology, plant immunity, and virus acquisition and transmission. Finally, we point out open questions for future research and provide research directions concerning the deployment of genetically engineered symbionts to affect plant-virus-vector interactions for sustainable disease management. By addressing existing knowledge gaps and charting future research paths, a deeper comprehension of the role of endosymbionts in plant-virus-vector interactions can pave the way for innovative and successful disease management strategies. The exploration of antiviral therapies, paratransgenesis, and pathogen-blocking tactics using engineered endosymbionts introduces pioneering solutions for lessening the impact of plant viral diseases and green pest management.
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Affiliation(s)
- Muhammad Dilshad Hussain
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, P.R. China
| | - Tahir Farooq
- Plant Protection Research Institute and Guangdong Provincial Key Laboratory of High Technology for Plant Protection, Guangdong Academy of Agricultural Sciences, Guangzhou, P.R. China
| | - Ali Kamran
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, P.R. China
| | - Abdul Basit
- Institute of Entomology, Guizhou University, Guiyang, P.R. China
| | - Yong Wang
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, P.R. China
- Institute of Plant Health and Medicine, College of Agriculture, Guizhou University, Guiyang, P.R. China
| | - Guy Smagghe
- Institute of Entomology, Guizhou University, Guiyang, P.R. China
- Cellular and Molecular Life Sciences, Department of Biology, Vrije Universiteit Brussel (VUB), Brussels, Belgium
- Department of Plants and Crops, Ghent University, Ghent, Belgium
| | - Xiangru Chen
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, P.R. China
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Ullah I, Toor MD, Yerlikaya BA, Mohamed HI, Yerlikaya S, Basit A, Rehman AU. High-temperature stress in strawberry: understanding physiological, biochemical and molecular responses. PLANTA 2024; 260:118. [PMID: 39419853 DOI: 10.1007/s00425-024-04544-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Accepted: 09/30/2024] [Indexed: 10/19/2024]
Abstract
MAIN CONCLUSION Heat stress reduces strawberry growth and fruit quality by impairing photosynthesis, disrupting hormone regulation, and altering mineral nutrition. Multi-omics studies show extensive transcriptional, post-transcriptional, proteomic and metabolomic under high temperatures. Garden strawberry is a globally cultivated, economically important fruit crop highly susceptible to episodic heat waves and chronically rising temperatures associated with climate change. Heat stress negatively affects the growth, development, and quality of strawberries. Elevated temperatures affect photosynthesis, respiration, water balance, hormone signaling, and carbohydrate metabolism in strawberries. Heat stress reduces the size and number of leaves, the number of crowns, the differentiation of flower buds, and the viability of pollen and fruit set, ultimately leading to a lower yield. On a physiological level, heat stress reduces membrane stability, increases the production of reactive oxygen species, and reduces the antioxidant capacity of strawberries. Heat-tolerant varieties have better physiological and biochemical adaptation mechanisms compared to heat-sensitive varieties. Breeding heat-tolerant strawberry cultivars involves selection for traits such as increased leaf temperature, membrane thermostability, and chlorophyll content. Multi-omics studies show extensive transcriptional, post-transcriptional, proteomic, metabolomic, and ionomic reprogramming at high temperatures. Integrative-omics approaches combine multiple omics datasets to obtain a systemic understanding of the responses to heat stress in strawberries. This article summarizes the deciphering of strawberry responses to heat stress using physiological, biochemical, and molecular approaches that will enable the development of resilient adaptation strategies that sustain strawberry production under global climate change.
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Affiliation(s)
- Izhar Ullah
- Department of Horticulture, Faculty of Agriculture, Ondokuz Mayis University, Samsun, Turkey
| | - Muhammad Danish Toor
- Department of Botany, Faculty of Science and Technology, İnstitute of Ecology and Earth Science's, Chair of Mycology, University of Tartu, Tartu, Estonia
- Department of Agrochemistry and Soil Science, Faculty of Agronomy, Agricultural University, Plovdiv, Bulgaria
| | - Bayram Ali Yerlikaya
- Department of Plant Biotechnology, Faculty of Agriculture, Ondokuz Mayis University, Samsun, Turkey
| | - Heba I Mohamed
- Department of Biological and Geological Sciences, Faculty of Education, Ain Shams University, Cairo, Egypt.
| | - Seher Yerlikaya
- Department of Plant Biotechnology, Faculty of Agriculture, Ondokuz Mayis University, Samsun, Turkey
| | - Abdul Basit
- Department of Horticultural Science, Kyungpook National University, 41566, Daegu, South Korea
| | - Attiq Ur Rehman
- Department of Agricultural Sciences, Faculty of Agriculture and Forestry, The University of Helsinki, 00790, Helsinki, Finland
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Zhou L, Wang E, Yang Y, Yang P, Xu L, Ming J. Antioxidant Enzyme, Transcriptomic, and Metabolomic Changes in Lily ( Lilium spp.) Leaves Induced by Aphis gossypii Glover. Genes (Basel) 2024; 15:1124. [PMID: 39336715 PMCID: PMC11431739 DOI: 10.3390/genes15091124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2024] [Revised: 08/24/2024] [Accepted: 08/25/2024] [Indexed: 09/30/2024] Open
Abstract
Cotton aphids (Aphis gossypii Glover) cause harm by feeding on phloem sap and spreading plant viruses to lily. Understanding the mechanisms by which aphids infest lily plants is crucial for effective aphid management and control. In this study, we investigated the activity of antioxidants, integrated nontargeted metabolomes and transcriptomes of lilies infested by cotton aphids to explore the changes in lily leaves. Overall, the results indicated that the catalase (CAT) activity in the leaves of the lily plants was greater than that in the leaves of the control plants. A comprehensive identification of 604 substances was conducted in the leaves. Furthermore, the differentially abundant metabolite analysis revealed the enrichment of phenylalanine metabolism and α-linolenic acid metabolism. Moreover, 3574 differentially expressed genes (DEGs), whose expression tended to increase, were linked to glutathione metabolism and phenylpropanoid biosynthesis. In addition, the integrated analysis revealed that the defensive response of lily leaves to aphids is manifested through antioxidant reactions, phenylpropane and flavonoid biosynthesis, and α-linolenic acid metabolism. Finally, the key metabolites were CAT, glutathione, coumaric acid, and jasmonic acid, along with the key genes chalcone synthase (CHS), phenylalanine ammonia-lyase (PAL), and 12-oxo-phytodienoic acid reductase (OPR). Accordingly, the findings of this research elucidate the molecular and metabolic reactions of A. gossypii in lily plants, offering valuable insights for developing aphid resistance strategies in lily farming.
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Affiliation(s)
- Lihong Zhou
- State Key Laboratory of Vegetable Biobreeding, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (L.Z.); (P.Y.); (L.X.)
- Flower Institution, Liaoning Academy of Agricultural Sciences, Shenyang 110161, China;
| | - Erli Wang
- Plant Protection College, Shenyang Agricultural University, Shenyang 110866, China;
| | - Yingdong Yang
- Flower Institution, Liaoning Academy of Agricultural Sciences, Shenyang 110161, China;
| | - Panpan Yang
- State Key Laboratory of Vegetable Biobreeding, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (L.Z.); (P.Y.); (L.X.)
| | - Leifeng Xu
- State Key Laboratory of Vegetable Biobreeding, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (L.Z.); (P.Y.); (L.X.)
| | - Jun Ming
- State Key Laboratory of Vegetable Biobreeding, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (L.Z.); (P.Y.); (L.X.)
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Hoffmann AA, Cooper BS. Describing endosymbiont-host interactions within the parasitism-mutualism continuum. Ecol Evol 2024; 14:e11705. [PMID: 38975267 PMCID: PMC11224498 DOI: 10.1002/ece3.11705] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2024] [Accepted: 06/21/2024] [Indexed: 07/09/2024] Open
Abstract
Endosymbionts are widespread in arthropods, living in host cells with effects that extend from parasitic to mutualistic. Newly acquired endosymbionts tend to be parasitic, but vertical transmission favors coevolution toward mutualism, with hosts sometimes developing dependency. Endosymbionts negatively affecting host fitness may still spread by impacting host reproductive traits, referred to as reproductive "manipulation," although costs for hosts are often assumed rather than demonstrated. For cytoplasmic incompatibility (CI) that involves endosymbiont-mediated embryo death, theory predicts directional shifts away from "manipulation" toward reduced CI strength; moreover, CI-causing endosymbionts need to increase host fitness to initially spread. In nature, endosymbiont-host interactions and dynamics are complex, often depending on environmental conditions and evolutionary history. We advocate for capturing this complexity through appropriate datasets, rather than relying on terms like "manipulation." Such imprecision can lead to the misclassification of endosymbionts along the parasitism-mutualism continuum.
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Affiliation(s)
- Ary A. Hoffmann
- Pest and Environmental Adaptation Research Group, School of BioSciences, Bio21 InstituteUniversity of MelbourneParkvilleVictoriaAustralia
| | - Brandon S. Cooper
- Division of Biological SciencesUniversity of MontanaMissoulaMontanaUSA
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Sanches P, De Moraes CM, Mescher MC. Endosymbionts modulate virus effects on aphid-plant interactions. THE ISME JOURNAL 2023; 17:2441-2451. [PMID: 37980433 PMCID: PMC10689485 DOI: 10.1038/s41396-023-01549-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Revised: 10/11/2023] [Accepted: 10/17/2023] [Indexed: 11/20/2023]
Abstract
Vector-borne pathogens frequently modify traits of their primary hosts and vectors in ways that influence disease transmission. Such effects can themselves be altered by the presence of other microbial symbionts, yet we currently have limited understanding of these interactions. Here we show that effects of pea enation mosaic virus (PEMV) on interactions between host plants and aphid vectors are modulated by the presence of different aphid endosymbionts. In a series of laboratory assays, we found strong interactive effects of virus infection and endosymbionts on aphid metabolomic profiles, population growth, behavior, and virus transmission during aphid feeding. Furthermore, the strongest effects-and those predicted to favor virus transmission-were most apparent in aphid lines harboring particular endosymbionts. These findings show that virus effects on host-vector interactions can be strongly influenced by other microbial symbionts and suggest a potentially important role for such interactions in disease ecology and evolution.
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Affiliation(s)
- Patricia Sanches
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
| | | | - Mark C Mescher
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland.
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Zhang J, Huang J, Tang Y, Lu Y, Zhou Z. Construction of a Banker Plant System via the Host Switch Trait of a Natural Enemy Aenasius bambawalei. Life (Basel) 2023; 13:2115. [PMID: 38004255 PMCID: PMC10672032 DOI: 10.3390/life13112115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Revised: 10/08/2023] [Accepted: 10/11/2023] [Indexed: 11/26/2023] Open
Abstract
Understanding the most effective host switch patterns in parasitic wasps, specifically Aenasius bambawalei (AB), is crucial for effectively controlling pests like Penacoccus solenopsis (PSS). This study aims to elucidate AB's ideal host switch pattern and assess its utility in maintaining synchronization between AB and PSS, thereby aiding in PSS control. We examined various host switch patterns and cycles to evaluate their impact on AB's offspring's parasitism rates and fitness in laboratory conditions. Concurrently, we assessed the fitness of both PSS and AB on tomato plants using different banker plant systems to maintain field synchronization. Results indicate that the three-repeat T1 host switch pattern of PSS-Penacoccus solani (PSI)-PSS was the most effective. Additionally, a specific banker plant system, "System B", which provided succulent plants hosting PSI, was optimal for synchronizing AB and PSS in a summer greenhouse setting. Our findings underscore the importance of employing specific host switch patterns and banker plant systems to effectively control PSS in the field. This research offers foundational data for incorporating a banker plant system into integrated pest management strategies for enhanced PSS control.
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Affiliation(s)
- Juan Zhang
- Institute of Garden Plants and Flowers, Zhejiang Academy of Agricultural Sciences, Hangzhou 311251, China; (J.Z.); (Y.T.)
| | - Jun Huang
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agricultural Products, Key Laboratory of Biotechnology in Plant Protection of MOA of China and Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China;
| | - Yayuan Tang
- Institute of Garden Plants and Flowers, Zhejiang Academy of Agricultural Sciences, Hangzhou 311251, China; (J.Z.); (Y.T.)
- College of Forestry and Biotechnology, Zhejiang A & F University, Hangzhou 311300, China
| | - Yaobin Lu
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agricultural Products, Key Laboratory of Biotechnology in Plant Protection of MOA of China and Zhejiang Province, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China;
| | - Zhongshi Zhou
- Institute of Plant Protection, Chinease Academy of Agricultural Sciences, Beijing 100193, China
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Chen S, Zhou A, Xu Y. Symbiotic Bacteria Regulating Insect-Insect/Fungus/Virus Mutualism. INSECTS 2023; 14:741. [PMID: 37754709 PMCID: PMC10531535 DOI: 10.3390/insects14090741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 07/25/2023] [Accepted: 09/02/2023] [Indexed: 09/28/2023]
Abstract
Bacteria associated with insects potentially provide many beneficial services and have been well documented. Mutualism that relates to insects is widespread in ecosystems. However, the interrelation between "symbiotic bacteria" and "mutualism" has rarely been studied. We introduce three systems of mutualism that relate to insects (ants and honeydew-producing Hemiptera, fungus-growing insects and fungi, and plant persistent viruses and vector insects) and review the species of symbiotic bacteria in host insects, as well as their functions in host insects and the mechanisms underlying mutualism regulation. A deeper understanding of the molecular mechanisms and role of symbiotic bacteria, based on metagenomics, transcriptomics, proteomics, metabolomics, and microbiology, will be required for describing the entire interaction network.
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Affiliation(s)
- Siqi Chen
- Red Imported Fire Ant Research Center, South China Agricultural University, Guangzhou 510642, China;
| | - Aiming Zhou
- Hubei Insect Resources Utilization and Sustainable Pest Management, Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - Yijuan Xu
- Red Imported Fire Ant Research Center, South China Agricultural University, Guangzhou 510642, China;
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Wu W, Shan HW, Li JM, Zhang CX, Chen JP, Mao Q. Roles of Bacterial Symbionts in Transmission of Plant Virus by Hemipteran Vectors. Front Microbiol 2022; 13:805352. [PMID: 35154053 PMCID: PMC8829006 DOI: 10.3389/fmicb.2022.805352] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2021] [Accepted: 01/03/2022] [Indexed: 11/13/2022] Open
Abstract
The majority of plant viruses are transmitted by hemipteran insects. Bacterial symbionts in hemipteran hosts have a significant impact on the host life, physiology and ecology. Recently, the involvement of bacterial symbionts in hemipteran vector-virus and vector-plant interactions has been documented. Thus, the exploitation and manipulation of bacterial symbionts have great potential for plant viral disease control. Herein, we review the studies performed on the impact of symbiotic bacteria on plant virus transmission, including insect-bacterial symbiont associations, the role of these bacterial symbionts in viral acquisition, stability and release during viral circulation in insect bodies, and in viral vertical transmission. Besides, we prospect further studies aimed to understand tripartite interactions of the virus-symbiotic microorganisms-insect vector.
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